2024-12-08 04:56:49,405 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-08 04:56:49,768 Running on GPU
2024-12-08 04:56:52,122 Found 6 citations for tools or databases
2024-12-08 04:56:52,122 Query 1/1: RNF149_TFB2M (length 796)
2024-12-08 04:56:52,397 Sleeping for 8s. Reason: PENDING
2024-12-08 04:57:00,651 Sleeping for 9s. Reason: RUNNING
2024-12-08 04:57:09,910 Sleeping for 7s. Reason: RUNNING
2024-12-08 04:57:17,170 Sleeping for 10s. Reason: RUNNING
2024-12-08 04:57:27,432 Sleeping for 8s. Reason: RUNNING
2024-12-08 04:57:35,702 Sleeping for 7s. Reason: RUNNING
2024-12-08 04:57:42,962 Sleeping for 7s. Reason: RUNNING
2024-12-08 04:57:50,223 Sleeping for 8s. Reason: RUNNING
2024-12-08 04:57:58,484 Sleeping for 8s. Reason: RUNNING
2024-12-08 04:58:06,740 Sleeping for 6s. Reason: RUNNING
2024-12-08 04:58:13,001 Sleeping for 8s. Reason: RUNNING
2024-12-08 04:58:21,266 Sleeping for 10s. Reason: RUNNING
2024-12-08 04:58:31,544 Sleeping for 6s. Reason: RUNNING
2024-12-08 04:58:37,802 Sleeping for 6s. Reason: RUNNING
2024-12-08 04:58:44,061 Sleeping for 7s. Reason: RUNNING
2024-12-08 04:58:51,327 Sleeping for 7s. Reason: RUNNING
2024-12-08 04:58:59,490 Sleeping for 6s. Reason: PENDING
2024-12-08 04:59:05,747 Sleeping for 9s. Reason: RUNNING
2024-12-08 04:59:15,008 Sleeping for 7s. Reason: RUNNING
2024-12-08 04:59:22,266 Sleeping for 5s. Reason: RUNNING
2024-12-08 04:59:27,523 Sleeping for 5s. Reason: RUNNING
2024-12-08 04:59:32,776 Sleeping for 7s. Reason: RUNNING
2024-12-08 04:59:40,032 Sleeping for 6s. Reason: RUNNING
2024-12-08 04:59:46,289 Sleeping for 5s. Reason: RUNNING
2024-12-08 04:59:51,545 Sleeping for 10s. Reason: RUNNING
2024-12-08 05:00:04,932 Setting max_seq=508, max_extra_seq=2048
2024-12-08 05:02:59,615 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=65.5 pTM=0.46 ipTM=0.14
2024-12-08 05:03:15,574 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=65.3 pTM=0.468 ipTM=0.147 tol=12.1
2024-12-08 05:03:31,537 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=65.1 pTM=0.469 ipTM=0.169 tol=6.19
2024-12-08 05:03:47,502 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=64.7 pTM=0.472 ipTM=0.194 tol=3.41
2024-12-08 05:04:03,472 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=65.1 pTM=0.472 ipTM=0.198 tol=3.1
2024-12-08 05:04:19,464 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=64.9 pTM=0.469 ipTM=0.176 tol=2.02
2024-12-08 05:04:35,441 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=64.7 pTM=0.467 ipTM=0.169 tol=2.42
2024-12-08 05:04:51,426 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=64.7 pTM=0.467 ipTM=0.161 tol=2.09
2024-12-08 05:05:07,402 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=64.6 pTM=0.468 ipTM=0.16 tol=3.5
2024-12-08 05:05:23,390 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=64.2 pTM=0.468 ipTM=0.157 tol=3.97
2024-12-08 05:05:39,370 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=64.3 pTM=0.468 ipTM=0.16 tol=6.73
2024-12-08 05:05:55,358 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=64.5 pTM=0.468 ipTM=0.16 tol=6.16
2024-12-08 05:06:11,331 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=64.5 pTM=0.47 ipTM=0.182 tol=3.67
2024-12-08 05:06:27,320 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=64.5 pTM=0.469 ipTM=0.197 tol=4.48
2024-12-08 05:06:43,312 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=64.6 pTM=0.471 ipTM=0.192 tol=4.54
2024-12-08 05:06:59,308 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=64.6 pTM=0.467 ipTM=0.17 tol=4.02
2024-12-08 05:07:15,303 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=64.6 pTM=0.467 ipTM=0.175 tol=2.96
2024-12-08 05:07:31,320 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=64.5 pTM=0.465 ipTM=0.159 tol=2.65
2024-12-08 05:07:47,313 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=64.4 pTM=0.465 ipTM=0.166 tol=2.36
2024-12-08 05:08:03,315 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=64.1 pTM=0.464 ipTM=0.158 tol=2.91
2024-12-08 05:08:19,330 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=64 pTM=0.466 ipTM=0.158 tol=2.95
