2024-12-07 18:31:39,652 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-07 18:31:40,012 Running on GPU
2024-12-07 18:31:43,417 Found 6 citations for tools or databases
2024-12-07 18:31:43,417 Query 1/1: RBBP7_HIST1H3E (length 561)
2024-12-07 18:31:43,704 Sleeping for 5s. Reason: PENDING
2024-12-07 18:31:48,964 Sleeping for 10s. Reason: RUNNING
2024-12-07 18:31:59,229 Sleeping for 10s. Reason: RUNNING
2024-12-07 18:32:09,490 Sleeping for 10s. Reason: RUNNING
2024-12-07 18:32:19,756 Sleeping for 9s. Reason: RUNNING
2024-12-07 18:32:29,023 Sleeping for 6s. Reason: RUNNING
2024-12-07 18:32:35,282 Sleeping for 9s. Reason: RUNNING
2024-12-07 18:32:44,541 Sleeping for 5s. Reason: RUNNING
2024-12-07 18:32:49,797 Sleeping for 9s. Reason: RUNNING
2024-12-07 18:32:59,061 Sleeping for 9s. Reason: RUNNING
2024-12-07 18:33:08,316 Sleeping for 7s. Reason: RUNNING
2024-12-07 18:33:15,573 Sleeping for 5s. Reason: RUNNING
2024-12-07 18:33:20,829 Sleeping for 9s. Reason: RUNNING
2024-12-07 18:33:30,096 Sleeping for 8s. Reason: RUNNING
2024-12-07 18:33:38,363 Sleeping for 8s. Reason: RUNNING
2024-12-07 18:33:48,260 Sleeping for 7s. Reason: PENDING
2024-12-07 18:33:55,519 Sleeping for 7s. Reason: RUNNING
2024-12-07 18:34:02,785 Sleeping for 9s. Reason: RUNNING
2024-12-07 18:34:12,047 Sleeping for 10s. Reason: RUNNING
2024-12-07 18:34:22,308 Sleeping for 9s. Reason: RUNNING
2024-12-07 18:34:31,575 Sleeping for 5s. Reason: RUNNING
2024-12-07 18:34:36,838 Sleeping for 10s. Reason: RUNNING
2024-12-07 18:34:47,099 Sleeping for 10s. Reason: RUNNING
2024-12-07 18:34:57,360 Sleeping for 6s. Reason: RUNNING
2024-12-07 18:35:09,323 Setting max_seq=508, max_extra_seq=2048
2024-12-07 18:38:58,659 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=71.4 pTM=0.736 ipTM=0.252
2024-12-07 18:39:07,584 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=70.9 pTM=0.733 ipTM=0.232 tol=8.84
2024-12-07 18:39:16,495 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=70.2 pTM=0.726 ipTM=0.212 tol=3.77
2024-12-07 18:39:25,417 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=71 pTM=0.739 ipTM=0.272 tol=3.5
2024-12-07 18:39:34,344 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=70.9 pTM=0.742 ipTM=0.281 tol=2.2
2024-12-07 18:39:43,261 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=71.2 pTM=0.748 ipTM=0.302 tol=1.22
2024-12-07 18:39:52,190 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=70.9 pTM=0.743 ipTM=0.28 tol=1.11
2024-12-07 18:40:01,091 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=70.4 pTM=0.734 ipTM=0.26 tol=2.95
2024-12-07 18:40:09,995 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=70.5 pTM=0.728 ipTM=0.227 tol=2.42
2024-12-07 18:40:18,901 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=70.6 pTM=0.739 ipTM=0.283 tol=2.44
2024-12-07 18:40:27,819 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=70.8 pTM=0.745 ipTM=0.294 tol=1.95
2024-12-07 18:40:36,751 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=70.8 pTM=0.732 ipTM=0.254 tol=2.62
2024-12-07 18:40:45,666 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=71.5 pTM=0.721 ipTM=0.203 tol=4.61
2024-12-07 18:40:54,596 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=71.2 pTM=0.729 ipTM=0.225 tol=3.38
2024-12-07 18:41:03,521 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=71 pTM=0.734 ipTM=0.254 tol=3.06
2024-12-07 18:41:12,480 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=70.8 pTM=0.734 ipTM=0.252 tol=2.11
2024-12-07 18:41:21,419 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=70.6 pTM=0.733 ipTM=0.257 tol=1.9
2024-12-07 18:41:30,349 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=70.7 pTM=0.729 ipTM=0.242 tol=2.79
2024-12-07 18:41:39,265 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=71.1 pTM=0.74 ipTM=0.495 tol=2.49
2024-12-07 18:41:48,182 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=71.4 pTM=0.743 ipTM=0.594 tol=3.66
2024-12-07 18:41:57,099 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=73.3 pTM=0.748 ipTM=0.643 tol=3.67
