2024-12-08 03:15:48,916 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-08 03:15:50,556 Running on GPU
2024-12-08 03:15:54,839 Found 6 citations for tools or databases
2024-12-08 03:15:54,839 Query 1/1: RNF13_LGALS1 (length 516)
2024-12-08 03:15:55,145 Sleeping for 7s. Reason: PENDING
2024-12-08 03:16:02,417 Sleeping for 5s. Reason: RUNNING
2024-12-08 03:16:07,679 Sleeping for 9s. Reason: RUNNING
2024-12-08 03:16:16,941 Sleeping for 8s. Reason: RUNNING
2024-12-08 03:16:25,205 Sleeping for 5s. Reason: RUNNING
2024-12-08 03:16:30,465 Sleeping for 8s. Reason: RUNNING
2024-12-08 03:16:38,729 Sleeping for 8s. Reason: RUNNING
2024-12-08 03:16:47,158 Sleeping for 6s. Reason: RUNNING
2024-12-08 03:16:53,413 Sleeping for 5s. Reason: RUNNING
2024-12-08 03:16:58,673 Sleeping for 8s. Reason: RUNNING
2024-12-08 03:17:06,938 Sleeping for 5s. Reason: RUNNING
2024-12-08 03:17:12,235 Sleeping for 8s. Reason: RUNNING
2024-12-08 03:17:22,323 Sleeping for 5s. Reason: PENDING
2024-12-08 03:17:27,577 Sleeping for 7s. Reason: RUNNING
2024-12-08 03:17:34,836 Sleeping for 6s. Reason: RUNNING
2024-12-08 03:17:41,091 Sleeping for 8s. Reason: RUNNING
2024-12-08 03:17:49,347 Sleeping for 8s. Reason: RUNNING
2024-12-08 03:17:57,608 Sleeping for 6s. Reason: RUNNING
2024-12-08 03:18:03,864 Sleeping for 9s. Reason: RUNNING
2024-12-08 03:18:16,521 Setting max_seq=508, max_extra_seq=2048
2024-12-08 03:21:38,763 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=69.4 pTM=0.379 ipTM=0.326
2024-12-08 03:21:46,844 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=71.8 pTM=0.367 ipTM=0.283 tol=5.62
2024-12-08 03:21:54,926 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=72.2 pTM=0.368 ipTM=0.208 tol=4
2024-12-08 03:22:03,010 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=72.6 pTM=0.364 ipTM=0.187 tol=1.69
2024-12-08 03:22:11,092 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=72.9 pTM=0.364 ipTM=0.195 tol=1.13
2024-12-08 03:22:19,178 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=73.1 pTM=0.367 ipTM=0.206 tol=1.2
2024-12-08 03:22:27,264 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=72.9 pTM=0.365 ipTM=0.196 tol=1.7
2024-12-08 03:22:35,348 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=72.9 pTM=0.367 ipTM=0.197 tol=0.948
2024-12-08 03:22:43,436 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=72.9 pTM=0.364 ipTM=0.208 tol=1.15
2024-12-08 03:22:51,528 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=73 pTM=0.365 ipTM=0.203 tol=1.16
2024-12-08 03:22:59,621 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=72.9 pTM=0.365 ipTM=0.18 tol=1.34
2024-12-08 03:23:07,710 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=73.1 pTM=0.365 ipTM=0.178 tol=0.903
2024-12-08 03:23:15,796 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=72.8 pTM=0.367 ipTM=0.166 tol=1.31
2024-12-08 03:23:23,884 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=72.9 pTM=0.371 ipTM=0.167 tol=1.48
2024-12-08 03:23:31,974 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=72.9 pTM=0.368 ipTM=0.184 tol=0.878
2024-12-08 03:23:40,062 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=72.8 pTM=0.368 ipTM=0.182 tol=1.14
2024-12-08 03:23:48,152 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=72.9 pTM=0.366 ipTM=0.186 tol=1.19
2024-12-08 03:23:56,236 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=73 pTM=0.369 ipTM=0.197 tol=0.896
2024-12-08 03:24:04,324 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=73.1 pTM=0.365 ipTM=0.173 tol=2.03
2024-12-08 03:24:12,410 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=72.8 pTM=0.365 ipTM=0.175 tol=1.13
2024-12-08 03:24:20,500 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=72.8 pTM=0.364 ipTM=0.189 tol=0.695
2024-12-08 03:24:28,584 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=72.8 pTM=0.367 ipTM=0.18 tol=2.03
2024-12-08 03:24:36,674 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=72.9 pTM=0.365 ipTM=0.168 tol=1.53
2024-12-08 03:24:44,764 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=72.9 pTM=0.364 ipTM=0.175 tol=0.954
