2024-12-07 17:12:21,749 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-07 17:12:22,034 Running on GPU
2024-12-07 17:12:24,039 Found 6 citations for tools or databases
2024-12-07 17:12:24,039 Query 1/1: RBBP6_CLK2 (length 2291)
2024-12-07 17:12:24,309 Sleeping for 8s. Reason: PENDING
2024-12-07 17:12:32,573 Sleeping for 6s. Reason: RUNNING
2024-12-07 17:12:38,833 Sleeping for 8s. Reason: RUNNING
2024-12-07 17:12:47,104 Sleeping for 9s. Reason: RUNNING
2024-12-07 17:12:56,377 Sleeping for 10s. Reason: RUNNING
2024-12-07 17:13:06,649 Sleeping for 8s. Reason: RUNNING
2024-12-07 17:13:14,914 Sleeping for 10s. Reason: RUNNING
2024-12-07 17:13:25,173 Sleeping for 6s. Reason: RUNNING
2024-12-07 17:13:31,442 Sleeping for 9s. Reason: RUNNING
2024-12-07 17:13:40,697 Sleeping for 6s. Reason: RUNNING
2024-12-07 17:13:46,956 Sleeping for 7s. Reason: RUNNING
2024-12-07 17:13:54,221 Sleeping for 8s. Reason: RUNNING
2024-12-07 17:14:02,484 Sleeping for 6s. Reason: RUNNING
2024-12-07 17:14:08,742 Sleeping for 9s. Reason: RUNNING
2024-12-07 17:14:17,995 Sleeping for 8s. Reason: RUNNING
2024-12-07 17:14:26,254 Sleeping for 6s. Reason: RUNNING
2024-12-07 17:14:32,511 Sleeping for 10s. Reason: RUNNING
2024-12-07 17:14:42,778 Sleeping for 10s. Reason: RUNNING
2024-12-07 17:14:53,039 Sleeping for 6s. Reason: RUNNING
2024-12-07 17:14:59,297 Sleeping for 5s. Reason: RUNNING
2024-12-07 17:15:04,551 Sleeping for 7s. Reason: RUNNING
2024-12-07 17:15:11,807 Sleeping for 9s. Reason: RUNNING
2024-12-07 17:15:21,066 Sleeping for 6s. Reason: RUNNING
2024-12-07 17:15:27,328 Sleeping for 10s. Reason: RUNNING
2024-12-07 17:15:37,585 Sleeping for 8s. Reason: RUNNING
2024-12-07 17:15:47,855 Sleeping for 8s. Reason: PENDING
2024-12-07 17:15:56,125 Sleeping for 8s. Reason: RUNNING
2024-12-07 17:16:04,390 Sleeping for 9s. Reason: RUNNING
2024-12-07 17:16:13,658 Sleeping for 5s. Reason: RUNNING
2024-12-07 17:16:18,923 Sleeping for 9s. Reason: RUNNING
2024-12-07 17:16:28,183 Sleeping for 5s. Reason: RUNNING
2024-12-07 17:16:33,442 Sleeping for 8s. Reason: RUNNING
2024-12-07 17:16:41,699 Sleeping for 6s. Reason: RUNNING
2024-12-07 17:16:47,953 Sleeping for 8s. Reason: RUNNING
2024-12-07 17:16:56,207 Sleeping for 8s. Reason: RUNNING
2024-12-07 17:17:04,469 Sleeping for 9s. Reason: RUNNING
2024-12-07 17:17:13,733 Sleeping for 8s. Reason: RUNNING
2024-12-07 17:17:21,994 Sleeping for 9s. Reason: RUNNING
2024-12-07 17:17:31,250 Sleeping for 8s. Reason: RUNNING
2024-12-07 17:17:39,513 Sleeping for 10s. Reason: RUNNING
2024-12-07 17:17:49,775 Sleeping for 6s. Reason: RUNNING
2024-12-07 17:17:56,029 Sleeping for 5s. Reason: RUNNING
2024-12-07 17:18:01,283 Sleeping for 9s. Reason: RUNNING
2024-12-07 17:18:10,545 Sleeping for 7s. Reason: RUNNING
2024-12-07 17:18:17,806 Sleeping for 9s. Reason: RUNNING
2024-12-07 17:18:27,069 Sleeping for 10s. Reason: RUNNING
2024-12-07 17:18:44,437 Setting max_seq=508, max_extra_seq=2048
2024-12-07 17:25:31,591 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=32.8 pTM=0.333 ipTM=0.347
2024-12-07 17:29:22,938 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=33.2 pTM=0.332 ipTM=0.281 tol=20.7
2024-12-07 17:33:14,194 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=33.2 pTM=0.335 ipTM=0.308 tol=12.4
2024-12-07 17:37:05,407 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=33.1 pTM=0.332 ipTM=0.381 tol=9.52
2024-12-07 17:40:56,713 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=33.1 pTM=0.332 ipTM=0.373 tol=8.84
2024-12-07 17:44:48,049 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=33.2 pTM=0.33 ipTM=0.363 tol=9.6
