2024-12-08 02:10:27,264 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-08 02:10:27,620 Running on GPU
2024-12-08 02:10:31,666 Found 6 citations for tools or databases
2024-12-08 02:10:31,666 Query 1/1: RNF126_TAX1BP1 (length 1100)
2024-12-08 02:10:31,988 Sleeping for 8s. Reason: PENDING
2024-12-08 02:10:40,245 Sleeping for 8s. Reason: RUNNING
2024-12-08 02:10:48,497 Sleeping for 10s. Reason: RUNNING
2024-12-08 02:10:58,760 Sleeping for 7s. Reason: RUNNING
2024-12-08 02:11:06,173 Sleeping for 5s. Reason: RUNNING
2024-12-08 02:11:11,428 Sleeping for 9s. Reason: RUNNING
2024-12-08 02:11:20,694 Sleeping for 5s. Reason: RUNNING
2024-12-08 02:11:25,952 Sleeping for 5s. Reason: RUNNING
2024-12-08 02:11:31,207 Sleeping for 9s. Reason: RUNNING
2024-12-08 02:11:40,464 Sleeping for 6s. Reason: RUNNING
2024-12-08 02:11:46,720 Sleeping for 8s. Reason: RUNNING
2024-12-08 02:11:54,981 Sleeping for 7s. Reason: RUNNING
2024-12-08 02:12:02,245 Sleeping for 8s. Reason: RUNNING
2024-12-08 02:12:10,509 Sleeping for 8s. Reason: RUNNING
2024-12-08 02:12:18,766 Sleeping for 9s. Reason: RUNNING
2024-12-08 02:12:28,021 Sleeping for 6s. Reason: RUNNING
2024-12-08 02:12:34,279 Sleeping for 9s. Reason: RUNNING
2024-12-08 02:12:43,548 Sleeping for 5s. Reason: RUNNING
2024-12-08 02:12:49,803 Sleeping for 6s. Reason: PENDING
2024-12-08 02:12:56,068 Sleeping for 8s. Reason: RUNNING
2024-12-08 02:13:04,328 Sleeping for 9s. Reason: RUNNING
2024-12-08 02:13:13,582 Sleeping for 6s. Reason: RUNNING
2024-12-08 02:13:19,842 Sleeping for 7s. Reason: RUNNING
2024-12-08 02:13:27,104 Sleeping for 9s. Reason: RUNNING
2024-12-08 02:13:36,368 Sleeping for 9s. Reason: RUNNING
2024-12-08 02:13:45,634 Sleeping for 8s. Reason: RUNNING
2024-12-08 02:13:56,988 Setting max_seq=508, max_extra_seq=2048
2024-12-08 02:17:09,396 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=51.3 pTM=0.251 ipTM=0.223
2024-12-08 02:17:40,987 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=53.7 pTM=0.296 ipTM=0.349 tol=21
2024-12-08 02:18:12,671 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=52.6 pTM=0.287 ipTM=0.323 tol=10.9
2024-12-08 02:18:44,407 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=52.8 pTM=0.283 ipTM=0.314 tol=7.76
2024-12-08 02:19:16,173 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=52.8 pTM=0.29 ipTM=0.332 tol=5.3
2024-12-08 02:19:47,971 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=52.5 pTM=0.283 ipTM=0.315 tol=3.36
2024-12-08 02:20:19,795 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=53.1 pTM=0.285 ipTM=0.324 tol=3.73
2024-12-08 02:20:51,649 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=52.5 pTM=0.286 ipTM=0.322 tol=3.83
2024-12-08 02:21:23,489 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=52.7 pTM=0.283 ipTM=0.32 tol=3.25
2024-12-08 02:21:55,355 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=52.8 pTM=0.283 ipTM=0.319 tol=3.41
2024-12-08 02:22:27,229 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=52.6 pTM=0.283 ipTM=0.318 tol=2.49
2024-12-08 02:22:59,098 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=52.4 pTM=0.281 ipTM=0.308 tol=2.1
2024-12-08 02:23:30,926 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=52.8 pTM=0.284 ipTM=0.319 tol=2.37
2024-12-08 02:24:02,766 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=52.6 pTM=0.283 ipTM=0.315 tol=2.54
2024-12-08 02:24:34,611 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=52.6 pTM=0.286 ipTM=0.324 tol=3.11
2024-12-08 02:25:06,475 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=52.8 pTM=0.28 ipTM=0.304 tol=5.54
2024-12-08 02:25:38,340 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=53.2 pTM=0.283 ipTM=0.316 tol=4.84
2024-12-08 02:26:10,217 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=52.9 pTM=0.284 ipTM=0.319 tol=1.84
2024-12-08 02:26:42,087 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=52.8 pTM=0.284 ipTM=0.322 tol=2.53
2024-12-08 02:27:13,958 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=52.6 pTM=0.279 ipTM=0.304 tol=2.12
2024-12-08 02:27:45,824 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=53 pTM=0.281 ipTM=0.308 tol=2.8