2024-12-08 03:24:52,852 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=72.5 pTM=0.365 ipTM=0.166 tol=0.795
2024-12-08 03:25:00,938 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=72.9 pTM=0.364 ipTM=0.169 tol=1.77
2024-12-08 03:25:09,024 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=72.8 pTM=0.361 ipTM=0.188 tol=1.7
2024-12-08 03:25:17,108 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=72.6 pTM=0.365 ipTM=0.18 tol=1.3
2024-12-08 03:25:25,195 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=72.9 pTM=0.365 ipTM=0.189 tol=1.61
2024-12-08 03:25:33,281 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=72.9 pTM=0.367 ipTM=0.196 tol=1.25
2024-12-08 03:25:41,368 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=72.9 pTM=0.365 ipTM=0.179 tol=1.4
2024-12-08 03:25:41,368 alphafold2_multimer_v3_model_1_seed_000 took 423.9s (30 recycles)
2024-12-08 03:25:49,689 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=68.2 pTM=0.38 ipTM=0.188
2024-12-08 03:25:57,779 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=71 pTM=0.378 ipTM=0.179 tol=22.1
2024-12-08 03:26:05,873 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=71.9 pTM=0.388 ipTM=0.227 tol=3.61
2024-12-08 03:26:13,970 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=72.6 pTM=0.382 ipTM=0.267 tol=2.38
2024-12-08 03:26:22,063 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=73 pTM=0.386 ipTM=0.344 tol=1.45
2024-12-08 03:26:30,156 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=73.4 pTM=0.39 ipTM=0.355 tol=1.35
2024-12-08 03:26:38,250 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=73.4 pTM=0.392 ipTM=0.387 tol=2.14
2024-12-08 03:26:46,343 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=73.4 pTM=0.392 ipTM=0.38 tol=1.36
2024-12-08 03:26:54,436 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=73.4 pTM=0.39 ipTM=0.386 tol=0.837
2024-12-08 03:27:02,529 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=73.6 pTM=0.391 ipTM=0.4 tol=0.653
2024-12-08 03:27:10,624 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=73.6 pTM=0.394 ipTM=0.382 tol=1
2024-12-08 03:27:18,717 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=73.8 pTM=0.394 ipTM=0.385 tol=2.05
2024-12-08 03:27:26,812 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=73.3 pTM=0.398 ipTM=0.349 tol=2.66
2024-12-08 03:27:34,907 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=73.5 pTM=0.397 ipTM=0.366 tol=1.17
2024-12-08 03:27:42,996 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=73.4 pTM=0.396 ipTM=0.38 tol=1.07
2024-12-08 03:27:51,087 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=73.2 pTM=0.392 ipTM=0.36 tol=0.94
2024-12-08 03:27:59,184 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=73.1 pTM=0.393 ipTM=0.35 tol=0.672
2024-12-08 03:28:07,280 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=73.1 pTM=0.394 ipTM=0.373 tol=0.763
2024-12-08 03:28:15,373 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=73.2 pTM=0.396 ipTM=0.313 tol=1.43
2024-12-08 03:28:23,465 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=73.1 pTM=0.393 ipTM=0.36 tol=1.53
2024-12-08 03:28:31,559 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=73.1 pTM=0.389 ipTM=0.354 tol=1.02
2024-12-08 03:28:39,646 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=73 pTM=0.391 ipTM=0.388 tol=1.38
2024-12-08 03:28:47,740 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=73.2 pTM=0.392 ipTM=0.346 tol=1.08
2024-12-08 03:28:55,831 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=73.2 pTM=0.394 ipTM=0.409 tol=0.791
2024-12-08 03:29:03,926 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=73 pTM=0.393 ipTM=0.342 tol=0.608
2024-12-08 03:29:12,020 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=73.2 pTM=0.393 ipTM=0.437 tol=0.922
2024-12-08 03:29:20,111 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=73.2 pTM=0.39 ipTM=0.365 tol=0.994
2024-12-08 03:29:28,204 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=73.2 pTM=0.396 ipTM=0.388 tol=1.17
