2024-12-07 17:21:57,375 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-07 17:21:57,753 Running on GPU
2024-12-07 17:22:01,595 Found 6 citations for tools or databases
2024-12-07 17:22:01,595 Query 1/1: RBBP6_CLK3 (length 2282)
2024-12-07 17:22:01,949 Sleeping for 8s. Reason: PENDING
2024-12-07 17:22:10,211 Sleeping for 6s. Reason: RUNNING
2024-12-07 17:22:16,467 Sleeping for 8s. Reason: RUNNING
2024-12-07 17:22:24,724 Sleeping for 6s. Reason: RUNNING
2024-12-07 17:22:30,981 Sleeping for 6s. Reason: RUNNING
2024-12-07 17:22:37,247 Sleeping for 8s. Reason: RUNNING
2024-12-07 17:22:45,521 Sleeping for 6s. Reason: RUNNING
2024-12-07 17:22:51,779 Sleeping for 10s. Reason: RUNNING
2024-12-07 17:23:02,048 Sleeping for 8s. Reason: RUNNING
2024-12-07 17:23:10,307 Sleeping for 7s. Reason: RUNNING
2024-12-07 17:23:17,569 Sleeping for 5s. Reason: RUNNING
2024-12-07 17:23:22,821 Sleeping for 5s. Reason: RUNNING
2024-12-07 17:23:28,092 Sleeping for 7s. Reason: RUNNING
2024-12-07 17:23:35,351 Sleeping for 5s. Reason: RUNNING
2024-12-07 17:23:40,622 Sleeping for 7s. Reason: RUNNING
2024-12-07 17:23:47,883 Sleeping for 10s. Reason: RUNNING
2024-12-07 17:23:58,144 Sleeping for 5s. Reason: RUNNING
2024-12-07 17:24:03,407 Sleeping for 7s. Reason: RUNNING
2024-12-07 17:24:10,667 Sleeping for 9s. Reason: RUNNING
2024-12-07 17:24:19,926 Sleeping for 6s. Reason: RUNNING
2024-12-07 17:24:26,186 Sleeping for 7s. Reason: RUNNING
2024-12-07 17:24:33,448 Sleeping for 10s. Reason: RUNNING
2024-12-07 17:24:43,712 Sleeping for 5s. Reason: RUNNING
2024-12-07 17:24:48,971 Sleeping for 5s. Reason: RUNNING
2024-12-07 17:24:54,228 Sleeping for 10s. Reason: RUNNING
2024-12-07 17:25:04,492 Sleeping for 6s. Reason: RUNNING
2024-12-07 17:25:10,765 Sleeping for 8s. Reason: RUNNING
2024-12-07 17:25:19,026 Sleeping for 9s. Reason: RUNNING
2024-12-07 17:25:30,505 Sleeping for 6s. Reason: PENDING
2024-12-07 17:25:36,765 Sleeping for 8s. Reason: RUNNING
2024-12-07 17:25:45,022 Sleeping for 5s. Reason: RUNNING
2024-12-07 17:25:50,280 Sleeping for 6s. Reason: RUNNING
2024-12-07 17:25:56,538 Sleeping for 8s. Reason: RUNNING
2024-12-07 17:26:04,803 Sleeping for 6s. Reason: RUNNING
2024-12-07 17:26:11,056 Sleeping for 10s. Reason: RUNNING
2024-12-07 17:26:21,313 Sleeping for 5s. Reason: RUNNING
2024-12-07 17:26:26,566 Sleeping for 7s. Reason: RUNNING
2024-12-07 17:26:33,827 Sleeping for 9s. Reason: RUNNING
2024-12-07 17:26:43,094 Sleeping for 5s. Reason: RUNNING
2024-12-07 17:26:48,352 Sleeping for 6s. Reason: RUNNING
2024-12-07 17:26:54,608 Sleeping for 8s. Reason: RUNNING
2024-12-07 17:27:02,867 Sleeping for 10s. Reason: RUNNING
2024-12-07 17:27:13,127 Sleeping for 5s. Reason: RUNNING
2024-12-07 17:27:18,389 Sleeping for 6s. Reason: RUNNING
2024-12-07 17:27:24,651 Sleeping for 5s. Reason: RUNNING
2024-12-07 17:27:29,911 Sleeping for 5s. Reason: RUNNING
2024-12-07 17:27:43,670 Setting max_seq=508, max_extra_seq=2048
2024-12-07 17:34:09,419 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=33.7 pTM=0.342 ipTM=0.486
2024-12-07 17:36:56,467 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=34.1 pTM=0.349 ipTM=0.523 tol=18.8
2024-12-07 17:39:43,500 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=34 pTM=0.342 ipTM=0.376 tol=11.9
2024-12-07 17:42:30,624 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=33.7 pTM=0.343 ipTM=0.369 tol=8.03
2024-12-07 17:45:17,879 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=33.8 pTM=0.343 ipTM=0.379 tol=14.2
2024-12-07 17:48:05,154 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=34 pTM=0.347 ipTM=0.488 tol=13
