2024-12-07 23:56:08,233 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-07 23:56:08,552 Running on GPU
2024-12-07 23:56:12,617 Found 6 citations for tools or databases
2024-12-07 23:56:12,617 Query 1/1: RLIM_DNAJB2 (length 948)
2024-12-07 23:56:12,943 Sleeping for 10s. Reason: PENDING
2024-12-07 23:56:23,201 Sleeping for 5s. Reason: RUNNING
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2024-12-07 23:57:01,740 Sleeping for 7s. Reason: RUNNING
2024-12-07 23:57:08,994 Sleeping for 7s. Reason: RUNNING
2024-12-07 23:57:16,251 Sleeping for 7s. Reason: RUNNING
2024-12-07 23:57:23,511 Sleeping for 10s. Reason: RUNNING
2024-12-07 23:57:33,773 Sleeping for 5s. Reason: RUNNING
2024-12-07 23:57:39,032 Sleeping for 6s. Reason: RUNNING
2024-12-07 23:57:45,290 Sleeping for 10s. Reason: RUNNING
2024-12-07 23:57:55,554 Sleeping for 7s. Reason: RUNNING
2024-12-07 23:58:02,827 Sleeping for 5s. Reason: RUNNING
2024-12-07 23:58:08,091 Sleeping for 7s. Reason: RUNNING
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2024-12-07 23:58:31,876 Sleeping for 7s. Reason: RUNNING
2024-12-07 23:58:39,133 Sleeping for 10s. Reason: RUNNING
2024-12-07 23:58:49,395 Sleeping for 10s. Reason: RUNNING
2024-12-07 23:58:59,649 Sleeping for 7s. Reason: RUNNING
2024-12-07 23:59:08,980 Sleeping for 9s. Reason: PENDING
2024-12-07 23:59:18,239 Sleeping for 7s. Reason: RUNNING
2024-12-07 23:59:25,497 Sleeping for 5s. Reason: RUNNING
2024-12-07 23:59:30,749 Sleeping for 10s. Reason: RUNNING
2024-12-07 23:59:41,013 Sleeping for 8s. Reason: RUNNING
2024-12-07 23:59:49,270 Sleeping for 10s. Reason: RUNNING
2024-12-07 23:59:59,535 Sleeping for 7s. Reason: RUNNING
2024-12-08 00:00:06,798 Sleeping for 8s. Reason: RUNNING
2024-12-08 00:00:19,928 Setting max_seq=508, max_extra_seq=2048
2024-12-08 00:02:44,664 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=36.1 pTM=0.271 ipTM=0.203
2024-12-08 00:03:04,020 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=36.2 pTM=0.274 ipTM=0.181 tol=18.4
2024-12-08 00:03:23,448 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=36.7 pTM=0.264 ipTM=0.162 tol=13.5
2024-12-08 00:03:42,906 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=36.7 pTM=0.253 ipTM=0.156 tol=9.21
2024-12-08 00:04:02,435 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=36.7 pTM=0.248 ipTM=0.168 tol=9.59
2024-12-08 00:04:21,972 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=37.2 pTM=0.248 ipTM=0.196 tol=11.8
2024-12-08 00:04:41,531 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=37.2 pTM=0.246 ipTM=0.182 tol=6.38
2024-12-08 00:05:01,101 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=37.2 pTM=0.246 ipTM=0.182 tol=4.27
2024-12-08 00:05:20,659 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=37.3 pTM=0.246 ipTM=0.184 tol=3.05
2024-12-08 00:05:40,233 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=37.3 pTM=0.243 ipTM=0.186 tol=3.91
2024-12-08 00:05:59,816 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=37.3 pTM=0.243 ipTM=0.18 tol=2.63
2024-12-08 00:06:19,391 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=37.3 pTM=0.242 ipTM=0.174 tol=2.94
2024-12-08 00:06:38,980 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=37.3 pTM=0.24 ipTM=0.178 tol=2.19
2024-12-08 00:06:58,565 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=37.4 pTM=0.24 ipTM=0.172 tol=2.39
2024-12-08 00:07:18,161 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=37.5 pTM=0.244 ipTM=0.175 tol=4.02
2024-12-08 00:07:37,745 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=37.4 pTM=0.246 ipTM=0.186 tol=5.88
2024-12-08 00:07:57,342 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=38.1 pTM=0.256 ipTM=0.206 tol=6.23
2024-12-08 00:08:16,913 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=37.7 pTM=0.245 ipTM=0.189 tol=5.14
2024-12-08 00:08:36,485 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=38.1 pTM=0.244 ipTM=0.178 tol=5.52
2024-12-08 00:08:56,059 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=39 pTM=0.243 ipTM=0.176 tol=3.43
2024-12-08 00:09:15,629 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=39.1 pTM=0.243 ipTM=0.178 tol=5.64
