2024-12-08 06:23:12,579 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-08 06:23:12,876 Running on GPU
2024-12-08 06:23:15,478 Found 6 citations for tools or databases
2024-12-08 06:23:15,478 Query 1/1: RNF181_AKIRIN1 (length 345)
2024-12-08 06:23:15,770 Sleeping for 5s. Reason: PENDING
2024-12-08 06:23:21,029 Sleeping for 7s. Reason: RUNNING
2024-12-08 06:23:28,286 Sleeping for 7s. Reason: RUNNING
2024-12-08 06:23:35,538 Sleeping for 7s. Reason: RUNNING
2024-12-08 06:23:42,788 Sleeping for 9s. Reason: RUNNING
2024-12-08 06:23:52,055 Sleeping for 6s. Reason: RUNNING
2024-12-08 06:23:58,315 Sleeping for 10s. Reason: RUNNING
2024-12-08 06:24:08,581 Sleeping for 6s. Reason: RUNNING
2024-12-08 06:24:16,002 Sleeping for 5s. Reason: PENDING
2024-12-08 06:24:21,266 Sleeping for 8s. Reason: RUNNING
2024-12-08 06:24:29,521 Sleeping for 10s. Reason: RUNNING
2024-12-08 06:24:39,790 Sleeping for 10s. Reason: RUNNING
2024-12-08 06:24:50,057 Sleeping for 5s. Reason: RUNNING
2024-12-08 06:24:56,918 Setting max_seq=508, max_extra_seq=2048
2024-12-08 06:27:47,971 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=47.8 pTM=0.31 ipTM=0.121
2024-12-08 06:27:51,149 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=50.7 pTM=0.321 ipTM=0.119 tol=7
2024-12-08 06:27:54,322 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=53 pTM=0.328 ipTM=0.122 tol=4.7
2024-12-08 06:27:57,489 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=53.6 pTM=0.333 ipTM=0.12 tol=2.67
2024-12-08 06:28:00,657 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=54.6 pTM=0.334 ipTM=0.122 tol=2.88
2024-12-08 06:28:03,822 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=54 pTM=0.337 ipTM=0.116 tol=2.07
2024-12-08 06:28:06,987 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=54.6 pTM=0.338 ipTM=0.117 tol=1.49
2024-12-08 06:28:10,150 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=54.9 pTM=0.338 ipTM=0.133 tol=4.21
2024-12-08 06:28:13,310 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=54.3 pTM=0.338 ipTM=0.13 tol=2.68
2024-12-08 06:28:16,474 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=55.7 pTM=0.343 ipTM=0.141 tol=1.88
2024-12-08 06:28:19,640 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=56 pTM=0.34 ipTM=0.143 tol=3.23
2024-12-08 06:28:22,805 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=57 pTM=0.342 ipTM=0.163 tol=3.53
2024-12-08 06:28:25,967 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=56.1 pTM=0.342 ipTM=0.159 tol=2.14
2024-12-08 06:28:29,130 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=57 pTM=0.343 ipTM=0.163 tol=2.44
2024-12-08 06:28:32,294 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=56.3 pTM=0.341 ipTM=0.159 tol=2.51
2024-12-08 06:28:35,459 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=57.3 pTM=0.345 ipTM=0.169 tol=2.94
2024-12-08 06:28:38,621 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=56.8 pTM=0.343 ipTM=0.174 tol=1.3
2024-12-08 06:28:41,786 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=57.2 pTM=0.344 ipTM=0.172 tol=1.44
2024-12-08 06:28:44,950 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=57.2 pTM=0.346 ipTM=0.17 tol=1.63
2024-12-08 06:28:48,113 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=57 pTM=0.344 ipTM=0.172 tol=1.37
2024-12-08 06:28:51,279 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=56 pTM=0.34 ipTM=0.157 tol=1.94
2024-12-08 06:28:54,444 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=56.5 pTM=0.341 ipTM=0.164 tol=1.06
2024-12-08 06:28:57,606 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=56.4 pTM=0.343 ipTM=0.158 tol=1.32
2024-12-08 06:29:00,772 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=56.4 pTM=0.336 ipTM=0.151 tol=1.38
2024-12-08 06:29:03,936 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=55.7 pTM=0.337 ipTM=0.151 tol=1.72
2024-12-08 06:29:07,101 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=56.9 pTM=0.345 ipTM=0.172 tol=1.85
