2024-12-08 01:47:55,069 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-08 01:47:55,391 Running on GPU
2024-12-08 01:47:58,843 Found 6 citations for tools or databases
2024-12-08 01:47:58,843 Query 1/1: RNF123_USP48 (length 2349)
2024-12-08 01:47:59,121 Sleeping for 9s. Reason: PENDING
2024-12-08 01:48:08,385 Sleeping for 5s. Reason: RUNNING
2024-12-08 01:48:13,642 Sleeping for 9s. Reason: RUNNING
2024-12-08 01:48:22,904 Sleeping for 8s. Reason: RUNNING
2024-12-08 01:48:31,158 Sleeping for 7s. Reason: RUNNING
2024-12-08 01:48:38,416 Sleeping for 10s. Reason: RUNNING
2024-12-08 01:48:48,692 Sleeping for 5s. Reason: RUNNING
2024-12-08 01:48:53,945 Sleeping for 8s. Reason: RUNNING
2024-12-08 01:49:02,211 Sleeping for 7s. Reason: RUNNING
2024-12-08 01:49:09,468 Sleeping for 9s. Reason: RUNNING
2024-12-08 01:49:18,729 Sleeping for 9s. Reason: RUNNING
2024-12-08 01:49:27,991 Sleeping for 9s. Reason: RUNNING
2024-12-08 01:49:37,252 Sleeping for 5s. Reason: RUNNING
2024-12-08 01:49:42,506 Sleeping for 5s. Reason: RUNNING
2024-12-08 01:49:47,769 Sleeping for 8s. Reason: RUNNING
2024-12-08 01:49:56,028 Sleeping for 7s. Reason: RUNNING
2024-12-08 01:50:03,285 Sleeping for 5s. Reason: RUNNING
2024-12-08 01:50:08,540 Sleeping for 8s. Reason: RUNNING
2024-12-08 01:50:16,810 Sleeping for 7s. Reason: RUNNING
2024-12-08 01:50:24,070 Sleeping for 6s. Reason: RUNNING
2024-12-08 01:50:30,327 Sleeping for 6s. Reason: RUNNING
2024-12-08 01:50:36,592 Sleeping for 10s. Reason: RUNNING
2024-12-08 01:50:46,848 Sleeping for 10s. Reason: RUNNING
2024-12-08 01:50:57,107 Sleeping for 10s. Reason: RUNNING
2024-12-08 01:51:07,366 Sleeping for 8s. Reason: RUNNING
2024-12-08 01:51:15,629 Sleeping for 5s. Reason: RUNNING
2024-12-08 01:51:20,887 Sleeping for 10s. Reason: RUNNING
2024-12-08 01:51:31,160 Sleeping for 6s. Reason: RUNNING
2024-12-08 01:51:39,432 Sleeping for 10s. Reason: PENDING
2024-12-08 01:51:49,692 Sleeping for 6s. Reason: RUNNING
2024-12-08 01:51:55,945 Sleeping for 9s. Reason: RUNNING
2024-12-08 01:52:05,199 Sleeping for 9s. Reason: RUNNING
2024-12-08 01:52:14,463 Sleeping for 7s. Reason: RUNNING
2024-12-08 01:52:21,717 Sleeping for 9s. Reason: RUNNING
2024-12-08 01:52:30,975 Sleeping for 5s. Reason: RUNNING
2024-12-08 01:52:36,238 Sleeping for 10s. Reason: RUNNING
2024-12-08 01:52:46,501 Sleeping for 7s. Reason: RUNNING
2024-12-08 01:52:53,762 Sleeping for 8s. Reason: RUNNING
2024-12-08 01:53:02,018 Sleeping for 9s. Reason: RUNNING
2024-12-08 01:53:11,281 Sleeping for 7s. Reason: RUNNING
2024-12-08 01:53:18,537 Sleeping for 6s. Reason: RUNNING
2024-12-08 01:53:24,792 Sleeping for 10s. Reason: RUNNING
2024-12-08 01:53:35,051 Sleeping for 8s. Reason: RUNNING
2024-12-08 01:53:51,743 Setting max_seq=508, max_extra_seq=2048
2024-12-08 02:01:09,683 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=69.8 pTM=0.564 ipTM=0.246
2024-12-08 02:05:16,509 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=70.9 pTM=0.579 ipTM=0.282 tol=12.4
2024-12-08 02:09:23,190 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=71.8 pTM=0.586 ipTM=0.288 tol=6.24
2024-12-08 02:13:29,864 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=71.5 pTM=0.584 ipTM=0.275 tol=4.02
2024-12-08 02:17:36,583 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=72.2 pTM=0.593 ipTM=0.292 tol=3.07
2024-12-08 02:21:43,360 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=72.1 pTM=0.592 ipTM=0.288 tol=2.41
2024-12-08 02:25:50,176 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=72.1 pTM=0.598 ipTM=0.303 tol=1.67
