2024-12-08 07:10:46,286 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-08 07:10:46,591 Running on GPU
2024-12-08 07:10:48,816 Found 6 citations for tools or databases
2024-12-08 07:10:48,816 Query 1/1: RNF187_ZNF653 (length 850)
2024-12-08 07:10:49,084 Sleeping for 8s. Reason: PENDING
2024-12-08 07:10:57,341 Sleeping for 5s. Reason: RUNNING
2024-12-08 07:11:02,602 Sleeping for 8s. Reason: RUNNING
2024-12-08 07:11:10,862 Sleeping for 7s. Reason: RUNNING
2024-12-08 07:11:18,119 Sleeping for 8s. Reason: RUNNING
2024-12-08 07:11:26,384 Sleeping for 9s. Reason: RUNNING
2024-12-08 07:11:35,644 Sleeping for 5s. Reason: RUNNING
2024-12-08 07:11:40,900 Sleeping for 6s. Reason: RUNNING
2024-12-08 07:11:47,153 Sleeping for 5s. Reason: RUNNING
2024-12-08 07:11:52,407 Sleeping for 8s. Reason: RUNNING
2024-12-08 07:12:00,664 Sleeping for 5s. Reason: RUNNING
2024-12-08 07:12:05,920 Sleeping for 10s. Reason: RUNNING
2024-12-08 07:12:16,183 Sleeping for 7s. Reason: RUNNING
2024-12-08 07:12:23,439 Sleeping for 7s. Reason: RUNNING
2024-12-08 07:12:30,690 Sleeping for 10s. Reason: RUNNING
2024-12-08 07:12:40,953 Sleeping for 6s. Reason: RUNNING
2024-12-08 07:12:47,209 Sleeping for 10s. Reason: RUNNING
2024-12-08 07:12:57,472 Sleeping for 10s. Reason: RUNNING
2024-12-08 07:13:07,734 Sleeping for 10s. Reason: RUNNING
2024-12-08 07:13:17,991 Sleeping for 7s. Reason: RUNNING
2024-12-08 07:13:25,249 Sleeping for 9s. Reason: RUNNING
2024-12-08 07:13:34,512 Sleeping for 8s. Reason: RUNNING
2024-12-08 07:13:42,768 Sleeping for 10s. Reason: RUNNING
2024-12-08 07:13:53,029 Sleeping for 8s. Reason: RUNNING
2024-12-08 07:14:02,821 Sleeping for 10s. Reason: PENDING
2024-12-08 07:14:13,079 Sleeping for 10s. Reason: RUNNING
2024-12-08 07:14:23,335 Sleeping for 8s. Reason: RUNNING
2024-12-08 07:14:31,600 Sleeping for 8s. Reason: RUNNING
2024-12-08 07:14:39,865 Sleeping for 10s. Reason: RUNNING
2024-12-08 07:14:50,132 Sleeping for 6s. Reason: RUNNING
2024-12-08 07:14:56,398 Sleeping for 9s. Reason: RUNNING
2024-12-08 07:15:05,661 Sleeping for 8s. Reason: RUNNING
2024-12-08 07:15:13,924 Sleeping for 9s. Reason: RUNNING
2024-12-08 07:15:23,192 Sleeping for 10s. Reason: RUNNING
2024-12-08 07:15:35,934 Setting max_seq=508, max_extra_seq=2048
2024-12-08 07:18:15,010 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=33.4 pTM=0.21 ipTM=0.181
2024-12-08 07:18:31,311 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=32.6 pTM=0.217 ipTM=0.21 tol=13.8
2024-12-08 07:18:47,658 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=31.6 pTM=0.209 ipTM=0.2 tol=10.8
2024-12-08 07:19:04,040 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=31.2 pTM=0.21 ipTM=0.211 tol=8.3
2024-12-08 07:19:20,465 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=31.4 pTM=0.206 ipTM=0.212 tol=7.8
2024-12-08 07:19:36,927 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=32.1 pTM=0.214 ipTM=0.24 tol=7.99
2024-12-08 07:19:53,396 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=34.2 pTM=0.246 ipTM=0.33 tol=5.25
2024-12-08 07:20:09,883 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=36.2 pTM=0.259 ipTM=0.345 tol=8.21
2024-12-08 07:20:26,393 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=36.2 pTM=0.26 ipTM=0.339 tol=7.08
2024-12-08 07:20:42,890 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=35.7 pTM=0.264 ipTM=0.343 tol=7.43
2024-12-08 07:20:59,388 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=35.9 pTM=0.28 ipTM=0.353 tol=6.66
2024-12-08 07:21:15,885 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=36.6 pTM=0.283 ipTM=0.345 tol=5.13
2024-12-08 07:21:32,392 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=35.8 pTM=0.281 ipTM=0.345 tol=4.7
2024-12-08 07:21:48,896 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=36.2 pTM=0.286 ipTM=0.349 tol=6.07
2024-12-08 07:22:05,391 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=36.8 pTM=0.292 ipTM=0.35 tol=4.47
2024-12-08 07:22:21,892 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=36.5 pTM=0.29 ipTM=0.345 tol=5.35
2024-12-08 07:22:38,399 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=35.8 pTM=0.291 ipTM=0.342 tol=7.39
