2024-12-07 16:57:28,460 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-07 16:57:28,790 Running on GPU
2024-12-07 16:57:32,312 Found 6 citations for tools or databases
2024-12-07 16:57:32,312 Query 1/1: RBBP5_KDM6A (length 1939)
2024-12-07 16:57:32,605 Sleeping for 5s. Reason: PENDING
2024-12-07 16:57:37,860 Sleeping for 8s. Reason: RUNNING
2024-12-07 16:57:46,115 Sleeping for 6s. Reason: RUNNING
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2024-12-07 16:58:32,920 Sleeping for 9s. Reason: RUNNING
2024-12-07 16:58:42,185 Sleeping for 10s. Reason: RUNNING
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2024-12-07 16:59:02,706 Sleeping for 9s. Reason: RUNNING
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2024-12-07 16:59:17,231 Sleeping for 9s. Reason: RUNNING
2024-12-07 16:59:26,494 Sleeping for 7s. Reason: RUNNING
2024-12-07 16:59:33,747 Sleeping for 9s. Reason: RUNNING
2024-12-07 16:59:43,004 Sleeping for 9s. Reason: RUNNING
2024-12-07 16:59:52,261 Sleeping for 5s. Reason: RUNNING
2024-12-07 16:59:57,517 Sleeping for 10s. Reason: RUNNING
2024-12-07 17:00:07,787 Sleeping for 9s. Reason: RUNNING
2024-12-07 17:00:17,045 Sleeping for 8s. Reason: RUNNING
2024-12-07 17:00:25,310 Sleeping for 6s. Reason: RUNNING
2024-12-07 17:00:31,564 Sleeping for 8s. Reason: RUNNING
2024-12-07 17:00:39,821 Sleeping for 8s. Reason: RUNNING
2024-12-07 17:00:48,077 Sleeping for 9s. Reason: RUNNING
2024-12-07 17:00:57,335 Sleeping for 9s. Reason: RUNNING
2024-12-07 17:01:06,607 Sleeping for 9s. Reason: RUNNING
2024-12-07 17:01:17,383 Sleeping for 7s. Reason: PENDING
2024-12-07 17:01:24,641 Sleeping for 8s. Reason: RUNNING
2024-12-07 17:01:32,888 Sleeping for 10s. Reason: RUNNING
2024-12-07 17:01:43,144 Sleeping for 7s. Reason: RUNNING
2024-12-07 17:01:50,410 Sleeping for 10s. Reason: RUNNING
2024-12-07 17:02:00,669 Sleeping for 5s. Reason: RUNNING
2024-12-07 17:02:05,918 Sleeping for 5s. Reason: RUNNING
2024-12-07 17:02:11,171 Sleeping for 6s. Reason: RUNNING
2024-12-07 17:02:17,427 Sleeping for 8s. Reason: RUNNING
2024-12-07 17:02:25,685 Sleeping for 9s. Reason: RUNNING
2024-12-07 17:02:34,949 Sleeping for 7s. Reason: RUNNING
2024-12-07 17:02:42,208 Sleeping for 10s. Reason: RUNNING
2024-12-07 17:02:52,465 Sleeping for 8s. Reason: RUNNING
2024-12-07 17:03:00,721 Sleeping for 9s. Reason: RUNNING
2024-12-07 17:03:09,983 Sleeping for 8s. Reason: RUNNING
2024-12-07 17:03:18,238 Sleeping for 8s. Reason: RUNNING
2024-12-07 17:03:26,497 Sleeping for 9s. Reason: RUNNING
2024-12-07 17:03:35,757 Sleeping for 8s. Reason: RUNNING
2024-12-07 17:03:44,017 Sleeping for 5s. Reason: RUNNING
2024-12-07 17:03:49,275 Sleeping for 8s. Reason: RUNNING
2024-12-07 17:03:57,534 Sleeping for 5s. Reason: RUNNING
2024-12-07 17:04:06,496 Setting max_seq=508, max_extra_seq=2048
2024-12-07 17:09:25,061 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=61.4 pTM=0.515 ipTM=0.237
2024-12-07 17:11:52,440 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=61.9 pTM=0.515 ipTM=0.213 tol=13.1
2024-12-07 17:14:19,822 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=61.9 pTM=0.515 ipTM=0.225 tol=8.35
2024-12-07 17:16:47,115 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=61.8 pTM=0.513 ipTM=0.233 tol=4.65
2024-12-07 17:19:14,439 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=61.6 pTM=0.51 ipTM=0.211 tol=7.2
2024-12-07 17:21:41,756 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=61.5 pTM=0.506 ipTM=0.215 tol=5.04
2024-12-07 17:24:09,065 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=61.4 pTM=0.503 ipTM=0.213 tol=8.95
2024-12-07 17:26:36,520 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=61.5 pTM=0.501 ipTM=0.213 tol=9.93
2024-12-07 17:29:03,890 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=61.5 pTM=0.5 ipTM=0.215 tol=7.53
2024-12-07 17:31:31,276 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=61.4 pTM=0.502 ipTM=0.217 tol=5.29
2024-12-07 17:33:58,647 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=61.6 pTM=0.502 ipTM=0.213 tol=3.26
2024-12-07 17:36:25,924 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=61.6 pTM=0.5 ipTM=0.206 tol=4.07
2024-12-07 17:38:53,201 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=61.3 pTM=0.499 ipTM=0.208 tol=4.78
2024-12-07 17:41:20,489 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=61.5 pTM=0.5 ipTM=0.208 tol=4.04
