2024-12-07 23:30:04,125 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-12-07 23:30:04,419 Running on GPU 2024-12-07 23:30:06,524 Found 6 citations for tools or databases 2024-12-07 23:30:06,524 Query 1/1: RICTOR_YWHAZ (length 1953) 2024-12-07 23:30:06,827 Sleeping for 10s. Reason: PENDING 2024-12-07 23:30:17,095 Sleeping for 7s. Reason: RUNNING 2024-12-07 23:30:24,351 Sleeping for 9s. Reason: RUNNING 2024-12-07 23:30:33,617 Sleeping for 8s. Reason: RUNNING 2024-12-07 23:30:41,874 Sleeping for 10s. Reason: RUNNING 2024-12-07 23:30:52,138 Sleeping for 7s. Reason: RUNNING 2024-12-07 23:30:59,393 Sleeping for 5s. Reason: RUNNING 2024-12-07 23:31:04,649 Sleeping for 5s. Reason: RUNNING 2024-12-07 23:31:09,904 Sleeping for 6s. Reason: RUNNING 2024-12-07 23:31:16,158 Sleeping for 9s. Reason: RUNNING 2024-12-07 23:31:25,416 Sleeping for 7s. Reason: RUNNING 2024-12-07 23:31:34,339 Sleeping for 7s. Reason: PENDING 2024-12-07 23:31:41,595 Sleeping for 5s. Reason: RUNNING 2024-12-07 23:31:46,848 Sleeping for 8s. Reason: RUNNING 2024-12-07 23:31:55,108 Sleeping for 8s. Reason: RUNNING 2024-12-07 23:32:03,374 Sleeping for 6s. Reason: RUNNING 2024-12-07 23:32:09,623 Sleeping for 8s. Reason: RUNNING 2024-12-07 23:32:17,889 Sleeping for 6s. Reason: RUNNING 2024-12-07 23:32:24,140 Sleeping for 9s. Reason: RUNNING 2024-12-07 23:32:33,400 Sleeping for 10s. Reason: RUNNING 2024-12-07 23:32:43,659 Sleeping for 5s. Reason: RUNNING 2024-12-07 23:32:48,914 Sleeping for 5s. Reason: RUNNING 2024-12-07 23:32:54,169 Sleeping for 7s. Reason: RUNNING 2024-12-07 23:33:11,939 Setting max_seq=508, max_extra_seq=2048 2024-12-07 23:38:41,138 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=64.2 pTM=0.622 ipTM=0.296 2024-12-07 23:41:10,950 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=65.4 pTM=0.619 ipTM=0.313 tol=17.6 2024-12-07 23:43:40,834 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=65.8 pTM=0.62 ipTM=0.302 tol=11.9 2024-12-07 23:46:10,660 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=65.7 pTM=0.622 ipTM=0.386 tol=6.18 2024-12-07 23:48:40,490 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=65.8 pTM=0.623 ipTM=0.465 tol=2.75 2024-12-07 23:51:10,301 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=66.1 pTM=0.62 ipTM=0.689 tol=3.66 2024-12-07 23:53:40,156 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=65.9 pTM=0.618 ipTM=0.745 tol=2.87 2024-12-07 23:56:10,059 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=66.2 pTM=0.617 ipTM=0.753 tol=3.77 2024-12-07 23:58:39,953 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=66.2 pTM=0.618 ipTM=0.748 tol=4.63 2024-12-08 00:01:09,790 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=66.3 pTM=0.619 ipTM=0.756 tol=3.13 2024-12-08 00:03:39,550 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=66.4 pTM=0.621 ipTM=0.756 tol=1.75 2024-12-08 00:06:09,372 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=66.1 pTM=0.619 ipTM=0.749 tol=2.78 2024-12-08 00:08:39,197 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=66.2 pTM=0.619 ipTM=0.753 tol=2.12 2024-12-08 00:11:09,072 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=66.2 pTM=0.62 ipTM=0.758 tol=2.1 2024-12-08 00:13:38,891 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=66.2 pTM=0.619 ipTM=0.756 tol=4.8 2024-12-08 00:16:08,693 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=66.1 pTM=0.619 ipTM=0.76 tol=8.31 2024-12-08 00:18:38,560 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=66.2 pTM=0.619 ipTM=0.759 tol=3.55 2024-12-08 00:21:08,451 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=66.3 pTM=0.622 ipTM=0.762 tol=5.44 2024-12-08 00:23:38,274 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=66.3 pTM=0.62 ipTM=0.755 tol=5.87 2024-12-08 00:26:08,166 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=66.2 pTM=0.619 ipTM=0.755 tol=3.66 2024-12-08 00:28:38,043 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=66.5 pTM=0.624 ipTM=0.763 tol=5.07 2024-12-08 00:31:07,866 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=66.5 pTM=0.622 ipTM=0.765 