2024-12-08 00:09:35,202 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=39.2 pTM=0.242 ipTM=0.173 tol=6.23
2024-12-08 00:09:54,777 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=39.5 pTM=0.244 ipTM=0.171 tol=2.94
2024-12-08 00:10:14,353 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=39.3 pTM=0.241 ipTM=0.176 tol=2.62
2024-12-08 00:10:33,928 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=39.6 pTM=0.245 ipTM=0.194 tol=4.56
2024-12-08 00:10:53,495 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=39.4 pTM=0.242 ipTM=0.177 tol=5.32
2024-12-08 00:11:13,055 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=39.6 pTM=0.242 ipTM=0.171 tol=3.8
2024-12-08 00:11:32,626 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=39.4 pTM=0.242 ipTM=0.17 tol=4.68
2024-12-08 00:11:52,202 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=39.4 pTM=0.241 ipTM=0.171 tol=6.22
2024-12-08 00:12:11,774 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=39.7 pTM=0.243 ipTM=0.172 tol=4.35
2024-12-08 00:12:31,342 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=39.6 pTM=0.247 ipTM=0.184 tol=8.48
2024-12-08 00:12:31,343 alphafold2_multimer_v3_model_1_seed_000 took 726.3s (30 recycles)
2024-12-08 00:12:51,373 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=35.9 pTM=0.259 ipTM=0.155
2024-12-08 00:13:10,868 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=37.7 pTM=0.255 ipTM=0.144 tol=15.6
2024-12-08 00:13:30,383 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=39.8 pTM=0.243 ipTM=0.155 tol=14.7
2024-12-08 00:13:49,896 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=40.4 pTM=0.248 ipTM=0.164 tol=13.3
2024-12-08 00:14:09,423 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=40.9 pTM=0.246 ipTM=0.165 tol=10.8
2024-12-08 00:14:28,943 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=40.8 pTM=0.241 ipTM=0.163 tol=11
2024-12-08 00:14:48,468 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=40.8 pTM=0.245 ipTM=0.167 tol=4.62
2024-12-08 00:15:07,989 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=40.6 pTM=0.243 ipTM=0.167 tol=3.99
2024-12-08 00:15:27,500 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=40.8 pTM=0.243 ipTM=0.168 tol=3.04
2024-12-08 00:15:47,030 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=40.8 pTM=0.243 ipTM=0.167 tol=7.96
2024-12-08 00:16:06,543 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=40.9 pTM=0.245 ipTM=0.166 tol=7.79
2024-12-08 00:16:26,073 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=41.1 pTM=0.244 ipTM=0.167 tol=8.48
2024-12-08 00:16:45,584 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=41 pTM=0.244 ipTM=0.171 tol=3.62
2024-12-08 00:17:05,093 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=41.1 pTM=0.248 ipTM=0.173 tol=3.97
2024-12-08 00:17:24,586 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=41.5 pTM=0.25 ipTM=0.174 tol=4.26
2024-12-08 00:17:44,077 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=41.5 pTM=0.255 ipTM=0.176 tol=3.59
2024-12-08 00:18:03,577 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=41.8 pTM=0.257 ipTM=0.177 tol=3.73
2024-12-08 00:18:23,071 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=41.6 pTM=0.254 ipTM=0.177 tol=2.98
2024-12-08 00:18:42,562 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=41.9 pTM=0.256 ipTM=0.181 tol=3.12
2024-12-08 00:19:02,066 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=41.8 pTM=0.258 ipTM=0.18 tol=3.85
2024-12-08 00:19:21,561 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=41.9 pTM=0.258 ipTM=0.18 tol=4.97
2024-12-08 00:19:41,075 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=41.9 pTM=0.257 ipTM=0.178 tol=4.45
2024-12-08 00:20:00,554 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=42.2 pTM=0.256 ipTM=0.179 tol=3.83
2024-12-08 00:20:20,030 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=41.9 pTM=0.258 ipTM=0.182 tol=2.34
2024-12-08 00:20:39,528 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=42.1 pTM=0.259 ipTM=0.184 tol=2.71
