2024-12-08 00:15:59,636 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-08 00:15:59,934 Running on GPU
2024-12-08 00:16:01,892 Found 6 citations for tools or databases
2024-12-08 00:16:01,892 Query 1/1: RNF10_UBE2D1 (length 958)
2024-12-08 00:16:02,147 Sleeping for 10s. Reason: PENDING
2024-12-08 00:16:12,418 Sleeping for 10s. Reason: PENDING
2024-12-08 00:16:22,672 Sleeping for 9s. Reason: PENDING
2024-12-08 00:16:31,928 Sleeping for 6s. Reason: PENDING
2024-12-08 00:16:38,187 Sleeping for 6s. Reason: PENDING
2024-12-08 00:16:44,449 Sleeping for 10s. Reason: PENDING
2024-12-08 00:16:54,712 Sleeping for 8s. Reason: PENDING
2024-12-08 00:17:02,972 Sleeping for 6s. Reason: RUNNING
2024-12-08 00:17:09,232 Sleeping for 10s. Reason: RUNNING
2024-12-08 00:17:19,496 Sleeping for 8s. Reason: RUNNING
2024-12-08 00:17:27,752 Sleeping for 9s. Reason: RUNNING
2024-12-08 00:17:37,009 Sleeping for 8s. Reason: RUNNING
2024-12-08 00:17:45,266 Sleeping for 10s. Reason: RUNNING
2024-12-08 00:17:55,530 Sleeping for 5s. Reason: RUNNING
2024-12-08 00:18:00,785 Sleeping for 7s. Reason: RUNNING
2024-12-08 00:18:08,041 Sleeping for 6s. Reason: RUNNING
2024-12-08 00:18:14,296 Sleeping for 5s. Reason: RUNNING
2024-12-08 00:18:19,555 Sleeping for 8s. Reason: RUNNING
2024-12-08 00:18:27,813 Sleeping for 7s. Reason: RUNNING
2024-12-08 00:18:35,067 Sleeping for 10s. Reason: RUNNING
2024-12-08 00:18:45,324 Sleeping for 8s. Reason: RUNNING
2024-12-08 00:18:53,583 Sleeping for 8s. Reason: RUNNING
2024-12-08 00:19:01,850 Sleeping for 8s. Reason: RUNNING
2024-12-08 00:19:10,110 Sleeping for 10s. Reason: RUNNING
2024-12-08 00:19:22,192 Sleeping for 9s. Reason: PENDING
2024-12-08 00:19:31,455 Sleeping for 5s. Reason: PENDING
2024-12-08 00:19:36,717 Sleeping for 6s. Reason: RUNNING
2024-12-08 00:19:42,981 Sleeping for 6s. Reason: RUNNING
2024-12-08 00:19:49,241 Sleeping for 7s. Reason: RUNNING
2024-12-08 00:19:56,500 Sleeping for 5s. Reason: RUNNING
2024-12-08 00:20:01,750 Sleeping for 8s. Reason: RUNNING
2024-12-08 00:20:10,007 Sleeping for 9s. Reason: RUNNING
2024-12-08 00:20:19,268 Sleeping for 10s. Reason: RUNNING
2024-12-08 00:20:29,526 Sleeping for 5s. Reason: RUNNING
2024-12-08 00:20:34,777 Sleeping for 9s. Reason: RUNNING
2024-12-08 00:20:44,044 Sleeping for 6s. Reason: RUNNING
2024-12-08 00:20:50,299 Sleeping for 8s. Reason: RUNNING
2024-12-08 00:21:02,554 Setting max_seq=508, max_extra_seq=2048
2024-12-08 00:23:44,906 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=55.8 pTM=0.535 ipTM=0.922
2024-12-08 00:24:04,325 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=56.4 pTM=0.539 ipTM=0.926 tol=8.19
2024-12-08 00:24:23,779 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=56.6 pTM=0.54 ipTM=0.921 tol=4.75
2024-12-08 00:24:43,256 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=56.6 pTM=0.535 ipTM=0.92 tol=4.86
2024-12-08 00:25:02,765 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=56.7 pTM=0.535 ipTM=0.919 tol=2.57
2024-12-08 00:25:22,294 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=56.8 pTM=0.534 ipTM=0.917 tol=3.99
2024-12-08 00:25:41,820 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=56.8 pTM=0.534 ipTM=0.917 tol=4.12
2024-12-08 00:26:01,367 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=56.8 pTM=0.534 ipTM=0.916 tol=4.33
2024-12-08 00:26:20,940 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=57 pTM=0.537 ipTM=0.92 tol=4.1
2024-12-08 00:26:40,519 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=57 pTM=0.536 ipTM=0.919 tol=4.2
2024-12-08 00:27:00,090 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=57 pTM=0.536 ipTM=0.919 tol=2.34
2024-12-08 00:27:19,658 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=57 pTM=0.538 ipTM=0.92 tol=3.92
2024-12-08 00:27:39,226 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=57.1 pTM=0.539 ipTM=0.919 tol=4.21
2024-12-08 00:27:58,795 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=57.1 pTM=0.539 ipTM=0.919 tol=3.53
2024-12-08 00:28:18,367 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=57.1 pTM=0.538 ipTM=0.917 tol=3.71
2024-12-08 00:28:37,949 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=57 pTM=0.538 ipTM=0.918 tol=3.48