2024-12-08 02:29:56,942 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=72.2 pTM=0.6 ipTM=0.301 tol=1.4
2024-12-08 02:34:03,740 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=72.3 pTM=0.6 ipTM=0.297 tol=1.26
2024-12-08 02:38:10,558 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=72.6 pTM=0.598 ipTM=0.294 tol=2.59
2024-12-08 02:42:17,388 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=72.6 pTM=0.594 ipTM=0.281 tol=2.17
2024-12-08 02:46:24,158 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=72.6 pTM=0.6 ipTM=0.297 tol=2.62
2024-12-08 02:50:30,896 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=72.4 pTM=0.603 ipTM=0.315 tol=2.54
2024-12-08 02:54:37,657 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=72.7 pTM=0.611 ipTM=0.333 tol=3.49
2024-12-08 02:58:44,481 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=72.8 pTM=0.606 ipTM=0.31 tol=2.69
2024-12-08 03:02:51,282 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=72.4 pTM=0.601 ipTM=0.3 tol=1.67
2024-12-08 03:06:58,086 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=72.5 pTM=0.604 ipTM=0.301 tol=2.16
2024-12-08 03:11:04,902 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=72.6 pTM=0.603 ipTM=0.304 tol=3.23
2024-12-08 03:15:11,705 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=72.4 pTM=0.602 ipTM=0.298 tol=2.88
2024-12-08 03:19:18,482 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=72.4 pTM=0.608 ipTM=0.312 tol=3.04
2024-12-08 03:23:25,281 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=72.8 pTM=0.61 ipTM=0.32 tol=2.63
2024-12-08 03:27:32,069 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=72.7 pTM=0.61 ipTM=0.32 tol=2.37
2024-12-08 03:31:38,956 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=72.8 pTM=0.601 ipTM=0.296 tol=3.11
2024-12-08 03:35:45,802 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=72.7 pTM=0.598 ipTM=0.292 tol=2.29
2024-12-08 03:39:52,591 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=72.6 pTM=0.603 ipTM=0.303 tol=2.2
2024-12-08 03:43:59,330 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=72.6 pTM=0.607 ipTM=0.316 tol=2.57
2024-12-08 03:48:06,105 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=72.5 pTM=0.605 ipTM=0.307 tol=2.79
2024-12-08 03:52:12,861 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=72.6 pTM=0.607 ipTM=0.313 tol=2.94
2024-12-08 03:56:19,682 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=72.6 pTM=0.602 ipTM=0.297 tol=2.99
2024-12-08 04:00:26,403 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=72.8 pTM=0.605 ipTM=0.304 tol=3.5
2024-12-08 04:04:33,151 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=72.9 pTM=0.613 ipTM=0.357 tol=2.45
2024-12-08 04:04:33,154 alphafold2_multimer_v3_model_1_seed_000 took 7836.5s (30 recycles)
2024-12-08 04:08:43,589 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=68.6 pTM=0.559 ipTM=0.234
2024-12-08 04:12:51,095 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=71.1 pTM=0.562 ipTM=0.23 tol=10.4
2024-12-08 04:16:58,580 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=71.4 pTM=0.562 ipTM=0.229 tol=7.28
2024-12-08 04:21:06,124 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=72.1 pTM=0.562 ipTM=0.228 tol=5.85
2024-12-08 04:25:13,502 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=72.6 pTM=0.562 ipTM=0.228 tol=5.48
2024-12-08 04:29:20,873 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=72.8 pTM=0.563 ipTM=0.227 tol=4.2
2024-12-08 04:33:28,344 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=73 pTM=0.562 ipTM=0.228 tol=3.61
2024-12-08 04:37:35,759 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=73.1 pTM=0.563 ipTM=0.23 tol=2.91
