2024-12-08 06:34:28,922 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-08 06:34:29,212 Running on GPU
2024-12-08 06:34:31,598 Found 6 citations for tools or databases
2024-12-08 06:34:31,598 Query 1/1: RNF181_HMMR (length 877)
2024-12-08 06:34:31,886 Sleeping for 7s. Reason: PENDING
2024-12-08 06:34:39,144 Sleeping for 9s. Reason: RUNNING
2024-12-08 06:34:48,404 Sleeping for 5s. Reason: RUNNING
2024-12-08 06:34:53,664 Sleeping for 10s. Reason: RUNNING
2024-12-08 06:35:03,931 Sleeping for 8s. Reason: RUNNING
2024-12-08 06:35:12,196 Sleeping for 5s. Reason: RUNNING
2024-12-08 06:35:17,451 Sleeping for 6s. Reason: RUNNING
2024-12-08 06:35:23,709 Sleeping for 5s. Reason: RUNNING
2024-12-08 06:35:28,973 Sleeping for 6s. Reason: RUNNING
2024-12-08 06:35:35,236 Sleeping for 8s. Reason: RUNNING
2024-12-08 06:35:43,508 Sleeping for 10s. Reason: RUNNING
2024-12-08 06:35:54,566 Sleeping for 7s. Reason: PENDING
2024-12-08 06:36:01,824 Sleeping for 8s. Reason: PENDING
2024-12-08 06:36:10,095 Sleeping for 9s. Reason: PENDING
2024-12-08 06:36:19,355 Sleeping for 5s. Reason: PENDING
2024-12-08 06:36:24,608 Sleeping for 9s. Reason: PENDING
2024-12-08 06:36:33,867 Sleeping for 8s. Reason: RUNNING
2024-12-08 06:36:42,124 Sleeping for 8s. Reason: RUNNING
2024-12-08 06:36:50,381 Sleeping for 7s. Reason: RUNNING
2024-12-08 06:36:57,641 Sleeping for 8s. Reason: RUNNING
2024-12-08 06:37:05,898 Sleeping for 6s. Reason: RUNNING
2024-12-08 06:37:12,154 Sleeping for 10s. Reason: RUNNING
2024-12-08 06:37:24,358 Setting max_seq=508, max_extra_seq=2048
2024-12-08 06:40:27,509 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=58.1 pTM=0.211 ipTM=0.107
2024-12-08 06:40:44,865 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=61.6 pTM=0.223 ipTM=0.114 tol=93.2
2024-12-08 06:41:02,231 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=61.6 pTM=0.232 ipTM=0.129 tol=12.2
2024-12-08 06:41:19,603 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=62.1 pTM=0.231 ipTM=0.137 tol=11.3
2024-12-08 06:41:37,006 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=61.8 pTM=0.23 ipTM=0.141 tol=7.73
2024-12-08 06:41:54,437 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=61.6 pTM=0.231 ipTM=0.147 tol=4.15
2024-12-08 06:42:11,886 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=61.7 pTM=0.232 ipTM=0.154 tol=3.92
2024-12-08 06:42:29,361 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=61.6 pTM=0.231 ipTM=0.156 tol=5.31
2024-12-08 06:42:46,852 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=62.4 pTM=0.232 ipTM=0.154 tol=2.33
2024-12-08 06:43:04,357 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=62.1 pTM=0.233 ipTM=0.155 tol=1.75
2024-12-08 06:43:21,876 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=61.9 pTM=0.231 ipTM=0.157 tol=2.77
2024-12-08 06:43:39,391 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=62.8 pTM=0.231 ipTM=0.16 tol=2.23
2024-12-08 06:43:56,919 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=61.5 pTM=0.233 ipTM=0.166 tol=2.48
2024-12-08 06:44:14,461 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=62.5 pTM=0.234 ipTM=0.162 tol=2.36
2024-12-08 06:44:32,007 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=62.3 pTM=0.233 ipTM=0.164 tol=1.97
2024-12-08 06:44:49,551 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=62.1 pTM=0.23 ipTM=0.164 tol=2.35
2024-12-08 06:45:07,098 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=62.2 pTM=0.233 ipTM=0.161 tol=2.2
2024-12-08 06:45:24,640 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=62 pTM=0.234 ipTM=0.163 tol=2.19
2024-12-08 06:45:42,170 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=62.3 pTM=0.231 ipTM=0.162 tol=3.07
2024-12-08 06:45:59,719 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=62.2 pTM=0.232 ipTM=0.16 tol=3.73
2024-12-08 06:46:17,282 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=62 pTM=0.231 ipTM=0.156 tol=1.35
2024-12-08 06:46:34,843 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=61.9 pTM=0.23 ipTM=0.156 tol=1.37
