2024-12-08 05:00:33,127 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-08 05:00:33,445 Running on GPU
2024-12-08 05:00:35,832 Found 6 citations for tools or databases
2024-12-08 05:00:35,832 Query 1/1: RNF14_AKT1 (length 954)
2024-12-08 05:00:36,138 Sleeping for 9s. Reason: PENDING
2024-12-08 05:00:45,395 Sleeping for 6s. Reason: RUNNING
2024-12-08 05:00:51,655 Sleeping for 7s. Reason: RUNNING
2024-12-08 05:00:58,912 Sleeping for 7s. Reason: RUNNING
2024-12-08 05:01:06,172 Sleeping for 7s. Reason: RUNNING
2024-12-08 05:01:13,430 Sleeping for 9s. Reason: RUNNING
2024-12-08 05:01:22,686 Sleeping for 8s. Reason: RUNNING
2024-12-08 05:01:30,950 Sleeping for 5s. Reason: RUNNING
2024-12-08 05:01:36,206 Sleeping for 5s. Reason: RUNNING
2024-12-08 05:01:41,463 Sleeping for 5s. Reason: RUNNING
2024-12-08 05:01:46,722 Sleeping for 7s. Reason: RUNNING
2024-12-08 05:01:53,987 Sleeping for 7s. Reason: RUNNING
2024-12-08 05:02:01,251 Sleeping for 6s. Reason: RUNNING
2024-12-08 05:02:07,505 Sleeping for 5s. Reason: RUNNING
2024-12-08 05:02:12,762 Sleeping for 5s. Reason: RUNNING
2024-12-08 05:02:18,018 Sleeping for 8s. Reason: RUNNING
2024-12-08 05:02:26,274 Sleeping for 10s. Reason: RUNNING
2024-12-08 05:02:36,533 Sleeping for 7s. Reason: RUNNING
2024-12-08 05:02:43,791 Sleeping for 6s. Reason: RUNNING
2024-12-08 05:02:50,049 Sleeping for 6s. Reason: RUNNING
2024-12-08 05:02:56,303 Sleeping for 7s. Reason: RUNNING
2024-12-08 05:03:03,565 Sleeping for 10s. Reason: RUNNING
2024-12-08 05:03:13,824 Sleeping for 5s. Reason: RUNNING
2024-12-08 05:03:19,078 Sleeping for 7s. Reason: RUNNING
2024-12-08 05:03:26,338 Sleeping for 7s. Reason: RUNNING
2024-12-08 05:03:33,596 Sleeping for 7s. Reason: RUNNING
2024-12-08 05:03:40,847 Sleeping for 9s. Reason: RUNNING
2024-12-08 05:03:50,114 Sleeping for 6s. Reason: RUNNING
2024-12-08 05:03:56,369 Sleeping for 7s. Reason: RUNNING
2024-12-08 05:04:03,624 Sleeping for 8s. Reason: RUNNING
2024-12-08 05:04:11,881 Sleeping for 5s. Reason: RUNNING
2024-12-08 05:04:17,148 Sleeping for 5s. Reason: RUNNING
2024-12-08 05:04:22,407 Sleeping for 10s. Reason: RUNNING
2024-12-08 05:04:32,663 Sleeping for 8s. Reason: RUNNING
2024-12-08 05:04:43,011 Sleeping for 8s. Reason: PENDING
2024-12-08 05:04:51,267 Sleeping for 8s. Reason: RUNNING
2024-12-08 05:04:59,522 Sleeping for 9s. Reason: RUNNING
2024-12-08 05:05:08,780 Sleeping for 8s. Reason: RUNNING
2024-12-08 05:05:17,047 Sleeping for 10s. Reason: RUNNING
2024-12-08 05:05:27,313 Sleeping for 8s. Reason: RUNNING
2024-12-08 05:05:35,575 Sleeping for 5s. Reason: RUNNING
2024-12-08 05:05:40,828 Sleeping for 8s. Reason: RUNNING
2024-12-08 05:05:49,092 Sleeping for 6s. Reason: RUNNING
2024-12-08 05:05:55,345 Sleeping for 7s. Reason: RUNNING
2024-12-08 05:06:02,603 Sleeping for 7s. Reason: RUNNING
2024-12-08 05:06:09,860 Sleeping for 8s. Reason: RUNNING
2024-12-08 05:06:18,119 Sleeping for 7s. Reason: RUNNING
2024-12-08 05:06:25,383 Sleeping for 5s. Reason: RUNNING
2024-12-08 05:06:30,638 Sleeping for 9s. Reason: RUNNING
2024-12-08 05:06:39,905 Sleeping for 10s. Reason: RUNNING
2024-12-08 05:06:50,165 Sleeping for 8s. Reason: RUNNING
2024-12-08 05:06:58,425 Sleeping for 5s. Reason: RUNNING
2024-12-08 05:07:09,013 Setting max_seq=508, max_extra_seq=2048
2024-12-08 05:09:55,222 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=66.4 pTM=0.395 ipTM=0.146
2024-12-08 05:10:14,162 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=65.5 pTM=0.392 ipTM=0.145 tol=7.43
2024-12-08 05:10:33,149 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=66.1 pTM=0.396 ipTM=0.149 tol=4.81
2024-12-08 05:10:52,183 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=66.5 pTM=0.394 ipTM=0.148 tol=2.56