2024-12-08 05:08:35,333 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=64 pTM=0.465 ipTM=0.153 tol=3.4
2024-12-08 05:08:51,343 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=63.8 pTM=0.466 ipTM=0.153 tol=5.28
2024-12-08 05:09:07,343 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=64.1 pTM=0.465 ipTM=0.154 tol=6.12
2024-12-08 05:09:23,358 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=64.3 pTM=0.468 ipTM=0.176 tol=3.28
2024-12-08 05:09:39,356 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=64.2 pTM=0.47 ipTM=0.213 tol=4.68
2024-12-08 05:09:55,354 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=64.4 pTM=0.47 ipTM=0.207 tol=5.32
2024-12-08 05:10:11,357 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=64.6 pTM=0.468 ipTM=0.193 tol=8.67
2024-12-08 05:10:27,347 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=64.5 pTM=0.469 ipTM=0.181 tol=4.01
2024-12-08 05:10:43,341 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=64.4 pTM=0.467 ipTM=0.17 tol=3.71
2024-12-08 05:10:59,339 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=64.6 pTM=0.465 ipTM=0.169 tol=4.6
2024-12-08 05:10:59,340 alphafold2_multimer_v3_model_1_seed_000 took 648.0s (30 recycles)
2024-12-08 05:11:15,863 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=64.9 pTM=0.469 ipTM=0.158
2024-12-08 05:11:31,919 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=65.8 pTM=0.469 ipTM=0.155 tol=7.5
2024-12-08 05:11:47,959 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=65.7 pTM=0.467 ipTM=0.147 tol=5.8
2024-12-08 05:12:04,005 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=66 pTM=0.46 ipTM=0.135 tol=6.31
2024-12-08 05:12:20,053 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=66.5 pTM=0.459 ipTM=0.135 tol=3.51
2024-12-08 05:12:36,119 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=66.7 pTM=0.458 ipTM=0.132 tol=4.48
2024-12-08 05:12:52,169 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=66.7 pTM=0.456 ipTM=0.129 tol=2.43
2024-12-08 05:13:08,225 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=66.9 pTM=0.456 ipTM=0.129 tol=2.89
2024-12-08 05:13:24,270 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=66.7 pTM=0.459 ipTM=0.135 tol=2.68
2024-12-08 05:13:40,322 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=66.8 pTM=0.462 ipTM=0.14 tol=3.57
2024-12-08 05:13:56,375 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=66.8 pTM=0.463 ipTM=0.144 tol=3.83
2024-12-08 05:14:12,434 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=66.8 pTM=0.467 ipTM=0.15 tol=2.54
2024-12-08 05:14:28,479 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=66.8 pTM=0.468 ipTM=0.152 tol=1.7
2024-12-08 05:14:44,528 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=66.9 pTM=0.468 ipTM=0.152 tol=2.16
2024-12-08 05:15:00,581 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=67.1 pTM=0.468 ipTM=0.153 tol=3.91
2024-12-08 05:15:16,630 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=66.9 pTM=0.469 ipTM=0.156 tol=3.9
2024-12-08 05:15:32,680 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=66.9 pTM=0.465 ipTM=0.148 tol=5.8
2024-12-08 05:15:48,728 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=66.8 pTM=0.467 ipTM=0.152 tol=4.46
2024-12-08 05:16:04,775 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=67 pTM=0.467 ipTM=0.152 tol=1.97
2024-12-08 05:16:20,837 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=67 pTM=0.465 ipTM=0.15 tol=1.6
2024-12-08 05:16:36,900 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=66.8 pTM=0.469 ipTM=0.155 tol=2.55
2024-12-08 05:16:52,966 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=66.8 pTM=0.468 ipTM=0.155 tol=2.1
2024-12-08 05:17:09,033 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=66.9 pTM=0.468 ipTM=0.155 tol=2.5
2024-12-08 05:17:25,113 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=66.9 pTM=0.469 ipTM=0.156 tol=5.04
2024-12-08 05:17:41,177 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=66.8 pTM=0.468 ipTM=0.155 tol=5.51
2024-12-08 05:17:57,235 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=66.7 pTM=0.467 ipTM=0.153 tol=1.94
