2024-12-07 18:50:41,021 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-07 18:50:41,336 Running on GPU
2024-12-07 18:50:45,056 Found 6 citations for tools or databases
2024-12-07 18:50:45,056 Query 1/1: RBBP7_MBD2 (length 836)
2024-12-07 18:50:45,340 Sleeping for 9s. Reason: PENDING
2024-12-07 18:50:54,599 Sleeping for 7s. Reason: RUNNING
2024-12-07 18:51:01,855 Sleeping for 7s. Reason: RUNNING
2024-12-07 18:51:09,120 Sleeping for 5s. Reason: RUNNING
2024-12-07 18:51:14,376 Sleeping for 5s. Reason: RUNNING
2024-12-07 18:51:19,632 Sleeping for 7s. Reason: RUNNING
2024-12-07 18:51:26,886 Sleeping for 6s. Reason: RUNNING
2024-12-07 18:51:33,140 Sleeping for 8s. Reason: RUNNING
2024-12-07 18:51:41,405 Sleeping for 10s. Reason: RUNNING
2024-12-07 18:51:51,665 Sleeping for 8s. Reason: RUNNING
2024-12-07 18:51:59,937 Sleeping for 6s. Reason: RUNNING
2024-12-07 18:52:06,195 Sleeping for 6s. Reason: RUNNING
2024-12-07 18:52:12,450 Sleeping for 7s. Reason: RUNNING
2024-12-07 18:52:19,716 Sleeping for 9s. Reason: RUNNING
2024-12-07 18:52:28,975 Sleeping for 8s. Reason: RUNNING
2024-12-07 18:52:37,232 Sleeping for 6s. Reason: RUNNING
2024-12-07 18:52:43,489 Sleeping for 9s. Reason: RUNNING
2024-12-07 18:52:54,475 Sleeping for 8s. Reason: PENDING
2024-12-07 18:53:02,741 Sleeping for 6s. Reason: RUNNING
2024-12-07 18:53:09,000 Sleeping for 10s. Reason: RUNNING
2024-12-07 18:53:19,258 Sleeping for 7s. Reason: RUNNING
2024-12-07 18:53:26,517 Sleeping for 8s. Reason: RUNNING
2024-12-07 18:53:34,776 Sleeping for 7s. Reason: RUNNING
2024-12-07 18:53:42,037 Sleeping for 8s. Reason: RUNNING
2024-12-07 18:53:50,305 Sleeping for 6s. Reason: RUNNING
2024-12-07 18:53:56,565 Sleeping for 10s. Reason: RUNNING
2024-12-07 18:54:06,820 Sleeping for 6s. Reason: RUNNING
2024-12-07 18:54:15,386 Setting max_seq=508, max_extra_seq=2048
2024-12-07 18:56:35,695 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=60.8 pTM=0.542 ipTM=0.229
2024-12-07 18:56:50,154 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=63.2 pTM=0.532 ipTM=0.212 tol=9.45
2024-12-07 18:57:04,655 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=62.6 pTM=0.534 ipTM=0.189 tol=6.81
2024-12-07 18:57:19,165 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=62.6 pTM=0.531 ipTM=0.186 tol=4.07
2024-12-07 18:57:33,724 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=62.1 pTM=0.53 ipTM=0.181 tol=3.64
2024-12-07 18:57:48,258 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=61.6 pTM=0.527 ipTM=0.168 tol=4.3
2024-12-07 18:58:02,829 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=61.8 pTM=0.528 ipTM=0.173 tol=3.59
2024-12-07 18:58:17,421 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=62.1 pTM=0.526 ipTM=0.169 tol=2.56
2024-12-07 18:58:32,012 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=62.2 pTM=0.526 ipTM=0.172 tol=3.13
2024-12-07 18:58:46,587 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=62.2 pTM=0.525 ipTM=0.169 tol=1.9
2024-12-07 18:59:01,170 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=61.8 pTM=0.526 ipTM=0.168 tol=2
2024-12-07 18:59:15,777 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=62.2 pTM=0.527 ipTM=0.168 tol=2.18
2024-12-07 18:59:30,383 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=62.2 pTM=0.526 ipTM=0.169 tol=2.23
2024-12-07 18:59:44,996 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=62.1 pTM=0.527 ipTM=0.173 tol=2.04
2024-12-07 18:59:59,617 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=62.1 pTM=0.527 ipTM=0.166 tol=1.91
2024-12-07 19:00:14,222 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=62.5 pTM=0.524 ipTM=0.168 tol=1.51
2024-12-07 19:00:28,858 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=62.8 pTM=0.523 ipTM=0.164 tol=1.39
2024-12-07 19:00:43,479 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=62.9 pTM=0.524 ipTM=0.166 tol=1.95
2024-12-07 19:00:58,101 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=62.9 pTM=0.522 ipTM=0.168 tol=1.74
2024-12-07 19:01:12,727 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=63.2 pTM=0.523 ipTM=0.164 tol=2.75