2024-12-07 17:50:52,455 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=34.1 pTM=0.346 ipTM=0.481 tol=10
2024-12-07 17:53:39,738 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=34.1 pTM=0.347 ipTM=0.504 tol=6.98
2024-12-07 17:56:27,008 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=34.1 pTM=0.347 ipTM=0.477 tol=6.69
2024-12-07 17:59:14,190 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=34.1 pTM=0.348 ipTM=0.502 tol=7.64
2024-12-07 18:02:01,442 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=34 pTM=0.349 ipTM=0.48 tol=8.04
2024-12-07 18:04:48,576 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=34.2 pTM=0.351 ipTM=0.525 tol=7.16
2024-12-07 18:07:35,733 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=34.2 pTM=0.352 ipTM=0.518 tol=13.9
2024-12-07 18:10:22,916 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=34.2 pTM=0.35 ipTM=0.494 tol=11.9
2024-12-07 18:13:10,361 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=34 pTM=0.348 ipTM=0.487 tol=15.3
2024-12-07 18:15:57,492 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=34.3 pTM=0.35 ipTM=0.538 tol=14.8
2024-12-07 18:18:44,532 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=34.1 pTM=0.347 ipTM=0.482 tol=9.3
2024-12-07 18:21:31,602 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=34.3 pTM=0.35 ipTM=0.531 tol=9.94
2024-12-07 18:24:18,707 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=34.3 pTM=0.349 ipTM=0.531 tol=9.53
2024-12-07 18:27:05,805 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=34.5 pTM=0.352 ipTM=0.518 tol=7.77
2024-12-07 18:29:53,128 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=34.2 pTM=0.352 ipTM=0.494 tol=8.66
2024-12-07 18:32:40,281 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=34.4 pTM=0.351 ipTM=0.507 tol=8.26
2024-12-07 18:35:27,549 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=33.8 pTM=0.349 ipTM=0.495 tol=28.1
2024-12-07 18:38:14,678 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=34.2 pTM=0.349 ipTM=0.483 tol=23
2024-12-07 18:41:01,878 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=34.4 pTM=0.35 ipTM=0.501 tol=11.7
2024-12-07 18:43:49,128 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=34.4 pTM=0.349 ipTM=0.49 tol=9.69
2024-12-07 18:46:36,334 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=34.2 pTM=0.348 ipTM=0.492 tol=6.56
2024-12-07 18:49:23,523 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=34.2 pTM=0.348 ipTM=0.487 tol=5.79
2024-12-07 18:52:10,552 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=34.4 pTM=0.351 ipTM=0.518 tol=13
2024-12-07 18:54:57,634 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=34.5 pTM=0.351 ipTM=0.502 tol=12.2
2024-12-07 18:57:44,655 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=34.3 pTM=0.35 ipTM=0.49 tol=8.71
2024-12-07 18:57:44,658 alphafold2_multimer_v3_model_1_seed_000 took 5393.9s (30 recycles)
2024-12-07 19:00:35,313 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=32.8 pTM=0.33 ipTM=0.304
2024-12-07 19:03:22,634 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=34.2 pTM=0.338 ipTM=0.537 tol=21.4
2024-12-07 19:06:09,969 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=34.6 pTM=0.341 ipTM=0.526 tol=15.2
2024-12-07 19:08:57,285 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=34.6 pTM=0.346 ipTM=0.595 tol=16.3
2024-12-07 19:11:44,488 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=34.4 pTM=0.34 ipTM=0.448 tol=12.3
2024-12-07 19:14:31,783 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=34.5 pTM=0.337 ipTM=0.416 tol=10.7
2024-12-07 19:17:18,926 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=34.4 pTM=0.337 ipTM=0.373 tol=10.3
