2024-12-07 19:06:37,299 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-07 19:06:37,669 Running on GPU
2024-12-07 19:06:39,946 Found 6 citations for tools or databases
2024-12-07 19:06:39,946 Query 1/1: RBBP7_PHF12 (length 1429)
2024-12-07 19:06:40,219 Sleeping for 8s. Reason: PENDING
2024-12-07 19:06:48,472 Sleeping for 9s. Reason: RUNNING
2024-12-07 19:06:57,732 Sleeping for 7s. Reason: RUNNING
2024-12-07 19:07:04,983 Sleeping for 10s. Reason: RUNNING
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2024-12-07 19:07:25,523 Sleeping for 6s. Reason: RUNNING
2024-12-07 19:07:31,779 Sleeping for 6s. Reason: RUNNING
2024-12-07 19:07:38,038 Sleeping for 7s. Reason: RUNNING
2024-12-07 19:07:45,293 Sleeping for 10s. Reason: RUNNING
2024-12-07 19:07:55,555 Sleeping for 7s. Reason: RUNNING
2024-12-07 19:08:02,817 Sleeping for 10s. Reason: RUNNING
2024-12-07 19:08:13,083 Sleeping for 7s. Reason: RUNNING
2024-12-07 19:08:20,341 Sleeping for 10s. Reason: RUNNING
2024-12-07 19:08:30,603 Sleeping for 7s. Reason: RUNNING
2024-12-07 19:08:37,861 Sleeping for 6s. Reason: RUNNING
2024-12-07 19:08:44,480 Sleeping for 10s. Reason: RUNNING
2024-12-07 19:08:54,750 Sleeping for 9s. Reason: RUNNING
2024-12-07 19:09:04,007 Sleeping for 10s. Reason: RUNNING
2024-12-07 19:09:14,273 Sleeping for 10s. Reason: RUNNING
2024-12-07 19:09:24,536 Sleeping for 8s. Reason: RUNNING
2024-12-07 19:09:32,796 Sleeping for 10s. Reason: RUNNING
2024-12-07 19:09:43,068 Sleeping for 7s. Reason: RUNNING
2024-12-07 19:09:50,333 Sleeping for 9s. Reason: RUNNING
2024-12-07 19:10:01,609 Sleeping for 8s. Reason: PENDING
2024-12-07 19:10:09,874 Sleeping for 5s. Reason: RUNNING
2024-12-07 19:10:15,136 Sleeping for 8s. Reason: RUNNING
2024-12-07 19:10:23,400 Sleeping for 8s. Reason: RUNNING
2024-12-07 19:10:31,669 Sleeping for 9s. Reason: RUNNING
2024-12-07 19:10:40,934 Sleeping for 8s. Reason: RUNNING
2024-12-07 19:10:49,191 Sleeping for 5s. Reason: RUNNING
2024-12-07 19:10:54,447 Sleeping for 9s. Reason: RUNNING
2024-12-07 19:11:03,707 Sleeping for 8s. Reason: RUNNING
2024-12-07 19:11:11,966 Sleeping for 9s. Reason: RUNNING
2024-12-07 19:11:21,220 Sleeping for 6s. Reason: RUNNING
2024-12-07 19:11:27,484 Sleeping for 5s. Reason: RUNNING
2024-12-07 19:11:33,100 Sleeping for 9s. Reason: RUNNING
2024-12-07 19:11:42,511 Sleeping for 10s. Reason: RUNNING
2024-12-07 19:11:59,813 Setting max_seq=508, max_extra_seq=2048
2024-12-07 19:16:35,483 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=46.4 pTM=0.399 ipTM=0.25
2024-12-07 19:17:32,991 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=48.1 pTM=0.396 ipTM=0.349 tol=24.2
2024-12-07 19:18:30,643 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=47.9 pTM=0.392 ipTM=0.251 tol=16.8
2024-12-07 19:19:28,378 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=48.7 pTM=0.392 ipTM=0.389 tol=11.1
2024-12-07 19:20:26,195 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=48.4 pTM=0.392 ipTM=0.362 tol=7.75
2024-12-07 19:21:24,049 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=48 pTM=0.389 ipTM=0.243 tol=3.53
2024-12-07 19:22:21,952 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=48.3 pTM=0.395 ipTM=0.436 tol=4.11
2024-12-07 19:23:19,896 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=48.3 pTM=0.39 ipTM=0.241 tol=3.75
2024-12-07 19:24:17,803 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=48.4 pTM=0.389 ipTM=0.25 tol=4.7
2024-12-07 19:25:15,702 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=48.2 pTM=0.389 ipTM=0.233 tol=3.88
2024-12-07 19:26:13,687 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=48.2 pTM=0.393 ipTM=0.407 tol=4.25
2024-12-07 19:27:11,704 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=48.3 pTM=0.388 ipTM=0.232 tol=2.94
2024-12-07 19:28:09,743 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=48.1 pTM=0.388 ipTM=0.266 tol=2.81
2024-12-07 19:29:07,740 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=48.2 pTM=0.387 ipTM=0.21 tol=3.16
2024-12-07 19:30:05,794 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=48.2 pTM=0.387 ipTM=0.216 tol=3.22
2024-12-07 19:31:03,853 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=48.1 pTM=0.391 ipTM=0.351 tol=2.61