2024-12-07 19:01:27,382 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=62.9 pTM=0.523 ipTM=0.159 tol=3.06
2024-12-07 19:01:42,019 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=62.6 pTM=0.522 ipTM=0.163 tol=3.91
2024-12-07 19:01:56,632 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=62.7 pTM=0.523 ipTM=0.164 tol=3.73
2024-12-07 19:02:11,247 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=62.8 pTM=0.523 ipTM=0.167 tol=2.4
2024-12-07 19:02:25,877 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=62.9 pTM=0.522 ipTM=0.16 tol=1.88
2024-12-07 19:02:40,484 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=62.8 pTM=0.524 ipTM=0.166 tol=1.55
2024-12-07 19:02:55,114 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=63 pTM=0.522 ipTM=0.164 tol=2.42
2024-12-07 19:03:09,754 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=63.2 pTM=0.523 ipTM=0.163 tol=2.95
2024-12-07 19:03:24,392 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=63.3 pTM=0.523 ipTM=0.163 tol=3.36
2024-12-07 19:03:39,018 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=63.1 pTM=0.522 ipTM=0.166 tol=2.16
2024-12-07 19:03:53,638 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=62.9 pTM=0.523 ipTM=0.165 tol=2.96
2024-12-07 19:03:53,639 alphafold2_multimer_v3_model_1_seed_000 took 573.1s (30 recycles)
2024-12-07 19:04:08,682 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=60.6 pTM=0.52 ipTM=0.171
2024-12-07 19:04:23,299 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=62.2 pTM=0.52 ipTM=0.152 tol=8.67
2024-12-07 19:04:37,926 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=62.3 pTM=0.523 ipTM=0.156 tol=7.43
2024-12-07 19:04:52,544 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=62.4 pTM=0.525 ipTM=0.156 tol=4.81
2024-12-07 19:05:07,182 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=62.1 pTM=0.523 ipTM=0.155 tol=3.42
2024-12-07 19:05:21,807 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=62.1 pTM=0.524 ipTM=0.153 tol=3.53
2024-12-07 19:05:36,442 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=62.7 pTM=0.526 ipTM=0.151 tol=3.9
2024-12-07 19:05:51,108 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=62.7 pTM=0.53 ipTM=0.196 tol=3.76
2024-12-07 19:06:05,752 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=62.9 pTM=0.527 ipTM=0.159 tol=3.09
2024-12-07 19:06:20,388 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=62.4 pTM=0.524 ipTM=0.167 tol=2.82
2024-12-07 19:06:35,031 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=62.3 pTM=0.527 ipTM=0.181 tol=2.89
2024-12-07 19:06:49,685 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=62.7 pTM=0.528 ipTM=0.186 tol=1.97
2024-12-07 19:07:04,360 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=62.8 pTM=0.528 ipTM=0.172 tol=2.61
2024-12-07 19:07:19,012 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=62.8 pTM=0.525 ipTM=0.178 tol=2.49
2024-12-07 19:07:33,683 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=62.8 pTM=0.526 ipTM=0.166 tol=1.49
2024-12-07 19:07:48,350 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=62.9 pTM=0.527 ipTM=0.172 tol=1.27
2024-12-07 19:08:03,025 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=62.7 pTM=0.525 ipTM=0.187 tol=5.82
2024-12-07 19:08:17,664 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=62.7 pTM=0.524 ipTM=0.166 tol=4.96
2024-12-07 19:08:32,280 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=62.2 pTM=0.52 ipTM=0.15 tol=2.25
2024-12-07 19:08:46,937 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=62.8 pTM=0.524 ipTM=0.163 tol=2.52
2024-12-07 19:09:01,588 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=62.5 pTM=0.522 ipTM=0.158 tol=2.88
2024-12-07 19:09:16,256 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=62.5 pTM=0.522 ipTM=0.16 tol=2.67
2024-12-07 19:09:30,925 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=62.8 pTM=0.521 ipTM=0.151 tol=2.83
2024-12-07 19:09:45,597 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=62.7 pTM=0.522 ipTM=0.152 tol=3.63
2024-12-07 19:10:00,260 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=63.1 pTM=0.522 ipTM=0.15 tol=3.28
