2024-12-07 16:14:30,925 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-07 16:14:31,231 Running on GPU
2024-12-07 16:14:34,347 Found 6 citations for tools or databases
2024-12-07 16:14:34,347 Query 1/1: RBBP4_MTF2 (length 1018)
2024-12-07 16:14:34,628 Sleeping for 6s. Reason: PENDING
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2024-12-07 16:15:19,430 Sleeping for 9s. Reason: RUNNING
2024-12-07 16:15:28,685 Sleeping for 8s. Reason: RUNNING
2024-12-07 16:15:36,948 Sleeping for 6s. Reason: RUNNING
2024-12-07 16:15:43,208 Sleeping for 8s. Reason: RUNNING
2024-12-07 16:15:51,464 Sleeping for 10s. Reason: RUNNING
2024-12-07 16:16:01,724 Sleeping for 8s. Reason: RUNNING
2024-12-07 16:16:09,991 Sleeping for 9s. Reason: RUNNING
2024-12-07 16:16:19,250 Sleeping for 10s. Reason: RUNNING
2024-12-07 16:16:29,508 Sleeping for 9s. Reason: RUNNING
2024-12-07 16:16:38,765 Sleeping for 7s. Reason: RUNNING
2024-12-07 16:16:46,027 Sleeping for 10s. Reason: RUNNING
2024-12-07 16:16:56,288 Sleeping for 6s. Reason: RUNNING
2024-12-07 16:17:02,544 Sleeping for 10s. Reason: RUNNING
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2024-12-07 16:17:21,063 Sleeping for 5s. Reason: RUNNING
2024-12-07 16:17:26,325 Sleeping for 6s. Reason: RUNNING
2024-12-07 16:17:32,585 Sleeping for 8s. Reason: RUNNING
2024-12-07 16:17:43,368 Sleeping for 9s. Reason: PENDING
2024-12-07 16:17:52,625 Sleeping for 5s. Reason: RUNNING
2024-12-07 16:17:57,882 Sleeping for 6s. Reason: RUNNING
2024-12-07 16:18:04,142 Sleeping for 5s. Reason: RUNNING
2024-12-07 16:18:09,394 Sleeping for 6s. Reason: RUNNING
2024-12-07 16:18:15,649 Sleeping for 6s. Reason: RUNNING
2024-12-07 16:18:21,902 Sleeping for 8s. Reason: RUNNING
2024-12-07 16:18:30,166 Sleeping for 10s. Reason: RUNNING
2024-12-07 16:18:40,428 Sleeping for 5s. Reason: RUNNING
2024-12-07 16:18:45,684 Sleeping for 7s. Reason: RUNNING
2024-12-07 16:18:52,945 Sleeping for 10s. Reason: RUNNING
2024-12-07 16:19:03,214 Sleeping for 8s. Reason: RUNNING
2024-12-07 16:19:11,476 Sleeping for 6s. Reason: RUNNING
2024-12-07 16:19:17,730 Sleeping for 6s. Reason: RUNNING
2024-12-07 16:19:24,143 Sleeping for 5s. Reason: RUNNING
2024-12-07 16:19:32,495 Setting max_seq=508, max_extra_seq=2048
2024-12-07 16:22:17,918 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=64.8 pTM=0.479 ipTM=0.288
2024-12-07 16:22:39,653 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=66.8 pTM=0.478 ipTM=0.373 tol=12.8
2024-12-07 16:23:01,464 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=67.9 pTM=0.479 ipTM=0.322 tol=5.73
2024-12-07 16:23:23,319 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=68.1 pTM=0.48 ipTM=0.3 tol=4.21
2024-12-07 16:23:45,217 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=68.2 pTM=0.479 ipTM=0.354 tol=6.01
2024-12-07 16:24:07,125 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=68.5 pTM=0.483 ipTM=0.404 tol=5.8
2024-12-07 16:24:29,039 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=67.9 pTM=0.479 ipTM=0.319 tol=2.88
2024-12-07 16:24:50,979 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=67.9 pTM=0.48 ipTM=0.333 tol=3.3
2024-12-07 16:25:12,944 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=68.1 pTM=0.482 ipTM=0.361 tol=3.49
2024-12-07 16:25:34,902 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=67.9 pTM=0.484 ipTM=0.36 tol=5.46
2024-12-07 16:25:56,865 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=67.9 pTM=0.478 ipTM=0.313 tol=4.4
2024-12-07 16:26:18,830 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=67.8 pTM=0.476 ipTM=0.297 tol=5.23
2024-12-07 16:26:40,779 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=67.8 pTM=0.477 ipTM=0.324 tol=4.38
2024-12-07 16:27:02,720 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=67.9 pTM=0.48 ipTM=0.404 tol=5.68
2024-12-07 16:27:24,685 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=67.7 pTM=0.475 ipTM=0.301 tol=5.65
2024-12-07 16:27:46,672 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=67.8 pTM=0.478 ipTM=0.324 tol=3.89
2024-12-07 16:28:08,615 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=67.7 pTM=0.479 ipTM=0.36 tol=4.98
2024-12-07 16:28:30,592 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=67.8 pTM=0.482 ipTM=0.369 tol=6.54