2024-12-08 00:28:57,534 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=57.1 pTM=0.539 ipTM=0.919 tol=1.69
2024-12-08 00:29:17,127 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=57.2 pTM=0.539 ipTM=0.918 tol=1.51
2024-12-08 00:29:36,700 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=57 pTM=0.537 ipTM=0.917 tol=1.04
2024-12-08 00:29:56,261 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=57 pTM=0.537 ipTM=0.916 tol=4.11
2024-12-08 00:30:15,851 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=57 pTM=0.537 ipTM=0.917 tol=1.98
2024-12-08 00:30:35,425 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=57 pTM=0.539 ipTM=0.918 tol=1.43
2024-12-08 00:30:55,000 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=57 pTM=0.538 ipTM=0.918 tol=3.74
2024-12-08 00:31:14,575 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=57 pTM=0.538 ipTM=0.919 tol=3.85
2024-12-08 00:31:34,149 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=57 pTM=0.538 ipTM=0.917 tol=1.86
2024-12-08 00:31:53,719 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=57 pTM=0.539 ipTM=0.918 tol=2.51
2024-12-08 00:32:13,301 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=57 pTM=0.538 ipTM=0.919 tol=3.92
2024-12-08 00:32:32,857 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=57.1 pTM=0.539 ipTM=0.918 tol=3.68
2024-12-08 00:32:52,425 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=57 pTM=0.537 ipTM=0.917 tol=1.62
2024-12-08 00:33:11,980 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=57 pTM=0.538 ipTM=0.917 tol=3.41
2024-12-08 00:33:31,558 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=57 pTM=0.539 ipTM=0.919 tol=1.4
2024-12-08 00:33:31,559 alphafold2_multimer_v3_model_1_seed_000 took 745.5s (30 recycles)
2024-12-08 00:33:51,691 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=55.9 pTM=0.542 ipTM=0.925
2024-12-08 00:34:11,307 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=56.2 pTM=0.541 ipTM=0.929 tol=10.2
2024-12-08 00:34:30,908 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=56.4 pTM=0.539 ipTM=0.925 tol=6.96
2024-12-08 00:34:50,526 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=56.8 pTM=0.539 ipTM=0.925 tol=6.33
2024-12-08 00:35:10,130 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=56.9 pTM=0.538 ipTM=0.925 tol=4.3
2024-12-08 00:35:29,729 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=56.9 pTM=0.539 ipTM=0.922 tol=3.34
2024-12-08 00:35:49,336 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=57 pTM=0.539 ipTM=0.923 tol=4.05
2024-12-08 00:36:08,929 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=57.1 pTM=0.54 ipTM=0.921 tol=5.45
2024-12-08 00:36:28,524 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=57.2 pTM=0.543 ipTM=0.923 tol=5.91
2024-12-08 00:36:48,123 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=57.2 pTM=0.543 ipTM=0.923 tol=2.89
2024-12-08 00:37:07,705 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=57.3 pTM=0.544 ipTM=0.923 tol=2.16
2024-12-08 00:37:27,300 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=57.3 pTM=0.544 ipTM=0.922 tol=1.84
2024-12-08 00:37:46,893 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=57.3 pTM=0.544 ipTM=0.923 tol=2.52
2024-12-08 00:38:06,493 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=57.4 pTM=0.545 ipTM=0.923 tol=1.69
2024-12-08 00:38:26,075 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=57.4 pTM=0.545 ipTM=0.922 tol=1.91
2024-12-08 00:38:45,668 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=57.3 pTM=0.544 ipTM=0.924 tol=1.91
2024-12-08 00:39:05,283 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=57.5 pTM=0.546 ipTM=0.924 tol=1.76
2024-12-08 00:39:24,883 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=57.5 pTM=0.546 ipTM=0.923 tol=2.19
2024-12-08 00:39:44,479 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=57.5 pTM=0.545 ipTM=0.921 tol=2.09
2024-12-08 00:40:04,069 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=57.4 pTM=0.545 ipTM=0.92 tol=5.03
2024-12-08 00:40:23,651 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=57.3 pTM=0.545 ipTM=0.92 tol=4.88
2024-12-08 00:40:43,244 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=57.5 pTM=0.545 ipTM=0.922 tol=2.49