2024-12-07 19:32:01,859 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=48 pTM=0.387 ipTM=0.23 tol=2.81
2024-12-07 19:32:59,781 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=48.1 pTM=0.388 ipTM=0.215 tol=3.81
2024-12-07 19:33:57,677 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=47.7 pTM=0.388 ipTM=0.206 tol=3.92
2024-12-07 19:34:55,479 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=48.1 pTM=0.393 ipTM=0.374 tol=4.57
2024-12-07 19:35:53,263 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=47.8 pTM=0.391 ipTM=0.246 tol=7.45
2024-12-07 19:36:51,076 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=48 pTM=0.39 ipTM=0.219 tol=4.52
2024-12-07 19:37:48,812 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=47.9 pTM=0.387 ipTM=0.216 tol=4.9
2024-12-07 19:38:46,553 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=48 pTM=0.39 ipTM=0.234 tol=2.76
2024-12-07 19:39:44,337 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=47.9 pTM=0.391 ipTM=0.283 tol=6.48
2024-12-07 19:40:42,271 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=48.4 pTM=0.391 ipTM=0.359 tol=5.43
2024-12-07 19:41:40,194 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=48.2 pTM=0.394 ipTM=0.469 tol=3.29
2024-12-07 19:42:38,147 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=47.9 pTM=0.388 ipTM=0.307 tol=5.15
2024-12-07 19:43:36,120 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=47.8 pTM=0.388 ipTM=0.215 tol=8
2024-12-07 19:44:34,086 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=48.2 pTM=0.39 ipTM=0.223 tol=5.42
2024-12-07 19:45:32,096 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=48 pTM=0.389 ipTM=0.296 tol=4.21
2024-12-07 19:45:32,097 alphafold2_multimer_v3_model_1_seed_000 took 2005.5s (30 recycles)
2024-12-07 19:46:31,537 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=47 pTM=0.399 ipTM=0.294
2024-12-07 19:47:29,520 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=49 pTM=0.382 ipTM=0.207 tol=15.4
2024-12-07 19:48:27,595 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=49.2 pTM=0.381 ipTM=0.207 tol=9.53
2024-12-07 19:49:25,744 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=49.1 pTM=0.382 ipTM=0.23 tol=7.9
2024-12-07 19:50:23,896 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=49.2 pTM=0.384 ipTM=0.292 tol=7.39
2024-12-07 19:51:21,967 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=48.9 pTM=0.382 ipTM=0.229 tol=8.09
2024-12-07 19:52:20,054 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=49.7 pTM=0.382 ipTM=0.272 tol=7.67
2024-12-07 19:53:18,175 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=49.7 pTM=0.381 ipTM=0.269 tol=5.4
2024-12-07 19:54:16,233 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=50 pTM=0.381 ipTM=0.203 tol=5.05
2024-12-07 19:55:14,288 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=50.4 pTM=0.383 ipTM=0.366 tol=6.06
2024-12-07 19:56:12,319 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=50.4 pTM=0.384 ipTM=0.317 tol=4.86
2024-12-07 19:57:10,342 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=50.3 pTM=0.379 ipTM=0.221 tol=5.03
2024-12-07 19:58:08,383 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=50.6 pTM=0.38 ipTM=0.298 tol=4.74
2024-12-07 19:59:06,559 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=50.6 pTM=0.378 ipTM=0.255 tol=4.15
2024-12-07 20:00:04,679 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=50.5 pTM=0.378 ipTM=0.212 tol=3.88
2024-12-07 20:01:02,779 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=50.4 pTM=0.385 ipTM=0.38 tol=5.78
2024-12-07 20:02:00,950 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=50.4 pTM=0.379 ipTM=0.234 tol=3.25
2024-12-07 20:02:59,141 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=50.7 pTM=0.377 ipTM=0.205 tol=3.95
2024-12-07 20:03:57,309 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=50.5 pTM=0.381 ipTM=0.41 tol=3.36
2024-12-07 20:04:55,432 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=50.4 pTM=0.377 ipTM=0.238 tol=2.25
2024-12-07 20:05:53,530 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=50.2 pTM=0.377 ipTM=0.203 tol=3.22
2024-12-07 20:06:51,693 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=50.3 pTM=0.38 ipTM=0.338 tol=2.93