2024-12-07 16:28:52,554 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=67.6 pTM=0.48 ipTM=0.367 tol=3.94
2024-12-07 16:29:14,513 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=67.5 pTM=0.477 ipTM=0.316 tol=3.89
2024-12-07 16:29:36,468 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=67.5 pTM=0.475 ipTM=0.311 tol=4.65
2024-12-07 16:29:58,437 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=67.8 pTM=0.48 ipTM=0.36 tol=4.39
2024-12-07 16:30:20,431 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=67.8 pTM=0.48 ipTM=0.399 tol=4.61
2024-12-07 16:30:42,409 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=67.6 pTM=0.475 ipTM=0.305 tol=3.87
2024-12-07 16:31:04,379 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=67.9 pTM=0.481 ipTM=0.371 tol=6.17
2024-12-07 16:31:26,362 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=68 pTM=0.48 ipTM=0.354 tol=4.23
2024-12-07 16:31:48,341 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=67.6 pTM=0.476 ipTM=0.31 tol=3.12
2024-12-07 16:32:10,313 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=67.8 pTM=0.48 ipTM=0.395 tol=3.34
2024-12-07 16:32:32,315 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=67.9 pTM=0.477 ipTM=0.36 tol=4.25
2024-12-07 16:32:54,322 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=67.4 pTM=0.476 ipTM=0.3 tol=4.68
2024-12-07 16:33:16,323 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=67.6 pTM=0.475 ipTM=0.289 tol=3.51
2024-12-07 16:33:16,324 alphafold2_multimer_v3_model_1_seed_000 took 818.9s (30 recycles)
2024-12-07 16:33:38,974 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=65.1 pTM=0.473 ipTM=0.244
2024-12-07 16:34:01,037 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=67.1 pTM=0.466 ipTM=0.294 tol=11.7
2024-12-07 16:34:23,120 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=67.6 pTM=0.469 ipTM=0.309 tol=16.7
2024-12-07 16:34:45,168 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=68.6 pTM=0.487 ipTM=0.373 tol=7.59
2024-12-07 16:35:07,218 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=68.4 pTM=0.477 ipTM=0.312 tol=3.89
2024-12-07 16:35:29,284 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=68.5 pTM=0.479 ipTM=0.329 tol=2.4
2024-12-07 16:35:51,346 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=68.3 pTM=0.478 ipTM=0.302 tol=1.2
2024-12-07 16:36:13,408 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=68.4 pTM=0.481 ipTM=0.317 tol=1.53
2024-12-07 16:36:35,499 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=68.4 pTM=0.477 ipTM=0.307 tol=1.74
2024-12-07 16:36:57,578 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=68.4 pTM=0.48 ipTM=0.317 tol=1.58
2024-12-07 16:37:19,652 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=68.4 pTM=0.475 ipTM=0.321 tol=2.68
2024-12-07 16:37:41,716 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=68.5 pTM=0.477 ipTM=0.312 tol=2.91
2024-12-07 16:38:03,796 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=68.4 pTM=0.474 ipTM=0.275 tol=4.71
2024-12-07 16:38:25,884 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=68.6 pTM=0.475 ipTM=0.334 tol=4.31
2024-12-07 16:38:47,955 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=68.5 pTM=0.477 ipTM=0.33 tol=1.51
2024-12-07 16:39:10,041 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=68.4 pTM=0.47 ipTM=0.285 tol=2.29
2024-12-07 16:39:32,141 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=68.4 pTM=0.475 ipTM=0.327 tol=1.42
2024-12-07 16:39:54,226 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=68.6 pTM=0.474 ipTM=0.314 tol=1.58
2024-12-07 16:40:16,296 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=68.3 pTM=0.47 ipTM=0.268 tol=1.77
2024-12-07 16:40:38,372 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=68.3 pTM=0.476 ipTM=0.311 tol=1.24
2024-12-07 16:41:00,444 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=68.3 pTM=0.476 ipTM=0.305 tol=4.15
2024-12-07 16:41:22,496 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=68.4 pTM=0.473 ipTM=0.283 tol=4.53
2024-12-07 16:41:44,551 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=68.4 pTM=0.477 ipTM=0.345 tol=2.2