2024-12-07 18:42:06,036 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=74.7 pTM=0.761 ipTM=0.69 tol=2.19
2024-12-07 18:42:14,976 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=74 pTM=0.762 ipTM=0.709 tol=1.97
2024-12-07 18:42:23,915 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=74.4 pTM=0.771 ipTM=0.715 tol=0.871
2024-12-07 18:42:32,863 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=74.1 pTM=0.766 ipTM=0.723 tol=1.7
2024-12-07 18:42:41,845 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=74.1 pTM=0.767 ipTM=0.706 tol=1.6
2024-12-07 18:42:50,794 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=74.7 pTM=0.772 ipTM=0.718 tol=1.35
2024-12-07 18:42:59,743 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=74.4 pTM=0.767 ipTM=0.729 tol=2.44
2024-12-07 18:43:08,685 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=74.4 pTM=0.773 ipTM=0.724 tol=1.86
2024-12-07 18:43:17,640 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=73.9 pTM=0.767 ipTM=0.731 tol=1.16
2024-12-07 18:43:26,595 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=74.4 pTM=0.777 ipTM=0.725 tol=1.42
2024-12-07 18:43:26,596 alphafold2_multimer_v3_model_1_seed_000 took 490.4s (30 recycles)
2024-12-07 18:43:35,781 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=71.6 pTM=0.707 ipTM=0.151
2024-12-07 18:43:44,714 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=71.8 pTM=0.708 ipTM=0.15 tol=6.23
2024-12-07 18:43:53,608 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=72.2 pTM=0.704 ipTM=0.147 tol=6.16
2024-12-07 18:44:02,504 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=73 pTM=0.704 ipTM=0.148 tol=5.66
2024-12-07 18:44:11,399 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=73.2 pTM=0.705 ipTM=0.147 tol=3.57
2024-12-07 18:44:20,286 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=73.2 pTM=0.701 ipTM=0.142 tol=2.29
2024-12-07 18:44:29,173 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=73.4 pTM=0.703 ipTM=0.153 tol=1.89
2024-12-07 18:44:38,088 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=73.3 pTM=0.7 ipTM=0.143 tol=1.75
2024-12-07 18:44:46,975 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=73.2 pTM=0.7 ipTM=0.149 tol=1.73
2024-12-07 18:44:55,848 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=73.4 pTM=0.706 ipTM=0.21 tol=2.05
2024-12-07 18:45:04,728 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=73.8 pTM=0.698 ipTM=0.133 tol=3.86
2024-12-07 18:45:13,604 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=73.4 pTM=0.702 ipTM=0.148 tol=2.59
2024-12-07 18:45:22,477 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=73.6 pTM=0.7 ipTM=0.157 tol=1.85
2024-12-07 18:45:31,349 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=73.5 pTM=0.704 ipTM=0.156 tol=6.47
2024-12-07 18:45:40,213 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=73.9 pTM=0.702 ipTM=0.147 tol=2.39
2024-12-07 18:45:49,105 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=73.5 pTM=0.701 ipTM=0.147 tol=2.92
2024-12-07 18:45:57,983 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=73.8 pTM=0.699 ipTM=0.148 tol=1.83
2024-12-07 18:46:06,862 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=73.7 pTM=0.701 ipTM=0.149 tol=2.87
2024-12-07 18:46:15,726 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=73.5 pTM=0.696 ipTM=0.139 tol=2.01
2024-12-07 18:46:24,580 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=73 pTM=0.697 ipTM=0.146 tol=2.47
2024-12-07 18:46:33,477 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=73.2 pTM=0.7 ipTM=0.146 tol=2.42
2024-12-07 18:46:42,380 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=73.2 pTM=0.7 ipTM=0.147 tol=1.6
2024-12-07 18:46:51,282 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=73.4 pTM=0.698 ipTM=0.138 tol=1.72
2024-12-07 18:47:00,155 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=73.4 pTM=0.7 ipTM=0.15 tol=1.06
2024-12-07 18:47:09,038 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=73.7 pTM=0.702 ipTM=0.159 tol=1.55
2024-12-07 18:47:17,905 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=73.4 pTM=0.7 ipTM=0.15 tol=1.59
