2024-12-08 03:51:34,829 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-08 03:51:35,162 Running on GPU
2024-12-08 03:51:37,178 Found 6 citations for tools or databases
2024-12-08 03:51:37,178 Query 1/1: RNF149_BNIP3 (length 594)
2024-12-08 03:51:37,448 Sleeping for 9s. Reason: PENDING
2024-12-08 03:51:46,705 Sleeping for 5s. Reason: RUNNING
2024-12-08 03:51:51,959 Sleeping for 9s. Reason: RUNNING
2024-12-08 03:52:01,217 Sleeping for 5s. Reason: RUNNING
2024-12-08 03:52:06,485 Sleeping for 6s. Reason: RUNNING
2024-12-08 03:52:12,741 Sleeping for 5s. Reason: RUNNING
2024-12-08 03:52:18,005 Sleeping for 7s. Reason: RUNNING
2024-12-08 03:52:25,273 Sleeping for 6s. Reason: RUNNING
2024-12-08 03:52:31,530 Sleeping for 9s. Reason: RUNNING
2024-12-08 03:52:40,791 Sleeping for 10s. Reason: RUNNING
2024-12-08 03:52:52,228 Sleeping for 5s. Reason: PENDING
2024-12-08 03:52:57,483 Sleeping for 9s. Reason: RUNNING
2024-12-08 03:53:06,743 Sleeping for 10s. Reason: RUNNING
2024-12-08 03:53:17,000 Sleeping for 10s. Reason: RUNNING
2024-12-08 03:53:27,270 Sleeping for 8s. Reason: RUNNING
2024-12-08 03:53:35,527 Sleeping for 10s. Reason: RUNNING
2024-12-08 03:53:48,812 Setting max_seq=508, max_extra_seq=2048
2024-12-08 03:57:04,587 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=54.4 pTM=0.361 ipTM=0.143
2024-12-08 03:57:14,960 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=55.4 pTM=0.365 ipTM=0.18 tol=11.7
2024-12-08 03:57:25,329 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=55.5 pTM=0.365 ipTM=0.183 tol=5.41
2024-12-08 03:57:35,701 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=55.6 pTM=0.366 ipTM=0.188 tol=4.47
2024-12-08 03:57:46,072 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=55.7 pTM=0.367 ipTM=0.19 tol=3.81
2024-12-08 03:57:56,442 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=56.1 pTM=0.368 ipTM=0.198 tol=3.74
2024-12-08 03:58:06,807 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=56 pTM=0.367 ipTM=0.192 tol=2.33
2024-12-08 03:58:17,173 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=56.2 pTM=0.369 ipTM=0.207 tol=3.7
2024-12-08 03:58:27,543 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=56 pTM=0.367 ipTM=0.192 tol=4.39
2024-12-08 03:58:37,927 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=56.4 pTM=0.368 ipTM=0.203 tol=4.52
2024-12-08 03:58:48,294 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=55.9 pTM=0.367 ipTM=0.195 tol=4.5
2024-12-08 03:58:58,654 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=56.2 pTM=0.366 ipTM=0.194 tol=3.71
2024-12-08 03:59:09,013 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=56.1 pTM=0.366 ipTM=0.194 tol=4.17
2024-12-08 03:59:19,374 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=56.3 pTM=0.368 ipTM=0.202 tol=1.91
2024-12-08 03:59:29,733 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=56.2 pTM=0.366 ipTM=0.196 tol=4.85
2024-12-08 03:59:40,106 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=56.3 pTM=0.367 ipTM=0.199 tol=1.96
2024-12-08 03:59:50,464 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=56 pTM=0.366 ipTM=0.193 tol=3.45
2024-12-08 04:00:00,831 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=56.4 pTM=0.367 ipTM=0.203 tol=1.61
2024-12-08 04:00:11,195 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=56.1 pTM=0.366 ipTM=0.193 tol=1.51
2024-12-08 04:00:21,564 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=56.3 pTM=0.366 ipTM=0.199 tol=1.88
2024-12-08 04:00:31,924 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=56.2 pTM=0.366 ipTM=0.19 tol=1.81
2024-12-08 04:00:42,293 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=56.4 pTM=0.364 ipTM=0.196 tol=4.44
2024-12-08 04:00:52,658 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=56.1 pTM=0.364 ipTM=0.191 tol=4.79
2024-12-08 04:01:03,031 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=56.2 pTM=0.365 ipTM=0.193 tol=3.54
2024-12-08 04:01:13,418 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=56.2 pTM=0.365 ipTM=0.195 tol=3.95