2024-12-08 06:29:10,268 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=55.8 pTM=0.341 ipTM=0.157 tol=1.47
2024-12-08 06:29:13,432 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=56.3 pTM=0.339 ipTM=0.149 tol=1.69
2024-12-08 06:29:16,597 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=56.3 pTM=0.341 ipTM=0.148 tol=2.35
2024-12-08 06:29:19,762 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=56.2 pTM=0.339 ipTM=0.156 tol=1.68
2024-12-08 06:29:22,925 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=55.6 pTM=0.337 ipTM=0.148 tol=1.65
2024-12-08 06:29:22,925 alphafold2_multimer_v3_model_1_seed_000 took 261.1s (30 recycles)
2024-12-08 06:29:26,190 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=51.5 pTM=0.321 ipTM=0.128
2024-12-08 06:29:29,356 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=55.1 pTM=0.331 ipTM=0.129 tol=10.6
2024-12-08 06:29:32,517 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=55.5 pTM=0.333 ipTM=0.13 tol=8.3
2024-12-08 06:29:35,678 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=57.1 pTM=0.357 ipTM=0.192 tol=7.61
2024-12-08 06:29:38,840 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=56.5 pTM=0.357 ipTM=0.176 tol=3.9
2024-12-08 06:29:42,000 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=57.2 pTM=0.375 ipTM=0.208 tol=2.61
2024-12-08 06:29:45,160 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=57 pTM=0.363 ipTM=0.179 tol=1.62
2024-12-08 06:29:48,320 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=57.8 pTM=0.371 ipTM=0.215 tol=2.42
2024-12-08 06:29:51,479 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=56.9 pTM=0.361 ipTM=0.175 tol=2.4
2024-12-08 06:29:54,637 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=57.6 pTM=0.363 ipTM=0.193 tol=2.61
2024-12-08 06:29:57,799 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=57 pTM=0.365 ipTM=0.181 tol=1.42
2024-12-08 06:30:00,956 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=57.4 pTM=0.366 ipTM=0.198 tol=1.67
2024-12-08 06:30:04,116 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=56.9 pTM=0.367 ipTM=0.188 tol=2.07
2024-12-08 06:30:07,275 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=57.3 pTM=0.371 ipTM=0.206 tol=2.14
2024-12-08 06:30:10,434 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=57.8 pTM=0.367 ipTM=0.185 tol=3.03
2024-12-08 06:30:13,594 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=57.8 pTM=0.374 ipTM=0.215 tol=2.83
2024-12-08 06:30:16,753 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=57 pTM=0.371 ipTM=0.204 tol=2.28
2024-12-08 06:30:19,912 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=57.6 pTM=0.376 ipTM=0.235 tol=2.28
2024-12-08 06:30:23,071 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=57.3 pTM=0.37 ipTM=0.185 tol=1.39
2024-12-08 06:30:26,231 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=58.3 pTM=0.382 ipTM=0.236 tol=1.41
2024-12-08 06:30:29,388 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=57.9 pTM=0.373 ipTM=0.198 tol=1.24
2024-12-08 06:30:32,547 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=57.9 pTM=0.37 ipTM=0.217 tol=1.25
2024-12-08 06:30:35,705 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=57.6 pTM=0.376 ipTM=0.204 tol=0.893
2024-12-08 06:30:38,864 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=58.1 pTM=0.379 ipTM=0.239 tol=0.989
2024-12-08 06:30:42,023 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=57.3 pTM=0.371 ipTM=0.204 tol=1.29
2024-12-08 06:30:45,182 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=57.6 pTM=0.375 ipTM=0.23 tol=1.29
2024-12-08 06:30:48,341 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=57.7 pTM=0.374 ipTM=0.202 tol=1.3
2024-12-08 06:30:51,504 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=57.1 pTM=0.36 ipTM=0.174 tol=1.59
2024-12-08 06:30:54,665 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=57.5 pTM=0.368 ipTM=0.174 tol=1.24