2024-12-07 19:10:14,924 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=63.1 pTM=0.522 ipTM=0.151 tol=3.5
2024-12-07 19:10:29,606 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=63 pTM=0.522 ipTM=0.154 tol=4.28
2024-12-07 19:10:44,286 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=62.9 pTM=0.524 ipTM=0.16 tol=4.97
2024-12-07 19:10:58,943 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=63.1 pTM=0.524 ipTM=0.162 tol=7.25
2024-12-07 19:11:13,634 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=62.8 pTM=0.526 ipTM=0.184 tol=3.62
2024-12-07 19:11:28,256 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=62.5 pTM=0.525 ipTM=0.182 tol=6.14
2024-12-07 19:11:28,257 alphafold2_multimer_v3_model_2_seed_000 took 454.2s (30 recycles)
2024-12-07 19:11:43,430 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=61.3 pTM=0.538 ipTM=0.219
2024-12-07 19:11:58,141 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=63.3 pTM=0.54 ipTM=0.218 tol=9.45
2024-12-07 19:12:12,856 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=63.2 pTM=0.534 ipTM=0.194 tol=4.65
2024-12-07 19:12:27,569 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=63.3 pTM=0.534 ipTM=0.167 tol=3.87
2024-12-07 19:12:42,286 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=62.8 pTM=0.534 ipTM=0.194 tol=3.76
2024-12-07 19:12:57,015 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=62.7 pTM=0.532 ipTM=0.172 tol=4.14
2024-12-07 19:13:11,736 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=63.2 pTM=0.536 ipTM=0.215 tol=5.69
2024-12-07 19:13:26,482 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=63.2 pTM=0.532 ipTM=0.177 tol=4.7
2024-12-07 19:13:41,214 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=63.4 pTM=0.537 ipTM=0.225 tol=5.3
2024-12-07 19:13:55,952 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=62.9 pTM=0.531 ipTM=0.18 tol=5.55
2024-12-07 19:14:10,644 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=63 pTM=0.54 ipTM=0.219 tol=2.41
2024-12-07 19:14:25,374 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=63.2 pTM=0.534 ipTM=0.187 tol=1.86
2024-12-07 19:14:40,054 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=63.3 pTM=0.54 ipTM=0.212 tol=2.12
2024-12-07 19:14:54,778 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=63.5 pTM=0.535 ipTM=0.191 tol=3.86
2024-12-07 19:15:09,493 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=63.4 pTM=0.541 ipTM=0.219 tol=6.81
2024-12-07 19:15:24,226 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=62.9 pTM=0.536 ipTM=0.211 tol=5.19
2024-12-07 19:15:38,941 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=63 pTM=0.538 ipTM=0.211 tol=2.99
2024-12-07 19:15:53,630 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=63.3 pTM=0.536 ipTM=0.212 tol=1.65
2024-12-07 19:16:08,335 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=63.6 pTM=0.539 ipTM=0.206 tol=1.28
2024-12-07 19:16:23,059 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=63.5 pTM=0.538 ipTM=0.204 tol=1.25
2024-12-07 19:16:37,750 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=63.7 pTM=0.541 ipTM=0.238 tol=1.69
2024-12-07 19:16:52,445 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=63.3 pTM=0.536 ipTM=0.202 tol=1.4
2024-12-07 19:17:07,157 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=63.7 pTM=0.541 ipTM=0.231 tol=2.32
2024-12-07 19:17:21,818 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=63.2 pTM=0.535 ipTM=0.204 tol=4.72
2024-12-07 19:17:36,490 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=63.6 pTM=0.541 ipTM=0.211 tol=3.76
2024-12-07 19:17:51,187 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=63.5 pTM=0.537 ipTM=0.212 tol=2.09
2024-12-07 19:18:05,890 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=63.9 pTM=0.542 ipTM=0.219 tol=3.44
2024-12-07 19:18:20,595 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=63.4 pTM=0.539 ipTM=0.206 tol=4.64
2024-12-07 19:18:35,294 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=63.8 pTM=0.542 ipTM=0.207 tol=3.13
2024-12-07 19:18:49,998 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=63.4 pTM=0.537 ipTM=0.198 tol=2.37