2024-12-08 00:41:02,836 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=57.3 pTM=0.545 ipTM=0.922 tol=2.25
2024-12-08 00:41:22,447 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=57.4 pTM=0.545 ipTM=0.923 tol=2.42
2024-12-08 00:41:42,037 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=57.6 pTM=0.546 ipTM=0.922 tol=2.43
2024-12-08 00:42:01,637 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=57.5 pTM=0.546 ipTM=0.921 tol=2.76
2024-12-08 00:42:21,237 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=57.4 pTM=0.544 ipTM=0.922 tol=2.23
2024-12-08 00:42:40,828 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=57.5 pTM=0.545 ipTM=0.921 tol=1.91
2024-12-08 00:43:00,409 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=57.4 pTM=0.544 ipTM=0.92 tol=1.79
2024-12-08 00:43:19,978 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=57.5 pTM=0.545 ipTM=0.92 tol=2.06
2024-12-08 00:43:39,574 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=57.3 pTM=0.545 ipTM=0.923 tol=2.4
2024-12-08 00:43:39,575 alphafold2_multimer_v3_model_2_seed_000 took 607.4s (30 recycles)
2024-12-08 00:43:59,803 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=56.4 pTM=0.543 ipTM=0.921
2024-12-08 00:44:19,505 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=56.9 pTM=0.543 ipTM=0.932 tol=12.6
2024-12-08 00:44:39,169 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=57 pTM=0.545 ipTM=0.927 tol=10.1
2024-12-08 00:44:58,832 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=57.3 pTM=0.545 ipTM=0.926 tol=5.77
2024-12-08 00:45:18,481 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=57.4 pTM=0.548 ipTM=0.925 tol=5.3
2024-12-08 00:45:38,109 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=57.3 pTM=0.546 ipTM=0.925 tol=3.6
2024-12-08 00:45:57,750 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=57.2 pTM=0.544 ipTM=0.923 tol=4.07
2024-12-08 00:46:17,396 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=57.5 pTM=0.548 ipTM=0.925 tol=3.28
2024-12-08 00:46:37,044 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=57.4 pTM=0.548 ipTM=0.927 tol=5.11
2024-12-08 00:46:56,689 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=57.6 pTM=0.55 ipTM=0.928 tol=4.61
2024-12-08 00:47:16,300 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=57.4 pTM=0.547 ipTM=0.925 tol=3.58
2024-12-08 00:47:35,954 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=57.5 pTM=0.549 ipTM=0.927 tol=3.55
2024-12-08 00:47:55,614 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=57.5 pTM=0.548 ipTM=0.927 tol=3.41
2024-12-08 00:48:15,267 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=57.6 pTM=0.549 ipTM=0.926 tol=3.43
2024-12-08 00:48:34,928 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=57.4 pTM=0.548 ipTM=0.925 tol=3.68
2024-12-08 00:48:54,584 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=57.6 pTM=0.549 ipTM=0.926 tol=3.55
2024-12-08 00:49:14,235 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=57.5 pTM=0.548 ipTM=0.926 tol=3.94
2024-12-08 00:49:33,899 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=57.6 pTM=0.549 ipTM=0.926 tol=3.38
2024-12-08 00:49:53,539 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=57.4 pTM=0.548 ipTM=0.925 tol=2.07
2024-12-08 00:50:13,187 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=57.5 pTM=0.548 ipTM=0.924 tol=3.3
2024-12-08 00:50:32,822 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=57.5 pTM=0.548 ipTM=0.926 tol=2.75
2024-12-08 00:50:52,455 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=57.6 pTM=0.549 ipTM=0.925 tol=1.19
2024-12-08 00:51:12,083 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=57.4 pTM=0.547 ipTM=0.924 tol=1.43
2024-12-08 00:51:31,726 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=57.6 pTM=0.549 ipTM=0.926 tol=1.25
2024-12-08 00:51:51,352 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=57.5 pTM=0.547 ipTM=0.926 tol=2.9
2024-12-08 00:52:10,980 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=57.5 pTM=0.548 ipTM=0.925 tol=1.46
2024-12-08 00:52:30,606 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=57.4 pTM=0.547 ipTM=0.927 tol=2.95
2024-12-08 00:52:50,247 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=57.7 pTM=0.549 ipTM=0.926 tol=1.38