2024-12-07 18:47:26,774 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=73.1 pTM=0.7 ipTM=0.144 tol=2.19
2024-12-07 18:47:35,648 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=73.6 pTM=0.7 ipTM=0.148 tol=2.38
2024-12-07 18:47:44,525 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=73.4 pTM=0.699 ipTM=0.142 tol=1.92
2024-12-07 18:47:53,399 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=72.9 pTM=0.701 ipTM=0.149 tol=5.88
2024-12-07 18:48:02,274 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=73.2 pTM=0.703 ipTM=0.16 tol=3.58
2024-12-07 18:48:02,275 alphafold2_multimer_v3_model_2_seed_000 took 275.4s (30 recycles)
2024-12-07 18:48:11,472 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=73.9 pTM=0.74 ipTM=0.272
2024-12-07 18:48:20,444 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=75.4 pTM=0.758 ipTM=0.492 tol=7.09
2024-12-07 18:48:29,426 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=73.7 pTM=0.744 ipTM=0.267 tol=6.77
2024-12-07 18:48:38,406 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=73.6 pTM=0.741 ipTM=0.248 tol=4.13
2024-12-07 18:48:47,376 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=73.2 pTM=0.748 ipTM=0.283 tol=3.8
2024-12-07 18:48:56,328 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=73.9 pTM=0.751 ipTM=0.55 tol=3
2024-12-07 18:49:05,291 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=74.9 pTM=0.753 ipTM=0.617 tol=1.06
2024-12-07 18:49:14,244 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=74.3 pTM=0.75 ipTM=0.623 tol=1.7
2024-12-07 18:49:23,214 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=75.6 pTM=0.743 ipTM=0.621 tol=7.84
2024-12-07 18:49:32,190 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=75.2 pTM=0.754 ipTM=0.631 tol=6.64
2024-12-07 18:49:41,169 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=75.5 pTM=0.757 ipTM=0.647 tol=3.37
2024-12-07 18:49:50,129 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=75.5 pTM=0.752 ipTM=0.648 tol=1.86
2024-12-07 18:49:59,070 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=75.4 pTM=0.752 ipTM=0.643 tol=1.01
2024-12-07 18:50:08,021 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=75.6 pTM=0.752 ipTM=0.65 tol=2.05
2024-12-07 18:50:16,982 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=75.8 pTM=0.756 ipTM=0.643 tol=0.928
2024-12-07 18:50:25,946 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=75.2 pTM=0.75 ipTM=0.633 tol=1.71
2024-12-07 18:50:34,911 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=75.2 pTM=0.751 ipTM=0.615 tol=2.99
2024-12-07 18:50:43,861 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=75.5 pTM=0.748 ipTM=0.629 tol=2.23
2024-12-07 18:50:52,813 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=75.2 pTM=0.752 ipTM=0.636 tol=1.62
2024-12-07 18:51:01,753 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=75.4 pTM=0.742 ipTM=0.612 tol=2.98
2024-12-07 18:51:10,714 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=75.3 pTM=0.75 ipTM=0.621 tol=1.18
2024-12-07 18:51:19,677 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=76 pTM=0.747 ipTM=0.615 tol=1.23
2024-12-07 18:51:28,635 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=76.2 pTM=0.744 ipTM=0.61 tol=1.47
2024-12-07 18:51:37,576 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=77.6 pTM=0.746 ipTM=0.627 tol=1.58
2024-12-07 18:51:46,510 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=76.8 pTM=0.749 ipTM=0.63 tol=2.12
2024-12-07 18:51:55,449 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=78.1 pTM=0.741 ipTM=0.616 tol=5.21
2024-12-07 18:52:04,383 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=77.1 pTM=0.747 ipTM=0.619 tol=3.67
2024-12-07 18:52:13,343 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=77.4 pTM=0.746 ipTM=0.629 tol=1.77
2024-12-07 18:52:22,304 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=77.7 pTM=0.75 ipTM=0.615 tol=1.55
2024-12-07 18:52:31,258 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=77.9 pTM=0.749 ipTM=0.623 tol=1
2024-12-07 18:52:40,187 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=77.2 pTM=0.744 ipTM=0.628 tol=2.95
