2024-12-08 04:44:01,767 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-08 04:44:02,121 Running on GPU
2024-12-08 04:44:03,171 Found 6 citations for tools or databases
2024-12-08 04:44:03,171 Query 1/1: RNF149_NRSN1 (length 595)
2024-12-08 04:44:03,437 Sleeping for 8s. Reason: PENDING
2024-12-08 04:44:11,704 Sleeping for 6s. Reason: RUNNING
2024-12-08 04:44:17,963 Sleeping for 8s. Reason: RUNNING
2024-12-08 04:44:26,217 Sleeping for 5s. Reason: RUNNING
2024-12-08 04:44:31,480 Sleeping for 7s. Reason: RUNNING
2024-12-08 04:44:38,736 Sleeping for 5s. Reason: RUNNING
2024-12-08 04:44:43,990 Sleeping for 10s. Reason: RUNNING
2024-12-08 04:44:54,254 Sleeping for 7s. Reason: RUNNING
2024-12-08 04:45:01,508 Sleeping for 5s. Reason: RUNNING
2024-12-08 04:45:06,768 Sleeping for 8s. Reason: RUNNING
2024-12-08 04:45:15,026 Sleeping for 5s. Reason: RUNNING
2024-12-08 04:45:20,281 Sleeping for 8s. Reason: RUNNING
2024-12-08 04:45:28,549 Sleeping for 7s. Reason: RUNNING
2024-12-08 04:45:37,348 Sleeping for 6s. Reason: PENDING
2024-12-08 04:45:43,614 Sleeping for 7s. Reason: PENDING
2024-12-08 04:45:50,869 Sleeping for 6s. Reason: RUNNING
2024-12-08 04:45:57,132 Sleeping for 7s. Reason: RUNNING
2024-12-08 04:46:04,387 Sleeping for 6s. Reason: RUNNING
2024-12-08 04:46:10,645 Sleeping for 6s. Reason: RUNNING
2024-12-08 04:46:16,900 Sleeping for 5s. Reason: RUNNING
2024-12-08 04:46:22,158 Sleeping for 9s. Reason: RUNNING
2024-12-08 04:46:34,146 Setting max_seq=508, max_extra_seq=2048
2024-12-08 04:50:07,732 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=55.6 pTM=0.377 ipTM=0.317
2024-12-08 04:50:17,790 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=56.9 pTM=0.371 ipTM=0.265 tol=8.73
2024-12-08 04:50:27,865 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=57.3 pTM=0.37 ipTM=0.247 tol=3.9
2024-12-08 04:50:37,945 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=58 pTM=0.369 ipTM=0.237 tol=1.48
2024-12-08 04:50:48,016 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=58.2 pTM=0.372 ipTM=0.257 tol=1.88
2024-12-08 04:50:58,091 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=58.2 pTM=0.371 ipTM=0.249 tol=1.38
2024-12-08 04:51:08,164 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=58.4 pTM=0.37 ipTM=0.26 tol=3.71
2024-12-08 04:51:18,246 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=58.5 pTM=0.372 ipTM=0.246 tol=2.52
2024-12-08 04:51:28,320 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=58.5 pTM=0.374 ipTM=0.279 tol=1.96
2024-12-08 04:51:38,393 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=58.4 pTM=0.373 ipTM=0.254 tol=1.81
2024-12-08 04:51:48,468 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=58.4 pTM=0.374 ipTM=0.263 tol=2.08
2024-12-08 04:51:58,553 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=58.5 pTM=0.374 ipTM=0.253 tol=3.78
2024-12-08 04:52:08,635 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=58.1 pTM=0.373 ipTM=0.264 tol=4.1
2024-12-08 04:52:18,724 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=58.6 pTM=0.374 ipTM=0.252 tol=3.23
2024-12-08 04:52:28,838 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=58.4 pTM=0.371 ipTM=0.255 tol=2.16
2024-12-08 04:52:38,965 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=58 pTM=0.373 ipTM=0.253 tol=3.12
2024-12-08 04:52:49,087 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=58.2 pTM=0.373 ipTM=0.261 tol=2.31
2024-12-08 04:52:59,196 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=58.6 pTM=0.374 ipTM=0.253 tol=2.03
2024-12-08 04:53:09,325 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=58.4 pTM=0.372 ipTM=0.259 tol=3.36
2024-12-08 04:53:19,445 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=58.3 pTM=0.373 ipTM=0.253 tol=3.45
2024-12-08 04:53:29,555 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=58.4 pTM=0.373 ipTM=0.263 tol=3.61
2024-12-08 04:53:39,662 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=58.4 pTM=0.375 ipTM=0.259 tol=2.12
2024-12-08 04:53:49,776 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=58.4 pTM=0.371 ipTM=0.263 tol=2.07