2024-12-08 06:30:57,828 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=57.1 pTM=0.37 ipTM=0.204 tol=1.81
2024-12-08 06:31:00,991 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=57 pTM=0.371 ipTM=0.19 tol=2.53
2024-12-08 06:31:00,991 alphafold2_multimer_v3_model_2_seed_000 took 98.0s (30 recycles)
2024-12-08 06:31:04,260 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=48.8 pTM=0.319 ipTM=0.127
2024-12-08 06:31:07,441 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=50.7 pTM=0.315 ipTM=0.111 tol=8.09
2024-12-08 06:31:10,619 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=50.3 pTM=0.315 ipTM=0.128 tol=5.02
2024-12-08 06:31:13,793 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=50.7 pTM=0.319 ipTM=0.115 tol=8.9
2024-12-08 06:31:16,966 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=50.7 pTM=0.319 ipTM=0.127 tol=6.68
2024-12-08 06:31:20,139 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=50.3 pTM=0.323 ipTM=0.117 tol=5.81
2024-12-08 06:31:23,311 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=49.9 pTM=0.325 ipTM=0.129 tol=2.86
2024-12-08 06:31:26,480 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=50.4 pTM=0.322 ipTM=0.129 tol=3.61
2024-12-08 06:31:29,653 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=50.5 pTM=0.329 ipTM=0.141 tol=3.93
2024-12-08 06:31:32,822 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=51.4 pTM=0.337 ipTM=0.174 tol=3.65
2024-12-08 06:31:35,994 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=50.8 pTM=0.334 ipTM=0.15 tol=4.06
2024-12-08 06:31:39,165 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=50.3 pTM=0.323 ipTM=0.125 tol=2.43
2024-12-08 06:31:42,335 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=51.6 pTM=0.339 ipTM=0.163 tol=2.18
2024-12-08 06:31:45,505 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=51.8 pTM=0.338 ipTM=0.159 tol=3.19
2024-12-08 06:31:48,678 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=50.7 pTM=0.331 ipTM=0.142 tol=3.22
2024-12-08 06:31:51,849 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=51.5 pTM=0.335 ipTM=0.146 tol=3.35
2024-12-08 06:31:55,023 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=50.3 pTM=0.334 ipTM=0.145 tol=3.92
2024-12-08 06:31:58,194 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=50.8 pTM=0.331 ipTM=0.137 tol=3.64
2024-12-08 06:32:01,364 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=51.2 pTM=0.338 ipTM=0.157 tol=2.91
2024-12-08 06:32:04,533 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=51 pTM=0.337 ipTM=0.158 tol=3.32
2024-12-08 06:32:07,707 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=50.6 pTM=0.338 ipTM=0.155 tol=3.27
2024-12-08 06:32:10,877 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=51.1 pTM=0.339 ipTM=0.16 tol=3.26
2024-12-08 06:32:14,049 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=53 pTM=0.35 ipTM=0.181 tol=3.82
2024-12-08 06:32:17,218 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=51.8 pTM=0.336 ipTM=0.161 tol=2.25
2024-12-08 06:32:20,388 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=51.8 pTM=0.339 ipTM=0.162 tol=6.01
2024-12-08 06:32:23,555 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=52.5 pTM=0.335 ipTM=0.168 tol=5.7
2024-12-08 06:32:26,726 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=51.8 pTM=0.335 ipTM=0.167 tol=6.23
2024-12-08 06:32:29,895 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=52.5 pTM=0.344 ipTM=0.188 tol=5.84
2024-12-08 06:32:33,064 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=53.2 pTM=0.346 ipTM=0.198 tol=5.17
2024-12-08 06:32:36,232 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=51.4 pTM=0.33 ipTM=0.159 tol=2.05
2024-12-08 06:32:39,399 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=51.9 pTM=0.333 ipTM=0.165 tol=1.69
2024-12-08 06:32:39,399 alphafold2_multimer_v3_model_3_seed_000 took 98.3s (30 recycles)
2024-12-08 06:32:42,662 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=47.9 pTM=0.334 ipTM=0.149
