2024-12-08 02:28:25,484 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-08 02:28:25,802 Running on GPU
2024-12-08 02:28:29,106 Found 6 citations for tools or databases
2024-12-08 02:28:29,106 Query 1/1: RNF130_PTCH1 (length 1866)
2024-12-08 02:28:29,862 Sleeping for 7s. Reason: PENDING
2024-12-08 02:28:37,123 Sleeping for 6s. Reason: RUNNING
2024-12-08 02:28:43,378 Sleeping for 7s. Reason: RUNNING
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2024-12-08 02:29:08,170 Sleeping for 10s. Reason: RUNNING
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2024-12-08 02:29:29,962 Sleeping for 6s. Reason: RUNNING
2024-12-08 02:29:36,219 Sleeping for 9s. Reason: RUNNING
2024-12-08 02:29:45,477 Sleeping for 7s. Reason: RUNNING
2024-12-08 02:29:52,728 Sleeping for 8s. Reason: RUNNING
2024-12-08 02:30:00,992 Sleeping for 5s. Reason: RUNNING
2024-12-08 02:30:06,243 Sleeping for 8s. Reason: RUNNING
2024-12-08 02:30:14,502 Sleeping for 7s. Reason: RUNNING
2024-12-08 02:30:21,755 Sleeping for 6s. Reason: RUNNING
2024-12-08 02:30:28,007 Sleeping for 6s. Reason: RUNNING
2024-12-08 02:30:34,265 Sleeping for 6s. Reason: RUNNING
2024-12-08 02:30:40,529 Sleeping for 7s. Reason: RUNNING
2024-12-08 02:30:47,785 Sleeping for 6s. Reason: RUNNING
2024-12-08 02:30:54,047 Sleeping for 7s. Reason: RUNNING
2024-12-08 02:31:01,306 Sleeping for 6s. Reason: RUNNING
2024-12-08 02:31:07,566 Sleeping for 5s. Reason: RUNNING
2024-12-08 02:31:12,823 Sleeping for 10s. Reason: RUNNING
2024-12-08 02:31:23,086 Sleeping for 7s. Reason: RUNNING
2024-12-08 02:31:30,341 Sleeping for 6s. Reason: RUNNING
2024-12-08 02:31:36,595 Sleeping for 10s. Reason: RUNNING
2024-12-08 02:31:46,851 Sleeping for 7s. Reason: RUNNING
2024-12-08 02:31:54,110 Sleeping for 5s. Reason: RUNNING
2024-12-08 02:31:59,366 Sleeping for 5s. Reason: RUNNING
2024-12-08 02:32:04,616 Sleeping for 9s. Reason: RUNNING
2024-12-08 02:32:13,872 Sleeping for 7s. Reason: RUNNING
2024-12-08 02:32:21,127 Sleeping for 5s. Reason: RUNNING
2024-12-08 02:32:28,210 Sleeping for 8s. Reason: PENDING
2024-12-08 02:32:36,471 Sleeping for 9s. Reason: RUNNING
2024-12-08 02:32:45,742 Sleeping for 5s. Reason: RUNNING
2024-12-08 02:32:51,000 Sleeping for 5s. Reason: RUNNING
2024-12-08 02:32:56,257 Sleeping for 5s. Reason: RUNNING
2024-12-08 02:33:01,513 Sleeping for 5s. Reason: RUNNING
2024-12-08 02:33:06,773 Sleeping for 9s. Reason: RUNNING
2024-12-08 02:33:16,030 Sleeping for 6s. Reason: RUNNING
2024-12-08 02:33:22,297 Sleeping for 6s. Reason: RUNNING
2024-12-08 02:33:28,558 Sleeping for 6s. Reason: RUNNING
2024-12-08 02:33:34,820 Sleeping for 9s. Reason: RUNNING
2024-12-08 02:33:44,087 Sleeping for 7s. Reason: RUNNING
2024-12-08 02:33:51,345 Sleeping for 8s. Reason: RUNNING
2024-12-08 02:33:59,604 Sleeping for 5s. Reason: RUNNING
2024-12-08 02:34:04,858 Sleeping for 9s. Reason: RUNNING
2024-12-08 02:34:19,259 Setting max_seq=508, max_extra_seq=2048
2024-12-08 02:39:04,782 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=62.8 pTM=0.574 ipTM=0.25
2024-12-08 02:41:13,309 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=63.2 pTM=0.589 ipTM=0.27 tol=10.6
2024-12-08 02:43:21,964 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=63.2 pTM=0.59 ipTM=0.273 tol=6.58
2024-12-08 02:45:30,689 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=63.6 pTM=0.593 ipTM=0.273 tol=3.65
2024-12-08 02:47:39,400 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=64.1 pTM=0.597 ipTM=0.269 tol=5.18
2024-12-08 02:49:48,098 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=64.1 pTM=0.595 ipTM=0.264 tol=4.89