2024-12-07 17:43:47,810 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=61.4 pTM=0.5 ipTM=0.219 tol=4.74
2024-12-07 17:46:15,280 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=61.5 pTM=0.5 ipTM=0.224 tol=5.81
2024-12-07 17:48:42,649 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=61.6 pTM=0.502 ipTM=0.219 tol=7.71
2024-12-07 17:51:10,018 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=61.4 pTM=0.501 ipTM=0.218 tol=8.9
2024-12-07 17:53:37,347 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=61.6 pTM=0.502 ipTM=0.218 tol=4.05
2024-12-07 17:56:04,806 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=61.3 pTM=0.499 ipTM=0.211 tol=6.7
2024-12-07 17:58:32,161 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=61.5 pTM=0.507 ipTM=0.231 tol=6.61
2024-12-07 18:00:59,436 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=61.7 pTM=0.505 ipTM=0.222 tol=8.48
2024-12-07 18:03:26,636 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=61.4 pTM=0.504 ipTM=0.222 tol=7.14
2024-12-07 18:05:53,967 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=61.5 pTM=0.499 ipTM=0.216 tol=6.08
2024-12-07 18:08:21,351 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=61.5 pTM=0.499 ipTM=0.21 tol=4.17
2024-12-07 18:10:48,761 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=61.6 pTM=0.502 ipTM=0.213 tol=5.34
2024-12-07 18:13:16,070 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=61.3 pTM=0.502 ipTM=0.221 tol=7.76
2024-12-07 18:15:43,327 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=61.6 pTM=0.503 ipTM=0.217 tol=4.96
2024-12-07 18:18:10,614 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=61.5 pTM=0.505 ipTM=0.222 tol=6.53
2024-12-07 18:20:37,925 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=61.6 pTM=0.505 ipTM=0.225 tol=6.25
2024-12-07 18:23:05,192 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=61.5 pTM=0.507 ipTM=0.23 tol=5.33
2024-12-07 18:23:05,194 alphafold2_multimer_v3_model_1_seed_000 took 4733.4s (30 recycles)
2024-12-07 18:25:34,772 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=61 pTM=0.514 ipTM=0.213
2024-12-07 18:28:02,171 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=62 pTM=0.506 ipTM=0.205 tol=10.2
2024-12-07 18:30:29,606 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=62.4 pTM=0.508 ipTM=0.229 tol=6.09
2024-12-07 18:32:57,109 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=62.3 pTM=0.51 ipTM=0.264 tol=10.3
2024-12-07 18:35:24,636 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=62.7 pTM=0.513 ipTM=0.246 tol=8.45
2024-12-07 18:37:52,150 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=62.7 pTM=0.513 ipTM=0.234 tol=5.06
2024-12-07 18:40:19,641 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=62.8 pTM=0.513 ipTM=0.243 tol=8.18
2024-12-07 18:42:47,135 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=62.7 pTM=0.512 ipTM=0.262 tol=5.98
2024-12-07 18:45:14,599 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=62.4 pTM=0.512 ipTM=0.256 tol=6.78
2024-12-07 18:47:42,042 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=62.4 pTM=0.51 ipTM=0.269 tol=4.25
2024-12-07 18:50:09,555 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=62.5 pTM=0.512 ipTM=0.258 tol=6.02
2024-12-07 18:52:37,022 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=62.6 pTM=0.515 ipTM=0.276 tol=11.4
2024-12-07 18:55:04,454 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=62.7 pTM=0.519 ipTM=0.261 tol=7.02
2024-12-07 18:57:31,933 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=62.6 pTM=0.517 ipTM=0.271 tol=2.9
2024-12-07 18:59:59,436 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=62.8 pTM=0.517 ipTM=0.256 tol=4.61
2024-12-07 19:02:26,994 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=62.7 pTM=0.514 ipTM=0.261 tol=4.47
2024-12-07 19:04:54,518 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=62.8 pTM=0.515 ipTM=0.247 tol=7.44
2024-12-07 19:07:22,039 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=62.7 pTM=0.516 ipTM=0.269 tol=8.93
2024-12-07 19:09:49,519 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=62.8 pTM=0.519 ipTM=0.256 tol=5.16
2024-12-07 19:12:16,941 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=62.7 pTM=0.521 ipTM=0.26 tol=3.53