2024-12-08 00:20:59,003 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=42.2 pTM=0.26 ipTM=0.185 tol=2.77
2024-12-08 00:21:18,488 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=42.1 pTM=0.261 ipTM=0.19 tol=2.42
2024-12-08 00:21:37,973 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=42.1 pTM=0.264 ipTM=0.194 tol=4.26
2024-12-08 00:21:57,467 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=42.2 pTM=0.264 ipTM=0.194 tol=2.49
2024-12-08 00:22:16,966 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=42.1 pTM=0.263 ipTM=0.195 tol=2.77
2024-12-08 00:22:36,437 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=42.3 pTM=0.265 ipTM=0.195 tol=2.02
2024-12-08 00:22:36,438 alphafold2_multimer_v3_model_2_seed_000 took 604.5s (30 recycles)
2024-12-08 00:22:56,681 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=35.5 pTM=0.222 ipTM=0.177
2024-12-08 00:23:16,309 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=33.4 pTM=0.248 ipTM=0.161 tol=24.4
2024-12-08 00:23:35,966 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=35.5 pTM=0.24 ipTM=0.156 tol=13.7
2024-12-08 00:23:55,588 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=37.6 pTM=0.266 ipTM=0.208 tol=13.9
2024-12-08 00:24:15,196 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=38.1 pTM=0.278 ipTM=0.195 tol=11.9
2024-12-08 00:24:34,800 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=39 pTM=0.293 ipTM=0.199 tol=6.95
2024-12-08 00:24:54,382 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=39.6 pTM=0.3 ipTM=0.209 tol=5.12
2024-12-08 00:25:13,938 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=40.7 pTM=0.326 ipTM=0.273 tol=7.33
2024-12-08 00:25:33,512 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=40.8 pTM=0.318 ipTM=0.252 tol=4.75
2024-12-08 00:25:53,067 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=41.6 pTM=0.332 ipTM=0.295 tol=4.11
2024-12-08 00:26:12,614 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=41.2 pTM=0.319 ipTM=0.255 tol=5.14
2024-12-08 00:26:32,159 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=41.8 pTM=0.331 ipTM=0.283 tol=4.2
2024-12-08 00:26:51,687 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=42.5 pTM=0.354 ipTM=0.347 tol=2.8
2024-12-08 00:27:11,200 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=42.3 pTM=0.348 ipTM=0.332 tol=3.69
2024-12-08 00:27:30,725 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=42.4 pTM=0.346 ipTM=0.332 tol=3.03
2024-12-08 00:27:50,236 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=41.8 pTM=0.339 ipTM=0.308 tol=3.11
2024-12-08 00:28:09,747 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=42.2 pTM=0.341 ipTM=0.315 tol=1.86
2024-12-08 00:28:29,265 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=42.1 pTM=0.341 ipTM=0.31 tol=1.73
2024-12-08 00:28:48,764 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=41.7 pTM=0.333 ipTM=0.294 tol=1.99
2024-12-08 00:29:08,249 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=42.8 pTM=0.35 ipTM=0.339 tol=2.77
2024-12-08 00:29:27,739 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=43.1 pTM=0.359 ipTM=0.365 tol=2.15
2024-12-08 00:29:47,226 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=42.6 pTM=0.343 ipTM=0.321 tol=2.16
2024-12-08 00:30:06,718 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=42.9 pTM=0.346 ipTM=0.332 tol=2.05
2024-12-08 00:30:26,200 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=42.3 pTM=0.339 ipTM=0.314 tol=1.72
2024-12-08 00:30:45,684 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=42.7 pTM=0.346 ipTM=0.336 tol=2.33
2024-12-08 00:31:05,164 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=42.7 pTM=0.343 ipTM=0.325 tol=2.7
2024-12-08 00:31:24,636 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=42.8 pTM=0.348 ipTM=0.339 tol=4.7
2024-12-08 00:31:44,098 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=43 pTM=0.349 ipTM=0.343 tol=5.23
2024-12-08 00:32:03,554 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=43.4 pTM=0.356 ipTM=0.362 tol=5.29
2024-12-08 00:32:23,040 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=43 pTM=0.357 ipTM=0.361 tol=5.25