2024-12-08 02:51:56,794 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=64.1 pTM=0.597 ipTM=0.272 tol=2.53
2024-12-08 02:54:05,530 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=64.1 pTM=0.597 ipTM=0.267 tol=4.95
2024-12-08 02:56:14,290 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=64.2 pTM=0.595 ipTM=0.264 tol=5.02
2024-12-08 02:58:23,019 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=64.2 pTM=0.597 ipTM=0.264 tol=2.68
2024-12-08 03:00:31,727 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=64.1 pTM=0.598 ipTM=0.268 tol=2.13
2024-12-08 03:02:40,460 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=63.8 pTM=0.597 ipTM=0.269 tol=4.14
2024-12-08 03:04:49,164 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=64.2 pTM=0.598 ipTM=0.268 tol=4.35
2024-12-08 03:06:57,873 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=64.2 pTM=0.598 ipTM=0.262 tol=4.57
2024-12-08 03:09:06,543 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=64.2 pTM=0.597 ipTM=0.261 tol=4.89
2024-12-08 03:11:15,230 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=64.1 pTM=0.597 ipTM=0.264 tol=1.19
2024-12-08 03:13:23,899 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=64.2 pTM=0.597 ipTM=0.261 tol=4.66
2024-12-08 03:15:32,543 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=64.2 pTM=0.599 ipTM=0.264 tol=4.31
2024-12-08 03:17:41,206 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=64.1 pTM=0.597 ipTM=0.258 tol=3.9
2024-12-08 03:19:49,887 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=64.2 pTM=0.599 ipTM=0.263 tol=3.93
2024-12-08 03:21:58,554 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=64.2 pTM=0.601 ipTM=0.267 tol=1.87
2024-12-08 03:24:07,188 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=64.1 pTM=0.6 ipTM=0.27 tol=1.42
2024-12-08 03:26:15,910 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=64.2 pTM=0.598 ipTM=0.26 tol=3.69
2024-12-08 03:28:24,681 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=64.4 pTM=0.6 ipTM=0.261 tol=1.41
2024-12-08 03:30:33,350 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=64.3 pTM=0.601 ipTM=0.264 tol=3.66
2024-12-08 03:32:42,015 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=64.2 pTM=0.6 ipTM=0.267 tol=1.55
2024-12-08 03:34:50,706 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=64.2 pTM=0.601 ipTM=0.268 tol=3.88
2024-12-08 03:36:59,436 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=64.4 pTM=0.601 ipTM=0.266 tol=1.63
2024-12-08 03:39:08,159 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=64.1 pTM=0.598 ipTM=0.261 tol=1.51
2024-12-08 03:41:16,866 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=64.2 pTM=0.598 ipTM=0.259 tol=3.96
2024-12-08 03:43:25,585 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=64.2 pTM=0.6 ipTM=0.259 tol=1.44
2024-12-08 03:43:25,587 alphafold2_multimer_v3_model_1_seed_000 took 4141.4s (30 recycles)
2024-12-08 03:45:36,505 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=62.5 pTM=0.573 ipTM=0.255
2024-12-08 03:47:45,336 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=62.5 pTM=0.576 ipTM=0.25 tol=12.8
2024-12-08 03:49:54,124 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=62.8 pTM=0.577 ipTM=0.251 tol=5.28
2024-12-08 03:52:02,936 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=63 pTM=0.58 ipTM=0.255 tol=2.68
2024-12-08 03:54:11,770 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=63.3 pTM=0.582 ipTM=0.255 tol=3.16
2024-12-08 03:56:20,614 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=63.3 pTM=0.581 ipTM=0.253 tol=3.01
2024-12-08 03:58:29,494 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=63.5 pTM=0.582 ipTM=0.253 tol=1.93