2024-12-07 17:48:39,406 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=33.1 pTM=0.331 ipTM=0.365 tol=9.71
2024-12-07 17:52:30,667 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=33.2 pTM=0.331 ipTM=0.376 tol=6.53
2024-12-07 17:56:21,953 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=33 pTM=0.333 ipTM=0.37 tol=9.22
2024-12-07 18:00:13,287 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=33.4 pTM=0.34 ipTM=0.429 tol=9.05
2024-12-07 18:04:04,700 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=33.4 pTM=0.338 ipTM=0.439 tol=7.66
2024-12-07 18:07:56,045 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=33.9 pTM=0.344 ipTM=0.546 tol=9.34
2024-12-07 18:11:47,308 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=33.9 pTM=0.346 ipTM=0.51 tol=8.17
2024-12-07 18:15:38,731 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=34 pTM=0.347 ipTM=0.526 tol=7.6
2024-12-07 18:19:30,062 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=34 pTM=0.349 ipTM=0.524 tol=6.73
2024-12-07 18:23:21,515 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=34.2 pTM=0.351 ipTM=0.546 tol=17.3
2024-12-07 18:27:12,818 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=34.2 pTM=0.352 ipTM=0.534 tol=16.2
2024-12-07 18:31:04,159 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=34.3 pTM=0.35 ipTM=0.554 tol=11.9
2024-12-07 18:34:55,572 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=34.3 pTM=0.349 ipTM=0.547 tol=10.5
2024-12-07 18:38:46,823 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=34.5 pTM=0.354 ipTM=0.543 tol=8.2
2024-12-07 18:42:38,170 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=34.2 pTM=0.353 ipTM=0.542 tol=7.92
2024-12-07 18:46:29,331 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=34.4 pTM=0.351 ipTM=0.547 tol=7.46
2024-12-07 18:50:20,539 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=34.3 pTM=0.351 ipTM=0.542 tol=8.16
2024-12-07 18:54:11,710 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=34.3 pTM=0.352 ipTM=0.535 tol=7.46
2024-12-07 18:58:02,869 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=34.3 pTM=0.352 ipTM=0.532 tol=6.04
2024-12-07 19:01:54,141 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=34.4 pTM=0.353 ipTM=0.542 tol=6.77
2024-12-07 19:05:45,355 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=34.2 pTM=0.35 ipTM=0.528 tol=6.82
2024-12-07 19:09:36,557 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=34.2 pTM=0.351 ipTM=0.551 tol=6.45
2024-12-07 19:13:27,754 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=34.4 pTM=0.351 ipTM=0.555 tol=5.18
2024-12-07 19:17:18,973 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=34.5 pTM=0.354 ipTM=0.55 tol=5.7
2024-12-07 19:21:10,186 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=34.5 pTM=0.352 ipTM=0.558 tol=5
2024-12-07 19:21:10,188 alphafold2_multimer_v3_model_1_seed_000 took 7342.3s (30 recycles)
2024-12-07 19:25:04,362 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=32.5 pTM=0.33 ipTM=0.533
2024-12-07 19:28:55,771 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=34.2 pTM=0.339 ipTM=0.628 tol=27.9
2024-12-07 19:32:47,101 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=34.4 pTM=0.341 ipTM=0.545 tol=17.2
2024-12-07 19:36:38,546 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=34.8 pTM=0.343 ipTM=0.527 tol=14.7
2024-12-07 19:40:30,070 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=35 pTM=0.343 ipTM=0.573 tol=13.1
2024-12-07 19:44:21,526 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=35 pTM=0.343 ipTM=0.5 tol=11
2024-12-07 19:48:12,970 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=35.1 pTM=0.344 ipTM=0.521 tol=9.21