2024-12-08 00:32:42,514 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=44.2 pTM=0.378 ipTM=0.415 tol=4.7
2024-12-08 00:32:42,515 alphafold2_multimer_v3_model_3_seed_000 took 605.5s (30 recycles)
2024-12-08 00:33:02,654 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=36.7 pTM=0.278 ipTM=0.208
2024-12-08 00:33:22,201 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=36.2 pTM=0.282 ipTM=0.186 tol=16.6
2024-12-08 00:33:41,768 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=35.5 pTM=0.291 ipTM=0.202 tol=10.1
2024-12-08 00:34:01,358 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=36.6 pTM=0.285 ipTM=0.182 tol=6.55
2024-12-08 00:34:20,954 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=36.5 pTM=0.284 ipTM=0.181 tol=4.96
2024-12-08 00:34:40,566 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=36.7 pTM=0.28 ipTM=0.182 tol=6.93
2024-12-08 00:35:00,198 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=36.8 pTM=0.282 ipTM=0.181 tol=6.35
2024-12-08 00:35:19,835 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=36.7 pTM=0.278 ipTM=0.178 tol=6.95
2024-12-08 00:35:39,473 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=36.6 pTM=0.281 ipTM=0.183 tol=3.65
2024-12-08 00:35:59,112 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=37 pTM=0.28 ipTM=0.182 tol=6.18
2024-12-08 00:36:18,741 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=36.8 pTM=0.28 ipTM=0.176 tol=5.09
2024-12-08 00:36:38,387 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=36.9 pTM=0.275 ipTM=0.174 tol=5.31
2024-12-08 00:36:58,036 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=36.7 pTM=0.276 ipTM=0.178 tol=4.12
2024-12-08 00:37:17,665 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=36.8 pTM=0.274 ipTM=0.18 tol=2.25
2024-12-08 00:37:37,284 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=36.7 pTM=0.276 ipTM=0.176 tol=4.9
2024-12-08 00:37:56,915 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=36.8 pTM=0.278 ipTM=0.177 tol=4.09
2024-12-08 00:38:16,531 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=35.9 pTM=0.282 ipTM=0.181 tol=12.6
2024-12-08 00:38:36,175 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=37 pTM=0.279 ipTM=0.179 tol=11.9
2024-12-08 00:38:55,800 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=36.7 pTM=0.277 ipTM=0.177 tol=3.23
2024-12-08 00:39:15,444 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=36.6 pTM=0.281 ipTM=0.179 tol=2.92
2024-12-08 00:39:35,098 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=36.6 pTM=0.283 ipTM=0.186 tol=2.53
2024-12-08 00:39:54,736 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=36.6 pTM=0.283 ipTM=0.184 tol=2.76
2024-12-08 00:40:14,398 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=36.3 pTM=0.282 ipTM=0.186 tol=3.82
2024-12-08 00:40:34,055 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=36.6 pTM=0.278 ipTM=0.18 tol=3.51
2024-12-08 00:40:53,710 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=36.1 pTM=0.284 ipTM=0.192 tol=4.25
2024-12-08 00:41:13,354 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=36.8 pTM=0.284 ipTM=0.185 tol=3.8
2024-12-08 00:41:32,982 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=36.9 pTM=0.281 ipTM=0.18 tol=3.74
2024-12-08 00:41:52,617 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=36.8 pTM=0.281 ipTM=0.183 tol=2.87
2024-12-08 00:42:12,243 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=36.8 pTM=0.284 ipTM=0.184 tol=5
2024-12-08 00:42:31,891 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=36.8 pTM=0.281 ipTM=0.182 tol=4.72
2024-12-08 00:42:51,516 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=36.8 pTM=0.284 ipTM=0.186 tol=2.94
2024-12-08 00:42:51,517 alphafold2_multimer_v3_model_4_seed_000 took 608.4s (30 recycles)
2024-12-08 00:43:11,753 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=37.2 pTM=0.269 ipTM=0.198
2024-12-08 00:43:31,401 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=40 pTM=0.275 ipTM=0.18 tol=19
2024-12-08 00:43:51,008 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=40.4 pTM=0.311 ipTM=0.252 tol=10.6