2024-12-08 04:00:38,363 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=63.5 pTM=0.58 ipTM=0.247 tol=2.35
2024-12-08 04:02:47,213 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=63.6 pTM=0.582 ipTM=0.252 tol=2.62
2024-12-08 04:04:56,081 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=63.6 pTM=0.583 ipTM=0.253 tol=1.94
2024-12-08 04:07:04,967 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=63.3 pTM=0.582 ipTM=0.255 tol=1.74
2024-12-08 04:09:13,840 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=63.3 pTM=0.584 ipTM=0.256 tol=2.01
2024-12-08 04:11:22,678 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=63.5 pTM=0.583 ipTM=0.255 tol=2.12
2024-12-08 04:13:31,540 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=63.5 pTM=0.582 ipTM=0.249 tol=1.77
2024-12-08 04:15:40,365 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=63.4 pTM=0.581 ipTM=0.251 tol=1.7
2024-12-08 04:17:49,203 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=63.4 pTM=0.582 ipTM=0.252 tol=1.58
2024-12-08 04:19:58,032 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=63.5 pTM=0.581 ipTM=0.253 tol=1.59
2024-12-08 04:22:06,862 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=63.5 pTM=0.583 ipTM=0.249 tol=1.51
2024-12-08 04:24:15,733 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=63.3 pTM=0.58 ipTM=0.248 tol=2.08
2024-12-08 04:26:24,578 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=63.3 pTM=0.581 ipTM=0.25 tol=2.31
2024-12-08 04:28:33,418 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=63.4 pTM=0.582 ipTM=0.249 tol=1.52
2024-12-08 04:30:42,236 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=63.3 pTM=0.582 ipTM=0.251 tol=1.74
2024-12-08 04:32:51,110 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=63.3 pTM=0.58 ipTM=0.247 tol=2.44
2024-12-08 04:34:59,946 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=63.4 pTM=0.581 ipTM=0.254 tol=1.71
2024-12-08 04:37:08,769 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=63.4 pTM=0.582 ipTM=0.256 tol=2.43
2024-12-08 04:39:17,629 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=63.2 pTM=0.583 ipTM=0.252 tol=1.74
2024-12-08 04:41:26,424 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=63.3 pTM=0.583 ipTM=0.255 tol=1.79
2024-12-08 04:43:35,169 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=63.5 pTM=0.583 ipTM=0.253 tol=1.76
2024-12-08 04:45:43,991 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=63.3 pTM=0.58 ipTM=0.246 tol=2.13
2024-12-08 04:47:52,803 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=63.3 pTM=0.581 ipTM=0.252 tol=2.16
2024-12-08 04:50:01,576 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=63.4 pTM=0.581 ipTM=0.25 tol=1.67
2024-12-08 04:50:01,578 alphafold2_multimer_v3_model_2_seed_000 took 3994.0s (30 recycles)
2024-12-08 04:52:12,443 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=62.9 pTM=0.577 ipTM=0.234
2024-12-08 04:54:21,192 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=62.8 pTM=0.584 ipTM=0.252 tol=8.64
2024-12-08 04:56:29,914 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=63 pTM=0.585 ipTM=0.261 tol=7.94
2024-12-08 04:58:38,634 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=63.1 pTM=0.587 ipTM=0.263 tol=4.91
2024-12-08 05:00:47,325 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=63.4 pTM=0.589 ipTM=0.267 tol=2.86
2024-12-08 05:02:56,072 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=63.3 pTM=0.589 ipTM=0.267 tol=2.57
2024-12-08 05:05:04,790 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=63.3 pTM=0.59 ipTM=0.27 tol=2.4
