2024-12-07 16:19:51,701 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-07 16:19:52,027 Running on GPU
2024-12-07 16:19:55,196 Found 6 citations for tools or databases
2024-12-07 16:19:55,196 Query 1/1: RBBP4_PWWP2B (length 1015)
2024-12-07 16:19:55,486 Sleeping for 9s. Reason: PENDING
2024-12-07 16:20:04,746 Sleeping for 5s. Reason: RUNNING
2024-12-07 16:20:10,010 Sleeping for 10s. Reason: RUNNING
2024-12-07 16:20:20,275 Sleeping for 6s. Reason: RUNNING
2024-12-07 16:20:26,531 Sleeping for 8s. Reason: RUNNING
2024-12-07 16:20:34,788 Sleeping for 6s. Reason: RUNNING
2024-12-07 16:20:41,043 Sleeping for 10s. Reason: RUNNING
2024-12-07 16:20:51,302 Sleeping for 6s. Reason: RUNNING
2024-12-07 16:20:57,556 Sleeping for 10s. Reason: RUNNING
2024-12-07 16:21:07,815 Sleeping for 10s. Reason: RUNNING
2024-12-07 16:21:18,072 Sleeping for 6s. Reason: RUNNING
2024-12-07 16:21:24,330 Sleeping for 8s. Reason: RUNNING
2024-12-07 16:21:32,597 Sleeping for 6s. Reason: RUNNING
2024-12-07 16:21:38,863 Sleeping for 6s. Reason: RUNNING
2024-12-07 16:21:45,118 Sleeping for 6s. Reason: RUNNING
2024-12-07 16:21:52,885 Sleeping for 10s. Reason: PENDING
2024-12-07 16:22:03,147 Sleeping for 7s. Reason: RUNNING
2024-12-07 16:22:10,407 Sleeping for 10s. Reason: RUNNING
2024-12-07 16:22:20,670 Sleeping for 8s. Reason: RUNNING
2024-12-07 16:22:28,936 Sleeping for 10s. Reason: RUNNING
2024-12-07 16:22:39,199 Sleeping for 6s. Reason: RUNNING
2024-12-07 16:22:45,455 Sleeping for 10s. Reason: RUNNING
2024-12-07 16:22:55,731 Sleeping for 6s. Reason: RUNNING
2024-12-07 16:23:04,485 Setting max_seq=508, max_extra_seq=2048
2024-12-07 16:26:03,340 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=51.7 pTM=0.486 ipTM=0.294
2024-12-07 16:26:25,678 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=54.3 pTM=0.544 ipTM=0.624 tol=17.7
2024-12-07 16:26:48,129 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=53.7 pTM=0.512 ipTM=0.327 tol=7.26
2024-12-07 16:27:10,673 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=53 pTM=0.491 ipTM=0.24 tol=3.4
2024-12-07 16:27:33,284 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=53 pTM=0.492 ipTM=0.378 tol=3.21
2024-12-07 16:27:55,957 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=53.3 pTM=0.491 ipTM=0.269 tol=2.87
2024-12-07 16:28:18,666 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=53 pTM=0.492 ipTM=0.266 tol=2.61
2024-12-07 16:28:41,408 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=53 pTM=0.485 ipTM=0.262 tol=1.97
2024-12-07 16:29:04,174 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=53.1 pTM=0.487 ipTM=0.452 tol=7.49
2024-12-07 16:29:26,964 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=53.2 pTM=0.483 ipTM=0.38 tol=2.84
2024-12-07 16:29:49,807 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=53.3 pTM=0.492 ipTM=0.271 tol=2.81
2024-12-07 16:30:12,675 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=53.3 pTM=0.483 ipTM=0.296 tol=4.55
2024-12-07 16:30:35,548 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=53 pTM=0.483 ipTM=0.263 tol=4.74
2024-12-07 16:30:58,418 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=53.2 pTM=0.484 ipTM=0.285 tol=4.08
2024-12-07 16:31:21,254 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=52.5 pTM=0.488 ipTM=0.248 tol=3.02
2024-12-07 16:31:44,100 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=53.1 pTM=0.485 ipTM=0.257 tol=2.64
2024-12-07 16:32:06,952 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=52.9 pTM=0.49 ipTM=0.251 tol=2.95
2024-12-07 16:32:29,794 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=53.1 pTM=0.483 ipTM=0.275 tol=3.06
2024-12-07 16:32:52,628 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=53 pTM=0.487 ipTM=0.268 tol=3.78
2024-12-07 16:33:15,453 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=53 pTM=0.479 ipTM=0.247 tol=2.52
2024-12-07 16:33:38,248 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=52.5 pTM=0.487 ipTM=0.246 tol=2.45
2024-12-07 16:34:01,061 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=52.7 pTM=0.483 ipTM=0.303 tol=2.29
