2024-12-08 07:06:39,260 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3) 2024-12-08 07:06:39,549 Running on GPU 2024-12-08 07:06:41,667 Found 6 citations for tools or databases 2024-12-08 07:06:41,667 Query 1/1: RNF181_TRPV3 (length 943) 2024-12-08 07:06:41,962 Sleeping for 5s. Reason: PENDING 2024-12-08 07:06:47,215 Sleeping for 7s. Reason: PENDING 2024-12-08 07:06:54,476 Sleeping for 8s. Reason: PENDING 2024-12-08 07:07:02,728 Sleeping for 9s. Reason: PENDING 2024-12-08 07:07:11,983 Sleeping for 6s. Reason: PENDING 2024-12-08 07:07:18,235 Sleeping for 5s. Reason: PENDING 2024-12-08 07:07:23,495 Sleeping for 6s. Reason: PENDING 2024-12-08 07:07:29,752 Sleeping for 9s. Reason: PENDING 2024-12-08 07:07:39,011 Sleeping for 8s. Reason: RUNNING 2024-12-08 07:07:47,260 Sleeping for 8s. Reason: RUNNING 2024-12-08 07:07:55,521 Sleeping for 9s. Reason: RUNNING 2024-12-08 07:08:04,780 Sleeping for 6s. Reason: RUNNING 2024-12-08 07:08:11,038 Sleeping for 9s. Reason: RUNNING 2024-12-08 07:08:20,304 Sleeping for 6s. Reason: RUNNING 2024-12-08 07:08:26,562 Sleeping for 9s. Reason: RUNNING 2024-12-08 07:08:35,831 Sleeping for 8s. Reason: RUNNING 2024-12-08 07:08:44,099 Sleeping for 7s. Reason: RUNNING 2024-12-08 07:08:51,358 Sleeping for 9s. Reason: RUNNING 2024-12-08 07:09:00,626 Sleeping for 6s. Reason: RUNNING 2024-12-08 07:09:06,894 Sleeping for 9s. Reason: RUNNING 2024-12-08 07:09:16,157 Sleeping for 10s. Reason: RUNNING 2024-12-08 07:09:26,415 Sleeping for 8s. Reason: RUNNING 2024-12-08 07:09:34,678 Sleeping for 10s. Reason: RUNNING 2024-12-08 07:09:44,938 Sleeping for 6s. Reason: RUNNING 2024-12-08 07:09:51,201 Sleeping for 9s. Reason: RUNNING 2024-12-08 07:10:00,461 Sleeping for 10s. Reason: RUNNING 2024-12-08 07:10:10,719 Sleeping for 9s. Reason: RUNNING 2024-12-08 07:10:19,977 Sleeping for 6s. Reason: RUNNING 2024-12-08 07:10:27,948 Sleeping for 6s. Reason: PENDING 2024-12-08 07:10:34,210 Sleeping for 7s. Reason: RUNNING 2024-12-08 07:10:41,470 Sleeping for 10s. Reason: RUNNING 2024-12-08 07:10:51,727 Sleeping for 6s. Reason: RUNNING 2024-12-08 07:10:57,991 Sleeping for 5s. Reason: RUNNING 2024-12-08 07:11:03,246 Sleeping for 8s. Reason: RUNNING 2024-12-08 07:11:11,502 Sleeping for 5s. Reason: RUNNING 2024-12-08 07:11:16,756 Sleeping for 6s. Reason: RUNNING 2024-12-08 07:11:23,010 Sleeping for 5s. Reason: RUNNING 2024-12-08 07:11:28,271 Sleeping for 7s. Reason: RUNNING 2024-12-08 07:11:35,529 Sleeping for 9s. Reason: RUNNING 2024-12-08 07:11:44,792 Sleeping for 10s. Reason: RUNNING 2024-12-08 07:11:55,051 Sleeping for 5s. Reason: RUNNING 2024-12-08 07:12:00,303 Sleeping for 8s. Reason: RUNNING 2024-12-08 07:12:10,939 Setting max_seq=508, max_extra_seq=2048 2024-12-08 07:15:04,329 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=67.6 pTM=0.601 ipTM=0.146 2024-12-08 07:15:22,882 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=69.3 pTM=0.614 ipTM=0.15 tol=4.37 2024-12-08 07:15:41,514 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=69.9 pTM=0.613 ipTM=0.146 tol=4.45 2024-12-08 07:16:00,208 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=70.2 pTM=0.613 ipTM=0.147 tol=4.54 2024-12-08 07:16:18,967 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=70.5 pTM=0.617 ipTM=0.147 tol=1.97 2024-12-08 07:16:37,767 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=70.3 pTM=0.615 ipTM=0.147 tol=0.941 2024-12-08 07:16:56,606 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=70.6 pTM=0.615 ipTM=0.15 tol=4.27 2024-12-08 07:17:15,477 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=70.4 pTM=0.614 ipTM=0.147 tol=1.63 2024-12-08 07:17:34,379 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=70.3 pTM=0.612 ipTM=0.148 tol=2.1 2024-12-08 07:17:53,307 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=70.6 pTM=0.615 ipTM=0.146 tol=5.82 2024-12-08 07:18:12,246 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=70.6 pTM=0.615 ipTM=0.147 tol=1.36 2024-12-08 07:18:31,197 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=70.3 pTM=0.614 ipTM=0.149 tol=3.03 2024-12-08 07:18:50,163 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=70.4 pTM=0.613 ipTM=0.145 tol=4.2 2024-12-08 07:19:09,128 