2024-12-08 04:01:23,796 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=56.2 pTM=0.365 ipTM=0.191 tol=4.46
2024-12-08 04:01:34,164 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=56.2 pTM=0.365 ipTM=0.195 tol=4.09
2024-12-08 04:01:44,541 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=56.1 pTM=0.366 ipTM=0.195 tol=2.2
2024-12-08 04:01:54,925 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=56.2 pTM=0.365 ipTM=0.197 tol=1.18
2024-12-08 04:02:05,303 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=56.2 pTM=0.365 ipTM=0.193 tol=2.07
2024-12-08 04:02:15,684 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=56.3 pTM=0.365 ipTM=0.196 tol=3.2
2024-12-08 04:02:15,685 alphafold2_multimer_v3_model_1_seed_000 took 500.2s (30 recycles)
2024-12-08 04:02:26,359 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=53.9 pTM=0.37 ipTM=0.165
2024-12-08 04:02:36,724 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=55.1 pTM=0.37 ipTM=0.21 tol=11.1
2024-12-08 04:02:47,116 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=54.9 pTM=0.377 ipTM=0.28 tol=7.21
2024-12-08 04:02:57,503 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=55.2 pTM=0.376 ipTM=0.301 tol=3.45
2024-12-08 04:03:07,894 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=55.4 pTM=0.376 ipTM=0.301 tol=2.69
2024-12-08 04:03:18,278 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=55.4 pTM=0.377 ipTM=0.29 tol=3
2024-12-08 04:03:28,663 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=55.2 pTM=0.378 ipTM=0.293 tol=4.43
2024-12-08 04:03:39,055 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=55.4 pTM=0.38 ipTM=0.299 tol=4.36
2024-12-08 04:03:49,430 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=55.6 pTM=0.38 ipTM=0.312 tol=3.63
2024-12-08 04:03:59,803 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=55.4 pTM=0.382 ipTM=0.318 tol=3.89
2024-12-08 04:04:10,181 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=55.5 pTM=0.38 ipTM=0.311 tol=4.32
2024-12-08 04:04:20,560 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=55.3 pTM=0.379 ipTM=0.306 tol=4.95
2024-12-08 04:04:30,941 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=55.5 pTM=0.381 ipTM=0.31 tol=3.74
2024-12-08 04:04:41,324 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=55.7 pTM=0.382 ipTM=0.318 tol=2.56
2024-12-08 04:04:51,694 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=55.5 pTM=0.38 ipTM=0.31 tol=5.51
2024-12-08 04:05:02,065 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=55.6 pTM=0.382 ipTM=0.316 tol=3.37
2024-12-08 04:05:12,438 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=55.5 pTM=0.383 ipTM=0.312 tol=3.44
2024-12-08 04:05:22,812 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=55.7 pTM=0.383 ipTM=0.323 tol=4.83
2024-12-08 04:05:33,184 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=55.6 pTM=0.382 ipTM=0.317 tol=2.01
2024-12-08 04:05:43,570 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=55.7 pTM=0.38 ipTM=0.305 tol=3.49
2024-12-08 04:05:53,941 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=55.4 pTM=0.381 ipTM=0.317 tol=3.49
2024-12-08 04:06:04,317 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=55.7 pTM=0.382 ipTM=0.319 tol=2.93
2024-12-08 04:06:14,697 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=55.5 pTM=0.382 ipTM=0.32 tol=3.3
2024-12-08 04:06:25,075 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=55.3 pTM=0.382 ipTM=0.321 tol=3.55
2024-12-08 04:06:35,444 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=55.4 pTM=0.382 ipTM=0.322 tol=1.63
2024-12-08 04:06:45,819 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=55.3 pTM=0.381 ipTM=0.317 tol=1.36
2024-12-08 04:06:56,194 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=55.3 pTM=0.38 ipTM=0.311 tol=1.95
2024-12-08 04:07:06,581 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=55.7 pTM=0.382 ipTM=0.325 tol=3.71
2024-12-08 04:07:16,962 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=55.3 pTM=0.38 ipTM=0.318 tol=3.29