2024-12-08 05:11:11,233 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=67.3 pTM=0.394 ipTM=0.168 tol=3.24
2024-12-08 05:11:30,316 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=67.1 pTM=0.392 ipTM=0.168 tol=1.94
2024-12-08 05:11:49,396 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=67.6 pTM=0.393 ipTM=0.177 tol=2.46
2024-12-08 05:12:08,485 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=67.8 pTM=0.39 ipTM=0.183 tol=3.11
2024-12-08 05:12:27,606 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=68.1 pTM=0.391 ipTM=0.191 tol=3.6
2024-12-08 05:12:46,720 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=68.2 pTM=0.389 ipTM=0.187 tol=2.61
2024-12-08 05:13:05,842 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=68.5 pTM=0.393 ipTM=0.187 tol=1.3
2024-12-08 05:13:24,976 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=65.9 pTM=0.39 ipTM=0.174 tol=12.1
2024-12-08 05:13:44,107 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=67.1 pTM=0.388 ipTM=0.185 tol=6.61
2024-12-08 05:14:03,226 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=67.4 pTM=0.384 ipTM=0.19 tol=3.47
2024-12-08 05:14:22,337 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=67.2 pTM=0.385 ipTM=0.193 tol=3.18
2024-12-08 05:14:41,452 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=67.4 pTM=0.384 ipTM=0.193 tol=2.41
2024-12-08 05:15:00,571 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=68 pTM=0.391 ipTM=0.195 tol=3.14
2024-12-08 05:15:19,702 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=68.8 pTM=0.39 ipTM=0.185 tol=2.56
2024-12-08 05:15:38,824 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=67.9 pTM=0.387 ipTM=0.18 tol=1.31
2024-12-08 05:15:57,959 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=67.5 pTM=0.386 ipTM=0.183 tol=1.78
2024-12-08 05:16:17,100 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=67.6 pTM=0.386 ipTM=0.184 tol=1.83
2024-12-08 05:16:36,225 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=68.1 pTM=0.387 ipTM=0.187 tol=1.22
2024-12-08 05:16:55,367 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=68.8 pTM=0.392 ipTM=0.189 tol=3.38
2024-12-08 05:17:14,505 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=68.7 pTM=0.39 ipTM=0.18 tol=2.82
2024-12-08 05:17:33,652 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=68.2 pTM=0.387 ipTM=0.181 tol=1.16
2024-12-08 05:17:52,793 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=68.1 pTM=0.387 ipTM=0.187 tol=1.22
2024-12-08 05:18:11,922 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=68.6 pTM=0.392 ipTM=0.191 tol=2.59
2024-12-08 05:18:31,050 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=67.8 pTM=0.386 ipTM=0.183 tol=1.2
2024-12-08 05:18:50,182 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=68.4 pTM=0.389 ipTM=0.189 tol=1.75
2024-12-08 05:19:09,304 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=68.1 pTM=0.387 ipTM=0.189 tol=2.46
2024-12-08 05:19:28,446 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=68.3 pTM=0.388 ipTM=0.191 tol=1.94
2024-12-08 05:19:28,447 alphafold2_multimer_v3_model_1_seed_000 took 734.6s (30 recycles)
2024-12-08 05:19:48,160 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=69.3 pTM=0.401 ipTM=0.141
2024-12-08 05:20:07,291 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=67.3 pTM=0.389 ipTM=0.135 tol=6.07
2024-12-08 05:20:26,424 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=68.8 pTM=0.394 ipTM=0.157 tol=11.2
2024-12-08 05:20:45,558 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=69 pTM=0.392 ipTM=0.171 tol=3.64
2024-12-08 05:21:04,674 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=69.4 pTM=0.394 ipTM=0.172 tol=2.17