2024-12-08 02:28:17,691 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=52.8 pTM=0.278 ipTM=0.3 tol=2.54
2024-12-08 02:28:49,584 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=52.7 pTM=0.28 ipTM=0.31 tol=2.39
2024-12-08 02:29:21,454 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=52.9 pTM=0.28 ipTM=0.31 tol=1.91
2024-12-08 02:29:53,345 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=52.7 pTM=0.284 ipTM=0.318 tol=2.89
2024-12-08 02:30:25,228 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=52.6 pTM=0.279 ipTM=0.302 tol=1.78
2024-12-08 02:30:57,105 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=52.6 pTM=0.281 ipTM=0.307 tol=1.91
2024-12-08 02:31:28,979 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=52.5 pTM=0.273 ipTM=0.284 tol=2.09
2024-12-08 02:32:00,838 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=52.8 pTM=0.281 ipTM=0.311 tol=2.19
2024-12-08 02:32:32,685 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=53 pTM=0.284 ipTM=0.319 tol=2.99
2024-12-08 02:33:04,534 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=53.2 pTM=0.281 ipTM=0.318 tol=4.7
2024-12-08 02:33:04,535 alphafold2_multimer_v3_model_1_seed_000 took 1140.8s (30 recycles)
2024-12-08 02:33:37,377 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=51.3 pTM=0.233 ipTM=0.168
2024-12-08 02:34:09,290 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=51.8 pTM=0.232 ipTM=0.166 tol=26
2024-12-08 02:34:41,234 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=53.2 pTM=0.227 ipTM=0.168 tol=12.2
2024-12-08 02:35:13,196 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=53.5 pTM=0.225 ipTM=0.212 tol=8.26
2024-12-08 02:35:45,143 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=53.7 pTM=0.225 ipTM=0.227 tol=8.24
2024-12-08 02:36:17,065 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=53.9 pTM=0.224 ipTM=0.235 tol=8.49
2024-12-08 02:36:48,987 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=53.6 pTM=0.224 ipTM=0.227 tol=6.12
2024-12-08 02:37:20,918 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=53.4 pTM=0.225 ipTM=0.234 tol=8.16
2024-12-08 02:37:52,846 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=53.1 pTM=0.228 ipTM=0.233 tol=7.61
2024-12-08 02:38:24,829 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=53.6 pTM=0.225 ipTM=0.235 tol=5.7
2024-12-08 02:38:56,771 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=53.5 pTM=0.226 ipTM=0.234 tol=7.1
2024-12-08 02:39:28,705 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=53.3 pTM=0.226 ipTM=0.241 tol=4.99
2024-12-08 02:40:00,618 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=53 pTM=0.227 ipTM=0.242 tol=5.01
2024-12-08 02:40:32,525 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=53.2 pTM=0.225 ipTM=0.246 tol=4.1
2024-12-08 02:41:04,399 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=54.4 pTM=0.25 ipTM=0.245 tol=21.6
2024-12-08 02:41:36,275 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=54.7 pTM=0.253 ipTM=0.246 tol=3.71
2024-12-08 02:42:08,147 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=54.3 pTM=0.244 ipTM=0.244 tol=2.76
2024-12-08 02:42:40,035 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=54.3 pTM=0.243 ipTM=0.24 tol=3.82
2024-12-08 02:43:11,906 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=53.7 pTM=0.241 ipTM=0.237 tol=3.95
2024-12-08 02:43:43,772 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=54.2 pTM=0.242 ipTM=0.238 tol=2.46
2024-12-08 02:44:15,628 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=54.1 pTM=0.243 ipTM=0.243 tol=1.83
2024-12-08 02:44:47,500 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=54.3 pTM=0.242 ipTM=0.238 tol=3.14
2024-12-08 02:45:19,370 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=54 pTM=0.242 ipTM=0.236 tol=2.76
2024-12-08 02:45:51,243 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=54.4 pTM=0.24 ipTM=0.235 tol=3.26
2024-12-08 02:46:23,129 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=54 pTM=0.24 ipTM=0.233 tol=3.29
2024-12-08 02:46:55,008 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=54.5 pTM=0.24 ipTM=0.239 tol=2.07
