2024-12-07 17:45:15,391 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-07 17:45:16,957 Running on GPU
2024-12-07 17:45:20,532 Found 6 citations for tools or databases
2024-12-07 17:45:20,532 Query 1/1: RBBP7_CHD4 (length 2337)
2024-12-07 17:45:20,825 Sleeping for 10s. Reason: PENDING
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2024-12-07 17:49:31,225 Sleeping for 7s. Reason: RUNNING
2024-12-07 17:49:38,483 Sleeping for 6s. Reason: RUNNING
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2024-12-07 17:52:11,187 Sleeping for 9s. Reason: RUNNING
2024-12-07 17:52:20,443 Sleeping for 9s. Reason: RUNNING
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2024-12-07 17:54:08,103 Sleeping for 10s. Reason: RUNNING
2024-12-07 17:54:21,821 Sleeping for 7s. Reason: PENDING
2024-12-07 17:54:29,077 Sleeping for 9s. Reason: RUNNING
2024-12-07 17:54:38,341 Sleeping for 5s. Reason: RUNNING
2024-12-07 17:54:43,594 Sleeping for 5s. Reason: RUNNING
2024-12-07 17:54:48,862 Sleeping for 7s. Reason: RUNNING
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2024-12-07 17:55:03,530 Sleeping for 5s. Reason: RUNNING
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2024-12-07 17:58:51,251 Sleeping for 5s. Reason: RUNNING
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2024-12-07 17:59:03,766 Sleeping for 8s. Reason: RUNNING
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2024-12-07 17:59:41,057 Sleeping for 7s. Reason: RUNNING
2024-12-07 17:59:48,326 Sleeping for 7s. Reason: RUNNING
2024-12-07 17:59:55,584 Sleeping for 8s. Reason: RUNNING
2024-12-07 18:00:03,848 Sleeping for 8s. Reason: RUNNING
2024-12-07 18:00:12,107 Sleeping for 5s. Reason: RUNNING
2024-12-07 18:00:17,363 Sleeping for 10s. Reason: RUNNING
2024-12-07 18:00:27,631 Sleeping for 9s. Reason: RUNNING
2024-12-07 18:00:36,904 Sleeping for 10s. Reason: RUNNING
2024-12-07 18:00:47,170 Sleeping for 10s. Reason: RUNNING
2024-12-07 18:00:57,433 Sleeping for 9s. Reason: RUNNING
2024-12-07 18:01:06,688 Sleeping for 9s. Reason: RUNNING
2024-12-07 18:01:15,950 Sleeping for 5s. Reason: RUNNING
2024-12-07 18:01:39,762 Setting max_seq=508, max_extra_seq=2048
2024-12-07 18:09:33,455 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=59.2 pTM=0.432 ipTM=0.392
2024-12-07 18:12:37,035 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=59.9 pTM=0.43 ipTM=0.523 tol=13.7
2024-12-07 18:15:40,592 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=59.8 pTM=0.43 ipTM=0.321 tol=7.37
2024-12-07 18:18:43,641 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=59.8 pTM=0.43 ipTM=0.331 tol=6
2024-12-07 18:21:46,446 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=60.2 pTM=0.432 ipTM=0.397 tol=5.4
2024-12-07 18:24:49,119 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=60.4 pTM=0.434 ipTM=0.502 tol=5.66
2024-12-07 18:27:51,952 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=60.1 pTM=0.431 ipTM=0.573 tol=4.3
2024-12-07 18:30:54,920 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=60.5 pTM=0.434 ipTM=0.554 tol=3.3
2024-12-07 18:33:58,019 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=60.3 pTM=0.432 ipTM=0.477 tol=4.83
2024-12-07 18:37:01,034 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=60.6 pTM=0.431 ipTM=0.542 tol=5.27
2024-12-07 18:40:03,877 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=60.4 pTM=0.43 ipTM=0.5 tol=4.75
2024-12-07 18:43:06,779 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=60.2 pTM=0.43 ipTM=0.449 tol=4.32
2024-12-07 18:46:09,786 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=60.2 pTM=0.43 ipTM=0.521 tol=4.46
2024-12-07 18:49:12,776 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=60.1 pTM=0.429 ipTM=0.519 tol=5.21
2024-12-07 18:52:15,622 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=60.2 pTM=0.432 ipTM=0.557 tol=6.25
2024-12-07 18:55:18,481 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=60.2 pTM=0.43 ipTM=0.544 tol=9.74
2024-12-07 18:58:21,375 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=60 pTM=0.43 ipTM=0.512 tol=4.77
2024-12-07 19:01:24,379 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=59.9 pTM=0.426 ipTM=0.542 tol=4.59