2024-12-07 19:14:44,426 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=62.7 pTM=0.517 ipTM=0.248 tol=8.16
2024-12-07 19:17:11,939 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=62.7 pTM=0.515 ipTM=0.262 tol=9.09
2024-12-07 19:19:39,433 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=62.7 pTM=0.512 ipTM=0.262 tol=4.81
2024-12-07 19:22:06,885 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=62.7 pTM=0.515 ipTM=0.27 tol=9.84
2024-12-07 19:24:34,321 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=62.7 pTM=0.521 ipTM=0.266 tol=7.53
2024-12-07 19:27:01,848 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=62.6 pTM=0.517 ipTM=0.268 tol=3.24
2024-12-07 19:29:29,380 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=62.8 pTM=0.515 ipTM=0.258 tol=5.11
2024-12-07 19:31:56,910 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=62.6 pTM=0.514 ipTM=0.263 tol=3.5
2024-12-07 19:34:24,391 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=62.7 pTM=0.515 ipTM=0.262 tol=7.04
2024-12-07 19:36:51,987 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=62.7 pTM=0.512 ipTM=0.264 tol=5
2024-12-07 19:39:19,579 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=62.6 pTM=0.514 ipTM=0.259 tol=5.53
2024-12-07 19:39:19,581 alphafold2_multimer_v3_model_2_seed_000 took 4572.2s (30 recycles)
2024-12-07 19:41:49,518 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=60.2 pTM=0.497 ipTM=0.19
2024-12-07 19:44:17,083 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=60.9 pTM=0.498 ipTM=0.22 tol=18.3
2024-12-07 19:46:44,588 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=61.3 pTM=0.512 ipTM=0.221 tol=25
2024-12-07 19:49:12,029 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=61 pTM=0.512 ipTM=0.222 tol=6.94
2024-12-07 19:51:39,563 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=60.8 pTM=0.511 ipTM=0.208 tol=10.5
2024-12-07 19:54:07,180 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=60.7 pTM=0.508 ipTM=0.22 tol=7.7
2024-12-07 19:56:34,710 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=60.9 pTM=0.511 ipTM=0.224 tol=6.98
2024-12-07 19:59:02,296 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=60.8 pTM=0.513 ipTM=0.245 tol=7.76
2024-12-07 20:01:29,918 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=60.8 pTM=0.509 ipTM=0.243 tol=5.89
2024-12-07 20:03:57,425 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=60.9 pTM=0.511 ipTM=0.228 tol=6.75
2024-12-07 20:06:24,974 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=60.8 pTM=0.511 ipTM=0.234 tol=7.25
2024-12-07 20:08:52,509 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=60.9 pTM=0.51 ipTM=0.232 tol=5.11
2024-12-07 20:11:20,024 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=60.8 pTM=0.514 ipTM=0.239 tol=4.7
2024-12-07 20:13:47,630 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=60.7 pTM=0.513 ipTM=0.241 tol=3.9
2024-12-07 20:16:15,177 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=60.7 pTM=0.511 ipTM=0.223 tol=3.94
2024-12-07 20:18:42,741 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=60.8 pTM=0.515 ipTM=0.235 tol=8.45
2024-12-07 20:21:10,284 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=60.8 pTM=0.517 ipTM=0.224 tol=7.86
2024-12-07 20:23:37,892 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=60.7 pTM=0.512 ipTM=0.224 tol=7.07
2024-12-07 20:26:05,545 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=60.8 pTM=0.51 ipTM=0.216 tol=5.48
2024-12-07 20:28:33,340 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=60.9 pTM=0.506 ipTM=0.238 tol=14.1
2024-12-07 20:31:01,067 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=60.7 pTM=0.511 ipTM=0.232 tol=10.8
2024-12-07 20:33:28,758 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=60.8 pTM=0.508 ipTM=0.237 tol=8
2024-12-07 20:35:56,442 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=60.8 pTM=0.502 ipTM=0.229 tol=17
2024-12-07 20:38:24,154 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=60.8 pTM=0.506 ipTM=0.231 tol=11.4
2024-12-07 20:40:51,854 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=60.8 pTM=0.508 ipTM=0.235 tol=10.6
2024-12-07 20:43:19,460 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=60.7 pTM=0.509 ipTM=0.216 tol=6.76
2024-12-07 20:45:47,118 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=60.9 pTM=0.51 ipTM=0.218 tol=5.98