2024-12-08 00:44:10,609 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=42.2 pTM=0.336 ipTM=0.304 tol=5.36
2024-12-08 00:44:30,220 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=41.7 pTM=0.326 ipTM=0.274 tol=4.29
2024-12-08 00:44:49,829 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=42.1 pTM=0.325 ipTM=0.281 tol=6.13
2024-12-08 00:45:09,420 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=42.6 pTM=0.332 ipTM=0.29 tol=5.35
2024-12-08 00:45:28,989 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=42.4 pTM=0.335 ipTM=0.301 tol=7.45
2024-12-08 00:45:48,576 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=42.6 pTM=0.334 ipTM=0.301 tol=6.2
2024-12-08 00:46:08,143 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=42.4 pTM=0.339 ipTM=0.314 tol=6.51
2024-12-08 00:46:27,724 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=43.1 pTM=0.335 ipTM=0.303 tol=5.08
2024-12-08 00:46:47,309 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=43.3 pTM=0.346 ipTM=0.329 tol=4.29
2024-12-08 00:47:06,875 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=43.3 pTM=0.349 ipTM=0.336 tol=4.26
2024-12-08 00:47:26,445 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=43.4 pTM=0.35 ipTM=0.343 tol=3.07
2024-12-08 00:47:46,021 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=43.1 pTM=0.345 ipTM=0.326 tol=8.11
2024-12-08 00:48:05,591 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=42.9 pTM=0.34 ipTM=0.316 tol=5.18
2024-12-08 00:48:25,169 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=43 pTM=0.341 ipTM=0.316 tol=6.15
2024-12-08 00:48:44,747 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=42.7 pTM=0.336 ipTM=0.303 tol=4.16
2024-12-08 00:49:04,330 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=42.8 pTM=0.333 ipTM=0.296 tol=6.95
2024-12-08 00:49:23,896 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=42.5 pTM=0.335 ipTM=0.305 tol=3.3
2024-12-08 00:49:43,467 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=43 pTM=0.34 ipTM=0.31 tol=5.21
2024-12-08 00:50:03,028 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=42.9 pTM=0.345 ipTM=0.33 tol=3.27
2024-12-08 00:50:22,591 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=42.9 pTM=0.339 ipTM=0.311 tol=5.53
2024-12-08 00:50:42,160 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=42.7 pTM=0.338 ipTM=0.312 tol=6.12
2024-12-08 00:51:01,727 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=42.6 pTM=0.333 ipTM=0.3 tol=6.02
2024-12-08 00:51:21,281 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=42.5 pTM=0.336 ipTM=0.304 tol=5.54
2024-12-08 00:51:40,840 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=43 pTM=0.338 ipTM=0.31 tol=2.71
2024-12-08 00:52:00,399 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=42.7 pTM=0.339 ipTM=0.314 tol=8.38
2024-12-08 00:52:19,973 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=42.9 pTM=0.335 ipTM=0.304 tol=7.96
2024-12-08 00:52:39,532 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=43.1 pTM=0.348 ipTM=0.34 tol=3.14
2024-12-08 00:52:59,096 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=42.6 pTM=0.339 ipTM=0.318 tol=1.61
2024-12-08 00:52:59,097 alphafold2_multimer_v3_model_5_seed_000 took 607.0s (30 recycles)
2024-12-08 00:52:59,659 reranking models by 'multimer' metric
2024-12-08 00:53:02,231 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-08 00:54:17,242 Relaxation took 77.6s
2024-12-08 00:54:17,242 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=44.2 pTM=0.378 ipTM=0.415
2024-12-08 00:55:29,658 Relaxation took 72.4s
2024-12-08 00:55:29,658 rank_002_alphafold2_multimer_v3_model_5_seed_000 pLDDT=42.6 pTM=0.339 ipTM=0.318
2024-12-08 00:57:25,393 Relaxation took 115.7s
2024-12-08 00:57:25,393 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=42.3 pTM=0.265 ipTM=0.195
2024-12-08 00:58:56,746 Relaxation took 91.4s
2024-12-08 00:58:56,746 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=36.8 pTM=0.284 ipTM=0.186
2024-12-08 01:00:10,868 Relaxation took 74.1s
2024-12-08 01:00:10,868 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=39.6 pTM=0.247 ipTM=0.184
2024-12-08 01:00:12,549 Done