2024-12-07 16:34:23,875 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=52.8 pTM=0.489 ipTM=0.257 tol=2.8
2024-12-07 16:34:46,684 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=53.1 pTM=0.485 ipTM=0.268 tol=2.36
2024-12-07 16:35:09,496 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=52.9 pTM=0.492 ipTM=0.285 tol=3.41
2024-12-07 16:35:32,317 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=53.2 pTM=0.486 ipTM=0.277 tol=2.53
2024-12-07 16:35:55,115 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=53 pTM=0.498 ipTM=0.292 tol=2.95
2024-12-07 16:36:17,917 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=53.1 pTM=0.486 ipTM=0.281 tol=2.65
2024-12-07 16:36:40,705 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=52.7 pTM=0.489 ipTM=0.258 tol=2.33
2024-12-07 16:37:03,522 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=53 pTM=0.485 ipTM=0.248 tol=2.21
2024-12-07 16:37:26,345 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=53.1 pTM=0.501 ipTM=0.302 tol=2.64
2024-12-07 16:37:26,346 alphafold2_multimer_v3_model_1_seed_000 took 857.0s (30 recycles)
2024-12-07 16:37:49,846 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=54.1 pTM=0.541 ipTM=0.672
2024-12-07 16:38:12,758 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=53.6 pTM=0.501 ipTM=0.365 tol=13.9
2024-12-07 16:38:35,711 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=53.5 pTM=0.475 ipTM=0.217 tol=7.31
2024-12-07 16:38:58,668 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=53 pTM=0.476 ipTM=0.235 tol=5.35
2024-12-07 16:39:21,637 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=53.2 pTM=0.469 ipTM=0.203 tol=7.3
2024-12-07 16:39:44,593 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=53.6 pTM=0.481 ipTM=0.279 tol=4.61
2024-12-07 16:40:07,566 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=53.7 pTM=0.472 ipTM=0.212 tol=3.23
2024-12-07 16:40:30,538 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=53.8 pTM=0.492 ipTM=0.355 tol=3
2024-12-07 16:40:53,549 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=53.9 pTM=0.474 ipTM=0.238 tol=2.94
2024-12-07 16:41:16,520 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=53.6 pTM=0.484 ipTM=0.296 tol=2.34
2024-12-07 16:41:39,511 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=53.8 pTM=0.471 ipTM=0.217 tol=2.65
2024-12-07 16:42:02,470 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=53.8 pTM=0.486 ipTM=0.306 tol=2.46
2024-12-07 16:42:25,440 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=54.2 pTM=0.475 ipTM=0.235 tol=3.27
2024-12-07 16:42:48,416 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=54 pTM=0.485 ipTM=0.292 tol=3.83
2024-12-07 16:43:11,390 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=53.9 pTM=0.473 ipTM=0.213 tol=3.58
2024-12-07 16:43:34,388 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=54.1 pTM=0.493 ipTM=0.353 tol=3.1
2024-12-07 16:43:57,397 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=54.1 pTM=0.475 ipTM=0.237 tol=4.67
2024-12-07 16:44:20,354 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=54.1 pTM=0.489 ipTM=0.32 tol=3.73
2024-12-07 16:44:43,295 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=54.1 pTM=0.474 ipTM=0.223 tol=4.74
2024-12-07 16:45:06,216 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=53.9 pTM=0.486 ipTM=0.307 tol=3.96
2024-12-07 16:45:29,135 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=53.9 pTM=0.475 ipTM=0.237 tol=3.57
2024-12-07 16:45:52,033 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=53.6 pTM=0.484 ipTM=0.289 tol=3.26
2024-12-07 16:46:14,971 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=53.7 pTM=0.472 ipTM=0.219 tol=3.53
2024-12-07 16:46:37,892 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=53.4 pTM=0.474 ipTM=0.245 tol=2.36
2024-12-07 16:47:00,824 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=53.7 pTM=0.473 ipTM=0.234 tol=2.36
2024-12-07 16:47:23,752 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=54.2 pTM=0.496 ipTM=0.357 tol=3.19