2024-12-07 19:52:04,536 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=35.1 pTM=0.346 ipTM=0.531 tol=8.91
2024-12-07 19:55:55,966 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=34.9 pTM=0.345 ipTM=0.496 tol=8.43
2024-12-07 19:59:47,449 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=35.1 pTM=0.346 ipTM=0.5 tol=8.26
2024-12-07 20:03:38,904 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=35.1 pTM=0.348 ipTM=0.484 tol=8.97
2024-12-07 20:07:30,275 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=35.2 pTM=0.348 ipTM=0.497 tol=8.55
2024-12-07 20:11:21,667 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=35.4 pTM=0.352 ipTM=0.5 tol=7.81
2024-12-07 20:15:13,075 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=35.5 pTM=0.355 ipTM=0.493 tol=8.09
2024-12-07 20:19:04,658 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=35.3 pTM=0.354 ipTM=0.504 tol=7.9
2024-12-07 20:22:56,148 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=35.3 pTM=0.352 ipTM=0.482 tol=11.7
2024-12-07 20:26:47,571 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=35.4 pTM=0.353 ipTM=0.486 tol=10.2
2024-12-07 20:30:39,184 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=35.5 pTM=0.356 ipTM=0.492 tol=6.57
2024-12-07 20:34:30,740 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=35.2 pTM=0.353 ipTM=0.485 tol=6.43
2024-12-07 20:38:22,267 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=35.6 pTM=0.357 ipTM=0.492 tol=5.58
2024-12-07 20:42:13,836 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=35.3 pTM=0.355 ipTM=0.494 tol=5.48
2024-12-07 20:46:05,461 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=35.5 pTM=0.356 ipTM=0.491 tol=6.21
2024-12-07 20:49:56,909 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=35.4 pTM=0.353 ipTM=0.486 tol=7.01
2024-12-07 20:53:48,401 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=35.4 pTM=0.354 ipTM=0.486 tol=6.26
2024-12-07 20:57:40,013 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=35.7 pTM=0.358 ipTM=0.531 tol=7.75
2024-12-07 21:01:31,473 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=35.7 pTM=0.36 ipTM=0.522 tol=6.55
2024-12-07 21:05:23,023 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=35.4 pTM=0.355 ipTM=0.494 tol=6.49
2024-12-07 21:09:14,505 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=35.3 pTM=0.355 ipTM=0.5 tol=6.72
2024-12-07 21:13:06,095 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=35.4 pTM=0.355 ipTM=0.505 tol=5.87
2024-12-07 21:16:57,615 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=35.5 pTM=0.356 ipTM=0.509 tol=5.35
2024-12-07 21:20:49,077 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=35.5 pTM=0.354 ipTM=0.513 tol=5.62
2024-12-07 21:20:49,080 alphafold2_multimer_v3_model_2_seed_000 took 7175.8s (30 recycles)
2024-12-07 21:24:44,144 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=33.2 pTM=0.321 ipTM=0.275
2024-12-07 21:28:36,641 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=32.9 pTM=0.32 ipTM=0.323 tol=22.3
2024-12-07 21:32:29,394 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=32.9 pTM=0.321 ipTM=0.307 tol=14.4
2024-12-07 21:36:22,235 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=33.2 pTM=0.323 ipTM=0.327 tol=9.9
2024-12-07 21:40:14,865 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=33.3 pTM=0.322 ipTM=0.347 tol=8.66
2024-12-07 21:44:07,480 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=33 pTM=0.322 ipTM=0.342 tol=12.3
2024-12-07 21:48:00,244 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=32.9 pTM=0.321 ipTM=0.342 tol=11.4
