2024-12-07 17:10:32,838 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-07 17:10:33,149 Running on GPU
2024-12-07 17:10:36,593 Found 6 citations for tools or databases
2024-12-07 17:10:36,593 Query 1/1: RBBP6_CDX1 (length 2057)
2024-12-07 17:10:36,904 Sleeping for 9s. Reason: PENDING
2024-12-07 17:10:46,167 Sleeping for 9s. Reason: RUNNING
2024-12-07 17:10:55,423 Sleeping for 10s. Reason: RUNNING
2024-12-07 17:11:05,682 Sleeping for 7s. Reason: RUNNING
2024-12-07 17:11:12,940 Sleeping for 10s. Reason: RUNNING
2024-12-07 17:11:23,206 Sleeping for 7s. Reason: RUNNING
2024-12-07 17:11:30,466 Sleeping for 7s. Reason: RUNNING
2024-12-07 17:11:37,732 Sleeping for 5s. Reason: RUNNING
2024-12-07 17:11:43,003 Sleeping for 7s. Reason: RUNNING
2024-12-07 17:11:50,274 Sleeping for 8s. Reason: RUNNING
2024-12-07 17:11:58,539 Sleeping for 5s. Reason: RUNNING
2024-12-07 17:12:03,799 Sleeping for 6s. Reason: RUNNING
2024-12-07 17:12:10,064 Sleeping for 9s. Reason: RUNNING
2024-12-07 17:12:19,324 Sleeping for 10s. Reason: RUNNING
2024-12-07 17:12:29,593 Sleeping for 8s. Reason: RUNNING
2024-12-07 17:12:39,736 Sleeping for 5s. Reason: PENDING
2024-12-07 17:12:44,989 Sleeping for 7s. Reason: RUNNING
2024-12-07 17:12:52,253 Sleeping for 9s. Reason: RUNNING
2024-12-07 17:13:01,522 Sleeping for 9s. Reason: RUNNING
2024-12-07 17:13:10,789 Sleeping for 10s. Reason: RUNNING
2024-12-07 17:13:21,047 Sleeping for 9s. Reason: RUNNING
2024-12-07 17:13:30,307 Sleeping for 9s. Reason: RUNNING
2024-12-07 17:13:39,573 Sleeping for 10s. Reason: RUNNING
2024-12-07 17:13:55,900 Setting max_seq=508, max_extra_seq=2048
2024-12-07 17:19:53,695 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=26.7 pTM=0.237 ipTM=0.218
2024-12-07 17:22:45,247 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=26.8 pTM=0.231 ipTM=0.225 tol=23.7
2024-12-07 17:25:36,731 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=26.7 pTM=0.232 ipTM=0.23 tol=18.8
2024-12-07 17:28:28,236 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=26.8 pTM=0.233 ipTM=0.235 tol=18.2
2024-12-07 17:31:19,749 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=26.9 pTM=0.235 ipTM=0.237 tol=16
2024-12-07 17:34:11,310 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=27.1 pTM=0.234 ipTM=0.24 tol=13.9
2024-12-07 17:37:02,741 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=26.9 pTM=0.235 ipTM=0.269 tol=12.8
2024-12-07 17:39:54,298 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=26.9 pTM=0.236 ipTM=0.282 tol=12.2
2024-12-07 17:42:45,913 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=27 pTM=0.234 ipTM=0.277 tol=19.1
2024-12-07 17:45:37,467 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=26.9 pTM=0.235 ipTM=0.268 tol=18
2024-12-07 17:48:29,117 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=27.1 pTM=0.232 ipTM=0.235 tol=15
2024-12-07 17:51:20,606 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=26.9 pTM=0.231 ipTM=0.24 tol=10.8
2024-12-07 17:54:12,120 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=27.2 pTM=0.231 ipTM=0.244 tol=12.7
2024-12-07 17:57:03,653 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=27 pTM=0.234 ipTM=0.283 tol=15.6
2024-12-07 17:59:55,157 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=27.1 pTM=0.234 ipTM=0.257 tol=16
2024-12-07 18:02:46,750 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=27.4 pTM=0.229 ipTM=0.235 tol=9.84
2024-12-07 18:05:38,415 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=27.2 pTM=0.228 ipTM=0.235 tol=9.18
2024-12-07 18:08:30,007 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=27.2 pTM=0.23 ipTM=0.26 tol=11.4
2024-12-07 18:11:21,576 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=27.1 pTM=0.234 ipTM=0.294 tol=9.96
2024-12-07 18:14:13,232 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=27 pTM=0.233 ipTM=0.299 tol=23.4
2024-12-07 18:17:04,922 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=27.3 pTM=0.235 ipTM=0.314 tol=17.3
2024-12-07 18:19:56,545 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=27.1 pTM=0.233 ipTM=0.273 tol=10.2
