2024-12-07 23:58:18,017 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-07 23:58:18,322 Running on GPU
2024-12-07 23:58:20,982 Found 6 citations for tools or databases
2024-12-07 23:58:20,982 Query 1/1: RMND5B_EMILIN3 (length 1342)
2024-12-07 23:58:21,264 Sleeping for 5s. Reason: PENDING
2024-12-07 23:58:26,525 Sleeping for 9s. Reason: RUNNING
2024-12-07 23:58:35,784 Sleeping for 5s. Reason: RUNNING
2024-12-07 23:58:41,049 Sleeping for 9s. Reason: RUNNING
2024-12-07 23:58:50,315 Sleeping for 6s. Reason: RUNNING
2024-12-07 23:58:56,568 Sleeping for 9s. Reason: RUNNING
2024-12-07 23:59:05,834 Sleeping for 10s. Reason: RUNNING
2024-12-07 23:59:16,099 Sleeping for 10s. Reason: RUNNING
2024-12-07 23:59:26,360 Sleeping for 10s. Reason: RUNNING
2024-12-07 23:59:36,619 Sleeping for 10s. Reason: RUNNING
2024-12-07 23:59:48,325 Sleeping for 6s. Reason: PENDING
2024-12-07 23:59:54,583 Sleeping for 10s. Reason: RUNNING
2024-12-08 00:00:04,841 Sleeping for 6s. Reason: RUNNING
2024-12-08 00:00:11,104 Sleeping for 8s. Reason: RUNNING
2024-12-08 00:00:19,370 Sleeping for 10s. Reason: RUNNING
2024-12-08 00:00:29,632 Sleeping for 7s. Reason: RUNNING
2024-12-08 00:00:36,890 Sleeping for 7s. Reason: RUNNING
2024-12-08 00:00:44,148 Sleeping for 9s. Reason: RUNNING
2024-12-08 00:00:55,783 Setting max_seq=508, max_extra_seq=2048
2024-12-08 00:04:09,381 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=54.1 pTM=0.314 ipTM=0.246
2024-12-08 00:04:56,432 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=51.5 pTM=0.31 ipTM=0.197 tol=20.4
2024-12-08 00:05:43,722 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=50.4 pTM=0.314 ipTM=0.306 tol=22.8
2024-12-08 00:06:31,200 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=50.4 pTM=0.309 ipTM=0.26 tol=8.98
2024-12-08 00:07:18,723 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=51 pTM=0.309 ipTM=0.243 tol=6.43
2024-12-08 00:08:06,251 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=50.7 pTM=0.31 ipTM=0.223 tol=4.84
2024-12-08 00:08:53,769 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=50.9 pTM=0.307 ipTM=0.209 tol=3.09
2024-12-08 00:09:41,268 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=50.6 pTM=0.309 ipTM=0.207 tol=2.97
2024-12-08 00:10:28,768 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=50.3 pTM=0.307 ipTM=0.205 tol=3.46
2024-12-08 00:11:16,282 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=50.9 pTM=0.31 ipTM=0.194 tol=4.85
2024-12-08 00:12:03,753 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=51.2 pTM=0.31 ipTM=0.191 tol=2.77
2024-12-08 00:12:51,221 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=51.6 pTM=0.309 ipTM=0.192 tol=3.79
2024-12-08 00:13:38,703 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=50.5 pTM=0.312 ipTM=0.206 tol=4.59
2024-12-08 00:14:26,213 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=51.2 pTM=0.313 ipTM=0.214 tol=2.92
2024-12-08 00:15:13,694 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=51.5 pTM=0.315 ipTM=0.214 tol=2.15
2024-12-08 00:16:01,188 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=51.9 pTM=0.314 ipTM=0.228 tol=1.78
2024-12-08 00:16:48,708 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=52.2 pTM=0.309 ipTM=0.203 tol=1.73
2024-12-08 00:17:36,209 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=51.9 pTM=0.311 ipTM=0.211 tol=1.88
2024-12-08 00:18:23,697 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=51.9 pTM=0.314 ipTM=0.242 tol=2.81
2024-12-08 00:19:11,217 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=51.9 pTM=0.319 ipTM=0.26 tol=2.52
2024-12-08 00:19:58,691 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=52.7 pTM=0.317 ipTM=0.263 tol=3.12
2024-12-08 00:20:46,175 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=52.6 pTM=0.319 ipTM=0.274 tol=2.2
2024-12-08 00:21:33,623 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=52.4 pTM=0.32 ipTM=0.293 tol=1.61
2024-12-08 00:22:21,091 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=52.9 pTM=0.319 ipTM=0.286 tol=3.06