2024-12-08 05:21:23,812 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=69.4 pTM=0.392 ipTM=0.172 tol=1.95
2024-12-08 05:21:42,940 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=69.6 pTM=0.393 ipTM=0.178 tol=1.2
2024-12-08 05:22:02,066 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=69.9 pTM=0.393 ipTM=0.177 tol=0.958
2024-12-08 05:22:21,198 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=69.8 pTM=0.394 ipTM=0.177 tol=1.6
2024-12-08 05:22:40,341 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=69.5 pTM=0.392 ipTM=0.184 tol=1.9
2024-12-08 05:22:59,474 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=69.5 pTM=0.393 ipTM=0.187 tol=1.25
2024-12-08 05:23:18,613 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=69.4 pTM=0.392 ipTM=0.192 tol=1.55
2024-12-08 05:23:37,753 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=69.4 pTM=0.391 ipTM=0.19 tol=0.883
2024-12-08 05:23:56,891 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=69.4 pTM=0.39 ipTM=0.197 tol=2.24
2024-12-08 05:24:16,030 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=69.2 pTM=0.393 ipTM=0.204 tol=1.94
2024-12-08 05:24:35,150 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=69.2 pTM=0.39 ipTM=0.196 tol=2.36
2024-12-08 05:24:54,279 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=69.2 pTM=0.391 ipTM=0.197 tol=1.9
2024-12-08 05:25:13,391 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=68.6 pTM=0.389 ipTM=0.199 tol=2.73
2024-12-08 05:25:32,504 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=69.1 pTM=0.389 ipTM=0.187 tol=1.84
2024-12-08 05:25:51,632 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=69.1 pTM=0.389 ipTM=0.193 tol=1.86
2024-12-08 05:26:10,732 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=69.3 pTM=0.389 ipTM=0.184 tol=1.06
2024-12-08 05:26:29,832 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=68.8 pTM=0.387 ipTM=0.191 tol=2.32
2024-12-08 05:26:48,933 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=69.1 pTM=0.39 ipTM=0.187 tol=2.22
2024-12-08 05:27:08,027 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=68.8 pTM=0.388 ipTM=0.193 tol=1.21
2024-12-08 05:27:27,123 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=68.8 pTM=0.388 ipTM=0.189 tol=1.85
2024-12-08 05:27:46,214 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=68.8 pTM=0.39 ipTM=0.198 tol=1.4
2024-12-08 05:28:05,305 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=68.8 pTM=0.389 ipTM=0.192 tol=1.52
2024-12-08 05:28:24,394 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=68.4 pTM=0.387 ipTM=0.196 tol=1.02
2024-12-08 05:28:43,499 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=69.4 pTM=0.391 ipTM=0.191 tol=1.03
2024-12-08 05:29:02,593 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=68.7 pTM=0.387 ipTM=0.194 tol=1.44
2024-12-08 05:29:21,687 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=69 pTM=0.389 ipTM=0.19 tol=1.09
2024-12-08 05:29:21,688 alphafold2_multimer_v3_model_2_seed_000 took 592.7s (30 recycles)
2024-12-08 05:29:41,403 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=67.8 pTM=0.395 ipTM=0.143
2024-12-08 05:30:00,541 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=68.2 pTM=0.395 ipTM=0.153 tol=5.89
2024-12-08 05:30:19,683 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=67.6 pTM=0.395 ipTM=0.138 tol=4.7
2024-12-08 05:30:38,824 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=67.6 pTM=0.397 ipTM=0.143 tol=3.1
2024-12-08 05:30:57,974 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=68.1 pTM=0.396 ipTM=0.141 tol=1.88
2024-12-08 05:31:17,115 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=68 pTM=0.399 ipTM=0.151 tol=1.42