2024-12-08 04:07:27,345 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=55.4 pTM=0.38 ipTM=0.318 tol=0.97
2024-12-08 04:07:37,730 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=55.5 pTM=0.381 ipTM=0.316 tol=1.44
2024-12-08 04:07:37,730 alphafold2_multimer_v3_model_2_seed_000 took 321.7s (30 recycles)
2024-12-08 04:07:48,461 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=53.9 pTM=0.37 ipTM=0.137
2024-12-08 04:07:58,872 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=53.3 pTM=0.368 ipTM=0.129 tol=24.4
2024-12-08 04:08:09,299 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=53.1 pTM=0.369 ipTM=0.144 tol=26.1
2024-12-08 04:08:19,720 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=53.1 pTM=0.377 ipTM=0.164 tol=9.36
2024-12-08 04:08:30,144 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=53.7 pTM=0.377 ipTM=0.192 tol=12.6
2024-12-08 04:08:40,565 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=54.2 pTM=0.382 ipTM=0.187 tol=10
2024-12-08 04:08:50,985 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=54.4 pTM=0.383 ipTM=0.199 tol=5.66
2024-12-08 04:09:01,395 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=54.4 pTM=0.383 ipTM=0.199 tol=4.04
2024-12-08 04:09:11,806 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=54.6 pTM=0.384 ipTM=0.203 tol=4.13
2024-12-08 04:09:22,209 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=54.7 pTM=0.384 ipTM=0.205 tol=5.59
2024-12-08 04:09:32,621 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=54.6 pTM=0.383 ipTM=0.206 tol=3.45
2024-12-08 04:09:43,039 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=54.7 pTM=0.384 ipTM=0.205 tol=2.79
2024-12-08 04:09:53,451 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=54.7 pTM=0.384 ipTM=0.21 tol=2.75
2024-12-08 04:10:03,874 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=54.8 pTM=0.385 ipTM=0.211 tol=2.9
2024-12-08 04:10:14,284 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=54.8 pTM=0.383 ipTM=0.212 tol=2.57
2024-12-08 04:10:24,695 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=54.7 pTM=0.384 ipTM=0.208 tol=3.13
2024-12-08 04:10:35,102 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=54.8 pTM=0.384 ipTM=0.21 tol=2.52
2024-12-08 04:10:45,522 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=54.8 pTM=0.385 ipTM=0.213 tol=4.02
2024-12-08 04:10:55,940 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=54.7 pTM=0.385 ipTM=0.209 tol=4.4
2024-12-08 04:11:06,350 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=54.8 pTM=0.385 ipTM=0.207 tol=5.52
2024-12-08 04:11:16,774 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=54.6 pTM=0.385 ipTM=0.209 tol=1.75
2024-12-08 04:11:27,191 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=54.7 pTM=0.385 ipTM=0.207 tol=2.21
2024-12-08 04:11:37,610 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=54.8 pTM=0.384 ipTM=0.211 tol=2.43
2024-12-08 04:11:48,032 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=54.9 pTM=0.386 ipTM=0.212 tol=2.54
2024-12-08 04:11:58,446 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=54.8 pTM=0.386 ipTM=0.211 tol=3.43
2024-12-08 04:12:08,862 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=54.7 pTM=0.385 ipTM=0.209 tol=6.43
2024-12-08 04:12:19,274 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=54.8 pTM=0.385 ipTM=0.206 tol=4.46
2024-12-08 04:12:29,682 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=54.8 pTM=0.386 ipTM=0.214 tol=4.6
2024-12-08 04:12:40,090 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=54.8 pTM=0.385 ipTM=0.209 tol=3.79
2024-12-08 04:12:50,505 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=54.7 pTM=0.385 ipTM=0.208 tol=4.41
2024-12-08 04:13:00,906 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=54.8 pTM=0.384 ipTM=0.206 tol=3.91
2024-12-08 04:13:00,907 alphafold2_multimer_v3_model_3_seed_000 took 322.9s (30 recycles)
2024-12-08 04:13:11,631 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=54.4 pTM=0.362 ipTM=0.181