2024-12-08 04:53:59,884 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=58.7 pTM=0.374 ipTM=0.254 tol=1.75
2024-12-08 04:54:09,988 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=58.6 pTM=0.374 ipTM=0.262 tol=1.86
2024-12-08 04:54:20,102 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=58.5 pTM=0.374 ipTM=0.254 tol=1.71
2024-12-08 04:54:30,222 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=58 pTM=0.372 ipTM=0.256 tol=2
2024-12-08 04:54:40,360 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=58.2 pTM=0.374 ipTM=0.25 tol=2.14
2024-12-08 04:54:50,514 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=58.1 pTM=0.373 ipTM=0.264 tol=1.95
2024-12-08 04:55:00,637 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=58.1 pTM=0.375 ipTM=0.258 tol=1.44
2024-12-08 04:55:10,744 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=58.5 pTM=0.379 ipTM=0.273 tol=1.92
2024-12-08 04:55:10,745 alphafold2_multimer_v3_model_1_seed_000 took 509.4s (30 recycles)
2024-12-08 04:55:21,148 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=53.3 pTM=0.374 ipTM=0.284
2024-12-08 04:55:31,269 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=54.3 pTM=0.363 ipTM=0.259 tol=5.75
2024-12-08 04:55:41,394 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=54.7 pTM=0.366 ipTM=0.283 tol=3.34
2024-12-08 04:55:51,527 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=55.4 pTM=0.362 ipTM=0.263 tol=3.44
2024-12-08 04:56:01,668 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=55.5 pTM=0.363 ipTM=0.265 tol=2.28
2024-12-08 04:56:11,810 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=56.1 pTM=0.365 ipTM=0.271 tol=2.97
2024-12-08 04:56:21,945 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=56.3 pTM=0.366 ipTM=0.259 tol=2.95
2024-12-08 04:56:32,073 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=56.1 pTM=0.365 ipTM=0.264 tol=0.754
2024-12-08 04:56:42,197 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=56.1 pTM=0.365 ipTM=0.262 tol=1.5
2024-12-08 04:56:52,328 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=56 pTM=0.366 ipTM=0.258 tol=1.75
2024-12-08 04:57:02,457 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=55.9 pTM=0.365 ipTM=0.257 tol=1.12
2024-12-08 04:57:12,581 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=56.1 pTM=0.365 ipTM=0.257 tol=1.78
2024-12-08 04:57:22,707 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=56.1 pTM=0.365 ipTM=0.255 tol=2.47
2024-12-08 04:57:32,843 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=56.2 pTM=0.366 ipTM=0.263 tol=3.11
2024-12-08 04:57:42,976 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=56.4 pTM=0.366 ipTM=0.264 tol=4.22
2024-12-08 04:57:53,104 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=56.2 pTM=0.367 ipTM=0.262 tol=3.51
2024-12-08 04:58:03,232 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=56.2 pTM=0.366 ipTM=0.264 tol=4.54
2024-12-08 04:58:13,363 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=56.3 pTM=0.366 ipTM=0.26 tol=5.64
2024-12-08 04:58:23,485 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=56.1 pTM=0.367 ipTM=0.265 tol=8.27
2024-12-08 04:58:33,606 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=56.5 pTM=0.366 ipTM=0.272 tol=8.12
2024-12-08 04:58:43,737 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=56.2 pTM=0.367 ipTM=0.272 tol=5.62
2024-12-08 04:58:53,862 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=56.2 pTM=0.367 ipTM=0.275 tol=3.3
2024-12-08 04:59:03,986 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=56.4 pTM=0.367 ipTM=0.271 tol=1.35
2024-12-08 04:59:14,114 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=56.2 pTM=0.367 ipTM=0.269 tol=5.27
2024-12-08 04:59:24,241 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=56.2 pTM=0.368 ipTM=0.263 tol=2.83
2024-12-08 04:59:34,373 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=56.2 pTM=0.369 ipTM=0.27 tol=2.36
2024-12-08 04:59:44,500 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=55.9 pTM=0.368 ipTM=0.269 tol=2.05