2024-12-07 20:07:49,894 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=49.9 pTM=0.382 ipTM=0.281 tol=5.41
2024-12-07 20:08:48,060 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=50 pTM=0.378 ipTM=0.189 tol=3.66
2024-12-07 20:09:46,166 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=50.1 pTM=0.379 ipTM=0.267 tol=3.47
2024-12-07 20:10:44,232 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=50.2 pTM=0.378 ipTM=0.213 tol=3.7
2024-12-07 20:11:42,343 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=50.1 pTM=0.38 ipTM=0.253 tol=3.53
2024-12-07 20:12:40,444 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=50.1 pTM=0.378 ipTM=0.222 tol=4.41
2024-12-07 20:13:38,547 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=50.3 pTM=0.377 ipTM=0.201 tol=3.37
2024-12-07 20:14:36,587 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=50.2 pTM=0.379 ipTM=0.215 tol=3.93
2024-12-07 20:15:34,623 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=50.5 pTM=0.378 ipTM=0.215 tol=2.8
2024-12-07 20:15:34,625 alphafold2_multimer_v3_model_2_seed_000 took 1801.0s (30 recycles)
2024-12-07 20:16:34,370 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=46.7 pTM=0.398 ipTM=0.4
2024-12-07 20:17:32,656 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=47.4 pTM=0.385 ipTM=0.212 tol=16.9
2024-12-07 20:18:30,893 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=48 pTM=0.395 ipTM=0.245 tol=11.2
2024-12-07 20:19:29,134 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=48.4 pTM=0.389 ipTM=0.209 tol=10.9
2024-12-07 20:20:27,425 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=48 pTM=0.386 ipTM=0.215 tol=10.2
2024-12-07 20:21:25,695 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=47.8 pTM=0.384 ipTM=0.203 tol=7.24
2024-12-07 20:22:23,965 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=48 pTM=0.388 ipTM=0.219 tol=9.24
2024-12-07 20:23:22,242 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=48.2 pTM=0.384 ipTM=0.205 tol=9.49
2024-12-07 20:24:20,461 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=48.2 pTM=0.387 ipTM=0.215 tol=6.65
2024-12-07 20:25:18,742 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=48.2 pTM=0.384 ipTM=0.202 tol=4.96
2024-12-07 20:26:17,156 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=48.6 pTM=0.389 ipTM=0.241 tol=3.57
2024-12-07 20:27:15,557 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=48.6 pTM=0.384 ipTM=0.206 tol=4.51
2024-12-07 20:28:13,873 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=48.8 pTM=0.386 ipTM=0.218 tol=4.78
2024-12-07 20:29:12,195 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=48.5 pTM=0.382 ipTM=0.208 tol=4.81
2024-12-07 20:30:10,486 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=48.9 pTM=0.388 ipTM=0.23 tol=4.77
2024-12-07 20:31:08,769 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=48.5 pTM=0.384 ipTM=0.22 tol=4.56
2024-12-07 20:32:07,078 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=49 pTM=0.388 ipTM=0.255 tol=6.71
2024-12-07 20:33:05,420 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=48.7 pTM=0.383 ipTM=0.213 tol=6.25
2024-12-07 20:34:03,731 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=48.7 pTM=0.392 ipTM=0.259 tol=5.4
2024-12-07 20:35:02,010 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=48.6 pTM=0.384 ipTM=0.217 tol=5.48
2024-12-07 20:36:00,272 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=48.6 pTM=0.389 ipTM=0.247 tol=4.26
2024-12-07 20:36:58,528 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=48.7 pTM=0.382 ipTM=0.208 tol=4.72
2024-12-07 20:37:56,770 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=48.8 pTM=0.389 ipTM=0.235 tol=4.95
2024-12-07 20:38:55,074 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=48.7 pTM=0.383 ipTM=0.216 tol=7.33
2024-12-07 20:39:53,337 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=48.6 pTM=0.39 ipTM=0.274 tol=7.64
2024-12-07 20:40:51,563 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=48.8 pTM=0.383 ipTM=0.208 tol=5.59
2024-12-07 20:41:49,798 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=48.8 pTM=0.386 ipTM=0.24 tol=3.85
2024-12-07 20:42:48,102 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=48.4 pTM=0.382 ipTM=0.214 tol=3.89