2024-12-08 06:46:52,421 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=62.3 pTM=0.229 ipTM=0.156 tol=1.33
2024-12-08 06:47:09,989 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=62.2 pTM=0.23 ipTM=0.156 tol=1.55
2024-12-08 06:47:27,547 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=62.2 pTM=0.233 ipTM=0.155 tol=1.33
2024-12-08 06:47:45,106 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=62.1 pTM=0.229 ipTM=0.153 tol=3.08
2024-12-08 06:48:02,649 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=61.7 pTM=0.231 ipTM=0.156 tol=3.44
2024-12-08 06:48:20,195 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=62.6 pTM=0.229 ipTM=0.157 tol=2.04
2024-12-08 06:48:37,742 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=61.4 pTM=0.229 ipTM=0.158 tol=1.96
2024-12-08 06:48:55,289 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=62.1 pTM=0.23 ipTM=0.159 tol=1.61
2024-12-08 06:49:12,837 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=61.9 pTM=0.231 ipTM=0.157 tol=1.21
2024-12-08 06:49:12,838 alphafold2_multimer_v3_model_1_seed_000 took 704.1s (30 recycles)
2024-12-08 06:49:30,952 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=56.6 pTM=0.201 ipTM=0.102
2024-12-08 06:49:48,540 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=63.8 pTM=0.205 ipTM=0.112 tol=70
2024-12-08 06:50:06,130 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=63.7 pTM=0.212 ipTM=0.119 tol=13.9
2024-12-08 06:50:23,725 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=63.6 pTM=0.207 ipTM=0.121 tol=15.8
2024-12-08 06:50:41,319 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=63.1 pTM=0.211 ipTM=0.117 tol=15.5
2024-12-08 06:50:58,913 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=64.1 pTM=0.21 ipTM=0.115 tol=11.9
2024-12-08 06:51:16,496 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=64.2 pTM=0.214 ipTM=0.112 tol=11
2024-12-08 06:51:34,075 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=63.5 pTM=0.212 ipTM=0.113 tol=16.5
2024-12-08 06:51:51,646 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=63.9 pTM=0.212 ipTM=0.117 tol=11.8
2024-12-08 06:52:09,233 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=63.8 pTM=0.214 ipTM=0.117 tol=9.67
2024-12-08 06:52:26,810 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=63.7 pTM=0.209 ipTM=0.12 tol=12.6
2024-12-08 06:52:44,398 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=63.8 pTM=0.208 ipTM=0.114 tol=11.7
2024-12-08 06:53:01,994 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=63.5 pTM=0.209 ipTM=0.118 tol=8.29
2024-12-08 06:53:19,581 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=64.7 pTM=0.21 ipTM=0.117 tol=6.28
2024-12-08 06:53:37,160 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=64.1 pTM=0.209 ipTM=0.118 tol=4.13
2024-12-08 06:53:54,739 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=65.1 pTM=0.207 ipTM=0.112 tol=3.81
2024-12-08 06:54:12,322 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=64.8 pTM=0.208 ipTM=0.116 tol=6.26
2024-12-08 06:54:29,893 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=64.6 pTM=0.209 ipTM=0.113 tol=3.89
2024-12-08 06:54:47,465 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=64.8 pTM=0.208 ipTM=0.112 tol=4
2024-12-08 06:55:05,013 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=64.6 pTM=0.206 ipTM=0.114 tol=2.81
2024-12-08 06:55:22,576 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=64.2 pTM=0.205 ipTM=0.112 tol=3.29
2024-12-08 06:55:40,125 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=64.5 pTM=0.206 ipTM=0.113 tol=3.55
2024-12-08 06:55:57,705 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=65 pTM=0.204 ipTM=0.112 tol=2.93
2024-12-08 06:56:15,268 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=65 pTM=0.205 ipTM=0.113 tol=2.09
2024-12-08 06:56:32,853 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=64.6 pTM=0.205 ipTM=0.114 tol=4.84
2024-12-08 06:56:50,425 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=64.1 pTM=0.204 ipTM=0.113 tol=3.29
2024-12-08 06:57:07,999 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=64.5 pTM=0.206 ipTM=0.112 tol=2.32