tol=6.37 2024-12-08 00:33:37,761 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=66.3 pTM=0.619 ipTM=0.76 tol=2.55 2024-12-08 00:36:07,696 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=66.4 pTM=0.622 ipTM=0.764 tol=8.34 2024-12-08 00:38:37,481 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=66.5 pTM=0.622 ipTM=0.761 tol=3.33 2024-12-08 00:41:07,448 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=66.2 pTM=0.618 ipTM=0.748 tol=6.66 2024-12-08 00:43:37,332 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=66.4 pTM=0.621 ipTM=0.752 tol=8.18 2024-12-08 00:46:07,089 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=66.5 pTM=0.625 ipTM=0.761 tol=3.8 2024-12-08 00:48:36,907 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=66.6 pTM=0.624 ipTM=0.77 tol=2.55 2024-12-08 00:51:06,698 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=66.3 pTM=0.619 ipTM=0.759 tol=4.23 2024-12-08 00:53:36,535 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=66.4 pTM=0.619 ipTM=0.767 tol=4.39 2024-12-08 00:53:36,538 alphafold2_multimer_v3_model_1_seed_000 took 4819.8s (30 recycles) 2024-12-08 00:56:08,804 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=64.4 pTM=0.633 ipTM=0.247 2024-12-08 00:58:38,861 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=65.2 pTM=0.64 ipTM=0.262 tol=12.2 2024-12-08 01:01:08,968 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=65.3 pTM=0.638 ipTM=0.27 tol=7.09 2024-12-08 01:03:39,111 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=65.4 pTM=0.637 ipTM=0.264 tol=5.52 2024-12-08 01:06:09,238 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=65.4 pTM=0.638 ipTM=0.272 tol=4.29 2024-12-08 01:08:39,421 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=65.4 pTM=0.636 ipTM=0.266 tol=3.95 2024-12-08 01:11:09,534 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=65.4 pTM=0.638 ipTM=0.279 tol=2.76 2024-12-08 01:13:39,722 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=65.6 pTM=0.638 ipTM=0.279 tol=3.55 2024-12-08 01:16:09,929 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=65.7 pTM=0.637 ipTM=0.272 tol=4.08 2024-12-08 01:18:40,110 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=65.7 pTM=0.638 ipTM=0.275 tol=4.25 2024-12-08 01:21:10,357 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=65.6 pTM=0.637 ipTM=0.273 tol=3.68 2024-12-08 01:23:40,513 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=65.6 pTM=0.637 ipTM=0.273 tol=3.71 2024-12-08 01:26:10,640 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=65.6 pTM=0.639 ipTM=0.284 tol=3.66 2024-12-08 01:28:40,740 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=65.6 pTM=0.639 ipTM=0.289 tol=3.02 2024-12-08 01:31:10,888 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=65.5 pTM=0.638 ipTM=0.287 tol=1.89 2024-12-08 01:33:41,044 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=65.6 pTM=0.641 ipTM=0.303 tol=2.45 2024-12-08 01:36:11,215 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=65.6 pTM=0.639 ipTM=0.297 tol=4.01 2024-12-08 01:38:41,351 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=65.4 pTM=0.639 ipTM=0.295 tol=3.6 2024-12-08 01:41:11,507 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=65.5 pTM=0.638 ipTM=0.295 tol=3.27 2024-12-08 01:43:41,576 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=65.4 pTM=0.64 ipTM=0.299 tol=2.94 2024-12-08 01:46:11,709 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=65.4 pTM=0.638 ipTM=0.293 tol=3.04 2024-12-08 01:48:41,884 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=65.5 pTM=0.638 ipTM=0.297 tol=2.98 2024-12-08 01:51:12,098 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=65.4 pTM=0.639 ipTM=0.304 tol=3.93 2024-12-08 01:53:42,237 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=65.4 pTM=0.638 ipTM=0.296 tol=3.35 2024-12-08 01:56:12,416 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=65.5 pTM=0.639 ipTM=0.301 tol=3.5 2024-12-08 01:58:42,619 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=65.4 pTM=0.64 ipTM=0.304 tol=3.09 2024-12-08 02:01:12,796 