2024-12-07 20:43:46,390 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=48.7 pTM=0.388 ipTM=0.236 tol=5.12
2024-12-07 20:44:44,662 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=47.6 pTM=0.383 ipTM=0.215 tol=22.8
2024-12-07 20:45:42,997 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=48.1 pTM=0.384 ipTM=0.223 tol=15.7
2024-12-07 20:45:42,999 alphafold2_multimer_v3_model_3_seed_000 took 1806.8s (30 recycles)
2024-12-07 20:46:42,875 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=46.1 pTM=0.381 ipTM=0.211
2024-12-07 20:47:41,263 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=47.5 pTM=0.38 ipTM=0.198 tol=20.4
2024-12-07 20:48:39,619 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=47.7 pTM=0.382 ipTM=0.379 tol=9.75
2024-12-07 20:49:37,960 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=47.7 pTM=0.379 ipTM=0.272 tol=14.2
2024-12-07 20:50:36,221 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=47.4 pTM=0.381 ipTM=0.281 tol=13.3
2024-12-07 20:51:34,471 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=47.2 pTM=0.382 ipTM=0.278 tol=11
2024-12-07 20:52:32,735 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=47.8 pTM=0.386 ipTM=0.37 tol=12.6
2024-12-07 20:53:31,034 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=47.9 pTM=0.38 ipTM=0.22 tol=10.4
2024-12-07 20:54:29,394 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=48.4 pTM=0.382 ipTM=0.26 tol=10.2
2024-12-07 20:55:27,783 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=48.2 pTM=0.377 ipTM=0.234 tol=9.24
2024-12-07 20:56:26,174 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=47.6 pTM=0.38 ipTM=0.236 tol=10.5
2024-12-07 20:57:24,605 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=47.7 pTM=0.377 ipTM=0.246 tol=10.7
2024-12-07 20:58:23,018 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=48 pTM=0.378 ipTM=0.218 tol=10.6
2024-12-07 20:59:21,382 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=48.1 pTM=0.376 ipTM=0.213 tol=8.52
2024-12-07 21:00:19,668 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=47.9 pTM=0.375 ipTM=0.182 tol=11.6
2024-12-07 21:01:17,998 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=47.8 pTM=0.375 ipTM=0.188 tol=11.1
2024-12-07 21:02:16,344 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=47.7 pTM=0.379 ipTM=0.357 tol=11
2024-12-07 21:03:14,715 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=47.6 pTM=0.38 ipTM=0.287 tol=12.5
2024-12-07 21:04:13,067 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=47.8 pTM=0.378 ipTM=0.212 tol=13.7
2024-12-07 21:05:11,427 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=47.8 pTM=0.376 ipTM=0.197 tol=11.8
2024-12-07 21:06:09,780 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=48 pTM=0.377 ipTM=0.206 tol=12.9
2024-12-07 21:07:08,121 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=48.2 pTM=0.376 ipTM=0.201 tol=14
2024-12-07 21:08:06,453 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=48.4 pTM=0.373 ipTM=0.179 tol=14.2
2024-12-07 21:09:04,755 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=47.8 pTM=0.376 ipTM=0.192 tol=13.1
2024-12-07 21:10:03,134 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=48.2 pTM=0.375 ipTM=0.198 tol=9.73
2024-12-07 21:11:01,486 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=48.2 pTM=0.375 ipTM=0.191 tol=9.66
2024-12-07 21:11:59,871 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=48.2 pTM=0.377 ipTM=0.209 tol=17.6
2024-12-07 21:12:58,159 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=47.6 pTM=0.376 ipTM=0.195 tol=13.7
2024-12-07 21:13:56,467 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=47.8 pTM=0.378 ipTM=0.219 tol=11
2024-12-07 21:14:54,809 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=47.9 pTM=0.376 ipTM=0.241 tol=14.8
2024-12-07 21:15:53,120 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=48.1 pTM=0.376 ipTM=0.241 tol=9.03
2024-12-07 21:15:53,121 alphafold2_multimer_v3_model_4_seed_000 took 1808.6s (30 recycles)
2024-12-07 21:16:52,855 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=45.6 pTM=0.385 ipTM=0.24
2024-12-07 21:17:51,133 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=47.7 pTM=0.38 ipTM=0.198 tol=18.8