2024-12-07 19:20:06,113 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=34.8 pTM=0.343 ipTM=0.551 tol=12.2
2024-12-07 19:22:53,317 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=34.5 pTM=0.339 ipTM=0.418 tol=10.4
2024-12-07 19:25:40,598 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=34.7 pTM=0.334 ipTM=0.345 tol=10.9
2024-12-07 19:28:28,033 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=34.6 pTM=0.335 ipTM=0.358 tol=8.91
2024-12-07 19:31:15,523 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=34.8 pTM=0.339 ipTM=0.48 tol=10.1
2024-12-07 19:34:02,863 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=34.7 pTM=0.336 ipTM=0.386 tol=7.97
2024-12-07 19:36:50,062 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=34.8 pTM=0.334 ipTM=0.356 tol=6.83
2024-12-07 19:39:37,214 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=34.7 pTM=0.334 ipTM=0.383 tol=6.92
2024-12-07 19:42:24,605 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=34.9 pTM=0.341 ipTM=0.584 tol=8.5
2024-12-07 19:45:12,022 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=34.7 pTM=0.336 ipTM=0.441 tol=6.75
2024-12-07 19:47:59,433 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=34.7 pTM=0.335 ipTM=0.42 tol=7.57
2024-12-07 19:50:46,997 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=34.8 pTM=0.336 ipTM=0.449 tol=6.37
2024-12-07 19:53:34,378 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=35 pTM=0.34 ipTM=0.596 tol=6.15
2024-12-07 19:56:21,714 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=34.9 pTM=0.339 ipTM=0.525 tol=5.57
2024-12-07 19:59:09,277 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=34.8 pTM=0.336 ipTM=0.409 tol=6.3
2024-12-07 20:01:56,615 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=34.7 pTM=0.334 ipTM=0.379 tol=6.66
2024-12-07 20:04:44,006 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=35.1 pTM=0.341 ipTM=0.562 tol=7.01
2024-12-07 20:07:31,290 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=35 pTM=0.339 ipTM=0.471 tol=6.6
2024-12-07 20:10:18,869 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=34.9 pTM=0.336 ipTM=0.412 tol=7.21
2024-12-07 20:13:06,275 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=34.7 pTM=0.336 ipTM=0.385 tol=6.86
2024-12-07 20:15:53,627 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=35.1 pTM=0.342 ipTM=0.641 tol=7.48
2024-12-07 20:18:41,261 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=35.1 pTM=0.339 ipTM=0.519 tol=5.95
2024-12-07 20:21:28,662 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=35.2 pTM=0.34 ipTM=0.594 tol=4.18
2024-12-07 20:24:15,945 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=35.1 pTM=0.34 ipTM=0.549 tol=5.09
2024-12-07 20:24:15,948 alphafold2_multimer_v3_model_2_seed_000 took 5187.5s (30 recycles)
2024-12-07 20:27:07,492 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=33.5 pTM=0.325 ipTM=0.367
2024-12-07 20:29:55,695 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=33.2 pTM=0.336 ipTM=0.611 tol=26.5
2024-12-07 20:32:44,051 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=32.8 pTM=0.327 ipTM=0.438 tol=17.5
2024-12-07 20:35:32,466 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=33.2 pTM=0.337 ipTM=0.544 tol=16.5
2024-12-07 20:38:20,887 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=33.3 pTM=0.329 ipTM=0.431 tol=13.1
2024-12-07 20:41:09,388 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=33.4 pTM=0.331 ipTM=0.435 tol=10.8
2024-12-07 20:43:57,940 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=33.3 pTM=0.325 ipTM=0.341 tol=9.41
