2024-12-08 03:06:15,618 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-08 03:06:15,936 Running on GPU
2024-12-08 03:06:19,279 Found 6 citations for tools or databases
2024-12-08 03:06:19,279 Query 1/1: RNF138_TNFRSF1A (length 700)
2024-12-08 03:06:19,655 Sleeping for 5s. Reason: PENDING
2024-12-08 03:06:24,915 Sleeping for 10s. Reason: RUNNING
2024-12-08 03:06:35,176 Sleeping for 6s. Reason: RUNNING
2024-12-08 03:06:41,430 Sleeping for 7s. Reason: RUNNING
2024-12-08 03:06:48,691 Sleeping for 7s. Reason: RUNNING
2024-12-08 03:06:55,950 Sleeping for 10s. Reason: RUNNING
2024-12-08 03:07:06,207 Sleeping for 9s. Reason: RUNNING
2024-12-08 03:07:15,472 Sleeping for 9s. Reason: RUNNING
2024-12-08 03:07:24,729 Sleeping for 7s. Reason: RUNNING
2024-12-08 03:07:31,982 Sleeping for 10s. Reason: RUNNING
2024-12-08 03:07:42,240 Sleeping for 9s. Reason: RUNNING
2024-12-08 03:07:51,498 Sleeping for 10s. Reason: RUNNING
2024-12-08 03:08:01,761 Sleeping for 8s. Reason: RUNNING
2024-12-08 03:08:10,015 Sleeping for 7s. Reason: RUNNING
2024-12-08 03:08:18,822 Sleeping for 5s. Reason: PENDING
2024-12-08 03:08:24,074 Sleeping for 7s. Reason: RUNNING
2024-12-08 03:08:31,330 Sleeping for 10s. Reason: RUNNING
2024-12-08 03:08:41,586 Sleeping for 10s. Reason: RUNNING
2024-12-08 03:08:51,844 Sleeping for 9s. Reason: RUNNING
2024-12-08 03:09:01,100 Sleeping for 8s. Reason: RUNNING
2024-12-08 03:09:09,354 Sleeping for 7s. Reason: RUNNING
2024-12-08 03:09:16,610 Sleeping for 8s. Reason: RUNNING
2024-12-08 03:09:27,025 Setting max_seq=508, max_extra_seq=2048
2024-12-08 03:11:45,101 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=55 pTM=0.276 ipTM=0.148
2024-12-08 03:11:54,865 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=54.9 pTM=0.303 ipTM=0.173 tol=10.9
2024-12-08 03:12:04,656 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=55.2 pTM=0.31 ipTM=0.205 tol=9.63
2024-12-08 03:12:14,456 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=55.5 pTM=0.319 ipTM=0.228 tol=8.38
2024-12-08 03:12:24,251 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=55.2 pTM=0.317 ipTM=0.222 tol=2.47
2024-12-08 03:12:34,046 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=55.9 pTM=0.336 ipTM=0.279 tol=2.9
2024-12-08 03:12:43,840 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=56.6 pTM=0.348 ipTM=0.308 tol=2.12
2024-12-08 03:12:53,639 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=59.9 pTM=0.397 ipTM=0.444 tol=2.79
2024-12-08 03:13:03,438 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=60.8 pTM=0.405 ipTM=0.464 tol=2.69
2024-12-08 03:13:13,262 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=61.5 pTM=0.412 ipTM=0.477 tol=3.2
2024-12-08 03:13:23,083 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=61.4 pTM=0.41 ipTM=0.475 tol=2.22
2024-12-08 03:13:32,902 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=61.4 pTM=0.411 ipTM=0.476 tol=2.16
2024-12-08 03:13:42,719 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=61.4 pTM=0.412 ipTM=0.476 tol=1.9
2024-12-08 03:13:52,559 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=61.4 pTM=0.411 ipTM=0.475 tol=2
2024-12-08 03:14:02,374 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=61.4 pTM=0.41 ipTM=0.473 tol=1.63
2024-12-08 03:14:12,193 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=61.3 pTM=0.411 ipTM=0.473 tol=1.55
2024-12-08 03:14:22,032 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=61.3 pTM=0.413 ipTM=0.475 tol=1.55
2024-12-08 03:14:31,849 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=61.1 pTM=0.413 ipTM=0.474 tol=1.05
2024-12-08 03:14:41,685 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=61 pTM=0.413 ipTM=0.475 tol=1.31
2024-12-08 03:14:51,518 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=61.1 pTM=0.412 ipTM=0.474 tol=2.06
2024-12-08 03:15:01,337 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=61.3 pTM=0.414 ipTM=0.478 tol=1.47
2024-12-08 03:15:11,153 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=61.3 pTM=0.415 ipTM=0.478 tol=1.23