2024-12-08 07:22:54,913 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=36.2 pTM=0.294 ipTM=0.353 tol=4.19
2024-12-08 07:23:11,421 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=36.5 pTM=0.295 ipTM=0.347 tol=3.22
2024-12-08 07:23:27,918 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=36.8 pTM=0.301 ipTM=0.357 tol=3.79
2024-12-08 07:23:44,417 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=36.7 pTM=0.294 ipTM=0.34 tol=2.63
2024-12-08 07:24:00,905 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=36.1 pTM=0.294 ipTM=0.347 tol=2.75
2024-12-08 07:24:17,410 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=36.2 pTM=0.293 ipTM=0.345 tol=6.27
2024-12-08 07:24:33,908 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=36.4 pTM=0.297 ipTM=0.353 tol=5.1
2024-12-08 07:24:50,421 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=36.3 pTM=0.299 ipTM=0.346 tol=3.82
2024-12-08 07:25:06,935 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=36.4 pTM=0.298 ipTM=0.353 tol=3.41
2024-12-08 07:25:23,438 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=35.7 pTM=0.295 ipTM=0.35 tol=3.93
2024-12-08 07:25:39,945 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=36 pTM=0.296 ipTM=0.355 tol=4.8
2024-12-08 07:25:56,450 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=35.2 pTM=0.301 ipTM=0.363 tol=8.65
2024-12-08 07:26:12,959 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=36.3 pTM=0.294 ipTM=0.354 tol=8.6
2024-12-08 07:26:29,470 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=36.4 pTM=0.297 ipTM=0.356 tol=2.58
2024-12-08 07:26:29,470 alphafold2_multimer_v3_model_1_seed_000 took 649.9s (30 recycles)
2024-12-08 07:26:46,397 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=34.7 pTM=0.222 ipTM=0.182
2024-12-08 07:27:02,931 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=35.9 pTM=0.241 ipTM=0.239 tol=11.8
2024-12-08 07:27:19,490 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=38.2 pTM=0.269 ipTM=0.327 tol=15.1
2024-12-08 07:27:36,074 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=40 pTM=0.283 ipTM=0.335 tol=10.7
2024-12-08 07:27:52,636 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=39.5 pTM=0.288 ipTM=0.336 tol=8.02
2024-12-08 07:28:09,180 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=40.1 pTM=0.305 ipTM=0.338 tol=6.67
2024-12-08 07:28:25,716 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=40.2 pTM=0.305 ipTM=0.34 tol=5.26
2024-12-08 07:28:42,249 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=39.7 pTM=0.303 ipTM=0.338 tol=6.26
2024-12-08 07:28:58,783 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=40 pTM=0.303 ipTM=0.336 tol=2.93
2024-12-08 07:29:15,329 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=40.1 pTM=0.302 ipTM=0.338 tol=3.47
2024-12-08 07:29:31,886 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=39.8 pTM=0.299 ipTM=0.338 tol=3.22
2024-12-08 07:29:48,444 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=40.1 pTM=0.3 ipTM=0.337 tol=5.3
2024-12-08 07:30:04,997 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=39.9 pTM=0.302 ipTM=0.339 tol=3.06
2024-12-08 07:30:21,542 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=40.3 pTM=0.307 ipTM=0.338 tol=4.77
2024-12-08 07:30:38,075 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=40.5 pTM=0.311 ipTM=0.343 tol=4.77
2024-12-08 07:30:54,628 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=40.5 pTM=0.308 ipTM=0.339 tol=3.21
2024-12-08 07:31:11,192 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=40.7 pTM=0.308 ipTM=0.344 tol=3.14
2024-12-08 07:31:27,735 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=40.5 pTM=0.308 ipTM=0.345 tol=2.82
2024-12-08 07:31:44,281 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=41.3 pTM=0.314 ipTM=0.355 tol=3.16
2024-12-08 07:32:00,810 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=41.6 pTM=0.325 ipTM=0.383 tol=6.93
2024-12-08 07:32:17,347 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=41.2 pTM=0.308 ipTM=0.345 tol=4.89
2024-12-08 07:32:33,875 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=41.5 pTM=0.321 ipTM=0.385 tol=9.45
2024-12-08 07:32:50,404 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=40.8 pTM=0.309 ipTM=0.352 tol=9.02