2024-12-08 06:32:45,837 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=49.9 pTM=0.338 ipTM=0.132 tol=10.6
2024-12-08 06:32:49,004 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=52.8 pTM=0.326 ipTM=0.152 tol=10.2
2024-12-08 06:32:52,174 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=52 pTM=0.33 ipTM=0.144 tol=3.74
2024-12-08 06:32:55,343 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=53 pTM=0.329 ipTM=0.157 tol=2.92
2024-12-08 06:32:58,510 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=53.1 pTM=0.33 ipTM=0.148 tol=2.95
2024-12-08 06:33:01,676 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=52.1 pTM=0.335 ipTM=0.148 tol=2.93
2024-12-08 06:33:04,845 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=53.1 pTM=0.331 ipTM=0.159 tol=4.03
2024-12-08 06:33:08,010 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=51.2 pTM=0.335 ipTM=0.142 tol=4.9
2024-12-08 06:33:11,177 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=51.9 pTM=0.335 ipTM=0.139 tol=2.89
2024-12-08 06:33:14,343 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=52.3 pTM=0.339 ipTM=0.157 tol=2.28
2024-12-08 06:33:17,512 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=54 pTM=0.333 ipTM=0.157 tol=3.04
2024-12-08 06:33:20,679 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=52.4 pTM=0.338 ipTM=0.156 tol=2.41
2024-12-08 06:33:23,846 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=53.1 pTM=0.339 ipTM=0.145 tol=2.59
2024-12-08 06:33:27,015 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=52.4 pTM=0.337 ipTM=0.158 tol=3.61
2024-12-08 06:33:30,184 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=53.1 pTM=0.341 ipTM=0.158 tol=3.54
2024-12-08 06:33:33,353 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=52.5 pTM=0.336 ipTM=0.161 tol=2.62
2024-12-08 06:33:36,520 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=52.4 pTM=0.336 ipTM=0.157 tol=2.2
2024-12-08 06:33:39,689 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=51.9 pTM=0.33 ipTM=0.147 tol=1.77
2024-12-08 06:33:42,859 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=51.7 pTM=0.339 ipTM=0.153 tol=2.52
2024-12-08 06:33:46,027 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=52 pTM=0.339 ipTM=0.172 tol=3.38
2024-12-08 06:33:49,193 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=51.8 pTM=0.343 ipTM=0.145 tol=2.86
2024-12-08 06:33:52,360 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=51.7 pTM=0.342 ipTM=0.159 tol=2.59
2024-12-08 06:33:55,528 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=52.5 pTM=0.341 ipTM=0.152 tol=2.69
2024-12-08 06:33:58,695 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=51.9 pTM=0.337 ipTM=0.154 tol=2.84
2024-12-08 06:34:01,862 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=52.4 pTM=0.339 ipTM=0.146 tol=2.5
2024-12-08 06:34:05,032 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=53 pTM=0.339 ipTM=0.159 tol=2.27
2024-12-08 06:34:08,200 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=53.1 pTM=0.341 ipTM=0.148 tol=2.81
2024-12-08 06:34:11,372 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=52.8 pTM=0.339 ipTM=0.164 tol=2.33
2024-12-08 06:34:14,540 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=51.8 pTM=0.339 ipTM=0.143 tol=3.4
2024-12-08 06:34:17,709 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=52.7 pTM=0.334 ipTM=0.164 tol=3.45
2024-12-08 06:34:17,709 alphafold2_multimer_v3_model_4_seed_000 took 98.2s (30 recycles)
2024-12-08 06:34:20,990 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=49 pTM=0.32 ipTM=0.13
2024-12-08 06:34:24,170 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=52.1 pTM=0.332 ipTM=0.137 tol=17.5
2024-12-08 06:34:27,343 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=50.6 pTM=0.339 ipTM=0.149 tol=10.6
2024-12-08 06:34:30,519 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=52.4 pTM=0.335 ipTM=0.134 tol=6.94
2024-12-08 06:34:33,692 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=54.7 pTM=0.332 ipTM=0.156 tol=6.18