2024-12-08 02:47:26,883 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=54.2 pTM=0.241 ipTM=0.235 tol=1.66
2024-12-08 02:47:58,762 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=54.4 pTM=0.242 ipTM=0.238 tol=2.58
2024-12-08 02:48:30,634 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=53.8 pTM=0.239 ipTM=0.236 tol=2.46
2024-12-08 02:49:02,526 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=54.5 pTM=0.238 ipTM=0.235 tol=3.12
2024-12-08 02:49:34,421 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=54.2 pTM=0.239 ipTM=0.241 tol=2.78
2024-12-08 02:49:34,422 alphafold2_multimer_v3_model_2_seed_000 took 988.9s (30 recycles)
2024-12-08 02:50:07,437 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=49.9 pTM=0.234 ipTM=0.176
2024-12-08 02:50:39,557 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=49.8 pTM=0.257 ipTM=0.247 tol=21.8
2024-12-08 02:51:11,656 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=51.5 pTM=0.277 ipTM=0.316 tol=12.7
2024-12-08 02:51:43,820 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=51.5 pTM=0.274 ipTM=0.303 tol=6.56
2024-12-08 02:52:15,944 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=51.2 pTM=0.271 ipTM=0.295 tol=5.68
2024-12-08 02:52:48,066 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=51.6 pTM=0.275 ipTM=0.307 tol=6.33
2024-12-08 02:53:20,165 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=51.8 pTM=0.274 ipTM=0.299 tol=4.25
2024-12-08 02:53:52,220 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=52.3 pTM=0.274 ipTM=0.294 tol=4.45
2024-12-08 02:54:24,229 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=53.4 pTM=0.275 ipTM=0.29 tol=4.96
2024-12-08 02:54:56,313 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=53.3 pTM=0.277 ipTM=0.307 tol=5.62
2024-12-08 02:55:28,348 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=53 pTM=0.274 ipTM=0.294 tol=5.12
2024-12-08 02:56:00,410 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=52.9 pTM=0.274 ipTM=0.296 tol=3.69
2024-12-08 02:56:32,476 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=53.5 pTM=0.275 ipTM=0.304 tol=3.14
2024-12-08 02:57:04,563 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=53.1 pTM=0.273 ipTM=0.295 tol=5.5
2024-12-08 02:57:36,646 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=53.4 pTM=0.274 ipTM=0.296 tol=2.89
2024-12-08 02:58:08,703 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=53.2 pTM=0.271 ipTM=0.287 tol=3.99
2024-12-08 02:58:40,758 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=53.7 pTM=0.274 ipTM=0.298 tol=4.6
2024-12-08 02:59:12,839 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=53.8 pTM=0.276 ipTM=0.303 tol=5.73
2024-12-08 02:59:44,917 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=53.7 pTM=0.276 ipTM=0.305 tol=1.5
2024-12-08 03:00:16,961 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=53.8 pTM=0.274 ipTM=0.3 tol=1.39
2024-12-08 03:00:48,989 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=53.5 pTM=0.272 ipTM=0.288 tol=1.97
2024-12-08 03:01:21,031 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=53.5 pTM=0.273 ipTM=0.295 tol=2.31
2024-12-08 03:01:53,049 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=53.5 pTM=0.275 ipTM=0.297 tol=2.38
2024-12-08 03:02:25,065 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=53.4 pTM=0.274 ipTM=0.295 tol=1.93
2024-12-08 03:02:57,073 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=53.8 pTM=0.274 ipTM=0.295 tol=1.79
2024-12-08 03:03:29,095 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=53 pTM=0.271 ipTM=0.286 tol=5.36
2024-12-08 03:04:01,122 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=53.5 pTM=0.272 ipTM=0.291 tol=4.75
2024-12-08 03:04:33,157 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=53.2 pTM=0.272 ipTM=0.291 tol=2.02
2024-12-08 03:05:05,197 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=53.4 pTM=0.274 ipTM=0.296 tol=2.01
2024-12-08 03:05:37,236 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=53.5 pTM=0.274 ipTM=0.299 tol=1.92