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=70.1 pTM=0.608 ipTM=0.144 tol=1.35 2024-12-08 07:19:28,111 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=70.4 pTM=0.614 ipTM=0.148 tol=2.3 2024-12-08 07:19:47,102 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=70.6 pTM=0.612 ipTM=0.147 tol=1.45 2024-12-08 07:20:06,085 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=70.4 pTM=0.614 ipTM=0.151 tol=3.45 2024-12-08 07:20:25,041 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=70.1 pTM=0.61 ipTM=0.149 tol=3.69 2024-12-08 07:20:43,997 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=70.2 pTM=0.611 ipTM=0.146 tol=2.92 2024-12-08 07:21:02,944 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=70.4 pTM=0.614 ipTM=0.148 tol=2.83 2024-12-08 07:21:21,897 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=70.6 pTM=0.615 ipTM=0.146 tol=4.02 2024-12-08 07:21:40,845 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=70.5 pTM=0.614 ipTM=0.146 tol=4.2 2024-12-08 07:21:59,779 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=70.6 pTM=0.614 ipTM=0.145 tol=3.26 2024-12-08 07:22:18,714 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=70.6 pTM=0.614 ipTM=0.149 tol=3.12 2024-12-08 07:22:37,660 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=70.4 pTM=0.615 ipTM=0.145 tol=1.83 2024-12-08 07:22:56,599 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=70.4 pTM=0.614 ipTM=0.148 tol=1.5 2024-12-08 07:23:15,545 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=70.7 pTM=0.617 ipTM=0.151 tol=3.13 2024-12-08 07:23:34,463 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=70.4 pTM=0.615 ipTM=0.153 tol=1.83 2024-12-08 07:23:53,388 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=70.4 pTM=0.613 ipTM=0.147 tol=2.3 2024-12-08 07:24:12,316 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=70.4 pTM=0.615 ipTM=0.152 tol=4.77 2024-12-08 07:24:31,248 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=70.4 pTM=0.615 ipTM=0.151 tol=1.83 2024-12-08 07:24:31,248 alphafold2_multimer_v3_model_1_seed_000 took 735.2s (30 recycles) 2024-12-08 07:24:50,725 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=68 pTM=0.616 ipTM=0.281 2024-12-08 07:25:09,691 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=69 pTM=0.615 ipTM=0.22 tol=4.75 2024-12-08 07:25:28,695 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=69.6 pTM=0.612 ipTM=0.156 tol=3.99 2024-12-08 07:25:47,700 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=70.1 pTM=0.612 ipTM=0.156 tol=4.16 2024-12-08 07:26:06,703 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=70.3 pTM=0.614 ipTM=0.156 tol=2.46 2024-12-08 07:26:25,727 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=70.2 pTM=0.612 ipTM=0.152 tol=2.53 2024-12-08 07:26:44,753 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=70.5 pTM=0.613 ipTM=0.15 tol=2.59 2024-12-08 07:27:03,800 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=70.5 pTM=0.614 ipTM=0.151 tol=2.61 2024-12-08 07:27:22,850 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=70.7 pTM=0.615 ipTM=0.15 tol=2.23 2024-12-08 07:27:41,896 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=70.8 pTM=0.615 ipTM=0.152 tol=2.14 2024-12-08 07:28:00,938 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=70.9 pTM=0.618 ipTM=0.157 tol=2.11 2024-12-08 07:28:19,969 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=70.7 pTM=0.616 ipTM=0.156 tol=1.71 2024-12-08 07:28:39,001 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=70.7 pTM=0.616 ipTM=0.151 tol=1.09 2024-12-08 07:28:58,033 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=70.4 pTM=0.612 ipTM=0.148 tol=0.779 2024-12-08 07:29:17,075 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=70.3 pTM=0.61 ipTM=0.149 tol=1.53 2024-12-08 07:29:36,131 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=70.6 pTM=0.613 ipTM=0.154 tol=1.64 2024-12-08 07:29:55,194 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=70.4 pTM=0.613 ipTM=0.159 tol=2.38 2024-12-08 07:30:14,243 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=70.2 pTM=0.61 ipTM=0.157 tol=1.31 2024-12-08 07:30:33,299 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=70.1 pTM=0.61 ipTM=0.156 tol=1.57 