2024-12-07 17:33:05,652 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-07 17:33:05,941 Running on GPU
2024-12-07 17:33:08,468 Found 6 citations for tools or databases
2024-12-07 17:33:08,468 Query 1/1: RBBP6_PNN (length 2509)
2024-12-07 17:33:08,754 Sleeping for 9s. Reason: PENDING
2024-12-07 17:33:18,014 Sleeping for 10s. Reason: RUNNING
2024-12-07 17:33:28,274 Sleeping for 7s. Reason: RUNNING
2024-12-07 17:33:35,542 Sleeping for 5s. Reason: RUNNING
2024-12-07 17:33:40,796 Sleeping for 10s. Reason: RUNNING
2024-12-07 17:33:51,057 Sleeping for 9s. Reason: RUNNING
2024-12-07 17:34:00,317 Sleeping for 8s. Reason: RUNNING
2024-12-07 17:34:08,571 Sleeping for 5s. Reason: RUNNING
2024-12-07 17:34:13,821 Sleeping for 10s. Reason: RUNNING
2024-12-07 17:34:24,087 Sleeping for 7s. Reason: RUNNING
2024-12-07 17:34:32,921 Sleeping for 7s. Reason: PENDING
2024-12-07 17:34:40,181 Sleeping for 6s. Reason: RUNNING
2024-12-07 17:34:46,438 Sleeping for 6s. Reason: RUNNING
2024-12-07 17:34:52,694 Sleeping for 7s. Reason: RUNNING
2024-12-07 17:34:59,963 Sleeping for 5s. Reason: RUNNING
2024-12-07 17:35:05,210 Sleeping for 10s. Reason: RUNNING
2024-12-07 17:35:15,468 Sleeping for 9s. Reason: RUNNING
2024-12-07 17:35:24,720 Sleeping for 5s. Reason: RUNNING
2024-12-07 17:35:29,986 Sleeping for 9s. Reason: RUNNING
2024-12-07 17:35:39,255 Sleeping for 6s. Reason: RUNNING
2024-12-07 17:35:45,519 Sleeping for 6s. Reason: RUNNING
2024-12-07 17:35:51,772 Sleeping for 6s. Reason: RUNNING
2024-12-07 17:35:58,029 Sleeping for 5s. Reason: RUNNING
2024-12-07 17:36:03,288 Sleeping for 7s. Reason: RUNNING
2024-12-07 17:36:16,206 Setting max_seq=508, max_extra_seq=2048
2024-12-07 17:44:34,864 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=26.4 pTM=0.26 ipTM=0.26
2024-12-07 17:49:41,045 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=26.3 pTM=0.258 ipTM=0.229 tol=25.1
2024-12-07 17:54:47,299 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=26.4 pTM=0.256 ipTM=0.226 tol=16.2
2024-12-07 17:59:53,599 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=26.2 pTM=0.255 ipTM=0.224 tol=13.8
2024-12-07 18:04:59,898 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=26.2 pTM=0.254 ipTM=0.224 tol=14.1
2024-12-07 18:10:06,161 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=26.1 pTM=0.254 ipTM=0.225 tol=15
2024-12-07 18:15:12,551 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=26.1 pTM=0.254 ipTM=0.226 tol=13.4
2024-12-07 18:20:18,921 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=26 pTM=0.254 ipTM=0.228 tol=13.7
2024-12-07 18:25:25,372 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=26.1 pTM=0.255 ipTM=0.227 tol=24
2024-12-07 18:30:31,772 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=26.1 pTM=0.252 ipTM=0.228 tol=25.6
2024-12-07 18:35:38,128 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=26.1 pTM=0.254 ipTM=0.228 tol=22.9
2024-12-07 18:40:44,645 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=26.2 pTM=0.253 ipTM=0.227 tol=20
2024-12-07 18:45:51,129 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=26.3 pTM=0.254 ipTM=0.226 tol=16.2
2024-12-07 18:50:57,497 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=26.2 pTM=0.253 ipTM=0.227 tol=13.2
2024-12-07 18:56:03,992 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=26.2 pTM=0.252 ipTM=0.226 tol=21.3
2024-12-07 19:01:10,497 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=26.3 pTM=0.252 ipTM=0.224 tol=16.4
2024-12-07 19:06:17,080 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=26.1 pTM=0.252 ipTM=0.225 tol=19.6
2024-12-07 19:11:23,646 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=26.1 pTM=0.251 ipTM=0.224 tol=15
2024-12-07 19:16:30,281 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=26.1 pTM=0.252 ipTM=0.224 tol=14.7
2024-12-07 19:21:36,752 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=26.1 pTM=0.253 ipTM=0.224 tol=14
2024-12-07 19:26:43,310 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=26 pTM=0.253 ipTM=0.223 tol=15.6
2024-12-07 19:31:49,847 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=26.2 pTM=0.254 ipTM=0.224 tol=11.8