2024-12-08 03:15:20,971 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=61.3 pTM=0.412 ipTM=0.476 tol=1.79
2024-12-08 03:15:30,805 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=61.4 pTM=0.414 ipTM=0.477 tol=1.35
2024-12-08 03:15:40,623 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=61.2 pTM=0.413 ipTM=0.476 tol=1.24
2024-12-08 03:15:50,458 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=61.4 pTM=0.414 ipTM=0.475 tol=1.39
2024-12-08 03:16:00,276 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=61.2 pTM=0.414 ipTM=0.479 tol=1.8
2024-12-08 03:16:10,091 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=61.3 pTM=0.414 ipTM=0.476 tol=2.05
2024-12-08 03:16:19,911 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=61.2 pTM=0.415 ipTM=0.478 tol=2.66
2024-12-08 03:16:29,725 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=61.4 pTM=0.415 ipTM=0.479 tol=2.72
2024-12-08 03:16:39,544 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=61.3 pTM=0.415 ipTM=0.48 tol=1.71
2024-12-08 03:16:39,544 alphafold2_multimer_v3_model_1_seed_000 took 427.4s (30 recycles)
2024-12-08 03:16:49,683 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=54.5 pTM=0.316 ipTM=0.216
2024-12-08 03:16:59,530 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=55 pTM=0.311 ipTM=0.187 tol=7.77
2024-12-08 03:17:09,381 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=55.4 pTM=0.31 ipTM=0.188 tol=5.21
2024-12-08 03:17:19,242 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=55.4 pTM=0.311 ipTM=0.191 tol=3.24
2024-12-08 03:17:29,097 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=56.1 pTM=0.307 ipTM=0.182 tol=3.08
2024-12-08 03:17:38,959 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=56.1 pTM=0.307 ipTM=0.179 tol=3.78
2024-12-08 03:17:48,813 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=56.3 pTM=0.307 ipTM=0.18 tol=3.62
2024-12-08 03:17:58,675 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=56.2 pTM=0.308 ipTM=0.182 tol=4.09
2024-12-08 03:18:08,526 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=56.6 pTM=0.306 ipTM=0.179 tol=3.16
2024-12-08 03:18:18,382 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=56.1 pTM=0.308 ipTM=0.181 tol=4.4
2024-12-08 03:18:28,239 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=55.7 pTM=0.309 ipTM=0.185 tol=5.56
2024-12-08 03:18:38,099 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=55.9 pTM=0.31 ipTM=0.187 tol=6.34
2024-12-08 03:18:47,953 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=56.1 pTM=0.31 ipTM=0.189 tol=6.84
2024-12-08 03:18:57,813 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=56 pTM=0.315 ipTM=0.2 tol=5.14
2024-12-08 03:19:07,669 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=56.3 pTM=0.306 ipTM=0.181 tol=3.46
2024-12-08 03:19:17,527 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=56.2 pTM=0.312 ipTM=0.197 tol=2.07
2024-12-08 03:19:27,389 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=56.5 pTM=0.307 ipTM=0.183 tol=2.81
2024-12-08 03:19:37,246 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=55.6 pTM=0.313 ipTM=0.196 tol=3.71
2024-12-08 03:19:47,122 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=55.8 pTM=0.308 ipTM=0.184 tol=3.28
2024-12-08 03:19:56,974 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=55.9 pTM=0.312 ipTM=0.195 tol=3.79
2024-12-08 03:20:06,830 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=56.4 pTM=0.305 ipTM=0.182 tol=2.74
2024-12-08 03:20:16,687 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=56.3 pTM=0.311 ipTM=0.192 tol=1.72
2024-12-08 03:20:26,547 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=56.1 pTM=0.306 ipTM=0.184 tol=1.91
2024-12-08 03:20:36,407 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=56.5 pTM=0.314 ipTM=0.201 tol=4.52
2024-12-08 03:20:46,262 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=56.7 pTM=0.304 ipTM=0.179 tol=3.94
2024-12-08 03:20:56,121 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=56.5 pTM=0.313 ipTM=0.196 tol=3.52
2024-12-08 03:21:05,978 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=56.6 pTM=0.304 ipTM=0.179 tol=3.52