2024-12-08 04:41:43,137 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=73.4 pTM=0.565 ipTM=0.229 tol=2.49
2024-12-08 04:45:50,561 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=73.4 pTM=0.565 ipTM=0.227 tol=2.29
2024-12-08 04:49:57,998 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=73.4 pTM=0.567 ipTM=0.227 tol=1.85
2024-12-08 04:54:05,437 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=73.8 pTM=0.567 ipTM=0.225 tol=1.87
2024-12-08 04:58:12,893 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=73.3 pTM=0.565 ipTM=0.224 tol=1.69
2024-12-08 05:02:20,324 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=73.5 pTM=0.566 ipTM=0.224 tol=1.45
2024-12-08 05:06:27,715 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=73.8 pTM=0.566 ipTM=0.224 tol=2.15
2024-12-08 05:10:35,132 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=73.6 pTM=0.566 ipTM=0.225 tol=1.62
2024-12-08 05:14:42,496 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=73.6 pTM=0.568 ipTM=0.226 tol=1.62
2024-12-08 05:18:49,880 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=73.8 pTM=0.569 ipTM=0.227 tol=1.33
2024-12-08 05:22:57,259 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=73.7 pTM=0.568 ipTM=0.228 tol=1.02
2024-12-08 05:27:04,670 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=73.6 pTM=0.568 ipTM=0.227 tol=1.38
2024-12-08 05:31:12,075 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=73.6 pTM=0.567 ipTM=0.227 tol=1.7
2024-12-08 05:35:19,415 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=73.5 pTM=0.567 ipTM=0.228 tol=1.38
2024-12-08 05:39:26,748 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=73.6 pTM=0.569 ipTM=0.228 tol=0.994
2024-12-08 05:43:34,029 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=73.6 pTM=0.568 ipTM=0.228 tol=1.2
2024-12-08 05:47:41,411 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=73.6 pTM=0.568 ipTM=0.228 tol=1.43
2024-12-08 05:51:48,758 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=73.4 pTM=0.568 ipTM=0.229 tol=1.97
2024-12-08 05:55:56,003 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=73.5 pTM=0.569 ipTM=0.231 tol=1.53
2024-12-08 06:00:03,309 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=73.5 pTM=0.568 ipTM=0.229 tol=1.2
2024-12-08 06:04:10,648 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=73.6 pTM=0.569 ipTM=0.229 tol=1.4
2024-12-08 06:08:17,918 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=73.6 pTM=0.569 ipTM=0.228 tol=1.43
2024-12-08 06:12:25,151 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=73.6 pTM=0.569 ipTM=0.227 tol=2
2024-12-08 06:12:25,154 alphafold2_multimer_v3_model_2_seed_000 took 7668.8s (30 recycles)
2024-12-08 06:16:35,508 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=68.2 pTM=0.544 ipTM=0.211
2024-12-08 06:20:42,890 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=69.1 pTM=0.547 ipTM=0.208 tol=7.94
2024-12-08 06:24:50,151 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=69.2 pTM=0.551 ipTM=0.217 tol=5.33
2024-12-08 06:28:57,425 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=69.3 pTM=0.552 ipTM=0.216 tol=3.48
2024-12-08 06:33:04,629 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=69.4 pTM=0.553 ipTM=0.217 tol=3.57
2024-12-08 06:37:11,853 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=69.8 pTM=0.554 ipTM=0.22 tol=2.54
2024-12-08 06:41:19,154 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=69.9 pTM=0.554 ipTM=0.219 tol=2.68
2024-12-08 06:45:26,428 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=70.3 pTM=0.555 ipTM=0.223 tol=2.69