2024-12-07 20:48:14,707 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=61.1 pTM=0.513 ipTM=0.21 tol=4.82
2024-12-07 20:50:42,329 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=61.2 pTM=0.512 ipTM=0.238 tol=4.77
2024-12-07 20:53:09,950 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=61.3 pTM=0.515 ipTM=0.243 tol=4.44
2024-12-07 20:55:37,540 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=61.1 pTM=0.51 ipTM=0.229 tol=3.48
2024-12-07 20:55:37,542 alphafold2_multimer_v3_model_3_seed_000 took 4575.8s (30 recycles)
2024-12-07 20:58:07,138 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=59.8 pTM=0.5 ipTM=0.208
2024-12-07 21:00:34,652 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=60 pTM=0.509 ipTM=0.201 tol=20.1
2024-12-07 21:03:02,224 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=60.1 pTM=0.51 ipTM=0.206 tol=11.8
2024-12-07 21:05:29,762 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=60.3 pTM=0.518 ipTM=0.222 tol=6.79
2024-12-07 21:07:57,353 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=60.6 pTM=0.513 ipTM=0.206 tol=6.24
2024-12-07 21:10:24,938 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=60.4 pTM=0.517 ipTM=0.214 tol=6.45
2024-12-07 21:12:52,526 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=60.2 pTM=0.512 ipTM=0.206 tol=7.66
2024-12-07 21:15:20,075 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=60.3 pTM=0.516 ipTM=0.219 tol=7.67
2024-12-07 21:17:47,662 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=60.3 pTM=0.511 ipTM=0.203 tol=3.42
2024-12-07 21:20:15,266 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=60 pTM=0.513 ipTM=0.209 tol=4.32
2024-12-07 21:22:42,851 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=60.1 pTM=0.513 ipTM=0.205 tol=4.08
2024-12-07 21:25:10,436 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=60.4 pTM=0.513 ipTM=0.205 tol=3.87
2024-12-07 21:27:38,093 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=60.4 pTM=0.511 ipTM=0.202 tol=3.44
2024-12-07 21:30:05,801 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=59.9 pTM=0.509 ipTM=0.2 tol=4.5
2024-12-07 21:32:33,397 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=60 pTM=0.51 ipTM=0.196 tol=4.53
2024-12-07 21:35:00,921 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=59.9 pTM=0.511 ipTM=0.204 tol=5.3
2024-12-07 21:37:28,399 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=60.2 pTM=0.512 ipTM=0.199 tol=4.33
2024-12-07 21:39:55,979 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=60.2 pTM=0.513 ipTM=0.202 tol=4.63
2024-12-07 21:42:23,553 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=60.3 pTM=0.514 ipTM=0.205 tol=5.39
2024-12-07 21:44:51,154 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=60.2 pTM=0.511 ipTM=0.2 tol=4.91
2024-12-07 21:47:18,716 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=60.2 pTM=0.515 ipTM=0.204 tol=4
2024-12-07 21:49:46,246 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=60.2 pTM=0.515 ipTM=0.21 tol=4.32
2024-12-07 21:52:13,889 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=60.5 pTM=0.513 ipTM=0.198 tol=4.88
2024-12-07 21:54:41,514 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=60.1 pTM=0.51 ipTM=0.202 tol=3.95
2024-12-07 21:57:09,121 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=60.2 pTM=0.509 ipTM=0.199 tol=4.66
2024-12-07 21:59:36,718 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=60 pTM=0.51 ipTM=0.2 tol=5.25
2024-12-07 22:02:04,292 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=60.2 pTM=0.513 ipTM=0.206 tol=3.54
2024-12-07 22:04:31,784 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=60.1 pTM=0.513 ipTM=0.203 tol=2.78
2024-12-07 22:06:59,266 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=60.2 pTM=0.514 ipTM=0.209 tol=2.95
2024-12-07 22:09:26,845 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=60.3 pTM=0.511 ipTM=0.199 tol=8.81
2024-12-07 22:11:54,431 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=60.2 pTM=0.512 ipTM=0.201 tol=9.16
2024-12-07 22:11:54,433 alphafold2_multimer_v3_model_4_seed_000 took 4574.7s (30 recycles)
2024-12-07 22:14:24,115 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=59.8 pTM=0.513 ipTM=0.306
2024-12-07 22:16:51,729 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=60.8 pTM=0.497 ipTM=0.206 tol=15.9