2024-12-07 18:52:40,187 alphafold2_multimer_v3_model_3_seed_000 took 277.6s (30 recycles)
2024-12-07 18:52:49,384 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=73.5 pTM=0.745 ipTM=0.287
2024-12-07 18:52:58,315 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=71.2 pTM=0.748 ipTM=0.279 tol=11.5
2024-12-07 18:53:07,236 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=70.5 pTM=0.727 ipTM=0.198 tol=6.89
2024-12-07 18:53:16,125 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=72.1 pTM=0.72 ipTM=0.179 tol=7.1
2024-12-07 18:53:25,039 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=71.2 pTM=0.728 ipTM=0.216 tol=3.28
2024-12-07 18:53:33,951 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=70.8 pTM=0.735 ipTM=0.263 tol=2.3
2024-12-07 18:53:42,887 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=70.9 pTM=0.737 ipTM=0.341 tol=1.48
2024-12-07 18:53:51,791 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=71.4 pTM=0.729 ipTM=0.304 tol=1.71
2024-12-07 18:54:00,687 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=70.9 pTM=0.73 ipTM=0.3 tol=1.39
2024-12-07 18:54:09,588 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=70.8 pTM=0.736 ipTM=0.286 tol=1.62
2024-12-07 18:54:18,516 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=70.3 pTM=0.731 ipTM=0.298 tol=1.65
2024-12-07 18:54:27,433 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=70.4 pTM=0.731 ipTM=0.275 tol=1.55
2024-12-07 18:54:36,345 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=70.9 pTM=0.735 ipTM=0.301 tol=1.26
2024-12-07 18:54:45,277 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=70.8 pTM=0.737 ipTM=0.315 tol=1.78
2024-12-07 18:54:54,181 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=70.6 pTM=0.734 ipTM=0.309 tol=2.1
2024-12-07 18:55:03,091 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=70 pTM=0.729 ipTM=0.289 tol=1.21
2024-12-07 18:55:12,015 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=70.4 pTM=0.733 ipTM=0.311 tol=2.28
2024-12-07 18:55:20,930 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=70.4 pTM=0.734 ipTM=0.323 tol=2.11
2024-12-07 18:55:29,823 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=70.4 pTM=0.733 ipTM=0.304 tol=1.69
2024-12-07 18:55:38,705 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=70 pTM=0.73 ipTM=0.306 tol=0.98
2024-12-07 18:55:47,603 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=70.7 pTM=0.736 ipTM=0.315 tol=1.07
2024-12-07 18:55:56,498 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=70.1 pTM=0.735 ipTM=0.297 tol=1.38
2024-12-07 18:56:05,411 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=70.6 pTM=0.736 ipTM=0.342 tol=2.83
2024-12-07 18:56:14,303 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=70.8 pTM=0.735 ipTM=0.322 tol=1.67
2024-12-07 18:56:23,223 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=70.6 pTM=0.733 ipTM=0.354 tol=2.07
2024-12-07 18:56:32,107 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=71.2 pTM=0.729 ipTM=0.274 tol=3.25
2024-12-07 18:56:41,027 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=70.8 pTM=0.736 ipTM=0.334 tol=1.68
2024-12-07 18:56:49,933 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=70.4 pTM=0.734 ipTM=0.312 tol=2.37
2024-12-07 18:56:58,839 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=70.4 pTM=0.738 ipTM=0.303 tol=1.35
2024-12-07 18:57:07,749 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=70.8 pTM=0.739 ipTM=0.313 tol=2.61
2024-12-07 18:57:16,661 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=70.7 pTM=0.74 ipTM=0.325 tol=1.71
2024-12-07 18:57:16,661 alphafold2_multimer_v3_model_4_seed_000 took 276.2s (30 recycles)
2024-12-07 18:57:25,863 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=72.7 pTM=0.724 ipTM=0.223
2024-12-07 18:57:34,809 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=73.2 pTM=0.724 ipTM=0.196 tol=6.1
2024-12-07 18:57:43,759 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=73.2 pTM=0.72 ipTM=0.181 tol=4.74
2024-12-07 18:57:52,708 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=74.5 pTM=0.719 ipTM=0.177 tol=4.09