2024-12-08 06:49:33,685 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=70.3 pTM=0.557 ipTM=0.223 tol=2.32
2024-12-08 06:53:40,882 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=70.2 pTM=0.556 ipTM=0.223 tol=1.52
2024-12-08 06:57:48,098 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=70.3 pTM=0.557 ipTM=0.224 tol=1.39
2024-12-08 07:01:55,302 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=70.9 pTM=0.558 ipTM=0.225 tol=1.47
2024-12-08 07:06:02,432 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=71 pTM=0.557 ipTM=0.224 tol=1.82
2024-12-08 07:10:09,421 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=71.1 pTM=0.558 ipTM=0.226 tol=1.69
2024-12-08 07:14:16,457 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=70.9 pTM=0.557 ipTM=0.225 tol=2.39
2024-12-08 07:18:23,411 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=71.4 pTM=0.556 ipTM=0.225 tol=2.99
2024-12-08 07:22:30,457 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=71.6 pTM=0.557 ipTM=0.238 tol=1.83
2024-12-08 07:26:37,524 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=71.8 pTM=0.559 ipTM=0.271 tol=3.13
2024-12-08 07:30:44,542 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=71.8 pTM=0.558 ipTM=0.251 tol=1.08
2024-12-08 07:34:51,554 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=71.9 pTM=0.56 ipTM=0.271 tol=1.01
2024-12-08 07:38:58,598 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=71.7 pTM=0.559 ipTM=0.267 tol=1.13
2024-12-08 07:43:05,600 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=71.9 pTM=0.561 ipTM=0.298 tol=0.994
2024-12-08 07:47:12,670 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=72 pTM=0.56 ipTM=0.27 tol=0.773
2024-12-08 07:51:19,716 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=71.9 pTM=0.561 ipTM=0.286 tol=0.676
2024-12-08 07:55:26,642 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=72.1 pTM=0.561 ipTM=0.274 tol=0.93
2024-12-08 07:59:33,567 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=72 pTM=0.561 ipTM=0.277 tol=0.69
2024-12-08 08:03:40,442 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=72.2 pTM=0.562 ipTM=0.302 tol=0.718
2024-12-08 08:07:47,346 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=72.2 pTM=0.564 ipTM=0.335 tol=0.766
2024-12-08 08:11:54,195 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=72.2 pTM=0.564 ipTM=0.322 tol=0.893
2024-12-08 08:16:01,103 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=72.3 pTM=0.566 ipTM=0.35 tol=0.64
2024-12-08 08:20:07,978 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=72.2 pTM=0.563 ipTM=0.333 tol=0.922
2024-12-08 08:20:07,981 alphafold2_multimer_v3_model_3_seed_000 took 7659.7s (30 recycles)
2024-12-08 08:24:18,409 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=69.4 pTM=0.556 ipTM=0.227
2024-12-08 08:28:25,700 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=71.6 pTM=0.561 ipTM=0.216 tol=7.93
2024-12-08 08:32:33,001 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=71.8 pTM=0.565 ipTM=0.219 tol=4.83
2024-12-08 08:36:40,146 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=72.1 pTM=0.566 ipTM=0.221 tol=5.34
2024-12-08 08:40:47,358 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=72.4 pTM=0.567 ipTM=0.22 tol=2.4
2024-12-08 08:44:54,514 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=72.5 pTM=0.567 ipTM=0.222 tol=2.24
2024-12-08 08:49:01,762 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=72.4 pTM=0.567 ipTM=0.22 tol=2.19
2024-12-08 08:53:09,017 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=72.7 pTM=0.567 ipTM=0.223 tol=2.41