2024-12-08 05:31:36,261 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=68.1 pTM=0.397 ipTM=0.145 tol=2.36
2024-12-08 05:31:55,399 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=68.1 pTM=0.399 ipTM=0.153 tol=3.36
2024-12-08 05:32:14,532 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=67.8 pTM=0.394 ipTM=0.141 tol=3.23
2024-12-08 05:32:33,674 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=68.1 pTM=0.397 ipTM=0.153 tol=1.8
2024-12-08 05:32:52,806 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=68.2 pTM=0.397 ipTM=0.149 tol=3.95
2024-12-08 05:33:11,944 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=67.9 pTM=0.397 ipTM=0.147 tol=3.12
2024-12-08 05:33:31,088 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=68.2 pTM=0.394 ipTM=0.139 tol=4.18
2024-12-08 05:33:50,228 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=68.1 pTM=0.395 ipTM=0.149 tol=2.04
2024-12-08 05:34:09,356 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=68.1 pTM=0.394 ipTM=0.146 tol=2.62
2024-12-08 05:34:28,500 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=67.9 pTM=0.394 ipTM=0.153 tol=2.59
2024-12-08 05:34:47,640 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=68.3 pTM=0.394 ipTM=0.144 tol=2.18
2024-12-08 05:35:06,768 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=68.2 pTM=0.396 ipTM=0.15 tol=2.29
2024-12-08 05:35:25,893 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=68 pTM=0.395 ipTM=0.142 tol=1.89
2024-12-08 05:35:45,039 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=68.2 pTM=0.395 ipTM=0.141 tol=2.55
2024-12-08 05:36:04,167 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=68.3 pTM=0.396 ipTM=0.141 tol=2.75
2024-12-08 05:36:23,312 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=68.3 pTM=0.394 ipTM=0.144 tol=3.02
2024-12-08 05:36:42,454 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=68.2 pTM=0.395 ipTM=0.137 tol=2.49
2024-12-08 05:37:01,606 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=67.9 pTM=0.394 ipTM=0.137 tol=3.03
2024-12-08 05:37:20,747 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=67.9 pTM=0.393 ipTM=0.137 tol=2.97
2024-12-08 05:37:39,899 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=68.1 pTM=0.394 ipTM=0.14 tol=3.41
2024-12-08 05:37:59,040 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=67.6 pTM=0.393 ipTM=0.141 tol=1.88
2024-12-08 05:38:18,195 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=67.8 pTM=0.394 ipTM=0.143 tol=2.94
2024-12-08 05:38:37,335 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=67.4 pTM=0.392 ipTM=0.139 tol=2.46
2024-12-08 05:38:56,485 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=67.9 pTM=0.392 ipTM=0.14 tol=2.37
2024-12-08 05:39:15,632 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=67.8 pTM=0.39 ipTM=0.135 tol=2.76
2024-12-08 05:39:15,633 alphafold2_multimer_v3_model_3_seed_000 took 593.4s (30 recycles)
2024-12-08 05:39:35,349 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=65.8 pTM=0.382 ipTM=0.138
2024-12-08 05:39:54,488 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=64.5 pTM=0.379 ipTM=0.138 tol=5.74
2024-12-08 05:40:13,634 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=65.9 pTM=0.386 ipTM=0.14 tol=3.93
2024-12-08 05:40:32,778 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=65.4 pTM=0.382 ipTM=0.139 tol=2.28
2024-12-08 05:40:51,933 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=65.8 pTM=0.382 ipTM=0.138 tol=3.1
2024-12-08 05:41:11,073 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=65.6 pTM=0.384 ipTM=0.138 tol=1.88