2024-12-08 06:57:25,575 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=64.7 pTM=0.205 ipTM=0.112 tol=3.2
2024-12-08 06:57:43,142 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=64.6 pTM=0.204 ipTM=0.113 tol=2.08
2024-12-08 06:58:00,690 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=65.2 pTM=0.207 ipTM=0.113 tol=3.11
2024-12-08 06:58:18,208 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=65.8 pTM=0.236 ipTM=0.114 tol=6.47
2024-12-08 06:58:18,209 alphafold2_multimer_v3_model_2_seed_000 took 544.9s (30 recycles)
2024-12-08 06:58:36,416 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=54.5 pTM=0.189 ipTM=0.0977
2024-12-08 06:58:54,050 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=57 pTM=0.202 ipTM=0.114 tol=70.4
2024-12-08 06:59:11,694 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=57.5 pTM=0.202 ipTM=0.117 tol=14.4
2024-12-08 06:59:29,324 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=58.2 pTM=0.21 ipTM=0.109 tol=11.3
2024-12-08 06:59:46,948 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=57 pTM=0.225 ipTM=0.107 tol=6.73
2024-12-08 07:00:04,559 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=58.9 pTM=0.241 ipTM=0.112 tol=16.1
2024-12-08 07:00:22,124 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=57 pTM=0.239 ipTM=0.13 tol=29.7
2024-12-08 07:00:39,702 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=57.8 pTM=0.228 ipTM=0.135 tol=6.98
2024-12-08 07:00:57,300 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=57.6 pTM=0.212 ipTM=0.132 tol=6.62
2024-12-08 07:01:14,864 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=57.4 pTM=0.231 ipTM=0.133 tol=6.32
2024-12-08 07:01:32,443 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=58.6 pTM=0.225 ipTM=0.134 tol=5.57
2024-12-08 07:01:50,004 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=57.5 pTM=0.228 ipTM=0.129 tol=6.21
2024-12-08 07:02:07,547 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=56.3 pTM=0.233 ipTM=0.132 tol=6.89
2024-12-08 07:02:25,114 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=56.6 pTM=0.229 ipTM=0.128 tol=8.72
2024-12-08 07:02:42,678 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=57 pTM=0.239 ipTM=0.134 tol=3.17
2024-12-08 07:03:00,221 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=58.4 pTM=0.268 ipTM=0.14 tol=6.56
2024-12-08 07:03:17,748 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=57 pTM=0.256 ipTM=0.142 tol=3.9
2024-12-08 07:03:35,256 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=55.9 pTM=0.265 ipTM=0.145 tol=10.1
2024-12-08 07:03:52,749 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=56.2 pTM=0.247 ipTM=0.138 tol=7.62
2024-12-08 07:04:10,230 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=55.7 pTM=0.256 ipTM=0.143 tol=7.72
2024-12-08 07:04:27,711 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=57.3 pTM=0.257 ipTM=0.136 tol=11.3
2024-12-08 07:04:45,187 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=56.7 pTM=0.263 ipTM=0.145 tol=5.69
2024-12-08 07:05:02,698 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=56 pTM=0.26 ipTM=0.134 tol=9.81
2024-12-08 07:05:20,194 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=55.7 pTM=0.258 ipTM=0.141 tol=8.48
2024-12-08 07:05:37,673 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=55.9 pTM=0.258 ipTM=0.131 tol=10.1
2024-12-08 07:05:55,148 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=57.6 pTM=0.273 ipTM=0.135 tol=10.9
2024-12-08 07:06:12,611 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=56.9 pTM=0.266 ipTM=0.136 tol=13.6
2024-12-08 07:06:30,103 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=56.5 pTM=0.265 ipTM=0.141 tol=11
2024-12-08 07:06:47,551 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=57.3 pTM=0.27 ipTM=0.141 tol=10.5
2024-12-08 07:07:05,022 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=55.8 pTM=0.257 ipTM=0.141 tol=8.83
2024-12-08 07:07:22,466 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=57.3 pTM=0.271 ipTM=0.142 tol=8.97