2024-12-08 04:13:22,042 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=54.9 pTM=0.375 ipTM=0.181 tol=11.7
2024-12-08 04:13:32,449 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=55.3 pTM=0.377 ipTM=0.195 tol=10.7
2024-12-08 04:13:42,854 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=55.3 pTM=0.378 ipTM=0.193 tol=6.27
2024-12-08 04:13:53,265 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=55.5 pTM=0.382 ipTM=0.208 tol=3.9
2024-12-08 04:14:03,673 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=55.3 pTM=0.38 ipTM=0.202 tol=1.75
2024-12-08 04:14:14,088 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=55.2 pTM=0.382 ipTM=0.209 tol=5.93
2024-12-08 04:14:24,496 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=55.5 pTM=0.382 ipTM=0.205 tol=5.39
2024-12-08 04:14:34,909 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=55.6 pTM=0.384 ipTM=0.209 tol=4.09
2024-12-08 04:14:45,307 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=55.8 pTM=0.385 ipTM=0.211 tol=3.29
2024-12-08 04:14:55,718 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=55.5 pTM=0.384 ipTM=0.21 tol=4.88
2024-12-08 04:15:06,127 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=55.7 pTM=0.384 ipTM=0.203 tol=2.55
2024-12-08 04:15:16,536 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=55.6 pTM=0.385 ipTM=0.213 tol=5.25
2024-12-08 04:15:26,940 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=55.8 pTM=0.388 ipTM=0.209 tol=2.66
2024-12-08 04:15:37,349 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=55.5 pTM=0.385 ipTM=0.212 tol=5.54
2024-12-08 04:15:47,758 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=55.9 pTM=0.387 ipTM=0.212 tol=6.36
2024-12-08 04:15:58,158 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=55.6 pTM=0.386 ipTM=0.213 tol=1.99
2024-12-08 04:16:08,556 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=55.7 pTM=0.386 ipTM=0.214 tol=2.3
2024-12-08 04:16:18,965 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=55.7 pTM=0.387 ipTM=0.213 tol=1.78
2024-12-08 04:16:29,369 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=55.9 pTM=0.386 ipTM=0.21 tol=2.13
2024-12-08 04:16:39,774 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=55.7 pTM=0.385 ipTM=0.213 tol=1.82
2024-12-08 04:16:50,179 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=55.9 pTM=0.387 ipTM=0.211 tol=2.04
2024-12-08 04:17:00,583 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=55.7 pTM=0.386 ipTM=0.21 tol=4.77
2024-12-08 04:17:10,993 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=55.8 pTM=0.387 ipTM=0.208 tol=6.08
2024-12-08 04:17:21,402 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=55.8 pTM=0.387 ipTM=0.209 tol=6.68
2024-12-08 04:17:31,803 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=55.7 pTM=0.386 ipTM=0.206 tol=6.55
2024-12-08 04:17:42,216 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=55.6 pTM=0.386 ipTM=0.209 tol=7.2
2024-12-08 04:17:52,628 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=55.2 pTM=0.386 ipTM=0.208 tol=8.16
2024-12-08 04:18:03,037 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=55.6 pTM=0.384 ipTM=0.21 tol=8.91
2024-12-08 04:18:13,451 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=55.6 pTM=0.385 ipTM=0.204 tol=6.85
2024-12-08 04:18:23,868 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=55.7 pTM=0.386 ipTM=0.209 tol=3.09
2024-12-08 04:18:23,868 alphafold2_multimer_v3_model_4_seed_000 took 322.7s (30 recycles)
2024-12-08 04:18:34,575 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=53.2 pTM=0.365 ipTM=0.176
2024-12-08 04:18:44,987 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=53.7 pTM=0.376 ipTM=0.186 tol=11.9
2024-12-08 04:18:55,377 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=54.2 pTM=0.382 ipTM=0.197 tol=8.6
2024-12-08 04:19:05,783 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=54.2 pTM=0.381 ipTM=0.201 tol=5.59