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=65.4 pTM=0.639 ipTM=0.305 tol=2.3 2024-12-08 02:03:42,830 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=65.5 pTM=0.64 ipTM=0.311 tol=3.73 2024-12-08 02:06:12,870 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=65.6 pTM=0.64 ipTM=0.304 tol=3.95 2024-12-08 02:08:42,893 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=65.4 pTM=0.638 ipTM=0.293 tol=4.71 2024-12-08 02:11:12,876 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=65.5 pTM=0.64 ipTM=0.301 tol=5.61 2024-12-08 02:11:12,879 alphafold2_multimer_v3_model_2_seed_000 took 4654.1s (30 recycles) 2024-12-08 02:13:45,229 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=65 pTM=0.621 ipTM=0.199 2024-12-08 02:16:15,306 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=65.6 pTM=0.625 ipTM=0.219 tol=15.3 2024-12-08 02:18:45,405 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=66 pTM=0.627 ipTM=0.238 tol=8.7 2024-12-08 02:21:15,579 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=65.9 pTM=0.623 ipTM=0.214 tol=4.94 2024-12-08 02:23:45,735 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=66 pTM=0.628 ipTM=0.234 tol=3.65 2024-12-08 02:26:15,956 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=65.9 pTM=0.625 ipTM=0.224 tol=2.48 2024-12-08 02:28:46,142 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=66.1 pTM=0.625 ipTM=0.225 tol=4.59 2024-12-08 02:31:16,377 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=66.1 pTM=0.627 ipTM=0.234 tol=6.45 2024-12-08 02:33:46,626 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=66.1 pTM=0.627 ipTM=0.242 tol=7.08 2024-12-08 02:36:16,843 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=66.2 pTM=0.627 ipTM=0.239 tol=5.25 2024-12-08 02:38:47,048 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=66.2 pTM=0.627 ipTM=0.232 tol=4.69 2024-12-08 02:41:17,281 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=66.2 pTM=0.628 ipTM=0.24 tol=2.77 2024-12-08 02:43:47,444 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=66.2 pTM=0.627 ipTM=0.235 tol=3.15 2024-12-08 02:46:17,680 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=66.2 pTM=0.628 ipTM=0.243 tol=4.81 2024-12-08 02:48:47,873 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=66.2 pTM=0.626 ipTM=0.24 tol=3.95 2024-12-08 02:51:17,984 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=66.2 pTM=0.629 ipTM=0.246 tol=2.27 2024-12-08 02:53:48,280 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=66.2 pTM=0.626 ipTM=0.238 tol=2.74 2024-12-08 02:56:18,518 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=66.1 pTM=0.625 ipTM=0.235 tol=2.34 2024-12-08 02:58:48,748 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=66.1 pTM=0.627 ipTM=0.23 tol=2.68 2024-12-08 03:01:18,990 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=66.2 pTM=0.627 ipTM=0.237 tol=2.71 2024-12-08 03:03:49,202 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=66.2 pTM=0.625 ipTM=0.236 tol=5.21 2024-12-08 03:06:19,436 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=66.1 pTM=0.627 ipTM=0.239 tol=6.71 2024-12-08 03:08:49,682 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=66.2 pTM=0.629 ipTM=0.252 tol=5.83 2024-12-08 03:11:19,921 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=66.2 pTM=0.629 ipTM=0.248 tol=8.8 2024-12-08 03:13:50,146 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=66.3 pTM=0.631 ipTM=0.254 tol=5.84 2024-12-08 03:16:20,375 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=66.1 pTM=0.629 ipTM=0.257 tol=5.49 2024-12-08 03:18:50,560 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=66.2 pTM=0.63 ipTM=0.263 tol=5.62 2024-12-08 03:21:20,822 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=66.2 pTM=0.631 ipTM=0.265 tol=4.64 2024-12-08 03:23:51,043 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=66.4 pTM=0.63 ipTM=0.259 tol=2.68 2024-12-08 03:26:21,380 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=66.2 pTM=0.629 ipTM=0.258 tol=4.74 2024-12-08 03:28:51,728 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=66.2 pTM=0.629 ipTM=0.257 