2024-12-08 04:59:54,632 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=56.3 pTM=0.372 ipTM=0.275 tol=7.14
2024-12-08 05:00:04,767 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=56.4 pTM=0.37 ipTM=0.277 tol=2.63
2024-12-08 05:00:14,902 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=56.4 pTM=0.371 ipTM=0.276 tol=2.59
2024-12-08 05:00:25,034 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=56.5 pTM=0.369 ipTM=0.275 tol=4.24
2024-12-08 05:00:25,035 alphafold2_multimer_v3_model_2_seed_000 took 314.0s (30 recycles)
2024-12-08 05:00:35,468 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=55.3 pTM=0.398 ipTM=0.281
2024-12-08 05:00:45,602 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=55.7 pTM=0.397 ipTM=0.286 tol=8.43
2024-12-08 05:00:55,729 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=56.2 pTM=0.397 ipTM=0.285 tol=4.36
2024-12-08 05:01:05,864 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=56.6 pTM=0.394 ipTM=0.282 tol=4.21
2024-12-08 05:01:15,992 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=56.5 pTM=0.393 ipTM=0.294 tol=6.46
2024-12-08 05:01:26,136 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=57.1 pTM=0.401 ipTM=0.3 tol=8.62
2024-12-08 05:01:36,284 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=57.5 pTM=0.397 ipTM=0.305 tol=4.75
2024-12-08 05:01:46,421 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=57.5 pTM=0.401 ipTM=0.305 tol=5.58
2024-12-08 05:01:56,560 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=57.2 pTM=0.399 ipTM=0.306 tol=2.92
2024-12-08 05:02:06,690 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=57.3 pTM=0.402 ipTM=0.302 tol=4.47
2024-12-08 05:02:16,825 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=57.2 pTM=0.401 ipTM=0.304 tol=2.56
2024-12-08 05:02:26,965 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=57.6 pTM=0.404 ipTM=0.304 tol=2.76
2024-12-08 05:02:37,102 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=57.1 pTM=0.402 ipTM=0.308 tol=1.85
2024-12-08 05:02:47,238 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=57.7 pTM=0.406 ipTM=0.315 tol=1.13
2024-12-08 05:02:57,368 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=57.4 pTM=0.4 ipTM=0.309 tol=1.13
2024-12-08 05:03:07,514 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=57.2 pTM=0.405 ipTM=0.313 tol=2.22
2024-12-08 05:03:17,651 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=56.8 pTM=0.402 ipTM=0.304 tol=4.77
2024-12-08 05:03:27,778 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=57.4 pTM=0.405 ipTM=0.309 tol=1.88
2024-12-08 05:03:37,916 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=57.2 pTM=0.401 ipTM=0.302 tol=2.46
2024-12-08 05:03:48,048 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=57.4 pTM=0.402 ipTM=0.301 tol=2.28
2024-12-08 05:03:58,190 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=57.1 pTM=0.401 ipTM=0.301 tol=2.47
2024-12-08 05:04:08,322 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=57 pTM=0.4 ipTM=0.296 tol=2.43
2024-12-08 05:04:18,451 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=57.2 pTM=0.398 ipTM=0.302 tol=1.74
2024-12-08 05:04:28,579 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=57.2 pTM=0.401 ipTM=0.301 tol=2.67
2024-12-08 05:04:38,713 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=57.3 pTM=0.398 ipTM=0.294 tol=1.21
2024-12-08 05:04:48,848 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=57.3 pTM=0.401 ipTM=0.293 tol=2.33
2024-12-08 05:04:58,982 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=56.8 pTM=0.396 ipTM=0.29 tol=1.33
2024-12-08 05:05:09,114 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=57.1 pTM=0.399 ipTM=0.292 tol=1.61
2024-12-08 05:05:19,243 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=56.8 pTM=0.396 ipTM=0.292 tol=1.21
2024-12-08 05:05:29,384 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=57 pTM=0.4 ipTM=0.293 tol=1.32
2024-12-08 05:05:39,528 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=57.2 pTM=0.399 ipTM=0.297 tol=1.14