2024-12-08 05:18:13,297 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=66.8 pTM=0.468 ipTM=0.154 tol=2.98
2024-12-08 05:18:29,363 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=66.8 pTM=0.466 ipTM=0.151 tol=2.06
2024-12-08 05:18:45,421 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=66.6 pTM=0.466 ipTM=0.15 tol=1.3
2024-12-08 05:19:01,486 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=66.8 pTM=0.469 ipTM=0.157 tol=1.83
2024-12-08 05:19:17,543 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=66.9 pTM=0.469 ipTM=0.156 tol=2.15
2024-12-08 05:19:17,543 alphafold2_multimer_v3_model_2_seed_000 took 497.7s (30 recycles)
2024-12-08 05:19:34,157 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=65.2 pTM=0.499 ipTM=0.47
2024-12-08 05:19:50,239 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=64.4 pTM=0.479 ipTM=0.297 tol=13.9
2024-12-08 05:20:06,302 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=63.7 pTM=0.486 ipTM=0.268 tol=8.83
2024-12-08 05:20:22,370 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=63.3 pTM=0.484 ipTM=0.233 tol=5.57
2024-12-08 05:20:38,425 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=63.6 pTM=0.494 ipTM=0.298 tol=4.95
2024-12-08 05:20:54,487 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=63.6 pTM=0.489 ipTM=0.251 tol=2.58
2024-12-08 05:21:10,558 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=63.6 pTM=0.494 ipTM=0.248 tol=5.84
2024-12-08 05:21:26,623 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=63.6 pTM=0.488 ipTM=0.24 tol=5.99
2024-12-08 05:21:42,688 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=63.7 pTM=0.494 ipTM=0.261 tol=4.61
2024-12-08 05:21:58,747 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=63.5 pTM=0.491 ipTM=0.251 tol=1.77
2024-12-08 05:22:14,812 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=63.6 pTM=0.492 ipTM=0.245 tol=3.56
2024-12-08 05:22:30,879 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=63.5 pTM=0.49 ipTM=0.236 tol=2.55
2024-12-08 05:22:46,948 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=63.6 pTM=0.492 ipTM=0.22 tol=2.13
2024-12-08 05:23:03,000 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=63.3 pTM=0.487 ipTM=0.208 tol=1.26
2024-12-08 05:23:19,057 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=63.4 pTM=0.493 ipTM=0.218 tol=1.66
2024-12-08 05:23:35,125 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=63 pTM=0.484 ipTM=0.198 tol=2.83
2024-12-08 05:23:51,191 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=63.3 pTM=0.49 ipTM=0.214 tol=1.46
2024-12-08 05:24:07,262 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=63.1 pTM=0.485 ipTM=0.193 tol=6.5
2024-12-08 05:24:23,329 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=63.5 pTM=0.488 ipTM=0.204 tol=5.95
2024-12-08 05:24:39,394 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=63.2 pTM=0.484 ipTM=0.198 tol=5.2
2024-12-08 05:24:55,458 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=63.2 pTM=0.491 ipTM=0.214 tol=2.2
2024-12-08 05:25:11,515 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=63.1 pTM=0.488 ipTM=0.212 tol=4.21
2024-12-08 05:25:27,575 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=63.2 pTM=0.49 ipTM=0.214 tol=4.66
2024-12-08 05:25:43,631 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=63.1 pTM=0.485 ipTM=0.191 tol=4.37
2024-12-08 05:25:59,690 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=63.3 pTM=0.493 ipTM=0.222 tol=1.91
2024-12-08 05:26:15,744 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=63 pTM=0.483 ipTM=0.198 tol=2.1
2024-12-08 05:26:31,804 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=63.2 pTM=0.488 ipTM=0.198 tol=1.88
2024-12-08 05:26:47,852 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=63.1 pTM=0.487 ipTM=0.21 tol=1.84
2024-12-08 05:27:03,911 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=63.2 pTM=0.492 ipTM=0.242 tol=1.15
2024-12-08 05:27:19,964 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=63.3 pTM=0.489 ipTM=0.223 tol=3.13
2024-12-08 05:27:36,012 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=63.4 pTM=0.49 ipTM=0.214 tol=2.59