2024-12-07 19:36:56,397 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=26.1 pTM=0.253 ipTM=0.225 tol=13.4
2024-12-07 19:42:02,968 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=26.2 pTM=0.254 ipTM=0.226 tol=13.3
2024-12-07 19:47:09,624 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=26.2 pTM=0.254 ipTM=0.225 tol=11.5
2024-12-07 19:52:16,159 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=26.2 pTM=0.255 ipTM=0.227 tol=11.8
2024-12-07 19:57:22,667 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=26.2 pTM=0.256 ipTM=0.229 tol=10.8
2024-12-07 20:02:29,194 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=26.2 pTM=0.256 ipTM=0.228 tol=12.6
2024-12-07 20:07:35,639 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=26.2 pTM=0.256 ipTM=0.229 tol=10.4
2024-12-07 20:12:42,175 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=26.1 pTM=0.256 ipTM=0.23 tol=11.5
2024-12-07 20:17:48,656 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=26.2 pTM=0.255 ipTM=0.23 tol=12
2024-12-07 20:17:48,659 alphafold2_multimer_v3_model_1_seed_000 took 9687.4s (30 recycles)
2024-12-07 20:22:58,612 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=26.9 pTM=0.269 ipTM=0.218
2024-12-07 20:28:05,312 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=27.5 pTM=0.268 ipTM=0.219 tol=26.1
2024-12-07 20:33:11,957 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=27.5 pTM=0.27 ipTM=0.221 tol=16.2
2024-12-07 20:38:18,595 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=27.6 pTM=0.271 ipTM=0.221 tol=18.3
2024-12-07 20:43:25,327 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=27.7 pTM=0.271 ipTM=0.222 tol=20.1
2024-12-07 20:48:32,025 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=27.7 pTM=0.273 ipTM=0.223 tol=14.7
2024-12-07 20:53:38,708 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=27.6 pTM=0.271 ipTM=0.222 tol=18.9
2024-12-07 20:58:45,344 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=27.8 pTM=0.273 ipTM=0.224 tol=15.6
2024-12-07 21:03:51,937 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=27.8 pTM=0.273 ipTM=0.225 tol=15.5
2024-12-07 21:08:58,519 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=27.9 pTM=0.273 ipTM=0.225 tol=17.9
2024-12-07 21:14:05,096 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=27.9 pTM=0.274 ipTM=0.224 tol=15.7
2024-12-07 21:19:11,698 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=27.9 pTM=0.274 ipTM=0.225 tol=12.9
2024-12-07 21:24:18,328 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=28 pTM=0.274 ipTM=0.225 tol=9.42
2024-12-07 21:29:25,004 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=27.9 pTM=0.273 ipTM=0.224 tol=9.84
2024-12-07 21:34:31,498 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=27.8 pTM=0.272 ipTM=0.225 tol=19.4
2024-12-07 21:39:37,973 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=28 pTM=0.273 ipTM=0.225 tol=16.8
2024-12-07 21:44:44,564 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=27.9 pTM=0.275 ipTM=0.226 tol=15.4
2024-12-07 21:49:51,154 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=27.8 pTM=0.275 ipTM=0.228 tol=12.3
2024-12-07 21:54:57,799 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=27.9 pTM=0.276 ipTM=0.228 tol=11.1
2024-12-07 22:00:04,513 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=27.8 pTM=0.277 ipTM=0.229 tol=20.3
2024-12-07 22:05:11,142 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=27.9 pTM=0.276 ipTM=0.229 tol=18.7
2024-12-07 22:10:17,804 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=27.9 pTM=0.276 ipTM=0.228 tol=10.3
2024-12-07 22:15:24,384 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=27.9 pTM=0.277 ipTM=0.229 tol=19.5
2024-12-07 22:20:31,045 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=27.9 pTM=0.278 ipTM=0.229 tol=17.4
2024-12-07 22:25:37,615 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=27.9 pTM=0.277 ipTM=0.229 tol=12.4
2024-12-07 22:30:44,071 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=27.9 pTM=0.277 ipTM=0.228 tol=11.5