2024-12-08 06:34:36,861 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=53.4 pTM=0.328 ipTM=0.142 tol=3.99
2024-12-08 06:34:40,034 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=53.2 pTM=0.332 ipTM=0.154 tol=2.94
2024-12-08 06:34:43,205 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=51.9 pTM=0.322 ipTM=0.137 tol=3.06
2024-12-08 06:34:46,380 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=50.8 pTM=0.332 ipTM=0.144 tol=6.25
2024-12-08 06:34:49,551 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=51.1 pTM=0.323 ipTM=0.134 tol=6.43
2024-12-08 06:34:52,729 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=50.1 pTM=0.327 ipTM=0.141 tol=7.82
2024-12-08 06:34:55,908 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=50 pTM=0.322 ipTM=0.117 tol=4.19
2024-12-08 06:34:59,081 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=50.5 pTM=0.34 ipTM=0.145 tol=3.99
2024-12-08 06:35:02,258 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=50.9 pTM=0.337 ipTM=0.143 tol=8.64
2024-12-08 06:35:05,430 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=51.8 pTM=0.362 ipTM=0.188 tol=5.98
2024-12-08 06:35:08,604 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=51.1 pTM=0.344 ipTM=0.153 tol=4.19
2024-12-08 06:35:11,781 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=51.1 pTM=0.345 ipTM=0.152 tol=3.24
2024-12-08 06:35:14,951 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=52.2 pTM=0.354 ipTM=0.199 tol=3.42
2024-12-08 06:35:18,123 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=53 pTM=0.358 ipTM=0.208 tol=2.73
2024-12-08 06:35:21,293 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=52.8 pTM=0.357 ipTM=0.213 tol=2.38
2024-12-08 06:35:24,465 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=52.6 pTM=0.362 ipTM=0.185 tol=1.76
2024-12-08 06:35:27,635 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=52.1 pTM=0.355 ipTM=0.19 tol=1.43
2024-12-08 06:35:30,807 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=51.5 pTM=0.355 ipTM=0.169 tol=1.86
2024-12-08 06:35:33,979 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=50.9 pTM=0.345 ipTM=0.148 tol=2.18
2024-12-08 06:35:37,155 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=50.5 pTM=0.35 ipTM=0.149 tol=2.42
2024-12-08 06:35:40,325 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=51.8 pTM=0.354 ipTM=0.171 tol=2.51
2024-12-08 06:35:43,499 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=51.3 pTM=0.349 ipTM=0.157 tol=2.5
2024-12-08 06:35:46,668 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=52.1 pTM=0.358 ipTM=0.173 tol=1.79
2024-12-08 06:35:49,840 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=52 pTM=0.357 ipTM=0.17 tol=1.23
2024-12-08 06:35:53,010 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=51.3 pTM=0.352 ipTM=0.181 tol=1.39
2024-12-08 06:35:56,182 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=51.2 pTM=0.354 ipTM=0.165 tol=2.91
2024-12-08 06:35:56,182 alphafold2_multimer_v3_model_5_seed_000 took 98.4s (30 recycles)
2024-12-08 06:35:56,275 reranking models by 'multimer' metric
2024-12-08 06:35:58,478 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-08 06:36:10,454 Relaxation took 14.2s
2024-12-08 06:36:10,454 rank_001_alphafold2_multimer_v3_model_2_seed_000 pLDDT=57 pTM=0.371 ipTM=0.19
2024-12-08 06:36:18,355 Relaxation took 7.9s
2024-12-08 06:36:18,355 rank_002_alphafold2_multimer_v3_model_5_seed_000 pLDDT=51.2 pTM=0.354 ipTM=0.165
2024-12-08 06:36:40,831 Relaxation took 22.5s
2024-12-08 06:36:40,832 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=51.9 pTM=0.333 ipTM=0.165
2024-12-08 06:36:53,535 Relaxation took 12.7s
2024-12-08 06:36:53,535 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=52.7 pTM=0.334 ipTM=0.164
2024-12-08 06:37:12,900 Relaxation took 19.4s
2024-12-08 06:37:12,900 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=55.6 pTM=0.337 ipTM=0.148
2024-12-08 06:37:13,757 Done