2024-12-08 08:57:16,214 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=71.8 pTM=0.568 ipTM=0.221 tol=6.23
2024-12-08 09:01:23,358 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=72.6 pTM=0.566 ipTM=0.223 tol=5.39
2024-12-08 09:05:30,403 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=72.6 pTM=0.567 ipTM=0.222 tol=2.08
2024-12-08 09:09:37,575 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=72.9 pTM=0.568 ipTM=0.224 tol=1.85
2024-12-08 09:13:44,800 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=72.7 pTM=0.565 ipTM=0.22 tol=1.89
2024-12-08 09:17:51,993 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=72.7 pTM=0.568 ipTM=0.224 tol=2.02
2024-12-08 09:21:59,315 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=72.8 pTM=0.567 ipTM=0.22 tol=2.46
2024-12-08 09:26:06,585 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=72.9 pTM=0.567 ipTM=0.224 tol=2.36
2024-12-08 09:30:13,844 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=72.5 pTM=0.566 ipTM=0.22 tol=2.37
2024-12-08 09:34:21,029 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=72.4 pTM=0.567 ipTM=0.224 tol=2.53
2024-12-08 09:38:28,238 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=72.4 pTM=0.566 ipTM=0.22 tol=2.61
2024-12-08 09:42:35,364 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=72.6 pTM=0.567 ipTM=0.224 tol=2.16
2024-12-08 09:46:42,578 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=72.4 pTM=0.565 ipTM=0.219 tol=1.78
2024-12-08 09:50:49,780 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=72.5 pTM=0.566 ipTM=0.223 tol=2.24
2024-12-08 09:54:57,017 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=72.4 pTM=0.564 ipTM=0.219 tol=2.62
2024-12-08 09:59:04,224 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=72.4 pTM=0.565 ipTM=0.222 tol=2.38
2024-12-08 10:03:11,451 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=72.1 pTM=0.563 ipTM=0.219 tol=2.42
2024-12-08 10:07:18,698 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=72.2 pTM=0.563 ipTM=0.221 tol=2.8
2024-12-08 10:11:25,815 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=72.4 pTM=0.563 ipTM=0.219 tol=2.43
2024-12-08 10:15:32,972 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=72.1 pTM=0.563 ipTM=0.222 tol=1.99
2024-12-08 10:19:40,181 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=72.4 pTM=0.564 ipTM=0.218 tol=1.8
2024-12-08 10:23:47,463 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=72.2 pTM=0.564 ipTM=0.219 tol=2.61
2024-12-08 10:27:54,705 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=72.3 pTM=0.562 ipTM=0.217 tol=3.04
2024-12-08 10:27:54,708 alphafold2_multimer_v3_model_4_seed_000 took 7663.6s (30 recycles)
2024-12-08 10:32:04,977 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=66.6 pTM=0.542 ipTM=0.229
2024-12-08 10:36:12,295 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=69 pTM=0.546 ipTM=0.219 tol=7.07
2024-12-08 10:40:19,522 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=69.5 pTM=0.55 ipTM=0.222 tol=4.12
2024-12-08 10:44:26,747 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=69.4 pTM=0.553 ipTM=0.222 tol=2.92
2024-12-08 10:48:33,888 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=69.7 pTM=0.554 ipTM=0.224 tol=1.52
2024-12-08 10:52:41,054 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=70.1 pTM=0.556 ipTM=0.224 tol=3.24
2024-12-08 10:56:48,121 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=70.6 pTM=0.557 ipTM=0.223 tol=1.32
2024-12-08 11:00:55,257 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=70.9 pTM=0.557 ipTM=0.226 tol=2.47