2024-12-07 21:18:49,439 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=48.1 pTM=0.377 ipTM=0.187 tol=18.9
2024-12-07 21:19:47,711 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=48.7 pTM=0.377 ipTM=0.179 tol=13.6
2024-12-07 21:20:45,947 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=48.7 pTM=0.378 ipTM=0.183 tol=12.8
2024-12-07 21:21:44,244 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=48.7 pTM=0.377 ipTM=0.176 tol=14.4
2024-12-07 21:22:42,538 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=48.8 pTM=0.378 ipTM=0.187 tol=8.05
2024-12-07 21:23:40,815 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=49 pTM=0.378 ipTM=0.185 tol=6.06
2024-12-07 21:24:39,034 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=49.2 pTM=0.378 ipTM=0.182 tol=8.05
2024-12-07 21:25:37,332 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=49.5 pTM=0.378 ipTM=0.175 tol=8.78
2024-12-07 21:26:35,693 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=49.6 pTM=0.378 ipTM=0.177 tol=9.34
2024-12-07 21:27:34,029 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=49.8 pTM=0.38 ipTM=0.19 tol=7.46
2024-12-07 21:28:32,359 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=49.9 pTM=0.379 ipTM=0.177 tol=6.41
2024-12-07 21:29:30,717 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=49.8 pTM=0.378 ipTM=0.175 tol=5.95
2024-12-07 21:30:29,105 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=49.9 pTM=0.377 ipTM=0.174 tol=8.48
2024-12-07 21:31:27,429 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=49.8 pTM=0.377 ipTM=0.172 tol=7.86
2024-12-07 21:32:25,718 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=49.9 pTM=0.376 ipTM=0.172 tol=6.7
2024-12-07 21:33:23,999 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=49.9 pTM=0.376 ipTM=0.173 tol=4.19
2024-12-07 21:34:22,337 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=49.9 pTM=0.376 ipTM=0.173 tol=3.43
2024-12-07 21:35:20,660 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=49.7 pTM=0.376 ipTM=0.173 tol=7.7
2024-12-07 21:36:18,981 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=49.7 pTM=0.376 ipTM=0.18 tol=6.58
2024-12-07 21:37:17,348 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=49.8 pTM=0.378 ipTM=0.282 tol=6.84
2024-12-07 21:38:15,692 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=49.8 pTM=0.376 ipTM=0.174 tol=6.44
2024-12-07 21:39:14,092 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=49.8 pTM=0.375 ipTM=0.179 tol=9.27
2024-12-07 21:40:12,505 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=49.9 pTM=0.375 ipTM=0.175 tol=10.4
2024-12-07 21:41:10,869 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=50.2 pTM=0.376 ipTM=0.178 tol=3.84
2024-12-07 21:42:09,238 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=50.2 pTM=0.376 ipTM=0.182 tol=9.28
2024-12-07 21:43:07,615 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=50.1 pTM=0.375 ipTM=0.178 tol=8.39
2024-12-07 21:44:05,947 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=50 pTM=0.378 ipTM=0.245 tol=6.04
2024-12-07 21:45:04,295 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=50.2 pTM=0.375 ipTM=0.175 tol=4.23
2024-12-07 21:46:02,645 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=50.5 pTM=0.376 ipTM=0.184 tol=12.8
2024-12-07 21:46:02,646 alphafold2_multimer_v3_model_5_seed_000 took 1808.0s (30 recycles)
2024-12-07 21:46:04,191 reranking models by 'multimer' metric
2024-12-07 21:46:07,715 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-07 21:50:24,228 Relaxation took 260.0s
2024-12-07 21:50:24,228 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=48 pTM=0.389 ipTM=0.296
2024-12-07 21:55:06,734 Relaxation took 282.5s
2024-12-07 21:55:06,735 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=48.1 pTM=0.376 ipTM=0.241
2024-12-07 21:59:25,129 Relaxation took 258.4s
2024-12-07 21:59:25,129 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=48.1 pTM=0.384 ipTM=0.223
2024-12-07 22:04:20,674 Relaxation took 295.5s
2024-12-07 22:04:20,675 rank_004_alphafold2_multimer_v3_model_2_seed_000 pLDDT=50.5 pTM=0.378 ipTM=0.215
2024-12-07 22:07:51,683 Relaxation took 211.0s
2024-12-07 22:07:51,684 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=50.5 pTM=0.376 ipTM=0.184
2024-12-07 22:07:55,206 Done