2024-12-07 20:46:46,445 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=33.4 pTM=0.327 ipTM=0.347 tol=8.8
2024-12-07 20:49:34,986 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=33.4 pTM=0.327 ipTM=0.354 tol=7.77
2024-12-07 20:52:23,471 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=33.3 pTM=0.326 ipTM=0.344 tol=6.48
2024-12-07 20:55:12,004 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=33.3 pTM=0.326 ipTM=0.36 tol=6.68
2024-12-07 20:58:00,577 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=33.4 pTM=0.327 ipTM=0.348 tol=7.7
2024-12-07 21:00:49,049 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=33.2 pTM=0.326 ipTM=0.347 tol=7.16
2024-12-07 21:03:37,503 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=33.2 pTM=0.326 ipTM=0.353 tol=6.21
2024-12-07 21:06:26,018 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=33.3 pTM=0.325 ipTM=0.364 tol=7.12
2024-12-07 21:09:14,489 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=33.3 pTM=0.326 ipTM=0.362 tol=7.46
2024-12-07 21:12:02,966 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=33.3 pTM=0.326 ipTM=0.357 tol=7.6
2024-12-07 21:14:51,406 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=33.2 pTM=0.327 ipTM=0.357 tol=7.46
2024-12-07 21:17:39,808 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=33.4 pTM=0.326 ipTM=0.356 tol=8.16
2024-12-07 21:20:28,063 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=33.3 pTM=0.327 ipTM=0.355 tol=7.93
2024-12-07 21:23:16,401 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=33.3 pTM=0.327 ipTM=0.365 tol=9.22
2024-12-07 21:26:04,710 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=33.3 pTM=0.328 ipTM=0.348 tol=6.69
2024-12-07 21:28:53,156 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=33.3 pTM=0.327 ipTM=0.363 tol=8.51
2024-12-07 21:31:41,644 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=33.2 pTM=0.327 ipTM=0.353 tol=6.79
2024-12-07 21:34:30,088 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=33.3 pTM=0.326 ipTM=0.361 tol=7.14
2024-12-07 21:37:18,599 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=33.2 pTM=0.326 ipTM=0.345 tol=8.62
2024-12-07 21:40:07,172 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=33.2 pTM=0.326 ipTM=0.375 tol=10.4
2024-12-07 21:42:55,681 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=33.2 pTM=0.326 ipTM=0.343 tol=6.77
2024-12-07 21:45:44,215 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=33.3 pTM=0.327 ipTM=0.353 tol=6.47
2024-12-07 21:48:33,066 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=33.2 pTM=0.326 ipTM=0.342 tol=5.29
2024-12-07 21:51:21,927 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=33.3 pTM=0.326 ipTM=0.356 tol=6.43
2024-12-07 21:51:21,930 alphafold2_multimer_v3_model_3_seed_000 took 5222.1s (30 recycles)
2024-12-07 21:54:13,285 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=32 pTM=0.33 ipTM=0.468
2024-12-07 21:57:02,051 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=31.9 pTM=0.328 ipTM=0.553 tol=23.3
2024-12-07 21:59:50,840 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=31.7 pTM=0.326 ipTM=0.527 tol=19.8
2024-12-07 22:02:39,739 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=31.6 pTM=0.327 ipTM=0.499 tol=18.5
2024-12-07 22:05:28,845 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=31.6 pTM=0.328 ipTM=0.48 tol=15.2
2024-12-07 22:08:17,928 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=31.5 pTM=0.327 ipTM=0.497 tol=15.7
2024-12-07 22:11:07,190 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=31.6 pTM=0.327 ipTM=0.483 tol=16.7