2024-12-07 22:35:50,657 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=27.9 pTM=0.277 ipTM=0.227 tol=10.1
2024-12-07 22:40:57,260 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=27.9 pTM=0.277 ipTM=0.229 tol=9.83
2024-12-07 22:46:03,966 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=27.9 pTM=0.279 ipTM=0.23 tol=16.1
2024-12-07 22:51:10,585 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=27.8 pTM=0.276 ipTM=0.227 tol=12.5
2024-12-07 22:56:17,242 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=27.9 pTM=0.275 ipTM=0.226 tol=9.91
2024-12-07 22:56:17,245 alphafold2_multimer_v3_model_2_seed_000 took 9504.9s (30 recycles)
2024-12-07 23:01:28,404 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=27.6 pTM=0.264 ipTM=0.311
2024-12-07 23:06:37,148 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=27.5 pTM=0.253 ipTM=0.225 tol=28.6
2024-12-07 23:11:45,826 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=27.3 pTM=0.254 ipTM=0.231 tol=37.1
2024-12-07 23:16:54,813 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=27.3 pTM=0.251 ipTM=0.228 tol=32.3
2024-12-07 23:22:03,794 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=27.2 pTM=0.251 ipTM=0.233 tol=26.4
2024-12-07 23:27:12,764 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=27.2 pTM=0.251 ipTM=0.227 tol=26.9
2024-12-07 23:32:21,812 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=27.2 pTM=0.252 ipTM=0.238 tol=22.9
2024-12-07 23:37:30,812 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=27.2 pTM=0.252 ipTM=0.229 tol=18.2
2024-12-07 23:42:39,682 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=27.5 pTM=0.252 ipTM=0.232 tol=16.1
2024-12-07 23:47:48,641 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=27.6 pTM=0.256 ipTM=0.24 tol=19.7
2024-12-07 23:52:57,640 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=27.7 pTM=0.255 ipTM=0.242 tol=17.1
2024-12-07 23:58:06,618 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=27.7 pTM=0.255 ipTM=0.235 tol=16.3
2024-12-08 00:03:15,725 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=27.8 pTM=0.254 ipTM=0.239 tol=17.9
2024-12-08 00:08:24,747 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=27.8 pTM=0.256 ipTM=0.24 tol=13.6
2024-12-08 00:13:33,767 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=28.1 pTM=0.256 ipTM=0.248 tol=13.8
2024-12-08 00:18:42,851 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=27.9 pTM=0.257 ipTM=0.237 tol=26.5
2024-12-08 00:23:51,830 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=27.8 pTM=0.255 ipTM=0.249 tol=24.8
2024-12-08 00:29:00,694 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=27.9 pTM=0.253 ipTM=0.24 tol=16.6
2024-12-08 00:34:09,659 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=28 pTM=0.256 ipTM=0.256 tol=16.1
2024-12-08 00:39:18,689 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=27.9 pTM=0.254 ipTM=0.237 tol=17.2
2024-12-08 00:44:27,593 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=27.9 pTM=0.254 ipTM=0.248 tol=14.6
2024-12-08 00:49:36,650 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=28 pTM=0.253 ipTM=0.236 tol=14.3
2024-12-08 00:54:45,694 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=28.1 pTM=0.254 ipTM=0.246 tol=13.9
2024-12-08 00:59:54,815 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=27.9 pTM=0.253 ipTM=0.23 tol=13.1
2024-12-08 01:05:03,863 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=27.9 pTM=0.254 ipTM=0.242 tol=16.1
2024-12-08 01:10:12,815 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=27.8 pTM=0.253 ipTM=0.229 tol=14.5
2024-12-08 01:15:21,855 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=28 pTM=0.255 ipTM=0.246 tol=27.6
2024-12-08 01:20:30,993 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=27.4 pTM=0.253 ipTM=0.231 tol=26.8
2024-12-08 01:25:40,053 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=27.9 pTM=0.255 ipTM=0.237 tol=26.4
2024-12-08 01:30:48,936 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=27.5 pTM=0.253 ipTM=0.233 tol=25.7
2024-12-08 01:35:57,860 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=27.8 pTM=0.251 ipTM=0.244 tol=16.4