2024-12-08 00:53:09,873 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=57.4 pTM=0.547 ipTM=0.924 tol=1.58
2024-12-08 00:53:29,518 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=57.7 pTM=0.55 ipTM=0.926 tol=2.78
2024-12-08 00:53:49,173 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=57.5 pTM=0.548 ipTM=0.927 tol=1.77
2024-12-08 00:53:49,174 alphafold2_multimer_v3_model_3_seed_000 took 609.0s (30 recycles)
2024-12-08 00:54:09,369 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=55.8 pTM=0.539 ipTM=0.928
2024-12-08 00:54:29,035 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=56.5 pTM=0.542 ipTM=0.934 tol=9.2
2024-12-08 00:54:48,701 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=56.5 pTM=0.538 ipTM=0.929 tol=7.27
2024-12-08 00:55:08,381 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=56.7 pTM=0.539 ipTM=0.929 tol=4.38
2024-12-08 00:55:28,039 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=56.5 pTM=0.537 ipTM=0.928 tol=2.66
2024-12-08 00:55:47,729 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=56.8 pTM=0.539 ipTM=0.927 tol=6.18
2024-12-08 00:56:07,389 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=56.8 pTM=0.536 ipTM=0.926 tol=2.81
2024-12-08 00:56:27,061 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=56.9 pTM=0.54 ipTM=0.927 tol=6.36
2024-12-08 00:56:46,739 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=56.8 pTM=0.539 ipTM=0.928 tol=6.32
2024-12-08 00:57:06,422 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=57 pTM=0.539 ipTM=0.927 tol=1.94
2024-12-08 00:57:26,096 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=56.9 pTM=0.536 ipTM=0.927 tol=1.48
2024-12-08 00:57:45,776 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=56.9 pTM=0.539 ipTM=0.927 tol=5.59
2024-12-08 00:58:05,447 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=56.9 pTM=0.538 ipTM=0.928 tol=2
2024-12-08 00:58:25,133 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=57 pTM=0.539 ipTM=0.927 tol=5.8
2024-12-08 00:58:44,807 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=57.1 pTM=0.539 ipTM=0.927 tol=2.19
2024-12-08 00:59:04,467 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=57 pTM=0.539 ipTM=0.926 tol=5.75
2024-12-08 00:59:24,136 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=57 pTM=0.54 ipTM=0.927 tol=5.36
2024-12-08 00:59:43,790 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=57.1 pTM=0.539 ipTM=0.926 tol=2.49
2024-12-08 01:00:03,445 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=57 pTM=0.539 ipTM=0.926 tol=6.73
2024-12-08 01:00:23,105 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=57 pTM=0.539 ipTM=0.924 tol=3.13
2024-12-08 01:00:42,759 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=57 pTM=0.54 ipTM=0.926 tol=6.24
2024-12-08 01:01:02,410 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=57 pTM=0.54 ipTM=0.926 tol=5.29
2024-12-08 01:01:22,066 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=57.1 pTM=0.541 ipTM=0.925 tol=6.91
2024-12-08 01:01:41,721 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=57.1 pTM=0.541 ipTM=0.927 tol=2.01
2024-12-08 01:02:01,377 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=57.2 pTM=0.541 ipTM=0.927 tol=1.65
2024-12-08 01:02:21,039 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=57 pTM=0.54 ipTM=0.926 tol=6.26
2024-12-08 01:02:40,710 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=57.1 pTM=0.54 ipTM=0.927 tol=6.24
2024-12-08 01:03:00,379 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=57.1 pTM=0.54 ipTM=0.926 tol=2.41
2024-12-08 01:03:20,034 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=57 pTM=0.54 ipTM=0.925 tol=2.33
2024-12-08 01:03:39,699 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=57 pTM=0.541 ipTM=0.926 tol=6.86
2024-12-08 01:03:59,369 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=57 pTM=0.54 ipTM=0.927 tol=2.07
2024-12-08 01:03:59,370 alphafold2_multimer_v3_model_4_seed_000 took 609.6s (30 recycles)
2024-12-08 01:04:19,637 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=56.6 pTM=0.545 ipTM=0.921
2024-12-08 01:04:39,342 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=56.8 pTM=0.543 ipTM=0.931 tol=11.3