2024-12-08 03:29:36,301 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=73.2 pTM=0.394 ipTM=0.342 tol=1.61
2024-12-08 03:29:44,397 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=73.2 pTM=0.392 ipTM=0.39 tol=1.38
2024-12-08 03:29:52,489 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=72.9 pTM=0.386 ipTM=0.31 tol=1.31
2024-12-08 03:29:52,489 alphafold2_multimer_v3_model_2_seed_000 took 250.9s (30 recycles)
2024-12-08 03:30:00,820 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=67.6 pTM=0.408 ipTM=0.32
2024-12-08 03:30:08,909 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=69.2 pTM=0.365 ipTM=0.102 tol=10.1
2024-12-08 03:30:16,995 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=70.2 pTM=0.38 ipTM=0.145 tol=7.78
2024-12-08 03:30:25,087 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=70.6 pTM=0.375 ipTM=0.113 tol=3.03
2024-12-08 03:30:33,171 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=70.9 pTM=0.388 ipTM=0.156 tol=7.44
2024-12-08 03:30:41,265 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=71.1 pTM=0.382 ipTM=0.127 tol=3.85
2024-12-08 03:30:49,351 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=70.7 pTM=0.39 ipTM=0.163 tol=3.49
2024-12-08 03:30:57,445 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=70.8 pTM=0.386 ipTM=0.134 tol=2.65
2024-12-08 03:31:05,535 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=70.7 pTM=0.39 ipTM=0.165 tol=3.06
2024-12-08 03:31:13,630 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=71.4 pTM=0.385 ipTM=0.136 tol=3.8
2024-12-08 03:31:21,719 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=71.1 pTM=0.393 ipTM=0.171 tol=2.1
2024-12-08 03:31:29,810 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=71.6 pTM=0.385 ipTM=0.129 tol=1.87
2024-12-08 03:31:37,898 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=71.1 pTM=0.393 ipTM=0.163 tol=2.23
2024-12-08 03:31:45,991 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=71.4 pTM=0.389 ipTM=0.141 tol=2.52
2024-12-08 03:31:54,081 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=71.3 pTM=0.391 ipTM=0.153 tol=1.94
2024-12-08 03:32:02,176 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=71.4 pTM=0.39 ipTM=0.137 tol=1.67
2024-12-08 03:32:10,269 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=71.2 pTM=0.393 ipTM=0.154 tol=1.11
2024-12-08 03:32:18,365 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=71.3 pTM=0.388 ipTM=0.141 tol=1.79
2024-12-08 03:32:26,459 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=71.2 pTM=0.395 ipTM=0.162 tol=2.3
2024-12-08 03:32:34,553 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=71.2 pTM=0.391 ipTM=0.147 tol=1.27
2024-12-08 03:32:42,646 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=71 pTM=0.393 ipTM=0.16 tol=1.12
2024-12-08 03:32:50,740 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=71.1 pTM=0.39 ipTM=0.152 tol=1.9
2024-12-08 03:32:58,832 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=71.1 pTM=0.399 ipTM=0.182 tol=1.79
2024-12-08 03:33:06,926 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=71.1 pTM=0.39 ipTM=0.148 tol=1.19
2024-12-08 03:33:15,017 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=70.9 pTM=0.399 ipTM=0.172 tol=1.17
2024-12-08 03:33:23,110 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=71.2 pTM=0.389 ipTM=0.144 tol=1.29
2024-12-08 03:33:31,203 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=71.1 pTM=0.394 ipTM=0.161 tol=1.21
2024-12-08 03:33:39,294 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=71 pTM=0.391 ipTM=0.147 tol=0.834
2024-12-08 03:33:47,387 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=71 pTM=0.396 ipTM=0.167 tol=1.56
2024-12-08 03:33:55,482 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=71.4 pTM=0.39 ipTM=0.146 tol=1.69
2024-12-08 03:34:03,573 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=71.1 pTM=0.395 ipTM=0.162 tol=1.51
2024-12-08 03:34:03,574 alphafold2_multimer_v3_model_3_seed_000 took 250.8s (30 recycles)