2024-12-07 18:22:48,201 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=27 pTM=0.23 ipTM=0.247 tol=11.6
2024-12-07 18:25:39,808 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=27 pTM=0.23 ipTM=0.253 tol=14.2
2024-12-07 18:28:31,261 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=26.9 pTM=0.231 ipTM=0.281 tol=13.3
2024-12-07 18:31:22,811 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=26.9 pTM=0.232 ipTM=0.272 tol=10.1
2024-12-07 18:34:14,479 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=27 pTM=0.23 ipTM=0.267 tol=8.28
2024-12-07 18:37:06,086 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=27 pTM=0.233 ipTM=0.299 tol=18.5
2024-12-07 18:39:57,622 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=27.1 pTM=0.233 ipTM=0.328 tol=12.9
2024-12-07 18:42:49,224 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=27.1 pTM=0.234 ipTM=0.305 tol=14.8
2024-12-07 18:45:40,621 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=27.2 pTM=0.232 ipTM=0.275 tol=11
2024-12-07 18:45:40,624 alphafold2_multimer_v3_model_1_seed_000 took 5499.8s (30 recycles)
2024-12-07 18:48:34,204 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=26.4 pTM=0.226 ipTM=0.214
2024-12-07 18:51:25,848 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=27.3 pTM=0.225 ipTM=0.216 tol=26.2
2024-12-07 18:54:17,355 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=27.7 pTM=0.227 ipTM=0.238 tol=23
2024-12-07 18:57:08,847 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=27.9 pTM=0.227 ipTM=0.249 tol=15.6
2024-12-07 19:00:00,505 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=28 pTM=0.228 ipTM=0.245 tol=11.9
2024-12-07 19:02:52,269 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=28.1 pTM=0.228 ipTM=0.243 tol=9.59
2024-12-07 19:05:44,003 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=28.2 pTM=0.227 ipTM=0.238 tol=9.14
2024-12-07 19:08:35,754 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=28.2 pTM=0.228 ipTM=0.233 tol=12.5
2024-12-07 19:11:27,406 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=28.4 pTM=0.228 ipTM=0.234 tol=11.5
2024-12-07 19:14:19,074 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=28.5 pTM=0.228 ipTM=0.236 tol=9.33
2024-12-07 19:17:10,838 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=28.3 pTM=0.228 ipTM=0.233 tol=9.14
2024-12-07 19:20:02,534 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=28.3 pTM=0.228 ipTM=0.237 tol=14.1
2024-12-07 19:22:54,254 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=28.6 pTM=0.226 ipTM=0.233 tol=12.5
2024-12-07 19:25:45,994 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=28.5 pTM=0.227 ipTM=0.237 tol=10.3
2024-12-07 19:28:37,683 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=28.4 pTM=0.228 ipTM=0.238 tol=10.8
2024-12-07 19:31:29,390 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=28.6 pTM=0.227 ipTM=0.235 tol=10.2
2024-12-07 19:34:21,091 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=28.4 pTM=0.228 ipTM=0.241 tol=9.83
2024-12-07 19:37:12,765 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=28.3 pTM=0.228 ipTM=0.236 tol=8.78
2024-12-07 19:40:04,477 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=28.1 pTM=0.23 ipTM=0.251 tol=17.4
2024-12-07 19:42:56,100 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=28.4 pTM=0.228 ipTM=0.241 tol=13
2024-12-07 19:45:47,765 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=28.5 pTM=0.229 ipTM=0.236 tol=13.7
2024-12-07 19:48:39,409 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=28.4 pTM=0.23 ipTM=0.237 tol=14.3
2024-12-07 19:51:31,149 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=28.2 pTM=0.228 ipTM=0.232 tol=12.5
2024-12-07 19:54:22,775 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=28.2 pTM=0.228 ipTM=0.234 tol=11.2
2024-12-07 19:57:14,431 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=28.1 pTM=0.227 ipTM=0.233 tol=10.4
2024-12-07 20:00:06,113 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=26.7 pTM=0.227 ipTM=0.233 tol=31.6
2024-12-07 20:02:57,703 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=27.3 pTM=0.225 ipTM=0.216 tol=27.2