2024-12-08 05:05:39,529 alphafold2_multimer_v3_model_3_seed_000 took 314.2s (30 recycles)
2024-12-08 05:05:49,965 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=54.8 pTM=0.399 ipTM=0.298
2024-12-08 05:06:00,093 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=56.2 pTM=0.408 ipTM=0.295 tol=9.4
2024-12-08 05:06:10,225 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=57.2 pTM=0.394 ipTM=0.313 tol=6.98
2024-12-08 05:06:20,352 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=58.5 pTM=0.396 ipTM=0.367 tol=4.16
2024-12-08 05:06:30,483 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=57.9 pTM=0.394 ipTM=0.331 tol=2.59
2024-12-08 05:06:40,625 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=59.1 pTM=0.397 ipTM=0.39 tol=3.82
2024-12-08 05:06:50,748 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=58.7 pTM=0.393 ipTM=0.341 tol=4.31
2024-12-08 05:07:00,873 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=58.9 pTM=0.393 ipTM=0.351 tol=2.28
2024-12-08 05:07:11,001 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=58.5 pTM=0.393 ipTM=0.35 tol=2.01
2024-12-08 05:07:21,127 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=59.2 pTM=0.395 ipTM=0.382 tol=1.53
2024-12-08 05:07:31,272 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=58.6 pTM=0.394 ipTM=0.341 tol=2.17
2024-12-08 05:07:41,399 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=58.8 pTM=0.393 ipTM=0.354 tol=1.51
2024-12-08 05:07:51,533 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=58.3 pTM=0.392 ipTM=0.35 tol=1.56
2024-12-08 05:08:01,673 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=58.8 pTM=0.394 ipTM=0.375 tol=1.63
2024-12-08 05:08:11,808 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=58.4 pTM=0.391 ipTM=0.346 tol=1.49
2024-12-08 05:08:21,946 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=58.9 pTM=0.396 ipTM=0.378 tol=2.58
2024-12-08 05:08:32,078 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=58.2 pTM=0.394 ipTM=0.347 tol=2.47
2024-12-08 05:08:42,205 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=58.9 pTM=0.394 ipTM=0.363 tol=1.98
2024-12-08 05:08:52,336 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=58.3 pTM=0.393 ipTM=0.348 tol=1.19
2024-12-08 05:09:02,467 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=58.9 pTM=0.392 ipTM=0.375 tol=0.966
2024-12-08 05:09:12,604 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=58.6 pTM=0.392 ipTM=0.345 tol=1.21
2024-12-08 05:09:22,742 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=58.7 pTM=0.393 ipTM=0.356 tol=1.2
2024-12-08 05:09:32,874 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=58.7 pTM=0.39 ipTM=0.356 tol=1.2
2024-12-08 05:09:43,003 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=59 pTM=0.397 ipTM=0.388 tol=1.61
2024-12-08 05:09:53,138 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=58.5 pTM=0.394 ipTM=0.339 tol=1.28
2024-12-08 05:10:03,274 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=58.5 pTM=0.389 ipTM=0.364 tol=1.25
2024-12-08 05:10:13,401 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=57.8 pTM=0.394 ipTM=0.345 tol=1.05
2024-12-08 05:10:23,529 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=58.8 pTM=0.398 ipTM=0.383 tol=1.54
2024-12-08 05:10:33,659 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=58.2 pTM=0.392 ipTM=0.345 tol=0.959
2024-12-08 05:10:43,786 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=58.7 pTM=0.395 ipTM=0.368 tol=2.47
2024-12-08 05:10:53,920 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=58.4 pTM=0.395 ipTM=0.349 tol=1.2
2024-12-08 05:10:53,921 alphafold2_multimer_v3_model_4_seed_000 took 314.1s (30 recycles)
2024-12-08 05:11:04,362 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=53.5 pTM=0.378 ipTM=0.234
2024-12-08 05:11:14,495 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=54.8 pTM=0.388 ipTM=0.295 tol=8.74
2024-12-08 05:11:24,631 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=55.2 pTM=0.387 ipTM=0.304 tol=5.11
2024-12-08 05:11:34,764 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=56.2 pTM=0.394 ipTM=0.341 tol=9.12