2024-12-08 03:34:11,912 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=66.9 pTM=0.398 ipTM=0.336
2024-12-08 03:34:19,991 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=68.8 pTM=0.38 ipTM=0.22 tol=7.57
2024-12-08 03:34:28,076 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=69.9 pTM=0.402 ipTM=0.272 tol=8.66
2024-12-08 03:34:36,162 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=69.7 pTM=0.393 ipTM=0.204 tol=3.5
2024-12-08 03:34:44,245 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=70.4 pTM=0.412 ipTM=0.255 tol=2.44
2024-12-08 03:34:52,332 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=70.6 pTM=0.405 ipTM=0.221 tol=1.48
2024-12-08 03:35:00,419 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=70.6 pTM=0.414 ipTM=0.251 tol=1.32
2024-12-08 03:35:08,506 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=70.5 pTM=0.406 ipTM=0.217 tol=0.994
2024-12-08 03:35:16,591 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=70.7 pTM=0.411 ipTM=0.243 tol=2.22
2024-12-08 03:35:24,677 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=70.7 pTM=0.407 ipTM=0.219 tol=1.21
2024-12-08 03:35:32,765 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=70.5 pTM=0.412 ipTM=0.247 tol=1.9
2024-12-08 03:35:40,852 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=70.4 pTM=0.402 ipTM=0.206 tol=1.35
2024-12-08 03:35:48,941 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=70.5 pTM=0.411 ipTM=0.236 tol=1.11
2024-12-08 03:35:57,027 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=70.4 pTM=0.407 ipTM=0.222 tol=1.52
2024-12-08 03:36:05,115 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=70.3 pTM=0.411 ipTM=0.237 tol=1.35
2024-12-08 03:36:13,204 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=70.4 pTM=0.407 ipTM=0.213 tol=2.56
2024-12-08 03:36:21,292 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=70.6 pTM=0.417 ipTM=0.253 tol=1.4
2024-12-08 03:36:29,383 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=70.5 pTM=0.405 ipTM=0.214 tol=1.25
2024-12-08 03:36:37,470 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=70.8 pTM=0.418 ipTM=0.258 tol=0.854
2024-12-08 03:36:45,561 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=70.5 pTM=0.405 ipTM=0.213 tol=2.2
2024-12-08 03:36:53,648 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=70.7 pTM=0.414 ipTM=0.249 tol=1.86
2024-12-08 03:37:01,735 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=70.4 pTM=0.406 ipTM=0.217 tol=2.62
2024-12-08 03:37:09,821 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=70.6 pTM=0.414 ipTM=0.249 tol=1.01
2024-12-08 03:37:17,908 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=70.1 pTM=0.408 ipTM=0.218 tol=1.09
2024-12-08 03:37:25,992 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=70.5 pTM=0.413 ipTM=0.245 tol=1.75
2024-12-08 03:37:34,078 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=70.2 pTM=0.404 ipTM=0.207 tol=1.72
2024-12-08 03:37:42,163 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=70.3 pTM=0.411 ipTM=0.24 tol=1.44
2024-12-08 03:37:50,247 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=70.2 pTM=0.406 ipTM=0.216 tol=2.58
2024-12-08 03:37:58,331 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=70.6 pTM=0.414 ipTM=0.245 tol=1.49
2024-12-08 03:38:06,417 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=70.7 pTM=0.408 ipTM=0.223 tol=1.34
2024-12-08 03:38:14,504 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=70.7 pTM=0.413 ipTM=0.238 tol=2.36
2024-12-08 03:38:14,504 alphafold2_multimer_v3_model_4_seed_000 took 250.7s (30 recycles)
2024-12-08 03:38:22,834 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=61.4 pTM=0.338 ipTM=0.25
2024-12-08 03:38:30,928 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=66.5 pTM=0.341 ipTM=0.182 tol=13.7
2024-12-08 03:38:39,032 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=68.4 pTM=0.347 ipTM=0.145 tol=9.05
2024-12-08 03:38:47,124 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=69.3 pTM=0.375 ipTM=0.17 tol=24.1