2024-12-08 05:27:36,013 alphafold2_multimer_v3_model_3_seed_000 took 498.0s (30 recycles)
2024-12-08 05:27:52,552 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=64.8 pTM=0.499 ipTM=0.233
2024-12-08 05:28:08,621 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=64.9 pTM=0.46 ipTM=0.142 tol=17.5
2024-12-08 05:28:24,660 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=64.2 pTM=0.476 ipTM=0.17 tol=9.24
2024-12-08 05:28:40,739 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=64.8 pTM=0.471 ipTM=0.156 tol=9.91
2024-12-08 05:28:56,779 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=64.7 pTM=0.482 ipTM=0.18 tol=11.2
2024-12-08 05:29:12,831 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=64.3 pTM=0.483 ipTM=0.182 tol=5.9
2024-12-08 05:29:28,883 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=64.8 pTM=0.488 ipTM=0.192 tol=4.82
2024-12-08 05:29:44,938 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=64.5 pTM=0.48 ipTM=0.177 tol=2.91
2024-12-08 05:30:00,984 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=64.7 pTM=0.484 ipTM=0.183 tol=2.67
2024-12-08 05:30:17,032 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=64.5 pTM=0.483 ipTM=0.181 tol=2.55
2024-12-08 05:30:33,084 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=64.4 pTM=0.485 ipTM=0.186 tol=3.37
2024-12-08 05:30:49,139 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=64.3 pTM=0.482 ipTM=0.18 tol=3.83
2024-12-08 05:31:05,179 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=64.6 pTM=0.486 ipTM=0.186 tol=3.33
2024-12-08 05:31:21,243 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=64.4 pTM=0.479 ipTM=0.174 tol=6.2
2024-12-08 05:31:37,306 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=64.7 pTM=0.485 ipTM=0.185 tol=4.39
2024-12-08 05:31:53,377 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=64.7 pTM=0.479 ipTM=0.175 tol=3.34
2024-12-08 05:32:09,437 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=64.6 pTM=0.482 ipTM=0.178 tol=1.99
2024-12-08 05:32:25,501 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=64.7 pTM=0.482 ipTM=0.18 tol=2.15
2024-12-08 05:32:41,557 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=64.8 pTM=0.481 ipTM=0.178 tol=4.1
2024-12-08 05:32:57,602 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=64.3 pTM=0.483 ipTM=0.184 tol=4.59
2024-12-08 05:33:13,656 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=64.4 pTM=0.48 ipTM=0.176 tol=4.55
2024-12-08 05:33:29,705 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=64.6 pTM=0.481 ipTM=0.179 tol=3.23
2024-12-08 05:33:45,758 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=64.4 pTM=0.483 ipTM=0.181 tol=2.79
2024-12-08 05:34:01,793 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=64.2 pTM=0.489 ipTM=0.194 tol=4.9
2024-12-08 05:34:17,834 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=64.2 pTM=0.483 ipTM=0.182 tol=3.62
2024-12-08 05:34:33,893 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=64.4 pTM=0.486 ipTM=0.188 tol=2.54
2024-12-08 05:34:49,914 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=64.2 pTM=0.482 ipTM=0.182 tol=3.34
2024-12-08 05:35:05,941 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=64.1 pTM=0.488 ipTM=0.193 tol=3.24
2024-12-08 05:35:21,972 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=64.2 pTM=0.482 ipTM=0.182 tol=2.69
2024-12-08 05:35:38,016 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=64.1 pTM=0.485 ipTM=0.187 tol=3.17
2024-12-08 05:35:54,070 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=64.7 pTM=0.482 ipTM=0.179 tol=5.02
2024-12-08 05:35:54,071 alphafold2_multimer_v3_model_4_seed_000 took 497.5s (30 recycles)
2024-12-08 05:36:10,678 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=63.3 pTM=0.46 ipTM=0.14
2024-12-08 05:36:26,784 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=63.1 pTM=0.466 ipTM=0.149 tol=10.3
2024-12-08 05:36:42,887 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=63.1 pTM=0.467 ipTM=0.152 tol=7.4