2024-12-08 07:33:06,951 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=41.5 pTM=0.316 ipTM=0.37 tol=7.44
2024-12-08 07:33:23,489 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=41.3 pTM=0.307 ipTM=0.345 tol=11.2
2024-12-08 07:33:40,029 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=41.8 pTM=0.32 ipTM=0.381 tol=4.96
2024-12-08 07:33:56,561 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=41.2 pTM=0.308 ipTM=0.346 tol=6.41
2024-12-08 07:34:13,106 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=41.7 pTM=0.322 ipTM=0.389 tol=11
2024-12-08 07:34:29,648 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=41.2 pTM=0.31 ipTM=0.35 tol=4.81
2024-12-08 07:34:46,189 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=41.8 pTM=0.32 ipTM=0.385 tol=5.32
2024-12-08 07:35:02,741 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=41 pTM=0.306 ipTM=0.347 tol=6.89
2024-12-08 07:35:02,742 alphafold2_multimer_v3_model_2_seed_000 took 512.8s (30 recycles)
2024-12-08 07:35:19,807 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=35.1 pTM=0.207 ipTM=0.164
2024-12-08 07:35:36,459 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=34.4 pTM=0.224 ipTM=0.188 tol=18
2024-12-08 07:35:53,124 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=34.8 pTM=0.231 ipTM=0.218 tol=13.7
2024-12-08 07:36:09,802 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=34.5 pTM=0.222 ipTM=0.187 tol=9.48
2024-12-08 07:36:26,477 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=34.5 pTM=0.223 ipTM=0.191 tol=6.75
2024-12-08 07:36:43,126 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=34.6 pTM=0.229 ipTM=0.213 tol=11
2024-12-08 07:36:59,778 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=34.7 pTM=0.227 ipTM=0.207 tol=8.83
2024-12-08 07:37:16,432 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=33.8 pTM=0.22 ipTM=0.192 tol=6.29
2024-12-08 07:37:33,094 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=34.5 pTM=0.224 ipTM=0.203 tol=4.88
2024-12-08 07:37:49,745 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=34.6 pTM=0.226 ipTM=0.205 tol=6.29
2024-12-08 07:38:06,416 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=34.4 pTM=0.224 ipTM=0.194 tol=3.67
2024-12-08 07:38:23,083 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=34.3 pTM=0.219 ipTM=0.19 tol=2.89
2024-12-08 07:38:39,739 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=34.2 pTM=0.223 ipTM=0.186 tol=5.95
2024-12-08 07:38:56,402 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=34.4 pTM=0.222 ipTM=0.182 tol=4.91
2024-12-08 07:39:13,055 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=34.4 pTM=0.221 ipTM=0.189 tol=6.17
2024-12-08 07:39:29,704 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=34.6 pTM=0.225 ipTM=0.192 tol=6.79
2024-12-08 07:39:46,371 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=34.2 pTM=0.224 ipTM=0.188 tol=7.22
2024-12-08 07:40:03,037 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=34.6 pTM=0.22 ipTM=0.181 tol=4.15
2024-12-08 07:40:19,714 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=34.4 pTM=0.222 ipTM=0.19 tol=5.75
2024-12-08 07:40:36,376 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=35.1 pTM=0.23 ipTM=0.204 tol=5.26
2024-12-08 07:40:53,037 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=34.5 pTM=0.224 ipTM=0.185 tol=5.24
2024-12-08 07:41:09,695 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=34.3 pTM=0.223 ipTM=0.194 tol=2.48
2024-12-08 07:41:26,347 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=34.6 pTM=0.221 ipTM=0.186 tol=5.07
2024-12-08 07:41:42,998 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=34.5 pTM=0.223 ipTM=0.192 tol=4.36
2024-12-08 07:41:59,655 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=34.6 pTM=0.223 ipTM=0.195 tol=6.54
2024-12-08 07:42:16,289 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=34.6 pTM=0.228 ipTM=0.203 tol=6.73
2024-12-08 07:42:32,915 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=33.9 pTM=0.223 ipTM=0.193 tol=5.64
2024-12-08 07:42:49,546 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=34.4 pTM=0.218 ipTM=0.183 tol=4.7
2024-12-08 07:43:06,164 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=34.7 pTM=0.228 ipTM=0.206 tol=3.14
