2024-12-07 18:16:15,771 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-07 18:16:16,111 Running on GPU
2024-12-07 18:16:19,841 Found 6 citations for tools or databases
2024-12-07 18:16:19,841 Query 1/1: RBBP7_HAT1 (length 844)
2024-12-07 18:16:20,305 Sleeping for 5s. Reason: PENDING
2024-12-07 18:16:25,560 Sleeping for 9s. Reason: RUNNING
2024-12-07 18:16:34,824 Sleeping for 7s. Reason: RUNNING
2024-12-07 18:16:42,088 Sleeping for 9s. Reason: RUNNING
2024-12-07 18:16:51,346 Sleeping for 6s. Reason: RUNNING
2024-12-07 18:16:57,603 Sleeping for 10s. Reason: RUNNING
2024-12-07 18:17:07,872 Sleeping for 7s. Reason: RUNNING
2024-12-07 18:17:15,129 Sleeping for 7s. Reason: RUNNING
2024-12-07 18:17:22,386 Sleeping for 9s. Reason: RUNNING
2024-12-07 18:17:31,646 Sleeping for 6s. Reason: RUNNING
2024-12-07 18:17:37,903 Sleeping for 8s. Reason: RUNNING
2024-12-07 18:17:46,154 Sleeping for 7s. Reason: RUNNING
2024-12-07 18:17:53,410 Sleeping for 10s. Reason: RUNNING
2024-12-07 18:18:03,678 Sleeping for 8s. Reason: RUNNING
2024-12-07 18:18:11,928 Sleeping for 6s. Reason: RUNNING
2024-12-07 18:18:18,185 Sleeping for 8s. Reason: RUNNING
2024-12-07 18:18:26,442 Sleeping for 5s. Reason: RUNNING
2024-12-07 18:18:31,701 Sleeping for 9s. Reason: RUNNING
2024-12-07 18:18:42,458 Sleeping for 5s. Reason: PENDING
2024-12-07 18:18:47,722 Sleeping for 9s. Reason: RUNNING
2024-12-07 18:18:56,983 Sleeping for 5s. Reason: RUNNING
2024-12-07 18:19:02,237 Sleeping for 6s. Reason: RUNNING
2024-12-07 18:19:08,497 Sleeping for 7s. Reason: RUNNING
2024-12-07 18:19:15,751 Sleeping for 5s. Reason: RUNNING
2024-12-07 18:19:21,010 Sleeping for 5s. Reason: RUNNING
2024-12-07 18:19:26,265 Sleeping for 8s. Reason: RUNNING
2024-12-07 18:19:34,523 Sleeping for 8s. Reason: RUNNING
2024-12-07 18:19:42,781 Sleeping for 6s. Reason: RUNNING
2024-12-07 18:19:49,045 Sleeping for 6s. Reason: RUNNING
2024-12-07 18:19:55,298 Sleeping for 5s. Reason: RUNNING
2024-12-07 18:20:00,552 Sleeping for 8s. Reason: RUNNING
2024-12-07 18:20:08,817 Sleeping for 7s. Reason: RUNNING
2024-12-07 18:20:19,052 Setting max_seq=508, max_extra_seq=2048
2024-12-07 18:23:25,475 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=89.5 pTM=0.875 ipTM=0.842
2024-12-07 18:23:43,673 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=89.9 pTM=0.883 ipTM=0.862 tol=0.684
2024-12-07 18:24:01,872 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=89.9 pTM=0.879 ipTM=0.859 tol=0.354
2024-12-07 18:24:01,873 alphafold2_multimer_v3_model_1_seed_000 took 215.5s (2 recycles)
2024-12-07 18:24:20,658 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=89 pTM=0.873 ipTM=0.852
2024-12-07 18:24:38,938 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=89.5 pTM=0.873 ipTM=0.86 tol=0.917
2024-12-07 18:24:57,184 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=89.8 pTM=0.869 ipTM=0.851 tol=0.374
2024-12-07 18:24:57,185 alphafold2_multimer_v3_model_2_seed_000 took 54.8s (2 recycles)
2024-12-07 18:25:16,035 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=89.2 pTM=0.859 ipTM=0.814
2024-12-07 18:25:34,396 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=90.1 pTM=0.881 ipTM=0.855 tol=0.925
2024-12-07 18:25:52,746 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=90.1 pTM=0.879 ipTM=0.86 tol=0.383
2024-12-07 18:25:52,747 alphafold2_multimer_v3_model_3_seed_000 took 55.0s (2 recycles)
2024-12-07 18:26:11,659 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=89.6 pTM=0.867 ipTM=0.828
2024-12-07 18:26:30,065 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=90.6 pTM=0.888 ipTM=0.868 tol=1.13
2024-12-07 18:26:48,416 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=90.5 pTM=0.883 ipTM=0.865 tol=0.341
2024-12-07 18:26:48,417 alphafold2_multimer_v3_model_4_seed_000 took 55.1s (2 recycles)
2024-12-07 18:27:07,344 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=89.2 pTM=0.87 ipTM=0.829
2024-12-07 18:27:25,738 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=89.9 pTM=0.879 ipTM=0.851 tol=0.597
2024-12-07 18:27:44,100 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=90.2 pTM=0.878 ipTM=0.854 tol=0.355
2024-12-07 18:27:44,101 alphafold2_multimer_v3_model_5_seed_000 took 55.1s (2 recycles)
2024-12-07 18:27:44,661 reranking models by 'multimer' metric
2024-12-07 18:27:46,727 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-07 18:28:25,742 Relaxation took 41.1s
2024-12-07 18:28:25,742 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=90.5 pTM=0.883 ipTM=0.865
2024-12-07 18:28:59,404 Relaxation took 33.7s
2024-12-07 18:28:59,404 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=90.1 pTM=0.879 ipTM=0.86
2024-12-07 18:29:54,993 Relaxation took 55.6s
2024-12-07 18:29:54,993 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=89.9 pTM=0.879 ipTM=0.859
2024-12-07 18:30:29,251 Relaxation took 34.3s
2024-12-07 18:30:29,251 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=90.2 pTM=0.878 ipTM=0.854
2024-12-07 18:31:02,226 Relaxation took 33.0s
2024-12-07 18:31:02,227 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=89.8 pTM=0.869 ipTM=0.851
2024-12-07 18:31:04,046 Done