2024-12-08 00:23:08,574 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=52.5 pTM=0.318 ipTM=0.267 tol=4.45
2024-12-08 00:23:56,091 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=52.5 pTM=0.319 ipTM=0.272 tol=1.76
2024-12-08 00:24:43,601 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=52.9 pTM=0.321 ipTM=0.27 tol=1.07
2024-12-08 00:25:31,091 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=52 pTM=0.32 ipTM=0.278 tol=2.06
2024-12-08 00:26:18,543 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=52.8 pTM=0.321 ipTM=0.268 tol=2.47
2024-12-08 00:27:05,960 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=52.1 pTM=0.32 ipTM=0.27 tol=2.05
2024-12-08 00:27:53,364 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=52.1 pTM=0.321 ipTM=0.274 tol=1.42
2024-12-08 00:27:53,365 alphafold2_multimer_v3_model_1_seed_000 took 1613.9s (30 recycles)
2024-12-08 00:28:41,898 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=52.7 pTM=0.317 ipTM=0.402
2024-12-08 00:29:29,316 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=52.1 pTM=0.319 ipTM=0.232 tol=19.2
2024-12-08 00:30:16,680 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=51.5 pTM=0.315 ipTM=0.178 tol=11.6
2024-12-08 00:31:04,045 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=52.1 pTM=0.312 ipTM=0.165 tol=7.73
2024-12-08 00:31:51,341 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=52.4 pTM=0.31 ipTM=0.162 tol=7.5
2024-12-08 00:32:38,700 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=52 pTM=0.312 ipTM=0.162 tol=5.22
2024-12-08 00:33:26,124 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=52.4 pTM=0.311 ipTM=0.161 tol=5.24
2024-12-08 00:34:13,573 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=52.4 pTM=0.312 ipTM=0.166 tol=3.4
2024-12-08 00:35:01,084 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=52.4 pTM=0.314 ipTM=0.162 tol=3.25
2024-12-08 00:35:48,652 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=52.5 pTM=0.316 ipTM=0.164 tol=2.78
2024-12-08 00:36:36,233 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=52.7 pTM=0.315 ipTM=0.167 tol=2.16
2024-12-08 00:37:23,826 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=52.8 pTM=0.314 ipTM=0.165 tol=2.21
2024-12-08 00:38:11,384 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=52.8 pTM=0.315 ipTM=0.167 tol=2.46
2024-12-08 00:38:58,946 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=52.3 pTM=0.315 ipTM=0.167 tol=3.05
2024-12-08 00:39:46,568 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=52.3 pTM=0.316 ipTM=0.169 tol=3.76
2024-12-08 00:40:34,220 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=52.6 pTM=0.315 ipTM=0.168 tol=5.47
2024-12-08 00:41:21,863 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=52.6 pTM=0.315 ipTM=0.17 tol=3.64
2024-12-08 00:42:09,463 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=52.8 pTM=0.315 ipTM=0.169 tol=3.81
2024-12-08 00:42:57,019 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=52.1 pTM=0.315 ipTM=0.168 tol=4.21
2024-12-08 00:43:44,586 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=52.2 pTM=0.313 ipTM=0.169 tol=3.15
2024-12-08 00:44:32,132 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=52.6 pTM=0.315 ipTM=0.171 tol=5.32
2024-12-08 00:45:19,637 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=52.7 pTM=0.313 ipTM=0.169 tol=4.97
2024-12-08 00:46:07,091 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=52.4 pTM=0.324 ipTM=0.308 tol=6.59
2024-12-08 00:46:54,570 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=52.4 pTM=0.318 ipTM=0.168 tol=6.57
2024-12-08 00:47:42,079 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=52.2 pTM=0.313 ipTM=0.167 tol=6.7
2024-12-08 00:48:29,609 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=52.3 pTM=0.315 ipTM=0.172 tol=3.19
2024-12-08 00:49:17,141 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=52.7 pTM=0.314 ipTM=0.17 tol=4.91
2024-12-08 00:50:04,652 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=51.5 pTM=0.316 ipTM=0.172 tol=4.3