2024-12-07 19:04:27,296 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=59.9 pTM=0.431 ipTM=0.549 tol=5.92
2024-12-07 19:07:30,092 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=59.9 pTM=0.43 ipTM=0.525 tol=3.74
2024-12-07 19:10:33,022 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=59.8 pTM=0.429 ipTM=0.488 tol=4.15
2024-12-07 19:13:35,997 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=60.1 pTM=0.429 ipTM=0.513 tol=3.49
2024-12-07 19:16:39,075 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=60.2 pTM=0.434 ipTM=0.55 tol=2.91
2024-12-07 19:19:42,081 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=60.2 pTM=0.433 ipTM=0.554 tol=3.64
2024-12-07 19:22:44,861 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=60.3 pTM=0.436 ipTM=0.577 tol=2.48
2024-12-07 19:25:47,551 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=60.3 pTM=0.435 ipTM=0.543 tol=1.94
2024-12-07 19:28:50,656 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=60 pTM=0.435 ipTM=0.54 tol=2.47
2024-12-07 19:31:53,588 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=60.1 pTM=0.434 ipTM=0.548 tol=2.69
2024-12-07 19:34:56,546 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=60.4 pTM=0.439 ipTM=0.558 tol=3.3
2024-12-07 19:37:59,476 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=60.1 pTM=0.43 ipTM=0.545 tol=5.22
2024-12-07 19:41:02,276 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=60.3 pTM=0.436 ipTM=0.569 tol=4.89
2024-12-07 19:41:02,279 alphafold2_multimer_v3_model_1_seed_000 took 5941.7s (30 recycles)
2024-12-07 19:44:10,065 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=58.2 pTM=0.443 ipTM=0.287
2024-12-07 19:47:13,548 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=60.8 pTM=0.453 ipTM=0.296 tol=11
2024-12-07 19:50:17,042 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=61.3 pTM=0.455 ipTM=0.306 tol=6.96
2024-12-07 19:53:20,553 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=61.3 pTM=0.452 ipTM=0.304 tol=4.46
2024-12-07 19:56:24,021 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=61.7 pTM=0.454 ipTM=0.298 tol=5.12
2024-12-07 19:59:27,505 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=61.8 pTM=0.457 ipTM=0.302 tol=6.08
2024-12-07 20:02:30,925 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=61.6 pTM=0.453 ipTM=0.298 tol=4.26
2024-12-07 20:05:34,331 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=61.6 pTM=0.453 ipTM=0.296 tol=3.62
2024-12-07 20:08:37,831 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=61.7 pTM=0.453 ipTM=0.293 tol=2.63
2024-12-07 20:11:41,462 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=61.6 pTM=0.451 ipTM=0.288 tol=2.54
2024-12-07 20:14:45,048 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=62 pTM=0.452 ipTM=0.291 tol=2.5
2024-12-07 20:17:48,599 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=61.9 pTM=0.45 ipTM=0.291 tol=2.81
2024-12-07 20:20:52,234 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=61.8 pTM=0.452 ipTM=0.292 tol=2.53
2024-12-07 20:23:55,788 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=62.1 pTM=0.454 ipTM=0.311 tol=2.41
2024-12-07 20:26:59,345 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=62 pTM=0.454 ipTM=0.299 tol=4.13
2024-12-07 20:30:02,973 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=62 pTM=0.453 ipTM=0.326 tol=4.12
2024-12-07 20:33:06,578 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=61.7 pTM=0.448 ipTM=0.307 tol=3.11
2024-12-07 20:36:10,157 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=61.8 pTM=0.449 ipTM=0.312 tol=5.37
2024-12-07 20:39:13,782 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=61.7 pTM=0.448 ipTM=0.312 tol=3.05
2024-12-07 20:42:17,309 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=62 pTM=0.451 ipTM=0.313 tol=2.59
2024-12-07 20:45:20,806 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=61.9 pTM=0.45 ipTM=0.31 tol=2.68
2024-12-07 20:48:24,342 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=62.2 pTM=0.451 ipTM=0.319 tol=4.43
2024-12-07 20:51:27,842 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=61.9 pTM=0.45 ipTM=0.318 tol=2.65
2024-12-07 20:54:31,343 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=62.1 pTM=0.453 ipTM=0.306 tol=2.03