2024-12-08 01:35:57,863 alphafold2_multimer_v3_model_3_seed_000 took 9577.0s (30 recycles)
2024-12-08 01:41:09,676 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=25.8 pTM=0.247 ipTM=0.232
2024-12-08 01:46:19,033 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=26 pTM=0.251 ipTM=0.239 tol=32.9
2024-12-08 01:51:28,611 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=26 pTM=0.253 ipTM=0.239 tol=29.3
2024-12-08 01:56:38,336 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=26.2 pTM=0.251 ipTM=0.239 tol=23.1
2024-12-08 02:01:48,141 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=26.2 pTM=0.253 ipTM=0.246 tol=25.3
2024-12-08 02:06:57,672 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=26.4 pTM=0.259 ipTM=0.237 tol=22.5
2024-12-08 02:12:07,267 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=26.5 pTM=0.262 ipTM=0.246 tol=18.5
2024-12-08 02:17:16,844 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=26.6 pTM=0.262 ipTM=0.243 tol=16.5
2024-12-08 02:22:26,415 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=26.7 pTM=0.264 ipTM=0.247 tol=24.8
2024-12-08 02:27:36,092 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=26.8 pTM=0.26 ipTM=0.238 tol=22.9
2024-12-08 02:32:45,691 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=26.6 pTM=0.263 ipTM=0.243 tol=22.8
2024-12-08 02:37:55,243 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=26.8 pTM=0.264 ipTM=0.246 tol=21.9
2024-12-08 02:43:04,901 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=26.8 pTM=0.263 ipTM=0.265 tol=16
2024-12-08 02:48:14,435 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=26.6 pTM=0.26 ipTM=0.245 tol=14.8
2024-12-08 02:53:24,030 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=26.8 pTM=0.263 ipTM=0.245 tol=21.6
2024-12-08 02:58:33,661 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=26.7 pTM=0.263 ipTM=0.24 tol=16
2024-12-08 03:03:43,395 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=26.7 pTM=0.262 ipTM=0.241 tol=22.2
2024-12-08 03:08:53,042 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=26.5 pTM=0.261 ipTM=0.242 tol=21.8
2024-12-08 03:14:02,729 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=26.8 pTM=0.262 ipTM=0.246 tol=20
2024-12-08 03:19:12,193 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=26.7 pTM=0.264 ipTM=0.255 tol=20.6
2024-12-08 03:24:21,767 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=26.7 pTM=0.262 ipTM=0.242 tol=19.9
2024-12-08 03:29:31,209 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=26.6 pTM=0.263 ipTM=0.248 tol=20.7
2024-12-08 03:34:40,681 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=26.7 pTM=0.263 ipTM=0.239 tol=17.1
2024-12-08 03:39:50,236 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=26.8 pTM=0.263 ipTM=0.249 tol=18.7
2024-12-08 03:44:59,837 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=26.8 pTM=0.262 ipTM=0.244 tol=18.3
2024-12-08 03:50:09,300 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=26.9 pTM=0.264 ipTM=0.263 tol=15.6
2024-12-08 03:55:18,785 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=26.7 pTM=0.261 ipTM=0.241 tol=13.1
2024-12-08 04:00:28,175 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=27 pTM=0.263 ipTM=0.257 tol=14.8
2024-12-08 04:05:37,659 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=26.7 pTM=0.261 ipTM=0.241 tol=18.7
2024-12-08 04:10:47,156 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=26.7 pTM=0.264 ipTM=0.278 tol=17.6
2024-12-08 04:15:56,539 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=26.7 pTM=0.26 ipTM=0.246 tol=15.6
2024-12-08 04:15:56,543 alphafold2_multimer_v3_model_4_seed_000 took 9595.1s (30 recycles)
2024-12-08 04:21:09,073 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=27 pTM=0.252 ipTM=0.221
2024-12-08 04:26:18,753 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=27.1 pTM=0.251 ipTM=0.22 tol=27.4
2024-12-08 04:31:28,547 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=26.9 pTM=0.251 ipTM=0.226 tol=28.1
2024-12-08 04:36:38,278 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=26.9 pTM=0.251 ipTM=0.226 tol=19.6