2024-12-08 07:30:52,360 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=70.2 pTM=0.612 ipTM=0.155 tol=1.86 2024-12-08 07:31:11,401 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=70.5 pTM=0.614 ipTM=0.153 tol=1.54 2024-12-08 07:31:30,432 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=70.6 pTM=0.612 ipTM=0.149 tol=1.02 2024-12-08 07:31:49,444 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=70.4 pTM=0.612 ipTM=0.153 tol=2.77 2024-12-08 07:32:08,449 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=70.5 pTM=0.613 ipTM=0.156 tol=2.09 2024-12-08 07:32:27,471 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=70.4 pTM=0.612 ipTM=0.153 tol=0.651 2024-12-08 07:32:46,489 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=70.4 pTM=0.611 ipTM=0.15 tol=0.653 2024-12-08 07:33:05,487 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=70.4 pTM=0.612 ipTM=0.152 tol=0.496 2024-12-08 07:33:05,488 alphafold2_multimer_v3_model_2_seed_000 took 513.7s (26 recycles) 2024-12-08 07:33:24,983 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=66.6 pTM=0.586 ipTM=0.164 2024-12-08 07:33:43,945 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=67.7 pTM=0.603 ipTM=0.16 tol=6.91 2024-12-08 07:34:02,911 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=68.4 pTM=0.607 ipTM=0.177 tol=3.12 2024-12-08 07:34:21,905 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=68.2 pTM=0.603 ipTM=0.176 tol=3.14 2024-12-08 07:34:40,909 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=68.2 pTM=0.605 ipTM=0.173 tol=3.78 2024-12-08 07:34:59,924 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=68 pTM=0.604 ipTM=0.169 tol=2.68 2024-12-08 07:35:18,938 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=68 pTM=0.603 ipTM=0.171 tol=1.43 2024-12-08 07:35:37,946 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=67.9 pTM=0.603 ipTM=0.171 tol=1.64 2024-12-08 07:35:56,949 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=67.6 pTM=0.603 ipTM=0.172 tol=4.12 2024-12-08 07:36:15,952 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=67.9 pTM=0.603 ipTM=0.172 tol=4.09 2024-12-08 07:36:34,974 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=68.1 pTM=0.606 ipTM=0.175 tol=2.84 2024-12-08 07:36:53,996 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=68 pTM=0.603 ipTM=0.173 tol=1.92 2024-12-08 07:37:13,031 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=67.9 pTM=0.601 ipTM=0.166 tol=1.62 2024-12-08 07:37:32,057 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=67.8 pTM=0.601 ipTM=0.169 tol=1.66 2024-12-08 07:37:51,086 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=67.9 pTM=0.601 ipTM=0.17 tol=1.68 2024-12-08 07:38:10,124 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=67.8 pTM=0.602 ipTM=0.175 tol=1.44 2024-12-08 07:38:29,176 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=68.3 pTM=0.61 ipTM=0.175 tol=1.38 2024-12-08 07:38:48,216 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=67.9 pTM=0.604 ipTM=0.176 tol=2.15 2024-12-08 07:39:07,244 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=67.9 pTM=0.605 ipTM=0.178 tol=2.85 2024-12-08 07:39:26,278 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=68.1 pTM=0.608 ipTM=0.178 tol=2.97 2024-12-08 07:39:45,320 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=67.9 pTM=0.606 ipTM=0.178 tol=1.54 2024-12-08 07:40:04,361 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=67.9 pTM=0.605 ipTM=0.176 tol=1.6 2024-12-08 07:40:23,396 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=68 pTM=0.608 ipTM=0.178 tol=2.05 2024-12-08 07:40:42,425 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=67.6 pTM=0.607 ipTM=0.178 tol=5.37 2024-12-08 07:41:01,430 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=67.9 pTM=0.607 ipTM=0.181 tol=3.16 2024-12-08 07:41:20,442 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=67.9 pTM=0.605 ipTM=0.18 tol=2.61 2024-12-08 07:41:39,456 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=67.9 pTM=0.605 ipTM=0.179 tol=1.36 2024-12-08 07:41:58,463 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=67.9 pTM=0.608 ipTM=0.178 tol=1.31 2024-12-08 07:42:17,459 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=68.1 