2024-12-08 03:21:15,834 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=56.5 pTM=0.311 ipTM=0.192 tol=4.18
2024-12-08 03:21:25,689 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=56.4 pTM=0.306 ipTM=0.183 tol=2.21
2024-12-08 03:21:35,546 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=56.4 pTM=0.314 ipTM=0.199 tol=1.82
2024-12-08 03:21:45,404 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=56.6 pTM=0.305 ipTM=0.178 tol=1.96
2024-12-08 03:21:45,404 alphafold2_multimer_v3_model_2_seed_000 took 305.5s (30 recycles)
2024-12-08 03:21:55,578 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=51.8 pTM=0.325 ipTM=0.248
2024-12-08 03:22:05,455 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=51.8 pTM=0.305 ipTM=0.186 tol=14.6
2024-12-08 03:22:15,336 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=51.7 pTM=0.307 ipTM=0.185 tol=9.38
2024-12-08 03:22:25,212 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=51.3 pTM=0.307 ipTM=0.183 tol=7.77
2024-12-08 03:22:35,074 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=51.4 pTM=0.314 ipTM=0.209 tol=6.48
2024-12-08 03:22:44,944 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=51 pTM=0.302 ipTM=0.178 tol=5.27
2024-12-08 03:22:54,818 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=51.6 pTM=0.307 ipTM=0.187 tol=3.92
2024-12-08 03:23:04,692 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=51.7 pTM=0.303 ipTM=0.178 tol=2.44
2024-12-08 03:23:14,568 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=52 pTM=0.304 ipTM=0.182 tol=2.29
2024-12-08 03:23:24,445 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=52.1 pTM=0.306 ipTM=0.179 tol=3.47
2024-12-08 03:23:34,322 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=51.8 pTM=0.305 ipTM=0.182 tol=2.86
2024-12-08 03:23:44,203 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=51.9 pTM=0.306 ipTM=0.179 tol=3.54
2024-12-08 03:23:54,076 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=52 pTM=0.308 ipTM=0.189 tol=2.75
2024-12-08 03:24:03,960 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=52.1 pTM=0.307 ipTM=0.182 tol=2.65
2024-12-08 03:24:13,830 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=51.9 pTM=0.311 ipTM=0.197 tol=5.87
2024-12-08 03:24:23,709 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=52 pTM=0.307 ipTM=0.187 tol=4.07
2024-12-08 03:24:33,587 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=51.5 pTM=0.311 ipTM=0.193 tol=5.25
2024-12-08 03:24:43,465 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=51.8 pTM=0.31 ipTM=0.19 tol=5.52
2024-12-08 03:24:53,350 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=52.1 pTM=0.31 ipTM=0.191 tol=4.11
2024-12-08 03:25:03,231 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=51.4 pTM=0.306 ipTM=0.183 tol=4.48
2024-12-08 03:25:13,119 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=52.2 pTM=0.308 ipTM=0.186 tol=3.47
2024-12-08 03:25:22,994 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=51.8 pTM=0.309 ipTM=0.192 tol=3.27
2024-12-08 03:25:32,864 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=51.9 pTM=0.308 ipTM=0.192 tol=1.63
2024-12-08 03:25:42,742 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=52 pTM=0.308 ipTM=0.187 tol=1.49
2024-12-08 03:25:52,619 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=52.1 pTM=0.308 ipTM=0.187 tol=2.52
2024-12-08 03:26:02,502 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=51.9 pTM=0.312 ipTM=0.195 tol=2.42
2024-12-08 03:26:12,398 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=52.1 pTM=0.307 ipTM=0.187 tol=2.73
2024-12-08 03:26:22,283 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=51.9 pTM=0.313 ipTM=0.201 tol=2.14
2024-12-08 03:26:32,187 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=52 pTM=0.31 ipTM=0.189 tol=2.07
2024-12-08 03:26:42,085 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=51.9 pTM=0.31 ipTM=0.193 tol=1.67
2024-12-08 03:26:51,982 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=51.9 pTM=0.307 ipTM=0.186 tol=1.75