tol=3.51 2024-12-08 03:28:51,730 alphafold2_multimer_v3_model_3_seed_000 took 4656.7s (30 recycles) 2024-12-08 03:31:24,199 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=63.7 pTM=0.62 ipTM=0.197 2024-12-08 03:33:54,401 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=64.3 pTM=0.625 ipTM=0.274 tol=14.1 2024-12-08 03:36:24,594 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=65 pTM=0.625 ipTM=0.302 tol=15.3 2024-12-08 03:38:54,737 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=64.7 pTM=0.625 ipTM=0.272 tol=8.27 2024-12-08 03:41:24,851 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=64.8 pTM=0.624 ipTM=0.259 tol=4.04 2024-12-08 03:43:55,062 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=64.8 pTM=0.623 ipTM=0.326 tol=5.9 2024-12-08 03:46:25,265 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=65 pTM=0.622 ipTM=0.513 tol=6.79 2024-12-08 03:48:55,410 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=64.9 pTM=0.622 ipTM=0.374 tol=3.59 2024-12-08 03:51:25,554 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=64.9 pTM=0.621 ipTM=0.3 tol=3.39 2024-12-08 03:53:55,725 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=64.8 pTM=0.622 ipTM=0.335 tol=2.5 2024-12-08 03:56:25,863 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=64.8 pTM=0.623 ipTM=0.393 tol=3.53 2024-12-08 03:58:55,893 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=64.8 pTM=0.624 ipTM=0.337 tol=2.67 2024-12-08 04:01:25,899 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=64.6 pTM=0.624 ipTM=0.264 tol=3.63 2024-12-08 04:03:56,043 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=64.6 pTM=0.623 ipTM=0.259 tol=3.72 2024-12-08 04:06:26,201 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=64.6 pTM=0.622 ipTM=0.257 tol=2.7 2024-12-08 04:08:56,377 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=64.6 pTM=0.623 ipTM=0.277 tol=4.52 2024-12-08 04:11:26,564 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=64.5 pTM=0.621 ipTM=0.266 tol=4.59 2024-12-08 04:13:56,737 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=64.5 pTM=0.621 ipTM=0.285 tol=2.92 2024-12-08 04:16:26,889 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=64.3 pTM=0.621 ipTM=0.263 tol=3.28 2024-12-08 04:18:57,102 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=64.6 pTM=0.621 ipTM=0.273 tol=2.89 2024-12-08 04:21:27,252 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=64.6 pTM=0.62 ipTM=0.253 tol=4.26 2024-12-08 04:23:57,417 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=64.6 pTM=0.621 ipTM=0.289 tol=2.84 2024-12-08 04:26:27,519 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=64.5 pTM=0.621 ipTM=0.301 tol=1.98 2024-12-08 04:28:57,526 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=64.7 pTM=0.62 ipTM=0.504 tol=5 2024-12-08 04:31:27,534 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=65 pTM=0.624 ipTM=0.521 tol=6.54 2024-12-08 04:33:57,551 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=64.8 pTM=0.624 ipTM=0.432 tol=2.68 2024-12-08 04:36:27,537 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=64.6 pTM=0.624 ipTM=0.308 tol=2.17 2024-12-08 04:38:57,538 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=64.6 pTM=0.623 ipTM=0.275 tol=2.19 2024-12-08 04:41:27,528 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=64.7 pTM=0.623 ipTM=0.279 tol=2.21 2024-12-08 04:43:57,533 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=64.8 pTM=0.623 ipTM=0.285 tol=4.12 2024-12-08 04:46:27,559 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=64.8 pTM=0.624 ipTM=0.349 tol=4.97 2024-12-08 04:46:27,561 alphafold2_multimer_v3_model_4_seed_000 took 4653.6s (30 recycles) 2024-12-08 04:48:59,989 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=65.1 pTM=0.63 ipTM=0.209 2024-12-08 04:51:30,230 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=65.9 pTM=0.632 ipTM=0.213 tol=13.6 2024-12-08 04:54:00,400 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=66.1 pTM=0.631 ipTM=0.195 tol=7.43 2024-12-08 04:56:30,566 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=66.1 