2024-12-07 16:47:46,682 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=54.1 pTM=0.475 ipTM=0.229 tol=2.34
2024-12-07 16:48:09,601 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=53.8 pTM=0.491 ipTM=0.33 tol=3.69
2024-12-07 16:48:32,543 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=53.8 pTM=0.476 ipTM=0.221 tol=2.35
2024-12-07 16:48:55,493 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=53.9 pTM=0.493 ipTM=0.333 tol=3.68
2024-12-07 16:49:18,429 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=53.8 pTM=0.477 ipTM=0.227 tol=3.79
2024-12-07 16:49:18,430 alphafold2_multimer_v3_model_2_seed_000 took 711.4s (30 recycles)
2024-12-07 16:49:42,061 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=53 pTM=0.487 ipTM=0.39
2024-12-07 16:50:05,080 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=53.9 pTM=0.484 ipTM=0.314 tol=15.7
2024-12-07 16:50:28,083 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=53.7 pTM=0.479 ipTM=0.275 tol=8.51
2024-12-07 16:50:51,072 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=53.8 pTM=0.479 ipTM=0.24 tol=6.74
2024-12-07 16:51:14,043 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=53.8 pTM=0.478 ipTM=0.233 tol=3.71
2024-12-07 16:51:36,988 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=54.1 pTM=0.484 ipTM=0.274 tol=4.23
2024-12-07 16:51:59,934 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=53.8 pTM=0.478 ipTM=0.244 tol=5.69
2024-12-07 16:52:22,867 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=54.2 pTM=0.498 ipTM=0.386 tol=5.12
2024-12-07 16:52:45,789 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=53.8 pTM=0.484 ipTM=0.285 tol=3.58
2024-12-07 16:53:08,724 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=53.7 pTM=0.494 ipTM=0.342 tol=3.02
2024-12-07 16:53:31,699 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=53.8 pTM=0.477 ipTM=0.247 tol=3.55
2024-12-07 16:53:54,634 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=54.1 pTM=0.506 ipTM=0.406 tol=3.02
2024-12-07 16:54:17,597 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=53.8 pTM=0.475 ipTM=0.257 tol=6.32
2024-12-07 16:54:40,557 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=54.4 pTM=0.508 ipTM=0.429 tol=5.46
2024-12-07 16:55:03,495 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=54.2 pTM=0.486 ipTM=0.257 tol=4.73
2024-12-07 16:55:26,455 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=54.3 pTM=0.508 ipTM=0.439 tol=4.04
2024-12-07 16:55:49,397 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=54.8 pTM=0.511 ipTM=0.454 tol=2.65
2024-12-07 16:56:12,349 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=54.2 pTM=0.5 ipTM=0.379 tol=2.32
2024-12-07 16:56:35,332 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=53.9 pTM=0.485 ipTM=0.261 tol=6.66
2024-12-07 16:56:58,306 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=54.1 pTM=0.5 ipTM=0.37 tol=6.04
2024-12-07 16:57:21,276 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=54.2 pTM=0.484 ipTM=0.314 tol=4.4
2024-12-07 16:57:44,262 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=54 pTM=0.5 ipTM=0.343 tol=5.29
2024-12-07 16:58:07,262 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=54.2 pTM=0.482 ipTM=0.28 tol=3.13
2024-12-07 16:58:30,272 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=54.6 pTM=0.512 ipTM=0.449 tol=4.77
2024-12-07 16:58:53,274 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=54.2 pTM=0.489 ipTM=0.291 tol=7.23
2024-12-07 16:59:16,257 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=53.8 pTM=0.49 ipTM=0.283 tol=7.19
2024-12-07 16:59:39,210 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=53.9 pTM=0.49 ipTM=0.319 tol=3.89
2024-12-07 17:00:02,154 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=54.4 pTM=0.511 ipTM=0.44 tol=2.64
2024-12-07 17:00:25,124 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=53.9 pTM=0.478 ipTM=0.252 tol=5.25
2024-12-07 17:00:48,069 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=54.2 pTM=0.507 ipTM=0.361 tol=4.25
2024-12-07 17:01:10,994 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=54.2 pTM=0.487 ipTM=0.309 tol=2.25