2024-12-07 20:57:34,905 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=61.8 pTM=0.448 ipTM=0.318 tol=1.9
2024-12-07 21:00:38,343 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=62.1 pTM=0.45 ipTM=0.314 tol=1.66
2024-12-07 21:03:41,712 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=61.9 pTM=0.449 ipTM=0.355 tol=1.92
2024-12-07 21:06:45,125 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=62 pTM=0.447 ipTM=0.324 tol=1.84
2024-12-07 21:09:48,521 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=61.6 pTM=0.445 ipTM=0.32 tol=3.72
2024-12-07 21:12:51,873 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=61.9 pTM=0.449 ipTM=0.337 tol=3.06
2024-12-07 21:15:55,335 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=61.9 pTM=0.45 ipTM=0.316 tol=1.74
2024-12-07 21:15:55,338 alphafold2_multimer_v3_model_2_seed_000 took 5688.5s (30 recycles)
2024-12-07 21:19:04,031 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=58.8 pTM=0.431 ipTM=0.243
2024-12-07 21:22:07,990 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=59.4 pTM=0.433 ipTM=0.629 tol=19.8
2024-12-07 21:25:11,947 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=59.5 pTM=0.437 ipTM=0.34 tol=12.1
2024-12-07 21:28:15,873 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=60 pTM=0.439 ipTM=0.325 tol=7.79
2024-12-07 21:31:19,689 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=59.8 pTM=0.448 ipTM=0.322 tol=12.9
2024-12-07 21:34:23,472 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=60.9 pTM=0.459 ipTM=0.507 tol=10.9
2024-12-07 21:37:27,084 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=60.8 pTM=0.462 ipTM=0.356 tol=6.09
2024-12-07 21:40:30,668 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=60.9 pTM=0.462 ipTM=0.344 tol=4.18
2024-12-07 21:43:34,268 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=61 pTM=0.46 ipTM=0.423 tol=3.61
2024-12-07 21:46:37,764 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=61 pTM=0.46 ipTM=0.373 tol=2.6
2024-12-07 21:49:41,247 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=61.2 pTM=0.468 ipTM=0.379 tol=4
2024-12-07 21:52:44,736 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=61 pTM=0.463 ipTM=0.418 tol=2.27
2024-12-07 21:55:48,152 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=61.2 pTM=0.467 ipTM=0.534 tol=2.05
2024-12-07 21:58:51,547 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=61.5 pTM=0.469 ipTM=0.539 tol=1.99
2024-12-07 22:01:54,990 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=61.2 pTM=0.466 ipTM=0.433 tol=1.78
2024-12-07 22:04:58,341 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=61.1 pTM=0.465 ipTM=0.43 tol=1.79
2024-12-07 22:08:01,767 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=61.3 pTM=0.468 ipTM=0.592 tol=2.42
2024-12-07 22:11:05,316 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=61.2 pTM=0.468 ipTM=0.561 tol=2.69
2024-12-07 22:14:08,832 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=61.1 pTM=0.469 ipTM=0.414 tol=2.61
2024-12-07 22:17:12,277 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=61.1 pTM=0.466 ipTM=0.41 tol=1.62
2024-12-07 22:20:15,699 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=61.2 pTM=0.471 ipTM=0.613 tol=2.22
2024-12-07 22:23:19,197 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=61.4 pTM=0.468 ipTM=0.568 tol=2.06
2024-12-07 22:26:22,683 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=61.3 pTM=0.471 ipTM=0.437 tol=4.17
2024-12-07 22:29:26,146 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=61 pTM=0.471 ipTM=0.54 tol=3.7
2024-12-07 22:32:29,742 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=61.3 pTM=0.468 ipTM=0.594 tol=3.98
2024-12-07 22:35:33,290 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=61.2 pTM=0.465 ipTM=0.574 tol=5.21
2024-12-07 22:38:36,779 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=61.4 pTM=0.469 ipTM=0.521 tol=3.37
2024-12-07 22:41:40,367 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=61.2 pTM=0.466 ipTM=0.417 tol=4.15
2024-12-07 22:44:43,876 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=61.1 pTM=0.468 ipTM=0.394 tol=3.46