2024-12-08 03:06:09,249 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=53.6 pTM=0.271 ipTM=0.285 tol=4.02
2024-12-08 03:06:09,250 alphafold2_multimer_v3_model_3_seed_000 took 993.9s (30 recycles)
2024-12-08 03:06:42,361 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=48.6 pTM=0.225 ipTM=0.161
2024-12-08 03:07:14,533 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=47.3 pTM=0.244 ipTM=0.221 tol=21.1
2024-12-08 03:07:46,725 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=47.8 pTM=0.248 ipTM=0.229 tol=8.21
2024-12-08 03:08:18,901 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=48.6 pTM=0.266 ipTM=0.293 tol=13.5
2024-12-08 03:08:51,071 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=48.6 pTM=0.278 ipTM=0.326 tol=8.15
2024-12-08 03:09:23,193 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=49.2 pTM=0.292 ipTM=0.375 tol=9.64
2024-12-08 03:09:55,317 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=49.5 pTM=0.292 ipTM=0.372 tol=7.48
2024-12-08 03:10:27,429 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=49.4 pTM=0.29 ipTM=0.363 tol=8.71
2024-12-08 03:10:59,552 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=48.8 pTM=0.289 ipTM=0.363 tol=4.61
2024-12-08 03:11:31,691 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=49.7 pTM=0.29 ipTM=0.363 tol=5.27
2024-12-08 03:12:03,817 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=49.4 pTM=0.287 ipTM=0.356 tol=5.74
2024-12-08 03:12:35,947 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=50.1 pTM=0.292 ipTM=0.372 tol=4.33
2024-12-08 03:13:08,082 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=49.8 pTM=0.294 ipTM=0.378 tol=3.61
2024-12-08 03:13:40,206 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=49.7 pTM=0.292 ipTM=0.374 tol=6.94
2024-12-08 03:14:12,316 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=49.3 pTM=0.291 ipTM=0.367 tol=5.25
2024-12-08 03:14:44,389 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=50.3 pTM=0.307 ipTM=0.42 tol=5.16
2024-12-08 03:15:16,502 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=49.9 pTM=0.303 ipTM=0.405 tol=5.89
2024-12-08 03:15:48,580 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=50.2 pTM=0.304 ipTM=0.408 tol=4.66
2024-12-08 03:16:20,665 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=49.8 pTM=0.304 ipTM=0.405 tol=4.2
2024-12-08 03:16:52,734 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=50.3 pTM=0.312 ipTM=0.438 tol=5.02
2024-12-08 03:17:24,824 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=50 pTM=0.309 ipTM=0.428 tol=5.59
2024-12-08 03:17:56,897 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=50.5 pTM=0.306 ipTM=0.416 tol=7.02
2024-12-08 03:18:28,943 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=50.1 pTM=0.309 ipTM=0.427 tol=8.91
2024-12-08 03:19:01,008 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=50.2 pTM=0.309 ipTM=0.424 tol=5.34
2024-12-08 03:19:33,072 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=50.2 pTM=0.306 ipTM=0.416 tol=4.77
2024-12-08 03:20:05,116 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=49.8 pTM=0.309 ipTM=0.425 tol=8.13
2024-12-08 03:20:37,172 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=49.7 pTM=0.307 ipTM=0.414 tol=7.45
2024-12-08 03:21:09,216 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=50.5 pTM=0.31 ipTM=0.428 tol=7.81
2024-12-08 03:21:41,289 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=50.2 pTM=0.305 ipTM=0.417 tol=9.79
2024-12-08 03:22:13,366 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=50.3 pTM=0.307 ipTM=0.42 tol=10.6
2024-12-08 03:22:45,429 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=49.9 pTM=0.306 ipTM=0.414 tol=6.68
2024-12-08 03:22:45,430 alphafold2_multimer_v3_model_4_seed_000 took 995.2s (30 recycles)
2024-12-08 03:23:18,454 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=52 pTM=0.232 ipTM=0.175
2024-12-08 03:23:50,504 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=53.1 pTM=0.29 ipTM=0.365 tol=18.9
2024-12-08 03:24:22,589 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=52.8 pTM=0.277 ipTM=0.313 tol=11.1