2024-12-08 07:43:22,806 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=34.6 pTM=0.226 ipTM=0.206 tol=8.55
2024-12-08 07:43:39,441 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=34.3 pTM=0.223 ipTM=0.193 tol=3.75
2024-12-08 07:43:39,441 alphafold2_multimer_v3_model_3_seed_000 took 516.2s (30 recycles)
2024-12-08 07:43:56,449 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=34.3 pTM=0.208 ipTM=0.173
2024-12-08 07:44:13,037 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=34.7 pTM=0.214 ipTM=0.18 tol=19.8
2024-12-08 07:44:29,667 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=34.5 pTM=0.205 ipTM=0.175 tol=12.7
2024-12-08 07:44:46,290 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=35 pTM=0.223 ipTM=0.177 tol=10.9
2024-12-08 07:45:02,879 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=34.1 pTM=0.219 ipTM=0.184 tol=9.13
2024-12-08 07:45:19,496 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=33.7 pTM=0.228 ipTM=0.182 tol=8.85
2024-12-08 07:45:36,086 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=34 pTM=0.242 ipTM=0.189 tol=8.23
2024-12-08 07:45:52,658 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=34.2 pTM=0.243 ipTM=0.197 tol=13.4
2024-12-08 07:46:09,245 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=34.4 pTM=0.238 ipTM=0.194 tol=8.51
2024-12-08 07:46:25,831 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=34.7 pTM=0.244 ipTM=0.195 tol=5.74
2024-12-08 07:46:42,409 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=34.5 pTM=0.238 ipTM=0.194 tol=6.34
2024-12-08 07:46:58,985 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=35.1 pTM=0.246 ipTM=0.195 tol=5.3
2024-12-08 07:47:15,555 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=34.7 pTM=0.242 ipTM=0.187 tol=5.31
2024-12-08 07:47:32,120 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=35 pTM=0.248 ipTM=0.195 tol=4.32
2024-12-08 07:47:48,685 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=34.7 pTM=0.244 ipTM=0.193 tol=6.27
2024-12-08 07:48:05,229 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=35.2 pTM=0.243 ipTM=0.193 tol=4.46
2024-12-08 07:48:21,776 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=34.4 pTM=0.248 ipTM=0.195 tol=5.08
2024-12-08 07:48:38,337 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=35.2 pTM=0.247 ipTM=0.195 tol=3.64
2024-12-08 07:48:54,888 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=35.2 pTM=0.25 ipTM=0.199 tol=5.13
2024-12-08 07:49:11,439 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=35.3 pTM=0.247 ipTM=0.196 tol=3.85
2024-12-08 07:49:27,990 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=35.4 pTM=0.247 ipTM=0.195 tol=3.49
2024-12-08 07:49:44,522 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=35.6 pTM=0.249 ipTM=0.2 tol=2.83
2024-12-08 07:50:01,063 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=35.5 pTM=0.247 ipTM=0.196 tol=3.23
2024-12-08 07:50:17,604 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=35.5 pTM=0.25 ipTM=0.198 tol=2.8
2024-12-08 07:50:34,154 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=36.1 pTM=0.25 ipTM=0.205 tol=3.02
2024-12-08 07:50:50,694 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=35.6 pTM=0.251 ipTM=0.209 tol=4.3
2024-12-08 07:51:07,225 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=35.8 pTM=0.249 ipTM=0.206 tol=3.41
2024-12-08 07:51:23,751 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=35.5 pTM=0.246 ipTM=0.2 tol=5.48
2024-12-08 07:51:40,269 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=35.5 pTM=0.25 ipTM=0.198 tol=9.55
2024-12-08 07:51:56,767 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=35.1 pTM=0.251 ipTM=0.216 tol=4.18
2024-12-08 07:52:13,286 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=36.2 pTM=0.257 ipTM=0.219 tol=5.36
2024-12-08 07:52:13,287 alphafold2_multimer_v3_model_4_seed_000 took 513.4s (30 recycles)
2024-12-08 07:52:30,320 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=32.3 pTM=0.217 ipTM=0.158
2024-12-08 07:52:46,932 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=31.9 pTM=0.207 ipTM=0.181 tol=14.4
2024-12-08 07:53:03,558 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=33.2 pTM=0.242 ipTM=0.211 tol=18.5