2024-12-08 04:19:16,172 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=54.2 pTM=0.382 ipTM=0.205 tol=4.6
2024-12-08 04:19:26,576 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=54.5 pTM=0.383 ipTM=0.208 tol=4.3
2024-12-08 04:19:36,977 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=54.5 pTM=0.382 ipTM=0.211 tol=3.34
2024-12-08 04:19:47,384 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=54.5 pTM=0.382 ipTM=0.213 tol=3.95
2024-12-08 04:19:57,783 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=54.3 pTM=0.382 ipTM=0.209 tol=3.8
2024-12-08 04:20:08,186 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=54.6 pTM=0.384 ipTM=0.213 tol=3.79
2024-12-08 04:20:18,583 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=54.4 pTM=0.382 ipTM=0.211 tol=3.61
2024-12-08 04:20:28,982 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=54.7 pTM=0.382 ipTM=0.212 tol=3.41
2024-12-08 04:20:39,374 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=54.4 pTM=0.383 ipTM=0.216 tol=4.56
2024-12-08 04:20:49,784 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=54.5 pTM=0.384 ipTM=0.216 tol=2.7
2024-12-08 04:21:00,217 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=54.6 pTM=0.384 ipTM=0.214 tol=4.79
2024-12-08 04:21:10,648 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=54.6 pTM=0.384 ipTM=0.218 tol=2.45
2024-12-08 04:21:21,091 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=54.5 pTM=0.383 ipTM=0.215 tol=1.87
2024-12-08 04:21:31,528 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=54.3 pTM=0.383 ipTM=0.215 tol=4.68
2024-12-08 04:21:41,976 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=54.4 pTM=0.383 ipTM=0.215 tol=2.43
2024-12-08 04:21:52,417 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=54.6 pTM=0.382 ipTM=0.216 tol=4.95
2024-12-08 04:22:02,847 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=54.2 pTM=0.382 ipTM=0.213 tol=4
2024-12-08 04:22:13,295 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=54.5 pTM=0.383 ipTM=0.214 tol=4.53
2024-12-08 04:22:23,733 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=54.4 pTM=0.384 ipTM=0.218 tol=2.24
2024-12-08 04:22:34,193 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=54.4 pTM=0.384 ipTM=0.216 tol=1.99
2024-12-08 04:22:44,638 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=54.4 pTM=0.386 ipTM=0.217 tol=5.37
2024-12-08 04:22:55,088 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=54.5 pTM=0.386 ipTM=0.217 tol=4.63
2024-12-08 04:23:05,528 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=54.4 pTM=0.384 ipTM=0.212 tol=4.38
2024-12-08 04:23:15,963 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=54.4 pTM=0.385 ipTM=0.216 tol=3.66
2024-12-08 04:23:26,410 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=54.5 pTM=0.385 ipTM=0.213 tol=4.14
2024-12-08 04:23:36,847 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=54.6 pTM=0.386 ipTM=0.215 tol=3.03
2024-12-08 04:23:47,285 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=54.7 pTM=0.385 ipTM=0.213 tol=2.67
2024-12-08 04:23:47,285 alphafold2_multimer_v3_model_5_seed_000 took 323.1s (30 recycles)
2024-12-08 04:23:47,583 reranking models by 'multimer' metric
2024-12-08 04:23:48,625 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-08 04:24:32,202 Relaxation took 44.6s
2024-12-08 04:24:32,202 rank_001_alphafold2_multimer_v3_model_2_seed_000 pLDDT=55.5 pTM=0.381 ipTM=0.316
2024-12-08 04:25:10,268 Relaxation took 38.1s
2024-12-08 04:25:10,268 rank_002_alphafold2_multimer_v3_model_5_seed_000 pLDDT=54.7 pTM=0.385 ipTM=0.213
2024-12-08 04:25:38,428 Relaxation took 28.2s
2024-12-08 04:25:38,429 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=55.7 pTM=0.386 ipTM=0.209
2024-12-08 04:26:16,083 Relaxation took 37.7s
2024-12-08 04:26:16,083 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=54.8 pTM=0.384 ipTM=0.206
2024-12-08 04:26:54,477 Relaxation took 38.4s
2024-12-08 04:26:54,477 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=56.3 pTM=0.365 ipTM=0.196
2024-12-08 04:26:56,123 Done