2024-12-07 18:58:01,661 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=75.4 pTM=0.723 ipTM=0.189 tol=2.08
2024-12-07 18:58:10,607 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=76.2 pTM=0.715 ipTM=0.159 tol=2.32
2024-12-07 18:58:19,578 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=75.5 pTM=0.718 ipTM=0.166 tol=4.95
2024-12-07 18:58:28,534 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=75.9 pTM=0.717 ipTM=0.169 tol=1.82
2024-12-07 18:58:37,479 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=75.5 pTM=0.711 ipTM=0.143 tol=2.5
2024-12-07 18:58:46,416 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=76 pTM=0.713 ipTM=0.151 tol=2.5
2024-12-07 18:58:55,376 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=75.4 pTM=0.711 ipTM=0.145 tol=2.07
2024-12-07 18:59:04,319 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=75.6 pTM=0.714 ipTM=0.154 tol=5.16
2024-12-07 18:59:13,267 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=75.6 pTM=0.716 ipTM=0.161 tol=3.24
2024-12-07 18:59:22,237 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=76.2 pTM=0.718 ipTM=0.165 tol=4.79
2024-12-07 18:59:31,199 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=76.1 pTM=0.717 ipTM=0.164 tol=2.17
2024-12-07 18:59:40,162 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=75.6 pTM=0.717 ipTM=0.162 tol=2.93
2024-12-07 18:59:49,104 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=75 pTM=0.713 ipTM=0.151 tol=2.06
2024-12-07 18:59:58,051 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=75.8 pTM=0.712 ipTM=0.143 tol=2.41
2024-12-07 19:00:06,998 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=75.9 pTM=0.709 ipTM=0.134 tol=2.85
2024-12-07 19:00:15,964 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=75.3 pTM=0.712 ipTM=0.149 tol=2.99
2024-12-07 19:00:24,920 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=75.8 pTM=0.712 ipTM=0.145 tol=3.99
2024-12-07 19:00:33,873 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=74.9 pTM=0.709 ipTM=0.14 tol=2.77
2024-12-07 19:00:42,848 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=75.4 pTM=0.715 ipTM=0.161 tol=5.34
2024-12-07 19:00:51,809 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=75.8 pTM=0.714 ipTM=0.156 tol=2.7
2024-12-07 19:01:00,748 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=75.2 pTM=0.717 ipTM=0.164 tol=2.65
2024-12-07 19:01:09,708 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=75.9 pTM=0.72 ipTM=0.181 tol=3.15
2024-12-07 19:01:18,664 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=75.8 pTM=0.716 ipTM=0.165 tol=3.75
2024-12-07 19:01:27,611 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=75.9 pTM=0.717 ipTM=0.167 tol=3.63
2024-12-07 19:01:36,547 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=75.6 pTM=0.718 ipTM=0.17 tol=1.48
2024-12-07 19:01:45,471 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=75.8 pTM=0.713 ipTM=0.149 tol=6.98
2024-12-07 19:01:54,416 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=76.1 pTM=0.713 ipTM=0.15 tol=3.37
2024-12-07 19:01:54,417 alphafold2_multimer_v3_model_5_seed_000 took 277.5s (30 recycles)
2024-12-07 19:01:54,682 reranking models by 'multimer' metric
2024-12-07 19:01:56,542 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-07 19:02:45,513 Relaxation took 50.8s
2024-12-07 19:02:45,513 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=74.4 pTM=0.777 ipTM=0.725
2024-12-07 19:03:28,728 Relaxation took 43.2s
2024-12-07 19:03:28,728 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=77.2 pTM=0.744 ipTM=0.628
2024-12-07 19:04:21,080 Relaxation took 52.4s
2024-12-07 19:04:21,080 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=70.7 pTM=0.74 ipTM=0.325
2024-12-07 19:05:20,645 Relaxation took 59.6s
2024-12-07 19:05:20,646 rank_004_alphafold2_multimer_v3_model_2_seed_000 pLDDT=73.2 pTM=0.703 ipTM=0.16
2024-12-07 19:06:11,376 Relaxation took 50.7s
2024-12-07 19:06:11,376 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=76.1 pTM=0.713 ipTM=0.15
2024-12-07 19:06:12,725 Done