2024-12-07 19:19:04,708 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=63.5 pTM=0.539 ipTM=0.207 tol=2.38
2024-12-07 19:19:04,708 alphafold2_multimer_v3_model_3_seed_000 took 456.0s (30 recycles)
2024-12-07 19:19:19,806 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=60 pTM=0.524 ipTM=0.167
2024-12-07 19:19:34,434 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=61.1 pTM=0.526 ipTM=0.161 tol=6.77
2024-12-07 19:19:49,094 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=61.4 pTM=0.521 ipTM=0.154 tol=5.52
2024-12-07 19:20:03,736 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=61.2 pTM=0.524 ipTM=0.151 tol=3.75
2024-12-07 19:20:18,404 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=61.2 pTM=0.523 ipTM=0.15 tol=8.73
2024-12-07 19:20:33,049 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=61 pTM=0.529 ipTM=0.235 tol=4.94
2024-12-07 19:20:47,725 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=61.3 pTM=0.531 ipTM=0.263 tol=5.91
2024-12-07 19:21:02,389 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=61.3 pTM=0.53 ipTM=0.278 tol=5.64
2024-12-07 19:21:17,041 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=61.3 pTM=0.53 ipTM=0.29 tol=3.12
2024-12-07 19:21:31,681 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=61 pTM=0.532 ipTM=0.32 tol=3.39
2024-12-07 19:21:46,330 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=61 pTM=0.532 ipTM=0.316 tol=2.18
2024-12-07 19:22:00,976 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=60.9 pTM=0.534 ipTM=0.326 tol=2.44
2024-12-07 19:22:15,647 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=61.5 pTM=0.532 ipTM=0.325 tol=2.14
2024-12-07 19:22:30,330 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=61.4 pTM=0.536 ipTM=0.342 tol=2.95
2024-12-07 19:22:45,003 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=61.3 pTM=0.531 ipTM=0.322 tol=3.51
2024-12-07 19:22:59,626 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=61.5 pTM=0.531 ipTM=0.311 tol=4.31
2024-12-07 19:23:14,281 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=61.5 pTM=0.532 ipTM=0.328 tol=2.76
2024-12-07 19:23:28,919 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=61.3 pTM=0.533 ipTM=0.339 tol=2.01
2024-12-07 19:23:43,559 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=61.5 pTM=0.529 ipTM=0.323 tol=1.78
2024-12-07 19:23:58,202 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=61.4 pTM=0.534 ipTM=0.319 tol=1.69
2024-12-07 19:24:12,866 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=61.7 pTM=0.532 ipTM=0.309 tol=2.2
2024-12-07 19:24:27,521 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=61.6 pTM=0.535 ipTM=0.351 tol=1.99
2024-12-07 19:24:42,189 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=61.5 pTM=0.533 ipTM=0.348 tol=2.71
2024-12-07 19:24:56,811 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=60.9 pTM=0.533 ipTM=0.332 tol=2.53
2024-12-07 19:25:11,438 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=60.9 pTM=0.53 ipTM=0.321 tol=2.58
2024-12-07 19:25:26,077 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=60.8 pTM=0.532 ipTM=0.309 tol=2.88
2024-12-07 19:25:40,736 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=61 pTM=0.533 ipTM=0.326 tol=4.48
2024-12-07 19:25:55,386 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=61.1 pTM=0.532 ipTM=0.325 tol=4.7
2024-12-07 19:26:10,028 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=61.1 pTM=0.532 ipTM=0.324 tol=4.69
2024-12-07 19:26:24,663 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=61.1 pTM=0.532 ipTM=0.322 tol=5.23
2024-12-07 19:26:39,317 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=61.5 pTM=0.533 ipTM=0.319 tol=3.93
2024-12-07 19:26:39,318 alphafold2_multimer_v3_model_4_seed_000 took 454.2s (30 recycles)
2024-12-07 19:26:54,444 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=60.2 pTM=0.526 ipTM=0.192
2024-12-07 19:27:09,125 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=62 pTM=0.524 ipTM=0.18 tol=9.12
2024-12-07 19:27:23,863 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=62.3 pTM=0.523 ipTM=0.173 tol=4.74