2024-12-07 20:05:49,245 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=27.6 pTM=0.224 ipTM=0.221 tol=18.5
2024-12-07 20:08:40,765 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=27.6 pTM=0.226 ipTM=0.229 tol=16.7
2024-12-07 20:11:32,322 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=27.8 pTM=0.233 ipTM=0.306 tol=15.1
2024-12-07 20:14:23,919 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=28.1 pTM=0.233 ipTM=0.312 tol=18
2024-12-07 20:14:23,921 alphafold2_multimer_v3_model_2_seed_000 took 5320.9s (30 recycles)
2024-12-07 20:17:18,622 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=27.8 pTM=0.226 ipTM=0.245
2024-12-07 20:20:11,597 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=27.5 pTM=0.218 ipTM=0.218 tol=30.2
2024-12-07 20:23:04,420 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=27.5 pTM=0.218 ipTM=0.228 tol=26.7
2024-12-07 20:25:57,243 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=27.6 pTM=0.215 ipTM=0.219 tol=20.8
2024-12-07 20:28:50,070 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=27.8 pTM=0.219 ipTM=0.23 tol=16.6
2024-12-07 20:31:43,106 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=27.9 pTM=0.219 ipTM=0.228 tol=21.2
2024-12-07 20:34:36,113 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=27.9 pTM=0.219 ipTM=0.238 tol=16.8
2024-12-07 20:37:29,064 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=27.9 pTM=0.224 ipTM=0.304 tol=13.5
2024-12-07 20:40:22,066 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=28.1 pTM=0.22 ipTM=0.235 tol=12.1
2024-12-07 20:43:15,091 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=28.2 pTM=0.219 ipTM=0.225 tol=9.36
2024-12-07 20:46:08,215 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=28.3 pTM=0.224 ipTM=0.286 tol=8.57
2024-12-07 20:49:01,125 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=28.1 pTM=0.22 ipTM=0.228 tol=10.3
2024-12-07 20:51:54,087 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=28.3 pTM=0.219 ipTM=0.226 tol=9.91
2024-12-07 20:54:47,077 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=28.3 pTM=0.22 ipTM=0.234 tol=7.84
2024-12-07 20:57:40,171 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=28.2 pTM=0.219 ipTM=0.231 tol=23.4
2024-12-07 21:00:33,131 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=28 pTM=0.217 ipTM=0.227 tol=22.6
2024-12-07 21:03:26,122 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=27.6 pTM=0.219 ipTM=0.246 tol=16.2
2024-12-07 21:06:19,136 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=27.9 pTM=0.219 ipTM=0.235 tol=13.3
2024-12-07 21:09:12,053 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=28 pTM=0.221 ipTM=0.229 tol=14.6
2024-12-07 21:12:05,120 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=28 pTM=0.222 ipTM=0.259 tol=13.1
2024-12-07 21:14:58,179 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=28.1 pTM=0.221 ipTM=0.234 tol=11.8
2024-12-07 21:17:51,157 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=28.1 pTM=0.221 ipTM=0.235 tol=12.1
2024-12-07 21:20:44,114 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=28 pTM=0.221 ipTM=0.231 tol=11.6
2024-12-07 21:23:37,092 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=28 pTM=0.222 ipTM=0.236 tol=11.5
2024-12-07 21:26:30,022 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=27.9 pTM=0.222 ipTM=0.263 tol=10.9
2024-12-07 21:29:22,919 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=27.9 pTM=0.221 ipTM=0.25 tol=13.3
2024-12-07 21:32:15,948 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=28 pTM=0.22 ipTM=0.239 tol=12.9
2024-12-07 21:35:09,029 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=28.2 pTM=0.224 ipTM=0.273 tol=12.4
2024-12-07 21:38:02,031 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=28.2 pTM=0.222 ipTM=0.269 tol=10.5
2024-12-07 21:40:54,854 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=28.1 pTM=0.223 ipTM=0.26 tol=9.96
2024-12-07 21:43:47,658 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=28.2 pTM=0.221 ipTM=0.239 tol=9.89