2024-12-08 00:50:52,106 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=52.3 pTM=0.317 ipTM=0.177 tol=4.86
2024-12-08 00:51:39,560 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=52.2 pTM=0.317 ipTM=0.173 tol=5.06
2024-12-08 00:52:27,034 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=52.1 pTM=0.316 ipTM=0.169 tol=5.39
2024-12-08 00:52:27,036 alphafold2_multimer_v3_model_2_seed_000 took 1472.6s (30 recycles)
2024-12-08 00:53:15,706 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=50.1 pTM=0.308 ipTM=0.182
2024-12-08 00:54:03,314 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=49.9 pTM=0.329 ipTM=0.299 tol=23.9
2024-12-08 00:54:50,872 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=48.9 pTM=0.332 ipTM=0.239 tol=18.7
2024-12-08 00:55:38,436 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=49.1 pTM=0.339 ipTM=0.267 tol=10.9
2024-12-08 00:56:26,003 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=49.5 pTM=0.336 ipTM=0.218 tol=10.6
2024-12-08 00:57:13,537 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=49.5 pTM=0.341 ipTM=0.225 tol=7.68
2024-12-08 00:58:01,086 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=50 pTM=0.341 ipTM=0.229 tol=5.32
2024-12-08 00:58:48,609 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=50.1 pTM=0.342 ipTM=0.215 tol=3.91
2024-12-08 00:59:36,143 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=50.2 pTM=0.344 ipTM=0.237 tol=4.05
2024-12-08 01:00:23,673 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=50 pTM=0.346 ipTM=0.222 tol=3.31
2024-12-08 01:01:11,233 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=50.3 pTM=0.343 ipTM=0.203 tol=2.63
2024-12-08 01:01:58,832 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=50.1 pTM=0.348 ipTM=0.25 tol=4.07
2024-12-08 01:02:46,430 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=49.8 pTM=0.345 ipTM=0.227 tol=4.95
2024-12-08 01:03:33,980 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=50.2 pTM=0.345 ipTM=0.227 tol=5.07
2024-12-08 01:04:21,536 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=49.7 pTM=0.344 ipTM=0.234 tol=4.48
2024-12-08 01:05:09,011 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=50.2 pTM=0.347 ipTM=0.255 tol=5.52
2024-12-08 01:05:56,517 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=49.8 pTM=0.344 ipTM=0.246 tol=4.08
2024-12-08 01:06:43,995 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=50.3 pTM=0.346 ipTM=0.228 tol=4.31
2024-12-08 01:07:31,495 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=50.2 pTM=0.347 ipTM=0.24 tol=3.08
2024-12-08 01:08:19,009 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=50.2 pTM=0.347 ipTM=0.238 tol=3.86
2024-12-08 01:09:06,536 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=50.5 pTM=0.346 ipTM=0.249 tol=4.48
2024-12-08 01:09:54,113 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=50.3 pTM=0.347 ipTM=0.224 tol=6.54
2024-12-08 01:10:41,679 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=50.3 pTM=0.342 ipTM=0.196 tol=3.96
2024-12-08 01:11:29,189 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=50.3 pTM=0.346 ipTM=0.226 tol=5.82
2024-12-08 01:12:16,725 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=49.9 pTM=0.347 ipTM=0.226 tol=6.31
2024-12-08 01:13:04,301 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=50.2 pTM=0.341 ipTM=0.208 tol=4.3
2024-12-08 01:13:51,846 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=50.3 pTM=0.344 ipTM=0.229 tol=6.38
2024-12-08 01:14:39,395 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=50 pTM=0.347 ipTM=0.241 tol=6.04
2024-12-08 01:15:26,918 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=50.2 pTM=0.343 ipTM=0.2 tol=3.91
2024-12-08 01:16:14,407 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=50 pTM=0.346 ipTM=0.242 tol=7.05
2024-12-08 01:17:01,920 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=50.2 pTM=0.345 ipTM=0.231 tol=3.4
2024-12-08 01:17:01,921 alphafold2_multimer_v3_model_3_seed_000 took 1473.8s (30 recycles)