2024-12-08 05:36:58,987 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=63.1 pTM=0.471 ipTM=0.19 tol=5.14
2024-12-08 05:37:15,092 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=63.6 pTM=0.475 ipTM=0.21 tol=5.41
2024-12-08 05:37:31,197 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=63.7 pTM=0.472 ipTM=0.185 tol=3.38
2024-12-08 05:37:47,305 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=63.6 pTM=0.47 ipTM=0.168 tol=4.19
2024-12-08 05:38:03,393 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=63.7 pTM=0.476 ipTM=0.222 tol=4.89
2024-12-08 05:38:19,491 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=63.5 pTM=0.475 ipTM=0.201 tol=10.7
2024-12-08 05:38:35,589 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=63.6 pTM=0.472 ipTM=0.174 tol=7.19
2024-12-08 05:38:51,668 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=63.2 pTM=0.476 ipTM=0.183 tol=5.98
2024-12-08 05:39:07,751 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=63.2 pTM=0.48 ipTM=0.192 tol=10.8
2024-12-08 05:39:23,844 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=63.4 pTM=0.481 ipTM=0.209 tol=4.09
2024-12-08 05:39:39,916 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=63.2 pTM=0.478 ipTM=0.182 tol=8.1
2024-12-08 05:39:55,994 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=63.6 pTM=0.475 ipTM=0.17 tol=5.09
2024-12-08 05:40:12,082 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=63.4 pTM=0.476 ipTM=0.173 tol=3.82
2024-12-08 05:40:28,167 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=63.2 pTM=0.481 ipTM=0.188 tol=3.52
2024-12-08 05:40:44,257 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=63.5 pTM=0.478 ipTM=0.179 tol=6.51
2024-12-08 05:41:00,331 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=63.4 pTM=0.477 ipTM=0.177 tol=6.19
2024-12-08 05:41:16,413 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=63.5 pTM=0.48 ipTM=0.197 tol=4.15
2024-12-08 05:41:32,486 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=63.4 pTM=0.477 ipTM=0.177 tol=2.15
2024-12-08 05:41:48,571 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=63.4 pTM=0.478 ipTM=0.177 tol=5.32
2024-12-08 05:42:04,635 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=63.2 pTM=0.479 ipTM=0.182 tol=2.84
2024-12-08 05:42:20,721 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=63.3 pTM=0.479 ipTM=0.179 tol=5.45
2024-12-08 05:42:36,794 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=63.1 pTM=0.481 ipTM=0.193 tol=4.28
2024-12-08 05:42:52,885 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=63.4 pTM=0.481 ipTM=0.204 tol=6.27
2024-12-08 05:43:08,955 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=63 pTM=0.478 ipTM=0.195 tol=5.6
2024-12-08 05:43:25,001 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=63.4 pTM=0.48 ipTM=0.191 tol=7.3
2024-12-08 05:43:41,056 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=62.9 pTM=0.479 ipTM=0.2 tol=6.13
2024-12-08 05:43:57,120 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=63.4 pTM=0.486 ipTM=0.213 tol=7.45
2024-12-08 05:44:13,175 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=63.2 pTM=0.478 ipTM=0.193 tol=7.53
2024-12-08 05:44:13,175 alphafold2_multimer_v3_model_5_seed_000 took 498.6s (30 recycles)
2024-12-08 05:44:13,685 reranking models by 'multimer' metric
2024-12-08 05:44:17,028 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-08 05:45:17,911 Relaxation took 64.2s
2024-12-08 05:45:17,911 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=63.4 pTM=0.49 ipTM=0.214
2024-12-08 05:46:19,258 Relaxation took 61.3s
2024-12-08 05:46:19,258 rank_002_alphafold2_multimer_v3_model_5_seed_000 pLDDT=63.2 pTM=0.478 ipTM=0.193
2024-12-08 05:47:18,868 Relaxation took 59.6s
2024-12-08 05:47:18,868 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=64.7 pTM=0.482 ipTM=0.179
2024-12-08 05:48:51,157 Relaxation took 92.3s
2024-12-08 05:48:51,157 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=64.6 pTM=0.465 ipTM=0.169
2024-12-08 05:49:49,803 Relaxation took 58.6s
2024-12-08 05:49:49,803 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=66.9 pTM=0.469 ipTM=0.156
2024-12-08 05:49:51,532 Done