2024-12-08 05:11:44,917 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=56.5 pTM=0.39 ipTM=0.33 tol=6.65
2024-12-08 05:11:55,048 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=57.7 pTM=0.396 ipTM=0.375 tol=6.03
2024-12-08 05:12:05,180 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=57.7 pTM=0.392 ipTM=0.364 tol=4.86
2024-12-08 05:12:15,309 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=58 pTM=0.397 ipTM=0.395 tol=4.27
2024-12-08 05:12:25,437 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=57.4 pTM=0.394 ipTM=0.364 tol=4.95
2024-12-08 05:12:35,582 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=57.9 pTM=0.398 ipTM=0.391 tol=6.7
2024-12-08 05:12:45,720 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=57.7 pTM=0.396 ipTM=0.366 tol=6.72
2024-12-08 05:12:55,851 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=58.3 pTM=0.4 ipTM=0.391 tol=3.3
2024-12-08 05:13:05,982 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=57.7 pTM=0.396 ipTM=0.373 tol=3.77
2024-12-08 05:13:16,111 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=58.4 pTM=0.4 ipTM=0.396 tol=2.36
2024-12-08 05:13:26,256 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=57.9 pTM=0.396 ipTM=0.377 tol=3.49
2024-12-08 05:13:36,389 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=57.9 pTM=0.399 ipTM=0.386 tol=1.94
2024-12-08 05:13:46,520 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=57.4 pTM=0.395 ipTM=0.363 tol=1.69
2024-12-08 05:13:56,653 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=58.5 pTM=0.4 ipTM=0.396 tol=4.23
2024-12-08 05:14:06,790 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=57.8 pTM=0.396 ipTM=0.374 tol=1.98
2024-12-08 05:14:16,936 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=58.4 pTM=0.398 ipTM=0.389 tol=3.54
2024-12-08 05:14:27,073 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=57.7 pTM=0.396 ipTM=0.372 tol=3.1
2024-12-08 05:14:37,209 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=58.1 pTM=0.397 ipTM=0.384 tol=3.45
2024-12-08 05:14:47,349 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=57.9 pTM=0.394 ipTM=0.37 tol=1.33
2024-12-08 05:14:57,483 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=58.2 pTM=0.397 ipTM=0.389 tol=1.92
2024-12-08 05:15:07,621 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=57.8 pTM=0.394 ipTM=0.365 tol=3.94
2024-12-08 05:15:17,752 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=58.3 pTM=0.4 ipTM=0.394 tol=4.04
2024-12-08 05:15:27,884 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=57.4 pTM=0.395 ipTM=0.365 tol=1.6
2024-12-08 05:15:38,017 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=57.8 pTM=0.399 ipTM=0.38 tol=2.67
2024-12-08 05:15:48,150 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=57.5 pTM=0.392 ipTM=0.36 tol=2.09
2024-12-08 05:15:58,287 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=58 pTM=0.4 ipTM=0.388 tol=3.29
2024-12-08 05:16:08,420 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=58 pTM=0.395 ipTM=0.377 tol=3.9
2024-12-08 05:16:08,421 alphafold2_multimer_v3_model_5_seed_000 took 314.2s (30 recycles)
2024-12-08 05:16:08,717 reranking models by 'multimer' metric
2024-12-08 05:16:11,448 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-08 05:16:43,734 Relaxation took 35.0s
2024-12-08 05:16:43,734 rank_001_alphafold2_multimer_v3_model_5_seed_000 pLDDT=58 pTM=0.395 ipTM=0.377
2024-12-08 05:17:24,690 Relaxation took 41.0s
2024-12-08 05:17:24,690 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=58.4 pTM=0.395 ipTM=0.349
2024-12-08 05:18:00,574 Relaxation took 35.9s
2024-12-08 05:18:00,574 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=57.2 pTM=0.399 ipTM=0.297
2024-12-08 05:18:23,931 Relaxation took 23.4s
2024-12-08 05:18:23,931 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=58.5 pTM=0.379 ipTM=0.273
2024-12-08 05:19:06,767 Relaxation took 42.8s
2024-12-08 05:19:06,767 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=56.5 pTM=0.369 ipTM=0.275
2024-12-08 05:19:08,073 Done