pTM=0.633 ipTM=0.208 tol=5.73 2024-12-08 04:59:00,821 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=66.3 pTM=0.634 ipTM=0.2 tol=5.56 2024-12-08 05:01:30,974 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=66.4 pTM=0.633 ipTM=0.2 tol=4.96 2024-12-08 05:04:01,142 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=66.5 pTM=0.633 ipTM=0.204 tol=5.79 2024-12-08 05:06:31,250 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=66.4 pTM=0.634 ipTM=0.202 tol=2.74 2024-12-08 05:09:01,441 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=66.6 pTM=0.633 ipTM=0.203 tol=2.7 2024-12-08 05:11:31,618 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=66.6 pTM=0.635 ipTM=0.201 tol=2.42 2024-12-08 05:14:01,826 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=66.6 pTM=0.634 ipTM=0.2 tol=5.14 2024-12-08 05:16:32,028 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=66.6 pTM=0.634 ipTM=0.203 tol=2.59 2024-12-08 05:19:02,197 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=66.6 pTM=0.633 ipTM=0.201 tol=4.02 2024-12-08 05:21:32,375 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=66.7 pTM=0.634 ipTM=0.198 tol=2.22 2024-12-08 05:24:02,528 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=66.6 pTM=0.633 ipTM=0.201 tol=4.57 2024-12-08 05:26:32,740 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=66.6 pTM=0.633 ipTM=0.201 tol=2.45 2024-12-08 05:29:02,964 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=66.5 pTM=0.632 ipTM=0.198 tol=4.35 2024-12-08 05:31:33,155 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=66.5 pTM=0.631 ipTM=0.194 tol=2.62 2024-12-08 05:34:03,275 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=66.6 pTM=0.633 ipTM=0.198 tol=1.82 2024-12-08 05:36:33,364 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=66.6 pTM=0.634 ipTM=0.201 tol=3.72 2024-12-08 05:39:03,560 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=66.5 pTM=0.633 ipTM=0.198 tol=5.6 2024-12-08 05:41:33,708 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=66.6 pTM=0.634 ipTM=0.197 tol=5.32 2024-12-08 05:44:03,868 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=66.6 pTM=0.633 ipTM=0.199 tol=4.21 2024-12-08 05:46:34,011 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=66.6 pTM=0.634 ipTM=0.201 tol=2.41 2024-12-08 05:49:04,157 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=66.7 pTM=0.635 ipTM=0.205 tol=4.31 2024-12-08 05:51:34,310 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=66.5 pTM=0.633 ipTM=0.204 tol=1.69 2024-12-08 05:54:04,418 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=66.6 pTM=0.634 ipTM=0.21 tol=4.88 2024-12-08 05:56:34,488 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=66.5 pTM=0.634 ipTM=0.208 tol=3.06 2024-12-08 05:59:04,674 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=66.6 pTM=0.633 ipTM=0.204 tol=4.46 2024-12-08 06:01:34,848 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=66.6 pTM=0.633 ipTM=0.205 tol=2.27 2024-12-08 06:04:05,020 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=66.6 pTM=0.633 ipTM=0.203 tol=1.62 2024-12-08 06:04:05,022 alphafold2_multimer_v3_model_5_seed_000 took 4655.3s (30 recycles) 2024-12-08 06:04:07,210 reranking models by 'multimer' metric 2024-12-08 06:04:10,688 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-12-08 06:09:35,398 Relaxation took 328.2s 2024-12-08 06:09:35,399 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=66.4 pTM=0.619 ipTM=0.767 2024-12-08 06:16:30,364 Relaxation took 415.0s 2024-12-08 06:16:30,364 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=64.8 pTM=0.624 ipTM=0.349 2024-12-08 06:21:51,548 Relaxation took 321.2s 2024-12-08 06:21:51,548 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=65.5 pTM=0.64 ipTM=0.301 2024-12-08 06:25:30,312 Relaxation took 218.8s 2024-12-08 06:25:30,312 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=66.2 pTM=0.629 ipTM=0.257 2024-12-08 06:29:13,448 Relaxation took 223.1s 2024-12-08 06:29:13,448 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=66.6 pTM=0.633 ipTM=0.203 2024-12-08 06:29:18,385 Done