2024-12-07 16:42:06,609 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=68.6 pTM=0.477 ipTM=0.323 tol=2.19
2024-12-07 16:42:28,664 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=68.3 pTM=0.474 ipTM=0.274 tol=1.47
2024-12-07 16:42:50,722 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=68.5 pTM=0.475 ipTM=0.307 tol=1.49
2024-12-07 16:43:12,778 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=68.2 pTM=0.475 ipTM=0.32 tol=2.22
2024-12-07 16:43:34,835 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=68.3 pTM=0.468 ipTM=0.275 tol=2.62
2024-12-07 16:43:56,902 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=68.4 pTM=0.474 ipTM=0.297 tol=1.96
2024-12-07 16:44:18,951 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=68.4 pTM=0.471 ipTM=0.294 tol=1.16
2024-12-07 16:44:40,998 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=68.3 pTM=0.472 ipTM=0.258 tol=1.17
2024-12-07 16:44:40,999 alphafold2_multimer_v3_model_2_seed_000 took 684.0s (30 recycles)
2024-12-07 16:45:03,711 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=64.9 pTM=0.495 ipTM=0.316
2024-12-07 16:45:25,835 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=66.5 pTM=0.467 ipTM=0.21 tol=14.5
2024-12-07 16:45:47,908 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=66.8 pTM=0.463 ipTM=0.198 tol=12.8
2024-12-07 16:46:10,033 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=67.9 pTM=0.499 ipTM=0.318 tol=15.1
2024-12-07 16:46:32,143 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=67.8 pTM=0.467 ipTM=0.232 tol=10.4
2024-12-07 16:46:54,209 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=67.4 pTM=0.476 ipTM=0.229 tol=14.8
2024-12-07 16:47:16,307 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=68.1 pTM=0.475 ipTM=0.246 tol=6.73
2024-12-07 16:47:38,397 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=68.1 pTM=0.481 ipTM=0.251 tol=7.1
2024-12-07 16:48:00,492 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=68.1 pTM=0.472 ipTM=0.239 tol=6.66
2024-12-07 16:48:22,554 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=67.8 pTM=0.484 ipTM=0.271 tol=10.6
2024-12-07 16:48:44,657 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=68.1 pTM=0.466 ipTM=0.214 tol=5.79
2024-12-07 16:49:06,752 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=67.9 pTM=0.471 ipTM=0.223 tol=8.38
2024-12-07 16:49:28,834 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=68.1 pTM=0.474 ipTM=0.245 tol=6.68
2024-12-07 16:49:50,900 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=68.1 pTM=0.493 ipTM=0.287 tol=5.19
2024-12-07 16:50:12,997 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=68.1 pTM=0.473 ipTM=0.242 tol=5.88
2024-12-07 16:50:35,048 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=68.1 pTM=0.497 ipTM=0.29 tol=4.5
2024-12-07 16:50:57,116 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=68.2 pTM=0.473 ipTM=0.249 tol=2.95
2024-12-07 16:51:19,171 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=67.9 pTM=0.486 ipTM=0.264 tol=7.4
2024-12-07 16:51:41,252 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=67.9 pTM=0.473 ipTM=0.227 tol=4.57
2024-12-07 16:52:03,290 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=67.9 pTM=0.497 ipTM=0.304 tol=3.75
2024-12-07 16:52:25,352 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=67.9 pTM=0.476 ipTM=0.269 tol=6.92
2024-12-07 16:52:47,340 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=67.9 pTM=0.495 ipTM=0.284 tol=9.09
2024-12-07 16:53:09,403 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=67.9 pTM=0.475 ipTM=0.247 tol=5.71
2024-12-07 16:53:31,466 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=67.6 pTM=0.479 ipTM=0.252 tol=5.45
2024-12-07 16:53:53,548 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=67.8 pTM=0.471 ipTM=0.248 tol=4.28
2024-12-07 16:54:15,594 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=67.7 pTM=0.482 ipTM=0.252 tol=8.12
2024-12-07 16:54:37,671 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=67.5 pTM=0.465 ipTM=0.218 tol=5.21
2024-12-07 16:54:59,761 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=67.6 pTM=0.467 ipTM=0.218 tol=8.88
2024-12-07 16:55:21,867 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=67.8 pTM=0.471 ipTM=0.239 tol=7.79