2024-12-07 22:13:56,394 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=31.6 pTM=0.327 ipTM=0.486 tol=18.5
2024-12-07 22:16:45,716 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=31.7 pTM=0.325 ipTM=0.475 tol=17.8
2024-12-07 22:19:34,974 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=31.4 pTM=0.325 ipTM=0.473 tol=18.1
2024-12-07 22:22:24,081 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=31.6 pTM=0.326 ipTM=0.476 tol=14.5
2024-12-07 22:25:13,186 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=31.7 pTM=0.328 ipTM=0.499 tol=12.5
2024-12-07 22:28:02,273 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=31.5 pTM=0.329 ipTM=0.474 tol=13.1
2024-12-07 22:30:51,253 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=31.6 pTM=0.329 ipTM=0.474 tol=11.9
2024-12-07 22:33:40,383 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=31.6 pTM=0.329 ipTM=0.457 tol=14.4
2024-12-07 22:36:29,380 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=31.7 pTM=0.33 ipTM=0.497 tol=16.4
2024-12-07 22:39:18,608 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=31.7 pTM=0.329 ipTM=0.49 tol=16.1
2024-12-07 22:42:07,789 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=31.7 pTM=0.33 ipTM=0.491 tol=14.4
2024-12-07 22:44:56,926 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=31.8 pTM=0.327 ipTM=0.447 tol=15
2024-12-07 22:47:46,015 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=31.8 pTM=0.328 ipTM=0.491 tol=17.3
2024-12-07 22:50:35,172 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=31.8 pTM=0.329 ipTM=0.463 tol=17.4
2024-12-07 22:53:24,279 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=31.8 pTM=0.33 ipTM=0.495 tol=14
2024-12-07 22:56:13,395 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=31.9 pTM=0.332 ipTM=0.453 tol=11.8
2024-12-07 22:59:02,505 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=31.8 pTM=0.329 ipTM=0.493 tol=15.9
2024-12-07 23:01:51,622 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=31.8 pTM=0.329 ipTM=0.468 tol=13.7
2024-12-07 23:04:40,860 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=31.7 pTM=0.328 ipTM=0.476 tol=11.2
2024-12-07 23:07:30,099 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=31.6 pTM=0.328 ipTM=0.473 tol=12.6
2024-12-07 23:10:19,264 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=31.8 pTM=0.329 ipTM=0.507 tol=14.7
2024-12-07 23:13:08,351 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=31.8 pTM=0.332 ipTM=0.469 tol=15
2024-12-07 23:15:57,451 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=31.9 pTM=0.33 ipTM=0.484 tol=15.9
2024-12-07 23:18:46,686 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=31.8 pTM=0.333 ipTM=0.475 tol=15.2
2024-12-07 23:18:46,689 alphafold2_multimer_v3_model_4_seed_000 took 5240.9s (30 recycles)
2024-12-07 23:21:39,121 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=32.9 pTM=0.325 ipTM=0.527
2024-12-07 23:24:27,989 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=32.6 pTM=0.326 ipTM=0.42 tol=27.7
2024-12-07 23:27:16,844 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=33.3 pTM=0.328 ipTM=0.504 tol=22.1
2024-12-07 23:30:05,677 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=33.4 pTM=0.325 ipTM=0.416 tol=22.3
2024-12-07 23:32:54,612 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=33.4 pTM=0.324 ipTM=0.405 tol=17.9
2024-12-07 23:35:43,572 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=33.5 pTM=0.323 ipTM=0.428 tol=11.8
2024-12-07 23:38:32,685 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=33.6 pTM=0.324 ipTM=0.427 tol=11
2024-12-07 23:41:21,913 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=33.5 pTM=0.323 ipTM=0.438 tol=9.71