2024-12-08 05:07:13,511 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=63.4 pTM=0.592 ipTM=0.276 tol=2.23
2024-12-08 05:09:22,208 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=63.4 pTM=0.591 ipTM=0.278 tol=1.8
2024-12-08 05:11:30,876 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=63.5 pTM=0.594 ipTM=0.286 tol=1.77
2024-12-08 05:13:39,571 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=63.4 pTM=0.593 ipTM=0.283 tol=1.66
2024-12-08 05:15:48,264 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=63.5 pTM=0.595 ipTM=0.29 tol=1.3
2024-12-08 05:17:56,973 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=63.5 pTM=0.596 ipTM=0.287 tol=1.33
2024-12-08 05:20:05,659 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=63.5 pTM=0.595 ipTM=0.284 tol=1.67
2024-12-08 05:22:14,379 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=63.2 pTM=0.592 ipTM=0.282 tol=1.97
2024-12-08 05:24:23,054 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=63.3 pTM=0.591 ipTM=0.282 tol=2.51
2024-12-08 05:26:31,703 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=63.4 pTM=0.592 ipTM=0.284 tol=3.08
2024-12-08 05:28:40,402 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=63.4 pTM=0.594 ipTM=0.281 tol=2.44
2024-12-08 05:30:49,128 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=63.4 pTM=0.593 ipTM=0.285 tol=3.16
2024-12-08 05:32:57,907 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=63.5 pTM=0.595 ipTM=0.287 tol=3.07
2024-12-08 05:35:06,619 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=63.5 pTM=0.596 ipTM=0.287 tol=1.65
2024-12-08 05:37:15,295 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=63.5 pTM=0.596 ipTM=0.289 tol=1.16
2024-12-08 05:39:23,981 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=63.3 pTM=0.595 ipTM=0.288 tol=1.19
2024-12-08 05:41:32,652 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=63.6 pTM=0.596 ipTM=0.292 tol=0.869
2024-12-08 05:43:41,316 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=63.5 pTM=0.597 ipTM=0.289 tol=1.21
2024-12-08 05:45:49,997 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=63.5 pTM=0.596 ipTM=0.29 tol=1.01
2024-12-08 05:47:58,686 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=63.3 pTM=0.595 ipTM=0.29 tol=1.17
2024-12-08 05:50:07,392 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=63.6 pTM=0.596 ipTM=0.29 tol=2.8
2024-12-08 05:52:16,122 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=63.4 pTM=0.595 ipTM=0.289 tol=2.59
2024-12-08 05:54:24,800 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=63.4 pTM=0.596 ipTM=0.288 tol=1.1
2024-12-08 05:56:33,485 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=63.4 pTM=0.596 ipTM=0.289 tol=1.64
2024-12-08 05:56:33,487 alphafold2_multimer_v3_model_3_seed_000 took 3989.9s (30 recycles)
2024-12-08 05:58:44,156 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=61.4 pTM=0.576 ipTM=0.277
2024-12-08 06:00:52,800 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=61.8 pTM=0.584 ipTM=0.289 tol=11.9
2024-12-08 06:03:01,484 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=62 pTM=0.582 ipTM=0.283 tol=5.88
2024-12-08 06:05:10,179 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=62.2 pTM=0.584 ipTM=0.282 tol=2.66
2024-12-08 06:07:18,921 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=62.5 pTM=0.585 ipTM=0.28 tol=2.62
2024-12-08 06:09:27,705 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=62.4 pTM=0.584 ipTM=0.28 tol=1.76
2024-12-08 06:11:36,427 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=62.5 pTM=0.585 ipTM=0.284 tol=1.51