2024-12-07 21:43:47,660 alphafold2_multimer_v3_model_3_seed_000 took 5361.3s (30 recycles)
2024-12-07 21:46:42,245 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=26 pTM=0.231 ipTM=0.335
2024-12-07 21:49:35,600 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=26.4 pTM=0.228 ipTM=0.306 tol=27
2024-12-07 21:52:28,994 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=26.3 pTM=0.226 ipTM=0.274 tol=27.6
2024-12-07 21:55:22,371 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=26.5 pTM=0.232 ipTM=0.301 tol=16.6
2024-12-07 21:58:15,730 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=26.7 pTM=0.235 ipTM=0.306 tol=21.3
2024-12-07 22:01:08,940 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=26.8 pTM=0.239 ipTM=0.307 tol=18.5
2024-12-07 22:04:02,187 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=27.1 pTM=0.243 ipTM=0.321 tol=13.9
2024-12-07 22:06:55,487 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=27.1 pTM=0.244 ipTM=0.324 tol=14.6
2024-12-07 22:09:48,818 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=27.3 pTM=0.245 ipTM=0.326 tol=13.2
2024-12-07 22:12:42,221 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=26.9 pTM=0.241 ipTM=0.309 tol=12.8
2024-12-07 22:15:35,692 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=27.1 pTM=0.238 ipTM=0.304 tol=18.4
2024-12-07 22:18:29,151 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=27 pTM=0.242 ipTM=0.314 tol=20
2024-12-07 22:21:22,404 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=27.1 pTM=0.241 ipTM=0.315 tol=16.3
2024-12-07 22:24:15,554 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=27.2 pTM=0.239 ipTM=0.306 tol=18.7
2024-12-07 22:27:08,810 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=27.2 pTM=0.238 ipTM=0.307 tol=17.1
2024-12-07 22:30:02,244 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=27.2 pTM=0.239 ipTM=0.307 tol=13.5
2024-12-07 22:32:55,685 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=27.3 pTM=0.24 ipTM=0.314 tol=14.4
2024-12-07 22:35:49,054 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=27.1 pTM=0.245 ipTM=0.33 tol=22.6
2024-12-07 22:38:42,368 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=27.1 pTM=0.245 ipTM=0.333 tol=21.7
2024-12-07 22:41:35,744 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=27.2 pTM=0.246 ipTM=0.34 tol=16.9
2024-12-07 22:44:29,139 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=27.7 pTM=0.246 ipTM=0.341 tol=22.5
2024-12-07 22:47:22,630 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=27.3 pTM=0.247 ipTM=0.345 tol=19.2
2024-12-07 22:50:15,981 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=27.5 pTM=0.248 ipTM=0.342 tol=14.5
2024-12-07 22:53:09,311 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=27.3 pTM=0.244 ipTM=0.333 tol=19.5
2024-12-07 22:56:02,771 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=27.3 pTM=0.244 ipTM=0.329 tol=13.2
2024-12-07 22:58:56,153 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=27.2 pTM=0.245 ipTM=0.334 tol=20.5
2024-12-07 23:01:49,628 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=27.2 pTM=0.245 ipTM=0.336 tol=20
2024-12-07 23:04:43,056 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=27.4 pTM=0.248 ipTM=0.342 tol=21.6
2024-12-07 23:07:36,500 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=27.4 pTM=0.246 ipTM=0.331 tol=19.3
2024-12-07 23:10:29,990 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=27.4 pTM=0.246 ipTM=0.33 tol=20.9
2024-12-07 23:13:23,428 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=27.4 pTM=0.249 ipTM=0.342 tol=19.6
2024-12-07 23:13:23,430 alphafold2_multimer_v3_model_4_seed_000 took 5373.3s (30 recycles)
2024-12-07 23:16:19,047 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=26.9 pTM=0.217 ipTM=0.244
2024-12-07 23:19:12,692 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=27.4 pTM=0.216 ipTM=0.215 tol=29.1
2024-12-07 23:22:06,575 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=27.7 pTM=0.214 ipTM=0.204 tol=26.8
2024-12-07 23:25:00,373 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=27.8 pTM=0.219 ipTM=0.227 tol=27