2024-12-08 03:26:51,983 alphafold2_multimer_v3_model_3_seed_000 took 306.3s (30 recycles)
2024-12-08 03:27:02,151 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=54 pTM=0.388 ipTM=0.389
2024-12-08 03:27:12,033 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=53.3 pTM=0.367 ipTM=0.36 tol=11.9
2024-12-08 03:27:21,926 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=52.1 pTM=0.319 ipTM=0.222 tol=6.36
2024-12-08 03:27:31,800 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=51 pTM=0.322 ipTM=0.22 tol=9.92
2024-12-08 03:27:41,691 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=51.2 pTM=0.315 ipTM=0.203 tol=7.03
2024-12-08 03:27:51,564 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=51 pTM=0.317 ipTM=0.208 tol=4.75
2024-12-08 03:28:01,429 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=50.9 pTM=0.317 ipTM=0.205 tol=9.77
2024-12-08 03:28:11,302 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=50.5 pTM=0.317 ipTM=0.204 tol=7.09
2024-12-08 03:28:21,173 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=50.8 pTM=0.318 ipTM=0.208 tol=6.46
2024-12-08 03:28:31,050 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=50.9 pTM=0.317 ipTM=0.205 tol=5.96
2024-12-08 03:28:40,921 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=50.9 pTM=0.319 ipTM=0.208 tol=5.61
2024-12-08 03:28:50,787 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=50.7 pTM=0.318 ipTM=0.208 tol=6.46
2024-12-08 03:29:00,647 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=50.3 pTM=0.318 ipTM=0.21 tol=6.5
2024-12-08 03:29:10,504 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=51.1 pTM=0.317 ipTM=0.207 tol=5.65
2024-12-08 03:29:20,351 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=50.7 pTM=0.318 ipTM=0.208 tol=9.16
2024-12-08 03:29:30,194 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=50.8 pTM=0.32 ipTM=0.211 tol=9.34
2024-12-08 03:29:40,046 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=51 pTM=0.32 ipTM=0.21 tol=7.73
2024-12-08 03:29:49,904 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=50.6 pTM=0.319 ipTM=0.212 tol=8.55
2024-12-08 03:29:59,764 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=50.6 pTM=0.318 ipTM=0.209 tol=8.05
2024-12-08 03:30:09,618 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=50.8 pTM=0.318 ipTM=0.21 tol=6.3
2024-12-08 03:30:19,473 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=50.6 pTM=0.316 ipTM=0.208 tol=7.13
2024-12-08 03:30:29,317 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=50.6 pTM=0.317 ipTM=0.208 tol=6.15
2024-12-08 03:30:39,168 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=50.6 pTM=0.316 ipTM=0.208 tol=7.16
2024-12-08 03:30:49,035 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=50.9 pTM=0.316 ipTM=0.208 tol=7.52
2024-12-08 03:30:58,881 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=50.8 pTM=0.318 ipTM=0.211 tol=8.11
2024-12-08 03:31:08,746 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=51 pTM=0.319 ipTM=0.211 tol=8.01
2024-12-08 03:31:18,599 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=50.6 pTM=0.318 ipTM=0.213 tol=7.81
2024-12-08 03:31:28,454 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=50.5 pTM=0.318 ipTM=0.215 tol=3.27
2024-12-08 03:31:38,320 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=50.5 pTM=0.318 ipTM=0.207 tol=3.96
2024-12-08 03:31:48,165 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=50.8 pTM=0.32 ipTM=0.232 tol=7.97
2024-12-08 03:31:58,011 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=50.2 pTM=0.317 ipTM=0.21 tol=7.68
2024-12-08 03:31:58,012 alphafold2_multimer_v3_model_4_seed_000 took 305.7s (30 recycles)
2024-12-08 03:32:08,207 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=52.7 pTM=0.365 ipTM=0.339
2024-12-08 03:32:18,083 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=51.8 pTM=0.324 ipTM=0.22 tol=11.5
2024-12-08 03:32:27,966 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=50.9 pTM=0.324 ipTM=0.218 tol=6.04
2024-12-08 03:32:37,842 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=51.2 pTM=0.321 ipTM=0.206 tol=6.02