2024-12-07 21:51:53,070 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=33 pTM=0.323 ipTM=0.345 tol=10.1
2024-12-07 21:55:45,974 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=33.2 pTM=0.323 ipTM=0.344 tol=9.39
2024-12-07 21:59:38,818 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=33.4 pTM=0.321 ipTM=0.345 tol=9.27
2024-12-07 22:03:31,601 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=33.4 pTM=0.322 ipTM=0.348 tol=7.9
2024-12-07 22:07:24,474 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=33.3 pTM=0.322 ipTM=0.334 tol=6.69
2024-12-07 22:11:17,348 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=33.3 pTM=0.323 ipTM=0.341 tol=7.15
2024-12-07 22:15:10,283 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=33.3 pTM=0.322 ipTM=0.34 tol=6.54
2024-12-07 22:19:03,233 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=33.3 pTM=0.321 ipTM=0.342 tol=6.07
2024-12-07 22:22:55,968 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=33.3 pTM=0.321 ipTM=0.343 tol=6.25
2024-12-07 22:26:48,816 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=33.3 pTM=0.322 ipTM=0.337 tol=8.38
2024-12-07 22:30:41,693 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=33.1 pTM=0.321 ipTM=0.342 tol=11.7
2024-12-07 22:34:34,605 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=33 pTM=0.321 ipTM=0.342 tol=10.7
2024-12-07 22:38:27,426 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=33.2 pTM=0.323 ipTM=0.332 tol=6.89
2024-12-07 22:42:20,355 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=33.2 pTM=0.322 ipTM=0.352 tol=6.7
2024-12-07 22:46:13,274 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=33.2 pTM=0.321 ipTM=0.331 tol=11
2024-12-07 22:50:06,135 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=33.1 pTM=0.322 ipTM=0.343 tol=8.03
2024-12-07 22:53:58,975 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=33.2 pTM=0.323 ipTM=0.333 tol=8.48
2024-12-07 22:57:51,835 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=33.3 pTM=0.322 ipTM=0.334 tol=9.03
2024-12-07 23:01:44,777 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=33.2 pTM=0.322 ipTM=0.328 tol=9.59
2024-12-07 23:05:37,745 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=33.1 pTM=0.322 ipTM=0.348 tol=8.95
2024-12-07 23:09:30,672 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=33.1 pTM=0.322 ipTM=0.346 tol=10.8
2024-12-07 23:13:23,772 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=33.4 pTM=0.322 ipTM=0.333 tol=11.6
2024-12-07 23:17:16,564 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=33.2 pTM=0.321 ipTM=0.335 tol=13.5
2024-12-07 23:21:09,363 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=33.1 pTM=0.322 ipTM=0.348 tol=10.9
2024-12-07 23:21:09,366 alphafold2_multimer_v3_model_3_seed_000 took 7217.3s (30 recycles)
2024-12-07 23:25:04,382 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=32.1 pTM=0.317 ipTM=0.26
2024-12-07 23:28:57,754 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=31.7 pTM=0.327 ipTM=0.412 tol=25
2024-12-07 23:32:51,038 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=31.6 pTM=0.324 ipTM=0.444 tol=18.2
2024-12-07 23:36:44,372 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=31.3 pTM=0.325 ipTM=0.453 tol=16.6
2024-12-07 23:40:37,759 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=31.3 pTM=0.325 ipTM=0.44 tol=16.2
2024-12-07 23:44:31,173 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=31.3 pTM=0.325 ipTM=0.432 tol=15.5
2024-12-07 23:48:24,644 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=31.4 pTM=0.325 ipTM=0.435 tol=13.9