2024-12-08 11:05:02,402 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=70.9 pTM=0.558 ipTM=0.225 tol=2.52
2024-12-08 11:09:09,503 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=70.8 pTM=0.557 ipTM=0.226 tol=4.87
2024-12-08 11:13:16,585 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=70.9 pTM=0.557 ipTM=0.226 tol=1.2
2024-12-08 11:17:23,782 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=71.2 pTM=0.561 ipTM=0.344 tol=1.36
2024-12-08 11:21:30,960 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=71.2 pTM=0.561 ipTM=0.363 tol=1.2
2024-12-08 11:25:38,043 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=71.1 pTM=0.561 ipTM=0.374 tol=0.822
2024-12-08 11:29:45,066 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=70.9 pTM=0.561 ipTM=0.37 tol=0.894
2024-12-08 11:33:52,113 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=71.1 pTM=0.561 ipTM=0.371 tol=1.3
2024-12-08 11:37:59,207 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=71.1 pTM=0.561 ipTM=0.362 tol=1.09
2024-12-08 11:42:06,285 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=71 pTM=0.562 ipTM=0.365 tol=1.26
2024-12-08 11:46:13,386 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=71.1 pTM=0.562 ipTM=0.361 tol=1.05
2024-12-08 11:50:20,480 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=71.1 pTM=0.562 ipTM=0.377 tol=0.841
2024-12-08 11:54:27,559 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=71 pTM=0.562 ipTM=0.365 tol=0.937
2024-12-08 11:58:34,642 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=70.8 pTM=0.563 ipTM=0.376 tol=0.632
2024-12-08 12:02:41,647 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=71 pTM=0.562 ipTM=0.357 tol=1.19
2024-12-08 12:06:48,610 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=70.9 pTM=0.562 ipTM=0.388 tol=0.926
2024-12-08 12:10:55,633 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=71.1 pTM=0.563 ipTM=0.376 tol=0.928
2024-12-08 12:15:02,642 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=71.2 pTM=0.562 ipTM=0.36 tol=1.14
2024-12-08 12:19:09,616 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=71 pTM=0.562 ipTM=0.365 tol=0.864
2024-12-08 12:23:16,525 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=71.1 pTM=0.562 ipTM=0.358 tol=0.736
2024-12-08 12:27:23,544 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=70.9 pTM=0.562 ipTM=0.344 tol=0.64
2024-12-08 12:31:30,623 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=71.1 pTM=0.563 ipTM=0.337 tol=1.02
2024-12-08 12:35:37,665 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=71.1 pTM=0.563 ipTM=0.328 tol=1.01
2024-12-08 12:35:37,668 alphafold2_multimer_v3_model_5_seed_000 took 7659.8s (30 recycles)
2024-12-08 12:35:40,827 reranking models by 'multimer' metric
2024-12-08 12:35:44,706 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-08 12:47:46,334 Relaxation took 725.5s
2024-12-08 12:47:46,334 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=72.9 pTM=0.613 ipTM=0.357
2024-12-08 12:54:55,135 Relaxation took 428.8s
2024-12-08 12:54:55,136 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=72.2 pTM=0.563 ipTM=0.333
2024-12-08 13:08:17,366 Relaxation took 802.2s
2024-12-08 13:08:17,366 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=71.1 pTM=0.563 ipTM=0.328
2024-12-08 13:16:42,579 Relaxation took 505.2s
2024-12-08 13:16:42,579 rank_004_alphafold2_multimer_v3_model_2_seed_000 pLDDT=73.6 pTM=0.569 ipTM=0.227
2024-12-08 13:24:32,217 Relaxation took 469.6s
2024-12-08 13:24:32,217 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=72.3 pTM=0.562 ipTM=0.217
2024-12-08 13:24:39,069 Done