2024-12-07 22:19:19,204 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=61.2 pTM=0.52 ipTM=0.273 tol=26.9
2024-12-07 22:21:46,728 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=61.2 pTM=0.51 ipTM=0.241 tol=7.23
2024-12-07 22:24:14,320 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=61.4 pTM=0.511 ipTM=0.234 tol=5.3
2024-12-07 22:26:41,877 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=61.4 pTM=0.509 ipTM=0.223 tol=6.61
2024-12-07 22:29:09,495 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=61.5 pTM=0.509 ipTM=0.228 tol=7.32
2024-12-07 22:31:37,020 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=61.6 pTM=0.514 ipTM=0.237 tol=5.33
2024-12-07 22:34:04,618 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=61.4 pTM=0.51 ipTM=0.23 tol=8.66
2024-12-07 22:36:32,242 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=61.4 pTM=0.503 ipTM=0.221 tol=9.63
2024-12-07 22:38:59,821 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=61.6 pTM=0.509 ipTM=0.222 tol=6.97
2024-12-07 22:41:27,401 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=61.6 pTM=0.507 ipTM=0.213 tol=6.49
2024-12-07 22:43:54,941 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=61.8 pTM=0.516 ipTM=0.223 tol=6.21
2024-12-07 22:46:22,197 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=62.5 pTM=0.583 ipTM=0.438 tol=8.38
2024-12-07 22:48:49,518 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=62.5 pTM=0.541 ipTM=0.287 tol=3.78
2024-12-07 22:51:16,899 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=61.7 pTM=0.523 ipTM=0.232 tol=3.93
2024-12-07 22:53:44,255 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=62.2 pTM=0.541 ipTM=0.292 tol=4.41
2024-12-07 22:56:11,677 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=61.9 pTM=0.523 ipTM=0.247 tol=5.32
2024-12-07 22:58:39,091 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=61.8 pTM=0.519 ipTM=0.23 tol=3.72
2024-12-07 23:01:06,418 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=62.1 pTM=0.552 ipTM=0.332 tol=5.75
2024-12-07 23:03:33,782 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=62.1 pTM=0.523 ipTM=0.244 tol=6
2024-12-07 23:06:01,242 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=61.8 pTM=0.52 ipTM=0.227 tol=5.45
2024-12-07 23:08:28,554 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=62 pTM=0.524 ipTM=0.236 tol=5.64
2024-12-07 23:10:55,795 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=62.1 pTM=0.533 ipTM=0.255 tol=4.89
2024-12-07 23:13:23,161 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=61.8 pTM=0.519 ipTM=0.232 tol=5.11
2024-12-07 23:15:50,570 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=61.6 pTM=0.517 ipTM=0.235 tol=3.33
2024-12-07 23:18:17,960 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=61.9 pTM=0.52 ipTM=0.231 tol=2.94
2024-12-07 23:20:45,354 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=61.8 pTM=0.524 ipTM=0.27 tol=3.05
2024-12-07 23:23:12,792 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=61.8 pTM=0.523 ipTM=0.223 tol=3.97
2024-12-07 23:25:40,329 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=61.7 pTM=0.515 ipTM=0.225 tol=3.42
2024-12-07 23:28:07,869 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=61.5 pTM=0.514 ipTM=0.25 tol=4.1
2024-12-07 23:28:07,871 alphafold2_multimer_v3_model_5_seed_000 took 4571.3s (30 recycles)
2024-12-07 23:28:10,040 reranking models by 'multimer' metric
2024-12-07 23:28:13,401 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-07 23:32:56,339 Relaxation took 286.3s
2024-12-07 23:32:56,339 rank_001_alphafold2_multimer_v3_model_2_seed_000 pLDDT=62.6 pTM=0.514 ipTM=0.259
2024-12-07 23:37:51,258 Relaxation took 294.9s
2024-12-07 23:37:51,259 rank_002_alphafold2_multimer_v3_model_5_seed_000 pLDDT=61.5 pTM=0.514 ipTM=0.25
2024-12-07 23:42:41,452 Relaxation took 290.2s
2024-12-07 23:42:41,452 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=61.5 pTM=0.507 ipTM=0.23
2024-12-07 23:47:49,710 Relaxation took 308.3s
2024-12-07 23:47:49,711 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=61.1 pTM=0.51 ipTM=0.229
2024-12-07 23:55:25,217 Relaxation took 455.5s
2024-12-07 23:55:25,217 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=60.2 pTM=0.512 ipTM=0.201
2024-12-07 23:55:30,084 Done