2024-12-08 01:17:50,560 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=48.1 pTM=0.309 ipTM=0.219
2024-12-08 01:18:38,091 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=45.8 pTM=0.345 ipTM=0.328 tol=19.8
2024-12-08 01:19:25,720 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=47.4 pTM=0.332 ipTM=0.262 tol=15
2024-12-08 01:20:13,363 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=47.1 pTM=0.331 ipTM=0.204 tol=6.9
2024-12-08 01:21:01,001 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=46.9 pTM=0.334 ipTM=0.202 tol=6.12
2024-12-08 01:21:48,729 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=47.5 pTM=0.333 ipTM=0.198 tol=7.55
2024-12-08 01:22:36,429 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=47.2 pTM=0.333 ipTM=0.189 tol=8.02
2024-12-08 01:23:24,105 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=47 pTM=0.331 ipTM=0.189 tol=5.56
2024-12-08 01:24:11,751 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=47.4 pTM=0.335 ipTM=0.192 tol=5.29
2024-12-08 01:24:59,450 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=47.8 pTM=0.336 ipTM=0.191 tol=4.3
2024-12-08 01:25:47,201 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=47.5 pTM=0.332 ipTM=0.191 tol=7.64
2024-12-08 01:26:34,854 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=47.4 pTM=0.337 ipTM=0.235 tol=5.29
2024-12-08 01:27:22,483 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=47.3 pTM=0.333 ipTM=0.188 tol=4.1
2024-12-08 01:28:10,124 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=47 pTM=0.335 ipTM=0.197 tol=7.71
2024-12-08 01:28:57,821 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=47.2 pTM=0.333 ipTM=0.18 tol=5.56
2024-12-08 01:29:45,401 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=47.1 pTM=0.334 ipTM=0.205 tol=5.77
2024-12-08 01:30:33,013 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=46.9 pTM=0.328 ipTM=0.172 tol=4.54
2024-12-08 01:31:20,654 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=47.2 pTM=0.329 ipTM=0.176 tol=6.19
2024-12-08 01:32:08,242 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=47.1 pTM=0.335 ipTM=0.194 tol=7
2024-12-08 01:32:55,863 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=46.8 pTM=0.332 ipTM=0.183 tol=4.67
2024-12-08 01:33:43,517 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=47 pTM=0.33 ipTM=0.179 tol=5.24
2024-12-08 01:34:31,221 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=47 pTM=0.328 ipTM=0.185 tol=7.51
2024-12-08 01:35:18,931 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=47.2 pTM=0.331 ipTM=0.187 tol=6.32
2024-12-08 01:36:06,670 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=47.3 pTM=0.331 ipTM=0.19 tol=7.34
2024-12-08 01:36:54,389 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=47 pTM=0.334 ipTM=0.186 tol=7.2
2024-12-08 01:37:42,165 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=47.2 pTM=0.332 ipTM=0.181 tol=4.3
2024-12-08 01:38:29,946 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=47.3 pTM=0.329 ipTM=0.177 tol=4.45
2024-12-08 01:39:17,705 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=47 pTM=0.331 ipTM=0.181 tol=7.93
2024-12-08 01:40:05,423 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=47 pTM=0.332 ipTM=0.198 tol=8.56
2024-12-08 01:40:53,124 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=47.2 pTM=0.333 ipTM=0.187 tol=6.31
2024-12-08 01:41:40,815 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=47.3 pTM=0.33 ipTM=0.18 tol=5.61
2024-12-08 01:41:40,816 alphafold2_multimer_v3_model_4_seed_000 took 1477.8s (30 recycles)
2024-12-08 01:42:29,575 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=47.8 pTM=0.299 ipTM=0.174
2024-12-08 01:43:17,220 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=47.9 pTM=0.314 ipTM=0.208 tol=18.8
2024-12-08 01:44:04,863 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=48.5 pTM=0.318 ipTM=0.262 tol=13.2
2024-12-08 01:44:52,508 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=48 pTM=0.325 ipTM=0.27 tol=22