2024-12-07 23:27:54,049 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=27.6 pTM=0.217 ipTM=0.221 tol=15
2024-12-07 23:30:47,770 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=28.1 pTM=0.219 ipTM=0.225 tol=24.1
2024-12-07 23:33:41,575 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=28 pTM=0.219 ipTM=0.227 tol=28.1
2024-12-07 23:36:35,368 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=27.7 pTM=0.217 ipTM=0.22 tol=22.6
2024-12-07 23:39:29,170 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=28 pTM=0.219 ipTM=0.229 tol=15.7
2024-12-07 23:42:23,026 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=28.2 pTM=0.216 ipTM=0.213 tol=15.7
2024-12-07 23:45:16,866 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=28.3 pTM=0.216 ipTM=0.216 tol=15.6
2024-12-07 23:48:10,654 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=28.1 pTM=0.22 ipTM=0.227 tol=13
2024-12-07 23:51:04,508 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=28.5 pTM=0.22 ipTM=0.233 tol=11.9
2024-12-07 23:53:58,270 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=28.4 pTM=0.22 ipTM=0.233 tol=9.88
2024-12-07 23:56:52,057 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=28.4 pTM=0.22 ipTM=0.229 tol=9.09
2024-12-07 23:59:45,878 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=28.5 pTM=0.219 ipTM=0.228 tol=10.1
2024-12-08 00:02:39,556 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=28.5 pTM=0.222 ipTM=0.235 tol=24.3
2024-12-08 00:05:33,262 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=28.1 pTM=0.225 ipTM=0.248 tol=24.5
2024-12-08 00:08:26,985 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=28.2 pTM=0.228 ipTM=0.262 tol=23.1
2024-12-08 00:11:20,690 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=28.5 pTM=0.236 ipTM=0.326 tol=24.1
2024-12-08 00:14:14,525 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=28.6 pTM=0.236 ipTM=0.323 tol=16.2
2024-12-08 00:17:08,257 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=28.6 pTM=0.233 ipTM=0.294 tol=26.1
2024-12-08 00:20:02,041 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=28.7 pTM=0.24 ipTM=0.353 tol=26.2
2024-12-08 00:22:55,862 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=28.7 pTM=0.235 ipTM=0.317 tol=16.4
2024-12-08 00:25:49,593 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=28.4 pTM=0.232 ipTM=0.279 tol=13.6
2024-12-08 00:28:43,286 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=28.6 pTM=0.228 ipTM=0.255 tol=15.6
2024-12-08 00:31:36,974 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=28.6 pTM=0.238 ipTM=0.302 tol=15.9
2024-12-08 00:34:30,659 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=28.9 pTM=0.246 ipTM=0.347 tol=28.8
2024-12-08 00:37:24,484 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=28.9 pTM=0.245 ipTM=0.341 tol=15.3
2024-12-08 00:40:18,205 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=29.5 pTM=0.252 ipTM=0.371 tol=23.6
2024-12-08 00:43:11,957 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=29.4 pTM=0.251 ipTM=0.373 tol=20.1
2024-12-08 00:43:11,959 alphafold2_multimer_v3_model_5_seed_000 took 5386.1s (30 recycles)
2024-12-08 00:43:14,412 reranking models by 'multimer' metric
2024-12-08 00:43:18,790 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-08 00:49:39,959 Relaxation took 385.5s
2024-12-08 00:49:39,959 rank_001_alphafold2_multimer_v3_model_5_seed_000 pLDDT=29.4 pTM=0.251 ipTM=0.373
2024-12-08 01:02:14,358 Relaxation took 754.4s
2024-12-08 01:02:14,359 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=27.4 pTM=0.249 ipTM=0.342
2024-12-08 01:08:11,120 Relaxation took 356.8s
2024-12-08 01:08:11,120 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=28.1 pTM=0.233 ipTM=0.312
2024-12-08 01:14:54,283 Relaxation took 403.2s
2024-12-08 01:14:54,283 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=27.2 pTM=0.232 ipTM=0.275
2024-12-08 01:22:46,553 Relaxation took 472.3s
2024-12-08 01:22:46,554 rank_005_alphafold2_multimer_v3_model_3_seed_000 pLDDT=28.2 pTM=0.221 ipTM=0.239
2024-12-08 01:22:52,108 Done