2024-12-07 22:47:47,343 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=61 pTM=0.461 ipTM=0.378 tol=3.23
2024-12-07 22:50:50,879 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=61.1 pTM=0.462 ipTM=0.365 tol=2.65
2024-12-07 22:50:50,882 alphafold2_multimer_v3_model_3_seed_000 took 5691.0s (30 recycles)
2024-12-07 22:53:59,322 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=56.6 pTM=0.434 ipTM=0.281
2024-12-07 22:57:03,385 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=58 pTM=0.427 ipTM=0.402 tol=14.1
2024-12-07 23:00:07,528 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=58.1 pTM=0.434 ipTM=0.293 tol=10.6
2024-12-07 23:03:11,730 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=58.1 pTM=0.431 ipTM=0.291 tol=8.33
2024-12-07 23:06:15,945 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=58.1 pTM=0.434 ipTM=0.306 tol=8
2024-12-07 23:09:20,017 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=58 pTM=0.437 ipTM=0.306 tol=5.19
2024-12-07 23:12:24,063 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=57.8 pTM=0.44 ipTM=0.319 tol=3.73
2024-12-07 23:15:28,006 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=58.1 pTM=0.444 ipTM=0.327 tol=3.4
2024-12-07 23:18:31,886 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=58.3 pTM=0.451 ipTM=0.352 tol=2.61
2024-12-07 23:21:35,820 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=58.5 pTM=0.449 ipTM=0.339 tol=4.17
2024-12-07 23:24:39,619 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=58.5 pTM=0.453 ipTM=0.354 tol=3.46
2024-12-07 23:27:43,441 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=58.1 pTM=0.447 ipTM=0.341 tol=4.43
2024-12-07 23:30:47,289 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=58.2 pTM=0.448 ipTM=0.331 tol=4.77
2024-12-07 23:33:51,120 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=58.5 pTM=0.451 ipTM=0.346 tol=5.84
2024-12-07 23:36:54,963 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=58.9 pTM=0.458 ipTM=0.363 tol=5.96
2024-12-07 23:39:58,750 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=58.6 pTM=0.45 ipTM=0.343 tol=1.96
2024-12-07 23:43:02,508 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=58.9 pTM=0.455 ipTM=0.348 tol=2.32
2024-12-07 23:46:06,381 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=58.8 pTM=0.451 ipTM=0.342 tol=5.45
2024-12-07 23:49:10,116 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=58.9 pTM=0.455 ipTM=0.363 tol=4.48
2024-12-07 23:52:13,850 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=58.9 pTM=0.452 ipTM=0.364 tol=5.37
2024-12-07 23:55:17,674 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=59 pTM=0.453 ipTM=0.357 tol=4.45
2024-12-07 23:58:21,502 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=59.1 pTM=0.452 ipTM=0.354 tol=2.25
2024-12-08 00:01:25,334 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=59 pTM=0.451 ipTM=0.358 tol=2.47
2024-12-08 00:04:29,142 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=58.9 pTM=0.457 ipTM=0.406 tol=1.8
2024-12-08 00:07:33,128 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=58.9 pTM=0.452 ipTM=0.356 tol=1.71
2024-12-08 00:10:37,157 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=58.8 pTM=0.444 ipTM=0.342 tol=1.85
2024-12-08 00:13:41,017 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=58.7 pTM=0.449 ipTM=0.359 tol=1.74
2024-12-08 00:16:44,884 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=58.8 pTM=0.448 ipTM=0.358 tol=1.88
2024-12-08 00:19:48,796 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=58.7 pTM=0.447 ipTM=0.345 tol=2.35
2024-12-08 00:22:52,634 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=59 pTM=0.451 ipTM=0.374 tol=2.78
2024-12-08 00:25:56,501 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=59 pTM=0.45 ipTM=0.341 tol=5.13
2024-12-08 00:25:56,504 alphafold2_multimer_v3_model_4_seed_000 took 5701.1s (30 recycles)
2024-12-08 00:29:04,797 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=58.5 pTM=0.435 ipTM=0.262
2024-12-08 00:32:08,431 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=59.7 pTM=0.432 ipTM=0.386 tol=13.2
2024-12-08 00:35:12,005 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=60.4 pTM=0.44 ipTM=0.316 tol=8.7