2024-12-08 06:13:45,153 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=62.5 pTM=0.585 ipTM=0.284 tol=1.36
2024-12-08 06:15:53,894 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=62.4 pTM=0.585 ipTM=0.282 tol=1.49
2024-12-08 06:18:02,586 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=62.7 pTM=0.587 ipTM=0.281 tol=1.19
2024-12-08 06:20:11,307 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=62.4 pTM=0.586 ipTM=0.28 tol=1.48
2024-12-08 06:22:20,048 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=62.4 pTM=0.585 ipTM=0.281 tol=1.26
2024-12-08 06:24:28,801 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=62.4 pTM=0.585 ipTM=0.277 tol=1.49
2024-12-08 06:26:37,587 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=62.4 pTM=0.585 ipTM=0.277 tol=1.14
2024-12-08 06:28:46,339 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=62.2 pTM=0.583 ipTM=0.279 tol=1.3
2024-12-08 06:30:55,047 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=62.3 pTM=0.585 ipTM=0.278 tol=1.42
2024-12-08 06:33:03,752 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=62.4 pTM=0.585 ipTM=0.28 tol=1.17
2024-12-08 06:35:12,430 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=62.3 pTM=0.584 ipTM=0.28 tol=1.15
2024-12-08 06:37:21,130 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=62.2 pTM=0.585 ipTM=0.28 tol=1.42
2024-12-08 06:39:29,856 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=62.3 pTM=0.585 ipTM=0.281 tol=1.48
2024-12-08 06:41:38,562 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=62.3 pTM=0.584 ipTM=0.273 tol=1.31
2024-12-08 06:43:47,300 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=62.3 pTM=0.584 ipTM=0.274 tol=2.07
2024-12-08 06:45:56,072 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=62.1 pTM=0.582 ipTM=0.275 tol=1.73
2024-12-08 06:48:04,810 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=62.4 pTM=0.584 ipTM=0.277 tol=1.32
2024-12-08 06:50:13,475 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=62.3 pTM=0.584 ipTM=0.276 tol=1.23
2024-12-08 06:52:22,196 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=62.3 pTM=0.585 ipTM=0.279 tol=1.35
2024-12-08 06:54:30,947 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=62.1 pTM=0.583 ipTM=0.277 tol=1.32
2024-12-08 06:56:39,716 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=62.5 pTM=0.585 ipTM=0.275 tol=1.2
2024-12-08 06:58:48,460 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=62.2 pTM=0.583 ipTM=0.273 tol=1.21
2024-12-08 07:00:57,181 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=62.2 pTM=0.585 ipTM=0.279 tol=1.03
2024-12-08 07:03:05,935 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=62.2 pTM=0.583 ipTM=0.279 tol=1.03
2024-12-08 07:03:05,937 alphafold2_multimer_v3_model_4_seed_000 took 3990.4s (30 recycles)
2024-12-08 07:05:16,675 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=61.9 pTM=0.58 ipTM=0.289
2024-12-08 07:07:25,383 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=62.1 pTM=0.583 ipTM=0.303 tol=7.72
2024-12-08 07:09:34,062 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=62.3 pTM=0.582 ipTM=0.302 tol=5.32
2024-12-08 07:11:42,752 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=62.3 pTM=0.585 ipTM=0.302 tol=3.87
2024-12-08 07:13:51,435 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=62.7 pTM=0.587 ipTM=0.299 tol=3.3
2024-12-08 07:16:00,127 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=62.6 pTM=0.585 ipTM=0.294 tol=2.9
2024-12-08 07:18:08,881 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=62.7 pTM=0.589 ipTM=0.295 tol=3.06
2024-12-08 07:20:17,655 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=62.8 pTM=0.587 ipTM=0.292 tol=2.07