2024-12-07 23:44:11,071 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=33.6 pTM=0.325 ipTM=0.452 tol=12
2024-12-07 23:47:00,302 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=33.6 pTM=0.322 ipTM=0.421 tol=13.9
2024-12-07 23:49:49,577 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=33.7 pTM=0.325 ipTM=0.446 tol=20.6
2024-12-07 23:52:38,806 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=33.4 pTM=0.322 ipTM=0.43 tol=18.1
2024-12-07 23:55:28,114 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=33.6 pTM=0.326 ipTM=0.457 tol=13
2024-12-07 23:58:17,452 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=33.7 pTM=0.322 ipTM=0.419 tol=21.2
2024-12-08 00:01:06,733 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=33.7 pTM=0.324 ipTM=0.443 tol=13.6
2024-12-08 00:03:55,971 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=33.5 pTM=0.323 ipTM=0.404 tol=12
2024-12-08 00:06:45,076 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=33.5 pTM=0.327 ipTM=0.458 tol=11.3
2024-12-08 00:09:34,250 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=33.6 pTM=0.332 ipTM=0.511 tol=20.7
2024-12-08 00:12:23,510 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=34.2 pTM=0.337 ipTM=0.538 tol=18.7
2024-12-08 00:15:12,670 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=34.1 pTM=0.335 ipTM=0.522 tol=11.1
2024-12-08 00:18:01,819 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=34.2 pTM=0.342 ipTM=0.567 tol=17.2
2024-12-08 00:20:50,952 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=34.3 pTM=0.337 ipTM=0.558 tol=18.9
2024-12-08 00:23:39,975 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=34.7 pTM=0.344 ipTM=0.578 tol=12.8
2024-12-08 00:26:29,216 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=34.4 pTM=0.339 ipTM=0.56 tol=21.5
2024-12-08 00:29:18,502 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=34.7 pTM=0.344 ipTM=0.579 tol=18.7
2024-12-08 00:32:07,590 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=34.6 pTM=0.341 ipTM=0.583 tol=11.5
2024-12-08 00:34:56,700 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=34.6 pTM=0.344 ipTM=0.582 tol=11.9
2024-12-08 00:37:45,807 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=34.4 pTM=0.34 ipTM=0.552 tol=21.6
2024-12-08 00:40:34,923 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=34.6 pTM=0.345 ipTM=0.588 tol=19.7
2024-12-08 00:43:24,127 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=34.5 pTM=0.341 ipTM=0.571 tol=18.3
2024-12-08 00:46:13,329 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=34.7 pTM=0.345 ipTM=0.606 tol=12
2024-12-08 00:46:13,332 alphafold2_multimer_v3_model_5_seed_000 took 5242.8s (30 recycles)
2024-12-08 00:46:17,139 reranking models by 'multimer' metric
2024-12-08 00:46:21,055 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-08 00:58:05,635 Relaxation took 708.5s
2024-12-08 00:58:05,635 rank_001_alphafold2_multimer_v3_model_5_seed_000 pLDDT=34.7 pTM=0.345 ipTM=0.606
2024-12-08 01:08:59,834 Relaxation took 654.2s
2024-12-08 01:08:59,834 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=35.1 pTM=0.34 ipTM=0.549
2024-12-08 01:18:40,201 Relaxation took 580.4s
2024-12-08 01:18:40,201 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=34.3 pTM=0.35 ipTM=0.49
2024-12-08 01:31:52,185 Relaxation took 792.0s
2024-12-08 01:31:52,186 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=31.8 pTM=0.333 ipTM=0.475
2024-12-08 01:42:55,453 Relaxation took 663.3s
2024-12-08 01:42:55,453 rank_005_alphafold2_multimer_v3_model_3_seed_000 pLDDT=33.3 pTM=0.326 ipTM=0.356
2024-12-08 01:43:03,060 Done