2024-12-08 07:53:20,168 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=33.4 pTM=0.237 ipTM=0.216 tol=9.62
2024-12-08 07:53:36,794 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=33.3 pTM=0.226 ipTM=0.227 tol=6.84
2024-12-08 07:53:53,420 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=34.7 pTM=0.245 ipTM=0.299 tol=7.71
2024-12-08 07:54:10,043 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=36.1 pTM=0.263 ipTM=0.32 tol=11.9
2024-12-08 07:54:26,662 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=36.7 pTM=0.27 ipTM=0.323 tol=6.72
2024-12-08 07:54:43,281 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=37 pTM=0.271 ipTM=0.32 tol=7.04
2024-12-08 07:54:59,890 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=37 pTM=0.271 ipTM=0.315 tol=4.12
2024-12-08 07:55:16,509 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=36.9 pTM=0.276 ipTM=0.328 tol=6.33
2024-12-08 07:55:33,119 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=37.9 pTM=0.283 ipTM=0.333 tol=6.43
2024-12-08 07:55:49,725 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=37.7 pTM=0.287 ipTM=0.336 tol=8.38
2024-12-08 07:56:06,336 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=37.8 pTM=0.292 ipTM=0.345 tol=6
2024-12-08 07:56:22,940 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=38.3 pTM=0.294 ipTM=0.347 tol=6.16
2024-12-08 07:56:39,539 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=37.9 pTM=0.294 ipTM=0.343 tol=6.05
2024-12-08 07:56:56,134 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=37.8 pTM=0.295 ipTM=0.343 tol=12.9
2024-12-08 07:57:12,749 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=38.3 pTM=0.299 ipTM=0.358 tol=6.93
2024-12-08 07:57:29,365 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=38 pTM=0.293 ipTM=0.339 tol=9
2024-12-08 07:57:45,972 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=38.3 pTM=0.301 ipTM=0.359 tol=10.8
2024-12-08 07:58:02,586 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=38.1 pTM=0.294 ipTM=0.342 tol=8.18
2024-12-08 07:58:19,178 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=38.2 pTM=0.305 ipTM=0.367 tol=9.1
2024-12-08 07:58:35,774 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=38.2 pTM=0.298 ipTM=0.353 tol=8.63
2024-12-08 07:58:52,373 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=38.3 pTM=0.308 ipTM=0.374 tol=8.8
2024-12-08 07:59:08,977 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=38.6 pTM=0.302 ipTM=0.354 tol=5.38
2024-12-08 07:59:25,574 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=38.6 pTM=0.307 ipTM=0.362 tol=4.14
2024-12-08 07:59:42,148 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=36.3 pTM=0.298 ipTM=0.349 tol=18.3
2024-12-08 07:59:58,747 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=37.7 pTM=0.3 ipTM=0.351 tol=14.9
2024-12-08 08:00:15,358 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=37.9 pTM=0.303 ipTM=0.359 tol=11.3
2024-12-08 08:00:31,948 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=37.9 pTM=0.299 ipTM=0.355 tol=5.39
2024-12-08 08:00:48,534 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=38.3 pTM=0.303 ipTM=0.357 tol=5.17
2024-12-08 08:00:48,535 alphafold2_multimer_v3_model_5_seed_000 took 514.8s (30 recycles)
2024-12-08 08:00:48,994 reranking models by 'multimer' metric
2024-12-08 08:00:51,664 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-08 08:02:05,109 Relaxation took 76.1s
2024-12-08 08:02:05,110 rank_001_alphafold2_multimer_v3_model_5_seed_000 pLDDT=38.3 pTM=0.303 ipTM=0.357
2024-12-08 08:03:10,489 Relaxation took 65.4s
2024-12-08 08:03:10,490 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=36.4 pTM=0.297 ipTM=0.356
2024-12-08 08:04:36,682 Relaxation took 86.2s
2024-12-08 08:04:36,683 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=41 pTM=0.306 ipTM=0.347
2024-12-08 08:05:50,477 Relaxation took 73.8s
2024-12-08 08:05:50,477 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=36.2 pTM=0.257 ipTM=0.219
2024-12-08 08:07:08,920 Relaxation took 78.4s
2024-12-08 08:07:08,920 rank_005_alphafold2_multimer_v3_model_3_seed_000 pLDDT=34.3 pTM=0.223 ipTM=0.193
2024-12-08 08:07:10,380 Done