2024-12-08 05:41:30,226 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=65.8 pTM=0.385 ipTM=0.137 tol=2.55
2024-12-08 05:41:49,369 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=66.1 pTM=0.387 ipTM=0.138 tol=2.17
2024-12-08 05:42:08,513 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=65.6 pTM=0.383 ipTM=0.14 tol=2.11
2024-12-08 05:42:27,664 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=65.8 pTM=0.385 ipTM=0.145 tol=2.72
2024-12-08 05:42:46,818 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=65.7 pTM=0.386 ipTM=0.144 tol=2.66
2024-12-08 05:43:05,961 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=65.9 pTM=0.388 ipTM=0.147 tol=2.36
2024-12-08 05:43:25,107 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=66.2 pTM=0.386 ipTM=0.143 tol=2.32
2024-12-08 05:43:44,251 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=65.9 pTM=0.386 ipTM=0.149 tol=2.53
2024-12-08 05:44:03,392 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=65.8 pTM=0.384 ipTM=0.148 tol=2.24
2024-12-08 05:44:22,534 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=65.6 pTM=0.384 ipTM=0.148 tol=2.47
2024-12-08 05:44:41,672 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=66.1 pTM=0.386 ipTM=0.146 tol=2.56
2024-12-08 05:45:00,808 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=66 pTM=0.387 ipTM=0.146 tol=2.73
2024-12-08 05:45:19,934 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=66.1 pTM=0.389 ipTM=0.145 tol=2.54
2024-12-08 05:45:39,068 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=66 pTM=0.39 ipTM=0.142 tol=2.19
2024-12-08 05:45:58,207 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=66.1 pTM=0.391 ipTM=0.145 tol=2.1
2024-12-08 05:46:17,339 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=65.6 pTM=0.389 ipTM=0.147 tol=2.39
2024-12-08 05:46:36,470 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=65.9 pTM=0.392 ipTM=0.142 tol=2.32
2024-12-08 05:46:55,600 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=65.6 pTM=0.389 ipTM=0.146 tol=2.38
2024-12-08 05:47:14,740 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=65.8 pTM=0.387 ipTM=0.147 tol=2.08
2024-12-08 05:47:33,883 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=65.8 pTM=0.388 ipTM=0.149 tol=1.54
2024-12-08 05:47:53,018 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=65.4 pTM=0.387 ipTM=0.146 tol=1.77
2024-12-08 05:48:12,146 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=66 pTM=0.396 ipTM=0.148 tol=2.38
2024-12-08 05:48:31,276 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=66.2 pTM=0.393 ipTM=0.145 tol=2.15
2024-12-08 05:48:50,406 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=65.7 pTM=0.385 ipTM=0.148 tol=2.06
2024-12-08 05:49:09,557 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=65.9 pTM=0.386 ipTM=0.146 tol=2.03
2024-12-08 05:49:09,558 alphafold2_multimer_v3_model_4_seed_000 took 593.4s (30 recycles)
2024-12-08 05:49:29,263 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=66.8 pTM=0.395 ipTM=0.149
2024-12-08 05:49:48,415 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=66.6 pTM=0.39 ipTM=0.142 tol=3.42
2024-12-08 05:50:07,577 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=67.4 pTM=0.389 ipTM=0.139 tol=4.64
2024-12-08 05:50:26,738 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=67.9 pTM=0.397 ipTM=0.137 tol=3.03
2024-12-08 05:50:45,907 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=69.6 pTM=0.402 ipTM=0.137 tol=2.49
2024-12-08 05:51:05,062 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=69.1 pTM=0.401 ipTM=0.139 tol=2.01
2024-12-08 05:51:24,233 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=68.6 pTM=0.396 ipTM=0.14 tol=1.58