2024-12-07 16:55:43,990 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=67.9 pTM=0.493 ipTM=0.283 tol=6.57
2024-12-07 16:56:06,048 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=67.9 pTM=0.476 ipTM=0.265 tol=6.59
2024-12-07 16:56:06,049 alphafold2_multimer_v3_model_3_seed_000 took 684.4s (30 recycles)
2024-12-07 16:56:28,722 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=64.5 pTM=0.478 ipTM=0.235
2024-12-07 16:56:50,783 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=65.8 pTM=0.592 ipTM=0.615 tol=12.9
2024-12-07 16:57:12,866 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=66.9 pTM=0.464 ipTM=0.238 tol=15.4
2024-12-07 16:57:34,893 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=67.3 pTM=0.465 ipTM=0.244 tol=5.64
2024-12-07 16:57:56,953 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=66.8 pTM=0.463 ipTM=0.23 tol=6.54
2024-12-07 16:58:18,974 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=67.8 pTM=0.484 ipTM=0.275 tol=6.82
2024-12-07 16:58:41,037 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=66.7 pTM=0.455 ipTM=0.177 tol=6.92
2024-12-07 16:59:03,077 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=67.1 pTM=0.46 ipTM=0.192 tol=5.67
2024-12-07 16:59:25,101 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=67.1 pTM=0.46 ipTM=0.202 tol=4.18
2024-12-07 16:59:47,122 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=66.9 pTM=0.46 ipTM=0.188 tol=4.02
2024-12-07 17:00:09,153 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=67.1 pTM=0.458 ipTM=0.214 tol=4.89
2024-12-07 17:00:31,215 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=66.6 pTM=0.463 ipTM=0.208 tol=5
2024-12-07 17:00:53,289 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=67 pTM=0.456 ipTM=0.192 tol=4.51
2024-12-07 17:01:15,345 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=66.8 pTM=0.46 ipTM=0.186 tol=4.41
2024-12-07 17:01:37,415 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=67.1 pTM=0.456 ipTM=0.205 tol=4.95
2024-12-07 17:01:59,467 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=66.7 pTM=0.457 ipTM=0.193 tol=5.16
2024-12-07 17:02:21,538 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=66.9 pTM=0.457 ipTM=0.223 tol=4.98
2024-12-07 17:02:43,607 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=66.9 pTM=0.46 ipTM=0.23 tol=3.97
2024-12-07 17:03:05,640 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=66.7 pTM=0.464 ipTM=0.229 tol=3.71
2024-12-07 17:03:27,703 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=66.8 pTM=0.459 ipTM=0.192 tol=5.73
2024-12-07 17:03:49,785 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=66.6 pTM=0.455 ipTM=0.183 tol=4.16
2024-12-07 17:04:11,821 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=66.6 pTM=0.459 ipTM=0.205 tol=3.5
2024-12-07 17:04:33,909 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=66.8 pTM=0.457 ipTM=0.217 tol=5.34
2024-12-07 17:04:55,953 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=66.7 pTM=0.459 ipTM=0.204 tol=4.51
2024-12-07 17:05:18,020 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=67.1 pTM=0.458 ipTM=0.2 tol=3.37
2024-12-07 17:05:40,082 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=67.1 pTM=0.461 ipTM=0.219 tol=4.06
2024-12-07 17:06:02,128 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=66.9 pTM=0.457 ipTM=0.224 tol=4.4
2024-12-07 17:06:24,180 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=66.8 pTM=0.459 ipTM=0.236 tol=4.27
2024-12-07 17:06:46,268 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=66.9 pTM=0.457 ipTM=0.216 tol=3.77
2024-12-07 17:07:08,318 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=66.4 pTM=0.46 ipTM=0.225 tol=4.33
2024-12-07 17:07:30,382 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=66.8 pTM=0.455 ipTM=0.198 tol=3.79
2024-12-07 17:07:30,382 alphafold2_multimer_v3_model_4_seed_000 took 683.7s (30 recycles)
2024-12-07 17:07:53,067 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=64.9 pTM=0.486 ipTM=0.287
2024-12-07 17:08:15,174 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=66.3 pTM=0.454 ipTM=0.168 tol=15.4
2024-12-07 17:08:37,251 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=68.1 pTM=0.528 ipTM=0.469 tol=12.3