2024-12-07 23:52:18,082 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=31.2 pTM=0.326 ipTM=0.464 tol=13.2
2024-12-07 23:56:11,596 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=31.2 pTM=0.327 ipTM=0.448 tol=17.4
2024-12-08 00:00:05,170 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=31.4 pTM=0.323 ipTM=0.458 tol=15.9
2024-12-08 00:03:58,398 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=31.3 pTM=0.326 ipTM=0.417 tol=15.8
2024-12-08 00:07:51,952 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=31.5 pTM=0.325 ipTM=0.439 tol=17.1
2024-12-08 00:11:45,519 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=31.4 pTM=0.325 ipTM=0.449 tol=18.4
2024-12-08 00:15:39,053 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=31.5 pTM=0.325 ipTM=0.465 tol=15.9
2024-12-08 00:19:32,629 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=31.4 pTM=0.326 ipTM=0.463 tol=12.9
2024-12-08 00:23:26,307 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=31.5 pTM=0.326 ipTM=0.466 tol=12.3
2024-12-08 00:27:19,862 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=31.5 pTM=0.328 ipTM=0.464 tol=21
2024-12-08 00:31:13,503 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=31.6 pTM=0.326 ipTM=0.47 tol=19.1
2024-12-08 00:35:07,086 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=31.5 pTM=0.325 ipTM=0.443 tol=14.6
2024-12-08 00:39:00,676 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=31.7 pTM=0.325 ipTM=0.464 tol=14.2
2024-12-08 00:42:54,190 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=31.4 pTM=0.326 ipTM=0.456 tol=13.3
2024-12-08 00:46:47,662 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=31.8 pTM=0.325 ipTM=0.453 tol=15.6
2024-12-08 00:50:41,048 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=31.5 pTM=0.326 ipTM=0.452 tol=13
2024-12-08 00:54:34,464 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=31.5 pTM=0.329 ipTM=0.442 tol=19
2024-12-08 00:58:27,940 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=31.4 pTM=0.326 ipTM=0.453 tol=21
2024-12-08 01:02:21,455 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=31.5 pTM=0.324 ipTM=0.448 tol=17.1
2024-12-08 01:06:15,008 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=31.4 pTM=0.327 ipTM=0.445 tol=15.2
2024-12-08 01:10:08,371 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=31.6 pTM=0.325 ipTM=0.465 tol=16.5
2024-12-08 01:14:01,908 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=31.7 pTM=0.326 ipTM=0.464 tol=20.9
2024-12-08 01:17:55,297 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=31.8 pTM=0.326 ipTM=0.477 tol=18.2
2024-12-08 01:21:48,896 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=31.7 pTM=0.327 ipTM=0.472 tol=18.6
2024-12-08 01:21:48,899 alphafold2_multimer_v3_model_4_seed_000 took 7236.5s (30 recycles)
2024-12-08 01:25:44,811 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=32.8 pTM=0.321 ipTM=0.404
2024-12-08 01:29:38,227 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=33.1 pTM=0.324 ipTM=0.54 tol=33.2
2024-12-08 01:33:31,664 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=32.9 pTM=0.324 ipTM=0.458 tol=28
2024-12-08 01:37:25,155 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=33.1 pTM=0.326 ipTM=0.417 tol=18.7
2024-12-08 01:41:18,620 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=33.5 pTM=0.328 ipTM=0.465 tol=23.5
2024-12-08 01:45:12,064 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=33.5 pTM=0.326 ipTM=0.461 tol=18.1
2024-12-08 01:49:05,600 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=33.5 pTM=0.326 ipTM=0.445 tol=15.4
2024-12-08 01:52:59,076 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=33.6 pTM=0.331 ipTM=0.465 tol=16.6