2024-12-07 19:27:38,602 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=62.8 pTM=0.524 ipTM=0.167 tol=4.26
2024-12-07 19:27:53,331 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=62.2 pTM=0.524 ipTM=0.164 tol=2.57
2024-12-07 19:28:08,049 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=61.8 pTM=0.526 ipTM=0.176 tol=2.51
2024-12-07 19:28:22,796 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=61.9 pTM=0.525 ipTM=0.167 tol=2.43
2024-12-07 19:28:37,520 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=61.9 pTM=0.526 ipTM=0.168 tol=2.32
2024-12-07 19:28:52,241 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=61.8 pTM=0.526 ipTM=0.183 tol=2.2
2024-12-07 19:29:06,972 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=61.7 pTM=0.526 ipTM=0.173 tol=2.31
2024-12-07 19:29:21,703 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=61.6 pTM=0.526 ipTM=0.169 tol=1.39
2024-12-07 19:29:36,444 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=61.7 pTM=0.526 ipTM=0.164 tol=3.27
2024-12-07 19:29:51,173 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=61.9 pTM=0.527 ipTM=0.173 tol=3.21
2024-12-07 19:30:05,944 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=61.9 pTM=0.526 ipTM=0.166 tol=1.93
2024-12-07 19:30:20,673 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=62 pTM=0.526 ipTM=0.17 tol=1.78
2024-12-07 19:30:35,382 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=61.8 pTM=0.524 ipTM=0.161 tol=2.14
2024-12-07 19:30:50,107 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=61.8 pTM=0.526 ipTM=0.174 tol=2.71
2024-12-07 19:31:04,834 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=61.9 pTM=0.527 ipTM=0.173 tol=2.87
2024-12-07 19:31:19,542 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=61.6 pTM=0.525 ipTM=0.173 tol=2.25
2024-12-07 19:31:34,235 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=61.6 pTM=0.526 ipTM=0.17 tol=1.84
2024-12-07 19:31:48,953 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=61.6 pTM=0.525 ipTM=0.162 tol=3.45
2024-12-07 19:32:03,678 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=61.6 pTM=0.527 ipTM=0.17 tol=4.02
2024-12-07 19:32:18,414 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=62 pTM=0.525 ipTM=0.157 tol=2.97
2024-12-07 19:32:33,146 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=61.3 pTM=0.525 ipTM=0.162 tol=4.07
2024-12-07 19:32:47,886 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=62 pTM=0.527 ipTM=0.157 tol=4.84
2024-12-07 19:33:02,612 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=61.7 pTM=0.525 ipTM=0.157 tol=3.74
2024-12-07 19:33:17,355 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=61.7 pTM=0.526 ipTM=0.154 tol=3.34
2024-12-07 19:33:32,112 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=62.1 pTM=0.527 ipTM=0.165 tol=2.78
2024-12-07 19:33:46,833 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=62 pTM=0.528 ipTM=0.166 tol=3.1
2024-12-07 19:34:01,580 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=61.8 pTM=0.527 ipTM=0.155 tol=2.87
2024-12-07 19:34:16,318 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=61.6 pTM=0.527 ipTM=0.16 tol=1.87
2024-12-07 19:34:16,318 alphafold2_multimer_v3_model_5_seed_000 took 456.6s (30 recycles)
2024-12-07 19:34:16,759 reranking models by 'multimer' metric
2024-12-07 19:34:19,486 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-07 19:35:24,406 Relaxation took 67.6s
2024-12-07 19:35:24,406 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=61.5 pTM=0.533 ipTM=0.319
2024-12-07 19:36:30,206 Relaxation took 65.8s
2024-12-07 19:36:30,206 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=63.5 pTM=0.539 ipTM=0.207
2024-12-07 19:37:22,520 Relaxation took 52.3s
2024-12-07 19:37:22,520 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=62.5 pTM=0.525 ipTM=0.182
2024-12-07 19:38:26,176 Relaxation took 63.7s
2024-12-07 19:38:26,176 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=62.9 pTM=0.523 ipTM=0.165
2024-12-07 19:39:27,556 Relaxation took 61.4s
2024-12-07 19:39:27,556 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=61.6 pTM=0.527 ipTM=0.16
2024-12-07 19:39:29,062 Done