2024-12-08 07:07:22,467 alphafold2_multimer_v3_model_3_seed_000 took 543.8s (30 recycles)
2024-12-08 07:07:40,606 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=50.6 pTM=0.197 ipTM=0.105
2024-12-08 07:07:58,247 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=52.9 pTM=0.208 ipTM=0.115 tol=35.9
2024-12-08 07:08:15,888 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=55.2 pTM=0.21 ipTM=0.124 tol=27.5
2024-12-08 07:08:33,532 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=55.9 pTM=0.209 ipTM=0.125 tol=22.3
2024-12-08 07:08:51,159 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=56.7 pTM=0.212 ipTM=0.128 tol=17.9
2024-12-08 07:09:08,801 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=56.2 pTM=0.209 ipTM=0.129 tol=10
2024-12-08 07:09:26,436 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=56.9 pTM=0.209 ipTM=0.139 tol=7.23
2024-12-08 07:09:44,041 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=56.4 pTM=0.209 ipTM=0.128 tol=29.9
2024-12-08 07:10:01,673 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=57 pTM=0.208 ipTM=0.126 tol=23.9
2024-12-08 07:10:19,296 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=57.9 pTM=0.211 ipTM=0.133 tol=13.2
2024-12-08 07:10:36,944 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=57.6 pTM=0.208 ipTM=0.132 tol=10.2
2024-12-08 07:10:54,579 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=57.2 pTM=0.209 ipTM=0.133 tol=14.5
2024-12-08 07:11:12,209 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=57.6 pTM=0.21 ipTM=0.144 tol=8.91
2024-12-08 07:11:29,832 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=57.9 pTM=0.21 ipTM=0.137 tol=6.16
2024-12-08 07:11:47,465 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=57.9 pTM=0.208 ipTM=0.141 tol=10.3
2024-12-08 07:12:05,091 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=58.1 pTM=0.209 ipTM=0.142 tol=8.97
2024-12-08 07:12:22,708 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=57.8 pTM=0.208 ipTM=0.141 tol=15.9
2024-12-08 07:12:40,328 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=58.1 pTM=0.213 ipTM=0.15 tol=15.1
2024-12-08 07:12:57,959 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=58 pTM=0.21 ipTM=0.144 tol=9.55
2024-12-08 07:13:15,612 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=58.3 pTM=0.21 ipTM=0.147 tol=7.47
2024-12-08 07:13:33,222 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=58.4 pTM=0.211 ipTM=0.146 tol=12.4
2024-12-08 07:13:50,849 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=57.7 pTM=0.211 ipTM=0.15 tol=10.7
2024-12-08 07:14:08,482 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=58.1 pTM=0.208 ipTM=0.149 tol=3.84
2024-12-08 07:14:26,078 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=57.9 pTM=0.212 ipTM=0.151 tol=8.69
2024-12-08 07:14:43,704 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=58.6 pTM=0.213 ipTM=0.149 tol=11.8
2024-12-08 07:15:01,316 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=58.1 pTM=0.211 ipTM=0.145 tol=12.2
2024-12-08 07:15:18,927 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=57.8 pTM=0.213 ipTM=0.147 tol=16.2
2024-12-08 07:15:36,585 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=58.2 pTM=0.211 ipTM=0.145 tol=14.8
2024-12-08 07:15:54,203 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=57.2 pTM=0.211 ipTM=0.148 tol=12.9
2024-12-08 07:16:11,810 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=57.5 pTM=0.208 ipTM=0.142 tol=10.3
2024-12-08 07:16:29,415 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=58 pTM=0.21 ipTM=0.141 tol=14.6
2024-12-08 07:16:29,416 alphafold2_multimer_v3_model_4_seed_000 took 546.5s (30 recycles)
2024-12-08 07:16:47,639 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=58.1 pTM=0.2 ipTM=0.0989
2024-12-08 07:17:05,260 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=57.6 pTM=0.228 ipTM=0.116 tol=37.5
2024-12-08 07:17:22,843 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=59.2 pTM=0.23 ipTM=0.121 tol=22.8
2024-12-08 07:17:40,438 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=61.2 pTM=0.228 ipTM=0.127 tol=8.68