pTM=0.608 ipTM=0.179 tol=1.23 2024-12-08 07:42:36,460 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=67.8 pTM=0.606 ipTM=0.185 tol=1.09 2024-12-08 07:42:55,437 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=67.9 pTM=0.606 ipTM=0.181 tol=2.72 2024-12-08 07:42:55,438 alphafold2_multimer_v3_model_3_seed_000 took 589.4s (30 recycles) 2024-12-08 07:43:14,872 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=64.2 pTM=0.615 ipTM=0.469 2024-12-08 07:43:33,810 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=66.4 pTM=0.6 ipTM=0.201 tol=6.15 2024-12-08 07:43:52,783 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=67.9 pTM=0.593 ipTM=0.135 tol=12.6 2024-12-08 07:44:11,759 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=67.9 pTM=0.591 ipTM=0.144 tol=4.68 2024-12-08 07:44:30,762 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=67.9 pTM=0.591 ipTM=0.141 tol=4.04 2024-12-08 07:44:49,770 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=68 pTM=0.594 ipTM=0.144 tol=3.82 2024-12-08 07:45:08,776 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=68.1 pTM=0.593 ipTM=0.142 tol=4.12 2024-12-08 07:45:27,774 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=67.9 pTM=0.591 ipTM=0.14 tol=1.96 2024-12-08 07:45:46,764 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=68 pTM=0.593 ipTM=0.138 tol=1.53 2024-12-08 07:46:05,746 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=68.4 pTM=0.597 ipTM=0.137 tol=1.32 2024-12-08 07:46:24,722 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=68.5 pTM=0.598 ipTM=0.141 tol=1.83 2024-12-08 07:46:43,700 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=68.1 pTM=0.595 ipTM=0.142 tol=1.31 2024-12-08 07:47:02,654 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=68.1 pTM=0.593 ipTM=0.136 tol=1.84 2024-12-08 07:47:21,614 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=68.1 pTM=0.593 ipTM=0.138 tol=1.45 2024-12-08 07:47:40,565 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=67.9 pTM=0.593 ipTM=0.141 tol=1.04 2024-12-08 07:47:59,514 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=68.1 pTM=0.594 ipTM=0.142 tol=0.85 2024-12-08 07:48:18,450 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=68.4 pTM=0.599 ipTM=0.139 tol=1.92 2024-12-08 07:48:37,398 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=68.1 pTM=0.594 ipTM=0.14 tol=1.1 2024-12-08 07:48:56,346 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=68 pTM=0.595 ipTM=0.139 tol=1.12 2024-12-08 07:49:15,279 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=68.1 pTM=0.596 ipTM=0.14 tol=1.62 2024-12-08 07:49:34,204 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=67.8 pTM=0.592 ipTM=0.14 tol=2.66 2024-12-08 07:49:53,134 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=67.5 pTM=0.592 ipTM=0.137 tol=2.01 2024-12-08 07:50:12,067 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=67.5 pTM=0.592 ipTM=0.138 tol=3.1 2024-12-08 07:50:30,994 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=67.8 pTM=0.59 ipTM=0.138 tol=2.02 2024-12-08 07:50:49,924 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=67.6 pTM=0.591 ipTM=0.14 tol=1.58 2024-12-08 07:51:08,849 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=67.4 pTM=0.59 ipTM=0.135 tol=2.66 2024-12-08 07:51:27,774 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=67.2 pTM=0.59 ipTM=0.136 tol=3.3 2024-12-08 07:51:46,690 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=67.4 pTM=0.59 ipTM=0.135 tol=1.76 2024-12-08 07:52:05,614 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=67.6 pTM=0.591 ipTM=0.136 tol=2.55 2024-12-08 07:52:24,537 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=67.6 pTM=0.592 ipTM=0.139 tol=1.74 2024-12-08 07:52:43,481 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=68 pTM=0.596 ipTM=0.138 tol=7.07 2024-12-08 07:52:43,482 alphafold2_multimer_v3_model_4_seed_000 took 587.5s (30 recycles) 2024-12-08 07:53:02,909 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=64.6 pTM=0.578 ipTM=0.169 2024-12-08 07:53:21,813 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=66.3 pTM=0.594 ipTM=0.158 tol=4.68 2024-12-08 07:53:40,748 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=67.1 