2024-12-07 17:01:10,995 alphafold2_multimer_v3_model_3_seed_000 took 711.9s (30 recycles)
2024-12-07 17:01:34,487 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=51.9 pTM=0.503 ipTM=0.323
2024-12-07 17:01:57,348 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=55 pTM=0.557 ipTM=0.724 tol=19.6
2024-12-07 17:02:20,232 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=53.9 pTM=0.509 ipTM=0.391 tol=11.5
2024-12-07 17:02:43,138 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=54.4 pTM=0.54 ipTM=0.577 tol=7.47
2024-12-07 17:03:06,064 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=55.5 pTM=0.542 ipTM=0.644 tol=7.11
2024-12-07 17:03:29,011 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=55.7 pTM=0.547 ipTM=0.652 tol=5.27
2024-12-07 17:03:51,987 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=56 pTM=0.551 ipTM=0.693 tol=3.13
2024-12-07 17:04:14,934 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=55.5 pTM=0.545 ipTM=0.658 tol=2.13
2024-12-07 17:04:37,879 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=55.4 pTM=0.55 ipTM=0.656 tol=2.72
2024-12-07 17:05:00,830 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=55.3 pTM=0.544 ipTM=0.641 tol=3.94
2024-12-07 17:05:23,776 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=55.4 pTM=0.547 ipTM=0.668 tol=2.23
2024-12-07 17:05:46,730 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=55.4 pTM=0.545 ipTM=0.647 tol=3.33
2024-12-07 17:06:09,670 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=55.6 pTM=0.549 ipTM=0.694 tol=1.48
2024-12-07 17:06:32,600 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=55.7 pTM=0.547 ipTM=0.653 tol=1.8
2024-12-07 17:06:55,537 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=55.2 pTM=0.539 ipTM=0.622 tol=4.23
2024-12-07 17:07:18,473 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=55.6 pTM=0.547 ipTM=0.656 tol=2.9
2024-12-07 17:07:41,411 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=55.8 pTM=0.551 ipTM=0.704 tol=5.14
2024-12-07 17:08:04,362 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=55.8 pTM=0.547 ipTM=0.659 tol=5.55
2024-12-07 17:08:27,299 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=54.6 pTM=0.524 ipTM=0.528 tol=3.41
2024-12-07 17:08:50,237 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=55.1 pTM=0.537 ipTM=0.602 tol=1.9
2024-12-07 17:09:13,159 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=55.6 pTM=0.548 ipTM=0.697 tol=2.42
2024-12-07 17:09:36,057 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=55.2 pTM=0.541 ipTM=0.626 tol=5.61
2024-12-07 17:09:58,979 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=54.1 pTM=0.513 ipTM=0.478 tol=7.7
2024-12-07 17:10:21,872 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=55.1 pTM=0.537 ipTM=0.6 tol=6.1
2024-12-07 17:10:44,781 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=55.4 pTM=0.536 ipTM=0.612 tol=3.61
2024-12-07 17:11:07,710 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=55.2 pTM=0.533 ipTM=0.594 tol=3
2024-12-07 17:11:30,659 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=55.1 pTM=0.537 ipTM=0.638 tol=2.84
2024-12-07 17:11:53,605 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=54.9 pTM=0.533 ipTM=0.587 tol=4.06
2024-12-07 17:12:16,552 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=55 pTM=0.545 ipTM=0.665 tol=2.47
2024-12-07 17:12:39,503 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=55.2 pTM=0.536 ipTM=0.615 tol=2.86
2024-12-07 17:13:02,457 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=55.5 pTM=0.545 ipTM=0.672 tol=2.67
2024-12-07 17:13:02,458 alphafold2_multimer_v3_model_4_seed_000 took 710.8s (30 recycles)
2024-12-07 17:13:26,078 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=52.7 pTM=0.49 ipTM=0.311
2024-12-07 17:13:49,058 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=54.2 pTM=0.525 ipTM=0.408 tol=18.2
2024-12-07 17:14:12,067 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=54.8 pTM=0.498 ipTM=0.429 tol=8.41
2024-12-07 17:14:35,058 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=54.6 pTM=0.515 ipTM=0.383 tol=7.88