2024-12-08 03:32:47,722 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=51.1 pTM=0.32 ipTM=0.208 tol=6.13
2024-12-08 03:32:57,591 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=50.8 pTM=0.324 ipTM=0.219 tol=5.94
2024-12-08 03:33:07,473 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=51.3 pTM=0.321 ipTM=0.205 tol=2.87
2024-12-08 03:33:17,351 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=51 pTM=0.327 ipTM=0.224 tol=3.4
2024-12-08 03:33:27,228 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=51.1 pTM=0.318 ipTM=0.202 tol=2.3
2024-12-08 03:33:37,101 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=51.4 pTM=0.331 ipTM=0.234 tol=2.66
2024-12-08 03:33:46,979 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=51.2 pTM=0.318 ipTM=0.203 tol=2.6
2024-12-08 03:33:56,854 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=51.4 pTM=0.34 ipTM=0.259 tol=3.6
2024-12-08 03:34:06,743 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=51.3 pTM=0.316 ipTM=0.199 tol=5.82
2024-12-08 03:34:16,630 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=51.3 pTM=0.336 ipTM=0.25 tol=2
2024-12-08 03:34:26,513 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=51.2 pTM=0.32 ipTM=0.209 tol=5.51
2024-12-08 03:34:36,402 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=51 pTM=0.336 ipTM=0.249 tol=2.33
2024-12-08 03:34:46,308 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=51.4 pTM=0.319 ipTM=0.203 tol=2.73
2024-12-08 03:34:56,194 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=51 pTM=0.333 ipTM=0.24 tol=3.22
2024-12-08 03:35:06,092 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=50.9 pTM=0.323 ipTM=0.215 tol=5.51
2024-12-08 03:35:15,967 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=51.1 pTM=0.335 ipTM=0.246 tol=2.48
2024-12-08 03:35:25,861 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=51.4 pTM=0.317 ipTM=0.201 tol=5.4
2024-12-08 03:35:35,767 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=51 pTM=0.327 ipTM=0.227 tol=3.14
2024-12-08 03:35:45,647 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=50.9 pTM=0.327 ipTM=0.227 tol=2.77
2024-12-08 03:35:55,548 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=51.2 pTM=0.333 ipTM=0.247 tol=2.33
2024-12-08 03:36:05,455 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=51.1 pTM=0.323 ipTM=0.217 tol=2.88
2024-12-08 03:36:15,352 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=50.9 pTM=0.324 ipTM=0.217 tol=3.63
2024-12-08 03:36:25,233 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=50.7 pTM=0.323 ipTM=0.219 tol=4.45
2024-12-08 03:36:35,120 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=50.8 pTM=0.327 ipTM=0.227 tol=2.91
2024-12-08 03:36:45,022 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=50.8 pTM=0.322 ipTM=0.213 tol=4.99
2024-12-08 03:36:54,909 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=50.8 pTM=0.32 ipTM=0.207 tol=3.04
2024-12-08 03:37:04,800 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=50.8 pTM=0.325 ipTM=0.221 tol=4.76
2024-12-08 03:37:04,801 alphafold2_multimer_v3_model_5_seed_000 took 306.5s (30 recycles)
2024-12-08 03:37:05,114 reranking models by 'multimer' metric
2024-12-08 03:37:08,024 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-08 03:37:49,007 Relaxation took 43.9s
2024-12-08 03:37:49,007 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=61.3 pTM=0.415 ipTM=0.48
2024-12-08 03:39:00,846 Relaxation took 71.8s
2024-12-08 03:39:00,846 rank_002_alphafold2_multimer_v3_model_5_seed_000 pLDDT=50.8 pTM=0.325 ipTM=0.221
2024-12-08 03:39:52,100 Relaxation took 51.3s
2024-12-08 03:39:52,100 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=50.2 pTM=0.317 ipTM=0.21
2024-12-08 03:40:37,169 Relaxation took 45.1s
2024-12-08 03:40:37,169 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=51.9 pTM=0.307 ipTM=0.186
2024-12-08 03:41:36,175 Relaxation took 59.0s
2024-12-08 03:41:36,176 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=56.6 pTM=0.305 ipTM=0.178
2024-12-08 03:41:37,444 Done