2024-12-08 03:24:54,661 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=53.9 pTM=0.287 ipTM=0.348 tol=5.37
2024-12-08 03:25:26,743 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=53.7 pTM=0.282 ipTM=0.33 tol=6.44
2024-12-08 03:25:58,821 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=53.8 pTM=0.284 ipTM=0.339 tol=4.27
2024-12-08 03:26:30,883 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=53.9 pTM=0.283 ipTM=0.333 tol=3.41
2024-12-08 03:27:02,933 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=53.7 pTM=0.284 ipTM=0.334 tol=2.97
2024-12-08 03:27:34,984 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=53.4 pTM=0.281 ipTM=0.327 tol=4.67
2024-12-08 03:28:07,173 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=53.8 pTM=0.284 ipTM=0.334 tol=5.14
2024-12-08 03:28:39,500 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=53.7 pTM=0.281 ipTM=0.327 tol=3.14
2024-12-08 03:29:11,818 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=53.7 pTM=0.281 ipTM=0.324 tol=4.37
2024-12-08 03:29:44,073 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=53.4 pTM=0.278 ipTM=0.311 tol=5.5
2024-12-08 03:30:16,278 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=53.9 pTM=0.283 ipTM=0.332 tol=4.78
2024-12-08 03:30:48,429 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=53.5 pTM=0.281 ipTM=0.323 tol=5.43
2024-12-08 03:31:20,566 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=53.6 pTM=0.281 ipTM=0.325 tol=2.97
2024-12-08 03:31:52,673 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=53.7 pTM=0.284 ipTM=0.329 tol=5.3
2024-12-08 03:32:24,780 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=54 pTM=0.285 ipTM=0.331 tol=1.87
2024-12-08 03:32:56,863 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=53.6 pTM=0.285 ipTM=0.334 tol=4.86
2024-12-08 03:33:28,963 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=53.6 pTM=0.284 ipTM=0.333 tol=2.24
2024-12-08 03:34:01,062 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=53.5 pTM=0.28 ipTM=0.319 tol=2.66
2024-12-08 03:34:33,160 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=53.7 pTM=0.283 ipTM=0.33 tol=2.6
2024-12-08 03:35:05,263 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=53.5 pTM=0.282 ipTM=0.324 tol=1.97
2024-12-08 03:35:37,366 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=53.6 pTM=0.285 ipTM=0.332 tol=6.77
2024-12-08 03:36:09,468 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=53.6 pTM=0.282 ipTM=0.325 tol=2.84
2024-12-08 03:36:41,539 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=53.7 pTM=0.285 ipTM=0.333 tol=4.39
2024-12-08 03:37:13,626 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=53.7 pTM=0.282 ipTM=0.326 tol=3.11
2024-12-08 03:37:45,744 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=53.8 pTM=0.284 ipTM=0.332 tol=2.88
2024-12-08 03:38:17,838 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=53.6 pTM=0.283 ipTM=0.328 tol=3.66
2024-12-08 03:38:49,927 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=54 pTM=0.285 ipTM=0.336 tol=3.69
2024-12-08 03:39:22,021 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=53.8 pTM=0.281 ipTM=0.325 tol=2.59
2024-12-08 03:39:22,022 alphafold2_multimer_v3_model_5_seed_000 took 995.6s (30 recycles)
2024-12-08 03:39:22,972 reranking models by 'multimer' metric
2024-12-08 03:39:24,472 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-08 03:42:42,324 Relaxation took 199.4s
2024-12-08 03:42:42,324 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=49.9 pTM=0.306 ipTM=0.414
2024-12-08 03:44:32,910 Relaxation took 110.6s
2024-12-08 03:44:32,911 rank_002_alphafold2_multimer_v3_model_5_seed_000 pLDDT=53.8 pTM=0.281 ipTM=0.325
2024-12-08 03:47:22,842 Relaxation took 169.9s
2024-12-08 03:47:22,842 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=53.2 pTM=0.281 ipTM=0.318
2024-12-08 03:49:02,038 Relaxation took 99.2s
2024-12-08 03:49:02,038 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=53.6 pTM=0.271 ipTM=0.285
2024-12-08 03:51:08,192 Relaxation took 126.2s
2024-12-08 03:51:08,192 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=54.2 pTM=0.239 ipTM=0.241
2024-12-08 03:51:10,698 Done