pTM=0.599 ipTM=0.148 tol=3.8 2024-12-08 07:53:59,678 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=67.6 pTM=0.603 ipTM=0.155 tol=5.69 2024-12-08 07:54:18,618 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=68 pTM=0.607 ipTM=0.165 tol=2.82 2024-12-08 07:54:37,550 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=68.2 pTM=0.609 ipTM=0.165 tol=5.85 2024-12-08 07:54:56,492 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=68.4 pTM=0.61 ipTM=0.164 tol=2.73 2024-12-08 07:55:15,445 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=68.3 pTM=0.608 ipTM=0.163 tol=3.15 2024-12-08 07:55:34,383 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=68.4 pTM=0.607 ipTM=0.163 tol=3.12 2024-12-08 07:55:53,320 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=68.6 pTM=0.613 ipTM=0.166 tol=2.15 2024-12-08 07:56:12,263 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=68.6 pTM=0.612 ipTM=0.168 tol=1.82 2024-12-08 07:56:31,191 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=68.4 pTM=0.611 ipTM=0.167 tol=1.21 2024-12-08 07:56:50,105 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=68.4 pTM=0.61 ipTM=0.164 tol=1.61 2024-12-08 07:57:09,037 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=68.2 pTM=0.609 ipTM=0.167 tol=3.38 2024-12-08 07:57:27,976 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=68.2 pTM=0.608 ipTM=0.166 tol=1.09 2024-12-08 07:57:46,938 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=68.4 pTM=0.609 ipTM=0.167 tol=2.19 2024-12-08 07:58:05,896 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=68.6 pTM=0.615 ipTM=0.165 tol=1.21 2024-12-08 07:58:24,828 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=68.4 pTM=0.61 ipTM=0.169 tol=1.27 2024-12-08 07:58:43,798 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=68.2 pTM=0.61 ipTM=0.167 tol=1.04 2024-12-08 07:59:02,783 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=68.3 pTM=0.613 ipTM=0.161 tol=1.2 2024-12-08 07:59:21,750 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=68.2 pTM=0.609 ipTM=0.162 tol=1.58 2024-12-08 07:59:40,713 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=68.1 pTM=0.608 ipTM=0.162 tol=1.87 2024-12-08 07:59:59,671 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=68.2 pTM=0.609 ipTM=0.162 tol=1.19 2024-12-08 08:00:18,622 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=68.4 pTM=0.611 ipTM=0.165 tol=0.617 2024-12-08 08:00:37,587 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=68.3 pTM=0.612 ipTM=0.167 tol=3.67 2024-12-08 08:00:56,545 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=68.1 pTM=0.61 ipTM=0.169 tol=0.997 2024-12-08 08:01:15,477 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=68.2 pTM=0.609 ipTM=0.163 tol=1.31 2024-12-08 08:01:34,415 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=68.1 pTM=0.609 ipTM=0.165 tol=2.79 2024-12-08 08:01:53,344 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=68.2 pTM=0.608 ipTM=0.167 tol=2.64 2024-12-08 08:02:12,266 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=68.1 pTM=0.609 ipTM=0.172 tol=2.17 2024-12-08 08:02:31,191 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=68.4 pTM=0.61 ipTM=0.169 tol=1.13 2024-12-08 08:02:31,191 alphafold2_multimer_v3_model_5_seed_000 took 587.2s (30 recycles) 2024-12-08 08:02:31,743 reranking models by 'multimer' metric 2024-12-08 08:02:32,775 Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead. 2024-12-08 08:03:34,879 Relaxation took 63.1s 2024-12-08 08:03:34,880 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=67.9 pTM=0.606 ipTM=0.181 2024-12-08 08:04:36,913 Relaxation took 62.0s 2024-12-08 08:04:36,914 rank_002_alphafold2_multimer_v3_model_5_seed_000 pLDDT=68.4 pTM=0.61 ipTM=0.169 2024-12-08 08:05:22,321 Relaxation took 45.4s 2024-12-08 08:05:22,321 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=70.4 pTM=0.612 ipTM=0.152 2024-12-08 08:06:35,567 Relaxation took 73.2s 2024-12-08 08:06:35,567 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=70.4 pTM=0.615 ipTM=0.151 2024-12-08 08:07:36,891 Relaxation took 61.3s 2024-12-08 08:07:36,892 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=68 pTM=0.596 ipTM=0.138 2024-12-08 08:07:38,918 Done