2024-12-07 17:14:58,063 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=54.3 pTM=0.493 ipTM=0.303 tol=6.24
2024-12-07 17:15:21,070 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=54.1 pTM=0.491 ipTM=0.3 tol=4.67
2024-12-07 17:15:44,052 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=54.1 pTM=0.49 ipTM=0.306 tol=8.05
2024-12-07 17:16:07,031 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=54.5 pTM=0.511 ipTM=0.45 tol=8.45
2024-12-07 17:16:29,978 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=55 pTM=0.514 ipTM=0.496 tol=6.26
2024-12-07 17:16:52,910 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=54.7 pTM=0.515 ipTM=0.493 tol=4.69
2024-12-07 17:17:15,861 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=54.5 pTM=0.495 ipTM=0.353 tol=9.89
2024-12-07 17:17:38,810 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=54 pTM=0.485 ipTM=0.271 tol=8.57
2024-12-07 17:18:01,732 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=54.5 pTM=0.503 ipTM=0.411 tol=5.17
2024-12-07 17:18:24,663 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=55.3 pTM=0.511 ipTM=0.472 tol=3.01
2024-12-07 17:18:47,582 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=54.5 pTM=0.497 ipTM=0.399 tol=3.15
2024-12-07 17:19:10,526 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=54.9 pTM=0.513 ipTM=0.484 tol=4.16
2024-12-07 17:19:33,456 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=55.2 pTM=0.514 ipTM=0.493 tol=4.05
2024-12-07 17:19:56,409 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=54.6 pTM=0.496 ipTM=0.375 tol=3.74
2024-12-07 17:20:19,346 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=54.2 pTM=0.499 ipTM=0.375 tol=3.93
2024-12-07 17:20:42,290 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=54.3 pTM=0.483 ipTM=0.281 tol=4.16
2024-12-07 17:21:05,220 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=54.1 pTM=0.495 ipTM=0.328 tol=3.44
2024-12-07 17:21:28,167 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=54.1 pTM=0.478 ipTM=0.219 tol=5.01
2024-12-07 17:21:51,119 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=53.8 pTM=0.489 ipTM=0.294 tol=5.69
2024-12-07 17:22:14,080 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=54.3 pTM=0.476 ipTM=0.213 tol=3.66
2024-12-07 17:22:37,027 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=54 pTM=0.485 ipTM=0.268 tol=3.25
2024-12-07 17:23:00,005 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=54.1 pTM=0.476 ipTM=0.266 tol=7.18
2024-12-07 17:23:22,968 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=53.8 pTM=0.484 ipTM=0.254 tol=5.68
2024-12-07 17:23:45,917 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=54 pTM=0.482 ipTM=0.251 tol=3.61
2024-12-07 17:24:08,872 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=53.7 pTM=0.478 ipTM=0.241 tol=4.41
2024-12-07 17:24:31,848 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=53.9 pTM=0.477 ipTM=0.231 tol=3.99
2024-12-07 17:24:54,859 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=53.7 pTM=0.479 ipTM=0.247 tol=3.07
2024-12-07 17:24:54,860 alphafold2_multimer_v3_model_5_seed_000 took 711.8s (30 recycles)
2024-12-07 17:24:55,497 reranking models by 'multimer' metric
2024-12-07 17:24:57,604 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-07 17:26:54,534 Relaxation took 119.0s
2024-12-07 17:26:54,534 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=55.5 pTM=0.545 ipTM=0.672
2024-12-07 17:28:51,936 Relaxation took 117.4s
2024-12-07 17:28:51,936 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=54.2 pTM=0.487 ipTM=0.309
2024-12-07 17:30:47,392 Relaxation took 115.5s
2024-12-07 17:30:47,392 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=53.1 pTM=0.501 ipTM=0.302
2024-12-07 17:32:08,117 Relaxation took 80.7s
2024-12-07 17:32:08,117 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=53.7 pTM=0.479 ipTM=0.247
2024-12-07 17:33:56,087 Relaxation took 108.0s
2024-12-07 17:33:56,087 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=53.8 pTM=0.477 ipTM=0.227
2024-12-07 17:33:58,042 Done