2024-12-08 05:51:43,375 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=68.2 pTM=0.395 ipTM=0.143 tol=2.03
2024-12-08 05:52:02,513 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=67.8 pTM=0.392 ipTM=0.143 tol=1.97
2024-12-08 05:52:21,643 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=67.9 pTM=0.393 ipTM=0.145 tol=1.36
2024-12-08 05:52:40,781 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=68.2 pTM=0.394 ipTM=0.146 tol=1.05
2024-12-08 05:52:59,902 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=67.4 pTM=0.39 ipTM=0.146 tol=1.01
2024-12-08 05:53:19,063 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=68.8 pTM=0.399 ipTM=0.137 tol=3.01
2024-12-08 05:53:38,189 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=68.1 pTM=0.393 ipTM=0.145 tol=2.27
2024-12-08 05:53:57,325 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=67.6 pTM=0.392 ipTM=0.147 tol=2.2
2024-12-08 05:54:16,465 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=67.8 pTM=0.392 ipTM=0.146 tol=0.84
2024-12-08 05:54:35,614 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=67.9 pTM=0.391 ipTM=0.142 tol=2.7
2024-12-08 05:54:54,763 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=68.3 pTM=0.395 ipTM=0.144 tol=1.78
2024-12-08 05:55:13,893 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=68.1 pTM=0.394 ipTM=0.146 tol=2.14
2024-12-08 05:55:33,034 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=67.4 pTM=0.388 ipTM=0.153 tol=1.37
2024-12-08 05:55:52,178 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=68.5 pTM=0.397 ipTM=0.15 tol=1.41
2024-12-08 05:56:11,321 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=67.8 pTM=0.39 ipTM=0.156 tol=1.72
2024-12-08 05:56:30,460 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=68.2 pTM=0.397 ipTM=0.159 tol=1.43
2024-12-08 05:56:49,599 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=67.2 pTM=0.387 ipTM=0.153 tol=1.68
2024-12-08 05:57:08,755 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=68.3 pTM=0.397 ipTM=0.145 tol=1.06
2024-12-08 05:57:27,888 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=68.1 pTM=0.393 ipTM=0.151 tol=2.15
2024-12-08 05:57:47,025 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=67.8 pTM=0.39 ipTM=0.147 tol=1.38
2024-12-08 05:58:06,153 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=68.3 pTM=0.396 ipTM=0.157 tol=2.45
2024-12-08 05:58:25,275 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=67.8 pTM=0.393 ipTM=0.155 tol=2.26
2024-12-08 05:58:44,396 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=67.9 pTM=0.395 ipTM=0.164 tol=1.42
2024-12-08 05:59:03,499 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=67.7 pTM=0.391 ipTM=0.157 tol=1.48
2024-12-08 05:59:03,500 alphafold2_multimer_v3_model_5_seed_000 took 593.4s (30 recycles)
2024-12-08 05:59:04,065 reranking models by 'multimer' metric
2024-12-08 05:59:06,236 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-08 06:00:41,723 Relaxation took 97.7s
2024-12-08 06:00:41,723 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=68.3 pTM=0.388 ipTM=0.191
2024-12-08 06:01:19,849 Relaxation took 38.1s
2024-12-08 06:01:19,849 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=69 pTM=0.389 ipTM=0.19
2024-12-08 06:03:10,827 Relaxation took 111.0s
2024-12-08 06:03:10,827 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=67.7 pTM=0.391 ipTM=0.157
2024-12-08 06:04:33,067 Relaxation took 82.2s
2024-12-08 06:04:33,067 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=65.9 pTM=0.386 ipTM=0.146
2024-12-08 06:06:03,700 Relaxation took 90.6s
2024-12-08 06:06:03,700 rank_005_alphafold2_multimer_v3_model_3_seed_000 pLDDT=67.8 pTM=0.39 ipTM=0.135
2024-12-08 06:06:05,486 Done