2024-12-08 01:45:40,075 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=48.5 pTM=0.331 ipTM=0.221 tol=10.2
2024-12-08 01:46:27,574 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=48.4 pTM=0.332 ipTM=0.238 tol=5.05
2024-12-08 01:47:15,095 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=49.1 pTM=0.331 ipTM=0.216 tol=5.39
2024-12-08 01:48:02,636 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=49.4 pTM=0.334 ipTM=0.214 tol=4.56
2024-12-08 01:48:50,160 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=49.4 pTM=0.335 ipTM=0.235 tol=4.21
2024-12-08 01:49:37,686 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=49.3 pTM=0.34 ipTM=0.234 tol=3.71
2024-12-08 01:50:25,194 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=49.5 pTM=0.335 ipTM=0.203 tol=5.35
2024-12-08 01:51:12,661 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=49.7 pTM=0.338 ipTM=0.2 tol=4.97
2024-12-08 01:52:00,091 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=49.9 pTM=0.341 ipTM=0.251 tol=3.28
2024-12-08 01:52:47,458 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=49.9 pTM=0.341 ipTM=0.264 tol=3.82
2024-12-08 01:53:34,861 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=49.9 pTM=0.343 ipTM=0.283 tol=3.4
2024-12-08 01:54:22,301 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=50.2 pTM=0.344 ipTM=0.3 tol=1.86
2024-12-08 01:55:09,795 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=50.1 pTM=0.343 ipTM=0.296 tol=2.58
2024-12-08 01:55:57,304 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=50.1 pTM=0.344 ipTM=0.31 tol=3.4
2024-12-08 01:56:44,865 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=50.1 pTM=0.346 ipTM=0.306 tol=2.41
2024-12-08 01:57:32,424 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=50 pTM=0.347 ipTM=0.312 tol=2.65
2024-12-08 01:58:19,960 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=50 pTM=0.352 ipTM=0.324 tol=2.93
2024-12-08 01:59:07,532 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=50.2 pTM=0.347 ipTM=0.291 tol=3.53
2024-12-08 01:59:55,090 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=50.3 pTM=0.354 ipTM=0.302 tol=3.29
2024-12-08 02:00:42,643 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=50.4 pTM=0.355 ipTM=0.316 tol=1.63
2024-12-08 02:01:30,158 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=50.6 pTM=0.358 ipTM=0.302 tol=2.23
2024-12-08 02:02:17,684 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=50.2 pTM=0.357 ipTM=0.302 tol=4.01
2024-12-08 02:03:05,197 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=50.6 pTM=0.356 ipTM=0.306 tol=3.4
2024-12-08 02:03:52,689 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=49.9 pTM=0.361 ipTM=0.316 tol=3.2
2024-12-08 02:04:40,186 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=50.6 pTM=0.357 ipTM=0.32 tol=3.14
2024-12-08 02:05:27,648 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=50.5 pTM=0.36 ipTM=0.329 tol=3.79
2024-12-08 02:06:15,103 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=50.5 pTM=0.357 ipTM=0.343 tol=2.9
2024-12-08 02:06:15,105 alphafold2_multimer_v3_model_5_seed_000 took 1473.2s (30 recycles)
2024-12-08 02:06:16,181 reranking models by 'multimer' metric
2024-12-08 02:06:18,867 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-08 02:08:31,500 Relaxation took 135.3s
2024-12-08 02:08:31,500 rank_001_alphafold2_multimer_v3_model_5_seed_000 pLDDT=50.5 pTM=0.357 ipTM=0.343
2024-12-08 02:10:18,828 Relaxation took 107.3s
2024-12-08 02:10:18,828 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=52.1 pTM=0.321 ipTM=0.274
2024-12-08 02:13:32,608 Relaxation took 193.8s
2024-12-08 02:13:32,608 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=50.2 pTM=0.345 ipTM=0.231
2024-12-08 02:16:16,652 Relaxation took 164.0s
2024-12-08 02:16:16,652 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=47.3 pTM=0.33 ipTM=0.18
2024-12-08 02:18:20,505 Relaxation took 123.9s
2024-12-08 02:18:20,506 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=52.1 pTM=0.316 ipTM=0.169
2024-12-08 02:18:23,231 Done