2024-12-08 07:22:26,405 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=62.7 pTM=0.586 ipTM=0.283 tol=1.85
2024-12-08 07:24:35,133 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=62.8 pTM=0.586 ipTM=0.284 tol=1.9
2024-12-08 07:26:43,891 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=62.9 pTM=0.587 ipTM=0.281 tol=4.45
2024-12-08 07:28:52,693 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=62.8 pTM=0.587 ipTM=0.284 tol=4.34
2024-12-08 07:31:01,504 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=62.8 pTM=0.588 ipTM=0.287 tol=2.21
2024-12-08 07:33:10,263 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=62.8 pTM=0.587 ipTM=0.284 tol=2.21
2024-12-08 07:35:19,009 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=62.7 pTM=0.588 ipTM=0.292 tol=1.94
2024-12-08 07:37:27,770 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=62.7 pTM=0.586 ipTM=0.293 tol=1.62
2024-12-08 07:39:36,572 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=62.7 pTM=0.586 ipTM=0.294 tol=4.27
2024-12-08 07:41:45,364 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=62.8 pTM=0.586 ipTM=0.289 tol=1.96
2024-12-08 07:43:54,103 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=62.6 pTM=0.585 ipTM=0.291 tol=4.35
2024-12-08 07:46:02,856 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=62.7 pTM=0.585 ipTM=0.286 tol=2.57
2024-12-08 07:48:11,543 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=62.7 pTM=0.587 ipTM=0.286 tol=2.14
2024-12-08 07:50:20,222 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=62.8 pTM=0.586 ipTM=0.283 tol=2.78
2024-12-08 07:52:28,871 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=62.7 pTM=0.586 ipTM=0.279 tol=2.04
2024-12-08 07:54:37,565 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=63 pTM=0.588 ipTM=0.287 tol=4.42
2024-12-08 07:56:46,295 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=62.8 pTM=0.587 ipTM=0.287 tol=4.91
2024-12-08 07:58:55,034 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=62.8 pTM=0.587 ipTM=0.288 tol=2.1
2024-12-08 08:01:03,765 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=62.8 pTM=0.586 ipTM=0.292 tol=4.54
2024-12-08 08:03:12,447 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=62.9 pTM=0.587 ipTM=0.286 tol=1.69
2024-12-08 08:05:21,131 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=62.8 pTM=0.586 ipTM=0.288 tol=1.38
2024-12-08 08:07:29,804 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=62.7 pTM=0.585 ipTM=0.29 tol=1.75
2024-12-08 08:09:38,503 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=62.9 pTM=0.587 ipTM=0.292 tol=2.07
2024-12-08 08:09:38,505 alphafold2_multimer_v3_model_5_seed_000 took 3990.5s (30 recycles)
2024-12-08 08:09:40,550 reranking models by 'multimer' metric
2024-12-08 08:09:43,562 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-08 08:13:15,128 Relaxation took 214.6s
2024-12-08 08:13:15,128 rank_001_alphafold2_multimer_v3_model_5_seed_000 pLDDT=62.9 pTM=0.587 ipTM=0.292
2024-12-08 08:18:26,753 Relaxation took 311.6s
2024-12-08 08:18:26,753 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=63.4 pTM=0.596 ipTM=0.289
2024-12-08 08:22:03,062 Relaxation took 216.3s
2024-12-08 08:22:03,063 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=62.2 pTM=0.583 ipTM=0.279
2024-12-08 08:26:02,059 Relaxation took 239.0s
2024-12-08 08:26:02,059 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=64.2 pTM=0.6 ipTM=0.259
2024-12-08 09:04:06,839 Relaxation took 2284.8s
2024-12-08 09:04:06,839 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=63.4 pTM=0.581 ipTM=0.25
2024-12-08 09:04:11,484 Done