2024-12-08 01:56:52,513 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=33.3 pTM=0.33 ipTM=0.463 tol=13.1
2024-12-08 02:00:46,117 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=33.5 pTM=0.328 ipTM=0.443 tol=22.8
2024-12-08 02:04:39,646 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=33.4 pTM=0.324 ipTM=0.408 tol=14.8
2024-12-08 02:08:33,117 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=33.5 pTM=0.325 ipTM=0.411 tol=12.6
2024-12-08 02:12:26,565 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=33.5 pTM=0.326 ipTM=0.453 tol=20.5
2024-12-08 02:16:19,994 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=33.5 pTM=0.326 ipTM=0.499 tol=18.6
2024-12-08 02:20:13,474 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=33.6 pTM=0.327 ipTM=0.509 tol=20.5
2024-12-08 02:24:06,997 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=33.6 pTM=0.329 ipTM=0.507 tol=13.4
2024-12-08 02:28:00,451 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=33.4 pTM=0.331 ipTM=0.493 tol=20.5
2024-12-08 02:31:54,073 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=33.4 pTM=0.326 ipTM=0.448 tol=18.1
2024-12-08 02:35:47,701 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=33.5 pTM=0.324 ipTM=0.438 tol=20.1
2024-12-08 02:39:41,400 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=33.6 pTM=0.325 ipTM=0.437 tol=11.5
2024-12-08 02:43:35,049 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=33.4 pTM=0.325 ipTM=0.452 tol=12.3
2024-12-08 02:47:28,609 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=33.5 pTM=0.324 ipTM=0.437 tol=21
2024-12-08 02:51:22,159 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=33.5 pTM=0.324 ipTM=0.459 tol=22.8
2024-12-08 02:55:15,820 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=33.4 pTM=0.326 ipTM=0.453 tol=20.5
2024-12-08 02:59:09,452 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=33.5 pTM=0.33 ipTM=0.475 tol=15.3
2024-12-08 03:03:03,027 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=33.6 pTM=0.325 ipTM=0.441 tol=20.3
2024-12-08 03:06:56,585 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=33.4 pTM=0.324 ipTM=0.443 tol=12.8
2024-12-08 03:10:50,261 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=33.6 pTM=0.324 ipTM=0.465 tol=12.8
2024-12-08 03:14:43,931 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=33.8 pTM=0.324 ipTM=0.47 tol=12.7
2024-12-08 03:18:37,552 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=33.6 pTM=0.324 ipTM=0.471 tol=11.8
2024-12-08 03:22:31,191 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=33.5 pTM=0.324 ipTM=0.449 tol=11.4
2024-12-08 03:22:31,194 alphafold2_multimer_v3_model_5_seed_000 took 7239.3s (30 recycles)
2024-12-08 03:22:34,211 reranking models by 'multimer' metric
2024-12-08 03:22:38,836 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-08 03:32:16,755 Relaxation took 582.5s
2024-12-08 03:32:16,755 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=34.5 pTM=0.352 ipTM=0.558
2024-12-08 03:39:26,312 Relaxation took 429.6s
2024-12-08 03:39:26,312 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=35.5 pTM=0.354 ipTM=0.513
2024-12-08 03:51:19,874 Relaxation took 713.6s
2024-12-08 03:51:19,875 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=31.7 pTM=0.327 ipTM=0.472
2024-12-08 03:59:57,091 Relaxation took 517.2s
2024-12-08 03:59:57,091 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=33.5 pTM=0.324 ipTM=0.449
2024-12-08 04:09:46,431 Relaxation took 589.3s
2024-12-08 04:09:46,431 rank_005_alphafold2_multimer_v3_model_3_seed_000 pLDDT=33.1 pTM=0.322 ipTM=0.348
2024-12-08 04:09:52,969 Done