2024-12-08 04:41:48,175 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=27.1 pTM=0.249 ipTM=0.221 tol=15.4
2024-12-08 04:46:57,999 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=27.2 pTM=0.25 ipTM=0.219 tol=23
2024-12-08 04:52:07,841 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=27.1 pTM=0.249 ipTM=0.222 tol=22.4
2024-12-08 04:57:17,654 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=27.2 pTM=0.249 ipTM=0.22 tol=17.7
2024-12-08 05:02:27,430 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=27.2 pTM=0.248 ipTM=0.205 tol=29.3
2024-12-08 05:07:37,259 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=27.2 pTM=0.247 ipTM=0.203 tol=27.8
2024-12-08 05:12:47,145 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=27.2 pTM=0.247 ipTM=0.203 tol=17.6
2024-12-08 05:17:56,971 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=27.3 pTM=0.248 ipTM=0.204 tol=14
2024-12-08 05:23:06,933 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=27.5 pTM=0.249 ipTM=0.203 tol=27.4
2024-12-08 05:28:16,930 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=27.4 pTM=0.247 ipTM=0.202 tol=24.2
2024-12-08 05:33:26,790 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=27.3 pTM=0.247 ipTM=0.203 tol=23.8
2024-12-08 05:38:36,718 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=27.2 pTM=0.247 ipTM=0.202 tol=29.2
2024-12-08 05:43:46,603 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=27.1 pTM=0.249 ipTM=0.202 tol=25.8
2024-12-08 05:48:56,495 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=27.1 pTM=0.248 ipTM=0.202 tol=18.6
2024-12-08 05:54:06,497 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=27.3 pTM=0.249 ipTM=0.202 tol=26.2
2024-12-08 05:59:16,359 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=27.3 pTM=0.248 ipTM=0.203 tol=25.2
2024-12-08 06:04:26,404 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=27.3 pTM=0.248 ipTM=0.203 tol=25.8
2024-12-08 06:09:36,292 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=27.3 pTM=0.247 ipTM=0.202 tol=23.5
2024-12-08 06:14:46,271 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=27.5 pTM=0.248 ipTM=0.201 tol=23
2024-12-08 06:19:56,258 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=27.5 pTM=0.248 ipTM=0.202 tol=19.9
2024-12-08 06:25:06,216 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=27.3 pTM=0.248 ipTM=0.202 tol=17.6
2024-12-08 06:30:16,052 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=27.2 pTM=0.249 ipTM=0.203 tol=24
2024-12-08 06:35:25,986 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=27.3 pTM=0.248 ipTM=0.202 tol=22
2024-12-08 06:40:35,942 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=27.4 pTM=0.249 ipTM=0.202 tol=24.7
2024-12-08 06:45:45,977 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=27.3 pTM=0.248 ipTM=0.202 tol=16.6
2024-12-08 06:50:55,953 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=27.2 pTM=0.248 ipTM=0.202 tol=24.7
2024-12-08 06:56:05,936 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=27.4 pTM=0.248 ipTM=0.202 tol=14.5
2024-12-08 06:56:05,939 alphafold2_multimer_v3_model_5_seed_000 took 9605.8s (30 recycles)
2024-12-08 06:56:09,542 reranking models by 'multimer' metric
2024-12-08 06:56:12,823 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-08 07:08:44,586 Relaxation took 755.0s
2024-12-08 07:08:44,586 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=26.7 pTM=0.26 ipTM=0.246
2024-12-08 07:19:00,399 Relaxation took 615.8s
2024-12-08 07:19:00,399 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=27.8 pTM=0.251 ipTM=0.244
2024-12-08 07:34:56,747 Relaxation took 956.3s
2024-12-08 07:34:56,747 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=27.9 pTM=0.275 ipTM=0.226
2024-12-08 07:47:00,607 Relaxation took 723.9s
2024-12-08 07:47:00,607 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=26.2 pTM=0.255 ipTM=0.23
2024-12-08 08:05:14,413 Relaxation took 1093.8s
2024-12-08 08:05:14,413 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=27.4 pTM=0.248 ipTM=0.202
2024-12-08 08:05:22,174 Done