2024-12-08 01:04:59,034 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=57 pTM=0.541 ipTM=0.927 tol=8.82
2024-12-08 01:05:18,737 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=57.2 pTM=0.541 ipTM=0.927 tol=3.47
2024-12-08 01:05:38,433 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=57.3 pTM=0.54 ipTM=0.927 tol=6.42
2024-12-08 01:05:58,133 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=57.5 pTM=0.542 ipTM=0.926 tol=4.34
2024-12-08 01:06:17,815 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=57.3 pTM=0.54 ipTM=0.925 tol=2.89
2024-12-08 01:06:37,491 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=57.3 pTM=0.541 ipTM=0.925 tol=2.57
2024-12-08 01:06:57,192 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=57.5 pTM=0.543 ipTM=0.927 tol=4.33
2024-12-08 01:07:16,881 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=57.4 pTM=0.542 ipTM=0.927 tol=4.24
2024-12-08 01:07:36,577 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=57.6 pTM=0.542 ipTM=0.926 tol=2.41
2024-12-08 01:07:56,265 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=57.4 pTM=0.542 ipTM=0.926 tol=3.09
2024-12-08 01:08:15,945 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=57.6 pTM=0.545 ipTM=0.927 tol=2.89
2024-12-08 01:08:35,627 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=57.5 pTM=0.544 ipTM=0.926 tol=2.95
2024-12-08 01:08:55,302 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=57.7 pTM=0.546 ipTM=0.927 tol=2.1
2024-12-08 01:09:14,988 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=57.5 pTM=0.544 ipTM=0.926 tol=5.38
2024-12-08 01:09:34,675 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=57.8 pTM=0.548 ipTM=0.928 tol=2.04
2024-12-08 01:09:54,358 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=57.7 pTM=0.545 ipTM=0.925 tol=3.72
2024-12-08 01:10:14,042 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=57.7 pTM=0.545 ipTM=0.925 tol=3.6
2024-12-08 01:10:33,708 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=57.5 pTM=0.543 ipTM=0.923 tol=5.5
2024-12-08 01:10:53,397 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=57.5 pTM=0.545 ipTM=0.926 tol=4.47
2024-12-08 01:11:13,074 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=57.4 pTM=0.543 ipTM=0.925 tol=2.38
2024-12-08 01:11:32,754 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=57.5 pTM=0.544 ipTM=0.925 tol=2.76
2024-12-08 01:11:52,438 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=57.5 pTM=0.544 ipTM=0.926 tol=3.78
2024-12-08 01:12:12,110 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=57.6 pTM=0.544 ipTM=0.927 tol=4.5
2024-12-08 01:12:31,762 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=57.5 pTM=0.544 ipTM=0.924 tol=6.72
2024-12-08 01:12:51,440 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=57.6 pTM=0.545 ipTM=0.926 tol=7.47
2024-12-08 01:13:11,102 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=57.6 pTM=0.545 ipTM=0.926 tol=6.03
2024-12-08 01:13:30,770 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=57.6 pTM=0.545 ipTM=0.925 tol=5.67
2024-12-08 01:13:50,423 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=57.5 pTM=0.545 ipTM=0.925 tol=3.78
2024-12-08 01:14:10,084 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=57.6 pTM=0.545 ipTM=0.926 tol=3.29
2024-12-08 01:14:10,084 alphafold2_multimer_v3_model_5_seed_000 took 610.1s (30 recycles)
2024-12-08 01:14:10,649 reranking models by 'multimer' metric
2024-12-08 01:14:13,820 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-08 01:15:53,438 Relaxation took 102.8s
2024-12-08 01:15:53,439 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=57.5 pTM=0.548 ipTM=0.927
2024-12-08 01:16:58,641 Relaxation took 65.2s
2024-12-08 01:16:58,641 rank_002_alphafold2_multimer_v3_model_5_seed_000 pLDDT=57.6 pTM=0.545 ipTM=0.926
2024-12-08 01:17:59,974 Relaxation took 61.3s
2024-12-08 01:17:59,974 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=57 pTM=0.54 ipTM=0.927
2024-12-08 01:19:03,726 Relaxation took 63.8s
2024-12-08 01:19:03,726 rank_004_alphafold2_multimer_v3_model_2_seed_000 pLDDT=57.3 pTM=0.545 ipTM=0.923
2024-12-08 01:20:31,532 Relaxation took 87.8s
2024-12-08 01:20:31,533 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=57 pTM=0.539 ipTM=0.919
2024-12-08 01:20:33,187 Done