2024-12-08 00:38:15,610 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=60.6 pTM=0.443 ipTM=0.405 tol=6.6
2024-12-08 00:41:19,076 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=61.1 pTM=0.446 ipTM=0.407 tol=5.42
2024-12-08 00:44:22,474 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=61.6 pTM=0.452 ipTM=0.588 tol=6.14
2024-12-08 00:47:25,888 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=61.5 pTM=0.452 ipTM=0.663 tol=6.36
2024-12-08 00:50:29,305 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=62 pTM=0.454 ipTM=0.639 tol=5.61
2024-12-08 00:53:32,799 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=62 pTM=0.454 ipTM=0.633 tol=3.73
2024-12-08 00:56:36,362 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=62.2 pTM=0.458 ipTM=0.638 tol=5.61
2024-12-08 00:59:39,859 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=62.2 pTM=0.46 ipTM=0.642 tol=3.54
2024-12-08 01:02:43,349 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=62.2 pTM=0.461 ipTM=0.638 tol=4.48
2024-12-08 01:05:46,931 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=62.3 pTM=0.459 ipTM=0.632 tol=6.63
2024-12-08 01:08:50,434 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=62.4 pTM=0.463 ipTM=0.633 tol=7.26
2024-12-08 01:11:54,034 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=62.5 pTM=0.463 ipTM=0.658 tol=6.2
2024-12-08 01:14:57,701 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=62.5 pTM=0.463 ipTM=0.646 tol=4.71
2024-12-08 01:18:01,273 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=62.5 pTM=0.459 ipTM=0.651 tol=7.04
2024-12-08 01:21:04,864 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=62.6 pTM=0.46 ipTM=0.657 tol=6.68
2024-12-08 01:24:08,486 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=62.5 pTM=0.458 ipTM=0.658 tol=8.95
2024-12-08 01:27:12,022 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=62.6 pTM=0.46 ipTM=0.633 tol=4.63
2024-12-08 01:30:15,555 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=62.5 pTM=0.459 ipTM=0.635 tol=4.57
2024-12-08 01:33:19,160 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=62.8 pTM=0.465 ipTM=0.683 tol=5.05
2024-12-08 01:36:22,723 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=62.6 pTM=0.462 ipTM=0.667 tol=3.41
2024-12-08 01:39:26,373 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=62.8 pTM=0.466 ipTM=0.688 tol=3.13
2024-12-08 01:42:30,171 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=62.8 pTM=0.463 ipTM=0.678 tol=5.51
2024-12-08 01:45:33,867 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=62.7 pTM=0.464 ipTM=0.681 tol=6.18
2024-12-08 01:48:37,608 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=62.6 pTM=0.461 ipTM=0.663 tol=2.5
2024-12-08 01:51:41,447 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=62.6 pTM=0.461 ipTM=0.653 tol=2.82
2024-12-08 01:54:45,133 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=62.5 pTM=0.461 ipTM=0.657 tol=4.14
2024-12-08 01:57:48,810 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=62.6 pTM=0.457 ipTM=0.666 tol=3.92
2024-12-08 02:00:52,490 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=62.5 pTM=0.458 ipTM=0.651 tol=6.82
2024-12-08 02:00:52,493 alphafold2_multimer_v3_model_5_seed_000 took 5691.4s (30 recycles)
2024-12-08 02:00:57,027 reranking models by 'multimer' metric
2024-12-08 02:01:01,914 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-08 02:11:40,840 Relaxation took 643.8s
2024-12-08 02:11:40,841 rank_001_alphafold2_multimer_v3_model_5_seed_000 pLDDT=62.5 pTM=0.458 ipTM=0.651
2024-12-08 02:30:54,307 Relaxation took 1153.5s
2024-12-08 02:30:54,307 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=60.3 pTM=0.436 ipTM=0.569
2024-12-08 02:44:39,844 Relaxation took 825.5s
2024-12-08 02:44:39,845 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=61.1 pTM=0.462 ipTM=0.365
2024-12-08 02:52:40,854 Relaxation took 481.0s
2024-12-08 02:52:40,855 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=59 pTM=0.45 ipTM=0.341
2024-12-08 03:14:54,938 Relaxation took 1334.1s
2024-12-08 03:14:54,939 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=61.9 pTM=0.45 ipTM=0.316
2024-12-08 03:15:04,143 Done