2024-12-08 03:38:55,225 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=70.1 pTM=0.374 ipTM=0.142 tol=2.91
2024-12-08 03:39:03,330 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=69.8 pTM=0.383 ipTM=0.177 tol=10.6
2024-12-08 03:39:11,435 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=69.1 pTM=0.38 ipTM=0.17 tol=7.23
2024-12-08 03:39:19,541 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=69.7 pTM=0.383 ipTM=0.17 tol=6.62
2024-12-08 03:39:27,647 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=69.8 pTM=0.383 ipTM=0.174 tol=2.81
2024-12-08 03:39:35,755 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=70.2 pTM=0.382 ipTM=0.166 tol=3.42
2024-12-08 03:39:43,861 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=70.3 pTM=0.394 ipTM=0.2 tol=3.46
2024-12-08 03:39:51,966 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=70.6 pTM=0.383 ipTM=0.16 tol=4.5
2024-12-08 03:40:00,077 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=70.4 pTM=0.388 ipTM=0.179 tol=2.04
2024-12-08 03:40:08,186 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=70.4 pTM=0.388 ipTM=0.179 tol=2.3
2024-12-08 03:40:16,296 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=70.6 pTM=0.388 ipTM=0.175 tol=1.9
2024-12-08 03:40:24,405 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=70.4 pTM=0.395 ipTM=0.197 tol=1.93
2024-12-08 03:40:32,516 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=71 pTM=0.387 ipTM=0.163 tol=1.78
2024-12-08 03:40:40,627 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=70.8 pTM=0.396 ipTM=0.2 tol=2.49
2024-12-08 03:40:48,738 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=71.1 pTM=0.389 ipTM=0.169 tol=1.36
2024-12-08 03:40:56,843 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=70.5 pTM=0.394 ipTM=0.194 tol=3.05
2024-12-08 03:41:04,955 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=70.9 pTM=0.393 ipTM=0.182 tol=1.94
2024-12-08 03:41:13,055 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=71.3 pTM=0.403 ipTM=0.22 tol=4.36
2024-12-08 03:41:21,162 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=71.6 pTM=0.4 ipTM=0.207 tol=3.72
2024-12-08 03:41:29,267 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=71 pTM=0.392 ipTM=0.182 tol=2.78
2024-12-08 03:41:37,379 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=70.9 pTM=0.392 ipTM=0.176 tol=3.08
2024-12-08 03:41:45,483 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=71.1 pTM=0.387 ipTM=0.166 tol=3.57
2024-12-08 03:41:53,592 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=71.1 pTM=0.386 ipTM=0.156 tol=1.61
2024-12-08 03:42:01,698 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=70.8 pTM=0.392 ipTM=0.183 tol=2.32
2024-12-08 03:42:09,807 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=71.2 pTM=0.39 ipTM=0.177 tol=2.38
2024-12-08 03:42:17,910 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=71.4 pTM=0.409 ipTM=0.246 tol=5.05
2024-12-08 03:42:26,016 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=71.4 pTM=0.398 ipTM=0.2 tol=2.75
2024-12-08 03:42:26,017 alphafold2_multimer_v3_model_5_seed_000 took 251.3s (30 recycles)
2024-12-08 03:42:26,277 reranking models by 'multimer' metric
2024-12-08 03:42:29,761 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-08 03:43:06,087 Relaxation took 39.8s
2024-12-08 03:43:06,087 rank_001_alphafold2_multimer_v3_model_2_seed_000 pLDDT=72.9 pTM=0.386 ipTM=0.31
2024-12-08 03:43:22,464 Relaxation took 16.4s
2024-12-08 03:43:22,464 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=70.7 pTM=0.413 ipTM=0.238
2024-12-08 03:43:54,840 Relaxation took 32.4s
2024-12-08 03:43:54,841 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=71.4 pTM=0.398 ipTM=0.2
2024-12-08 03:44:26,063 Relaxation took 31.2s
2024-12-08 03:44:26,063 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=72.9 pTM=0.365 ipTM=0.179
2024-12-08 03:44:58,002 Relaxation took 31.9s
2024-12-08 03:44:58,002 rank_005_alphafold2_multimer_v3_model_3_seed_000 pLDDT=71.1 pTM=0.395 ipTM=0.162
2024-12-08 03:44:59,336 Done