2024-12-07 17:08:59,312 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=68.3 pTM=0.516 ipTM=0.44 tol=9
2024-12-07 17:09:21,467 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=67.8 pTM=0.464 ipTM=0.209 tol=5.44
2024-12-07 17:09:43,582 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=67.8 pTM=0.477 ipTM=0.263 tol=3.57
2024-12-07 17:10:05,719 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=67.5 pTM=0.464 ipTM=0.212 tol=4.35
2024-12-07 17:10:27,825 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=67.6 pTM=0.499 ipTM=0.389 tol=7.69
2024-12-07 17:10:49,959 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=67.7 pTM=0.464 ipTM=0.207 tol=4.85
2024-12-07 17:11:12,077 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=67.6 pTM=0.469 ipTM=0.235 tol=3.1
2024-12-07 17:11:34,256 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=67.6 pTM=0.456 ipTM=0.189 tol=6.34
2024-12-07 17:11:56,422 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=67.1 pTM=0.459 ipTM=0.201 tol=5.56
2024-12-07 17:12:18,586 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=67.4 pTM=0.462 ipTM=0.21 tol=5.41
2024-12-07 17:12:40,718 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=67.4 pTM=0.465 ipTM=0.208 tol=6.05
2024-12-07 17:13:02,879 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=67.2 pTM=0.465 ipTM=0.218 tol=6.1
2024-12-07 17:13:25,065 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=67.1 pTM=0.453 ipTM=0.175 tol=6.87
2024-12-07 17:13:47,193 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=67.9 pTM=0.496 ipTM=0.351 tol=10.2
2024-12-07 17:14:09,323 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=67.7 pTM=0.465 ipTM=0.239 tol=6.01
2024-12-07 17:14:31,454 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=67.2 pTM=0.468 ipTM=0.232 tol=7
2024-12-07 17:14:53,642 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=67.4 pTM=0.453 ipTM=0.168 tol=6.7
2024-12-07 17:15:15,818 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=67.4 pTM=0.457 ipTM=0.191 tol=7.91
2024-12-07 17:15:37,960 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=67.3 pTM=0.463 ipTM=0.203 tol=7.26
2024-12-07 17:16:00,098 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=67.4 pTM=0.468 ipTM=0.221 tol=6.2
2024-12-07 17:16:22,248 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=67.1 pTM=0.458 ipTM=0.2 tol=6.74
2024-12-07 17:16:44,407 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=67.3 pTM=0.463 ipTM=0.216 tol=5.05
2024-12-07 17:17:06,612 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=67.2 pTM=0.45 ipTM=0.168 tol=6.91
2024-12-07 17:17:28,767 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=67.1 pTM=0.46 ipTM=0.191 tol=6.95
2024-12-07 17:17:50,901 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=67.4 pTM=0.458 ipTM=0.188 tol=5.36
2024-12-07 17:18:13,057 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=67.2 pTM=0.463 ipTM=0.208 tol=3.53
2024-12-07 17:18:35,216 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=67.2 pTM=0.455 ipTM=0.175 tol=4.35
2024-12-07 17:18:57,372 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=67.1 pTM=0.461 ipTM=0.202 tol=4.54
2024-12-07 17:18:57,372 alphafold2_multimer_v3_model_5_seed_000 took 686.4s (30 recycles)
2024-12-07 17:18:58,007 reranking models by 'multimer' metric
2024-12-07 17:19:01,226 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-07 17:20:45,057 Relaxation took 107.0s
2024-12-07 17:20:45,057 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=67.6 pTM=0.475 ipTM=0.289
2024-12-07 17:22:15,226 Relaxation took 90.2s
2024-12-07 17:22:15,226 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=67.9 pTM=0.476 ipTM=0.265
2024-12-07 17:24:03,516 Relaxation took 108.3s
2024-12-07 17:24:03,516 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=68.3 pTM=0.472 ipTM=0.258
2024-12-07 17:25:29,601 Relaxation took 86.1s
2024-12-07 17:25:29,601 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=67.1 pTM=0.461 ipTM=0.202
2024-12-07 17:27:07,673 Relaxation took 98.1s
2024-12-07 17:27:07,673 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=66.8 pTM=0.455 ipTM=0.198
2024-12-07 17:27:09,578 Done