2024-12-08 07:17:57,957 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=62.1 pTM=0.24 ipTM=0.132 tol=17.2
2024-12-08 07:18:15,452 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=62.1 pTM=0.242 ipTM=0.134 tol=10.2
2024-12-08 07:18:32,933 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=61.5 pTM=0.239 ipTM=0.134 tol=4.05
2024-12-08 07:18:50,465 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=61.5 pTM=0.238 ipTM=0.136 tol=2.82
2024-12-08 07:19:07,972 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=61.4 pTM=0.235 ipTM=0.14 tol=3.5
2024-12-08 07:19:25,495 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=61.6 pTM=0.238 ipTM=0.139 tol=2.52
2024-12-08 07:19:43,010 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=61.8 pTM=0.237 ipTM=0.145 tol=3.51
2024-12-08 07:20:00,511 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=62.4 pTM=0.243 ipTM=0.146 tol=3.63
2024-12-08 07:20:18,018 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=62.1 pTM=0.244 ipTM=0.154 tol=3.27
2024-12-08 07:20:35,531 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=61.8 pTM=0.241 ipTM=0.155 tol=3.29
2024-12-08 07:20:53,044 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=62.5 pTM=0.247 ipTM=0.151 tol=2.99
2024-12-08 07:21:10,552 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=62.1 pTM=0.245 ipTM=0.153 tol=2.37
2024-12-08 07:21:28,081 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=62.2 pTM=0.24 ipTM=0.152 tol=2.27
2024-12-08 07:21:45,591 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=61.7 pTM=0.242 ipTM=0.156 tol=2.96
2024-12-08 07:22:03,121 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=61.5 pTM=0.237 ipTM=0.155 tol=1.87
2024-12-08 07:22:20,653 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=61.5 pTM=0.237 ipTM=0.155 tol=1.81
2024-12-08 07:22:38,168 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=61.7 pTM=0.237 ipTM=0.154 tol=1.71
2024-12-08 07:22:55,706 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=61.5 pTM=0.236 ipTM=0.156 tol=1.87
2024-12-08 07:23:13,247 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=61.8 pTM=0.237 ipTM=0.153 tol=2.52
2024-12-08 07:23:30,767 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=61.9 pTM=0.239 ipTM=0.155 tol=2.02
2024-12-08 07:23:48,274 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=62.8 pTM=0.252 ipTM=0.146 tol=3.8
2024-12-08 07:24:05,825 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=62.2 pTM=0.245 ipTM=0.146 tol=2.66
2024-12-08 07:24:23,361 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=61.9 pTM=0.241 ipTM=0.147 tol=3.28
2024-12-08 07:24:40,863 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=62.4 pTM=0.248 ipTM=0.149 tol=2.34
2024-12-08 07:24:58,394 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=61.8 pTM=0.245 ipTM=0.153 tol=2.23
2024-12-08 07:25:15,944 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=61.9 pTM=0.243 ipTM=0.153 tol=2.98
2024-12-08 07:25:33,467 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=62.2 pTM=0.245 ipTM=0.151 tol=2.59
2024-12-08 07:25:33,468 alphafold2_multimer_v3_model_5_seed_000 took 543.6s (30 recycles)
2024-12-08 07:25:33,950 reranking models by 'multimer' metric
2024-12-08 07:25:35,218 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-08 07:26:33,984 Relaxation took 60.0s
2024-12-08 07:26:33,984 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=61.9 pTM=0.231 ipTM=0.157
2024-12-08 07:27:16,536 Relaxation took 42.5s
2024-12-08 07:27:16,536 rank_002_alphafold2_multimer_v3_model_5_seed_000 pLDDT=62.2 pTM=0.245 ipTM=0.151
2024-12-08 07:28:10,019 Relaxation took 53.5s
2024-12-08 07:28:10,019 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=57.3 pTM=0.271 ipTM=0.142
2024-12-08 07:29:39,924 Relaxation took 89.9s
2024-12-08 07:29:39,925 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=58 pTM=0.21 ipTM=0.141
2024-12-08 07:30:31,740 Relaxation took 51.8s
2024-12-08 07:30:31,740 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=65.8 pTM=0.236 ipTM=0.114
2024-12-08 07:30:33,338 Done