2024-12-08 07:14:33,143 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-08 07:14:33,445 Running on GPU
2024-12-08 07:14:35,494 Found 6 citations for tools or databases
2024-12-08 07:14:35,494 Query 1/1: RNF19B_FBL (length 1053)
2024-12-08 07:14:35,776 Sleeping for 7s. Reason: PENDING
2024-12-08 07:14:43,043 Sleeping for 5s. Reason: RUNNING
2024-12-08 07:14:48,300 Sleeping for 9s. Reason: RUNNING
2024-12-08 07:14:57,556 Sleeping for 8s. Reason: RUNNING
2024-12-08 07:15:05,818 Sleeping for 5s. Reason: RUNNING
2024-12-08 07:15:11,074 Sleeping for 9s. Reason: RUNNING
2024-12-08 07:15:20,344 Sleeping for 8s. Reason: RUNNING
2024-12-08 07:15:28,608 Sleeping for 6s. Reason: RUNNING
2024-12-08 07:15:34,859 Sleeping for 5s. Reason: RUNNING
2024-12-08 07:15:40,109 Sleeping for 6s. Reason: RUNNING
2024-12-08 07:15:46,364 Sleeping for 7s. Reason: RUNNING
2024-12-08 07:15:53,625 Sleeping for 7s. Reason: RUNNING
2024-12-08 07:16:00,892 Sleeping for 7s. Reason: RUNNING
2024-12-08 07:16:08,149 Sleeping for 10s. Reason: RUNNING
2024-12-08 07:16:18,408 Sleeping for 7s. Reason: RUNNING
2024-12-08 07:16:25,675 Sleeping for 9s. Reason: RUNNING
2024-12-08 07:16:34,938 Sleeping for 6s. Reason: RUNNING
2024-12-08 07:16:41,197 Sleeping for 10s. Reason: RUNNING
2024-12-08 07:16:51,460 Sleeping for 6s. Reason: RUNNING
2024-12-08 07:16:57,724 Sleeping for 5s. Reason: RUNNING
2024-12-08 07:17:04,689 Sleeping for 10s. Reason: PENDING
2024-12-08 07:17:14,955 Sleeping for 10s. Reason: RUNNING
2024-12-08 07:17:25,214 Sleeping for 6s. Reason: RUNNING
2024-12-08 07:17:31,475 Sleeping for 7s. Reason: RUNNING
2024-12-08 07:17:38,740 Sleeping for 7s. Reason: RUNNING
2024-12-08 07:17:45,995 Sleeping for 8s. Reason: RUNNING
2024-12-08 07:17:54,252 Sleeping for 9s. Reason: RUNNING
2024-12-08 07:18:03,509 Sleeping for 7s. Reason: RUNNING
2024-12-08 07:18:10,767 Sleeping for 6s. Reason: RUNNING
2024-12-08 07:18:17,026 Sleeping for 10s. Reason: RUNNING
2024-12-08 07:18:27,287 Sleeping for 9s. Reason: RUNNING
2024-12-08 07:18:36,555 Sleeping for 10s. Reason: RUNNING
2024-12-08 07:18:50,514 Setting max_seq=508, max_extra_seq=2048
2024-12-08 07:22:03,450 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=48.5 pTM=0.365 ipTM=0.344
2024-12-08 07:22:27,428 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=50.2 pTM=0.326 ipTM=0.215 tol=13.5
2024-12-08 07:22:51,512 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=50.1 pTM=0.326 ipTM=0.189 tol=6.67
2024-12-08 07:23:15,631 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=50.8 pTM=0.325 ipTM=0.189 tol=7.09
2024-12-08 07:23:39,816 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=51.1 pTM=0.32 ipTM=0.179 tol=7.75
2024-12-08 07:24:04,029 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=51.1 pTM=0.32 ipTM=0.179 tol=5.53
2024-12-08 07:24:28,241 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=51.1 pTM=0.32 ipTM=0.178 tol=3.92
2024-12-08 07:24:52,499 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=51.4 pTM=0.32 ipTM=0.173 tol=5.34
2024-12-08 07:25:16,762 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=50.9 pTM=0.319 ipTM=0.168 tol=9.2
2024-12-08 07:25:41,026 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=51.1 pTM=0.321 ipTM=0.173 tol=3.77
2024-12-08 07:26:05,280 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=51.4 pTM=0.323 ipTM=0.179 tol=2.25
2024-12-08 07:26:29,544 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=51.8 pTM=0.325 ipTM=0.188 tol=2.02
2024-12-08 07:26:53,800 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=51.2 pTM=0.323 ipTM=0.188 tol=2.37
2024-12-08 07:27:18,066 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=51.7 pTM=0.325 ipTM=0.192 tol=2.09
2024-12-08 07:27:42,333 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=51.5 pTM=0.324 ipTM=0.192 tol=2.18
2024-12-08 07:28:06,610 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=52 pTM=0.323 ipTM=0.192 tol=3.74
2024-12-08 07:28:30,884 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=51.6 pTM=0.323 ipTM=0.193 tol=3.7
2024-12-08 07:28:55,161 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=51.7 pTM=0.323 ipTM=0.188 tol=3.52
2024-12-08 07:29:19,437 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=51.7 pTM=0.323 ipTM=0.189 tol=2.91
2024-12-08 07:29:43,704 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=51.7 pTM=0.324 ipTM=0.19 tol=4.36
2024-12-08 07:30:07,972 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=51.4 pTM=0.323 ipTM=0.188 tol=3.52
2024-12-08 07:30:32,254 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=51.7 pTM=0.323 ipTM=0.191 tol=3.91
2024-12-08 07:30:56,532 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=51.4 pTM=0.323 ipTM=0.196 tol=3.7
2024-12-08 07:31:20,814 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=51.4 pTM=0.322 ipTM=0.189 tol=4.31
2024-12-08 07:31:45,098 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=51.2 pTM=0.322 ipTM=0.19 tol=3.36
2024-12-08 07:32:09,392 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=51.5 pTM=0.322 ipTM=0.183 tol=2.74
2024-12-08 07:32:33,705 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=51.2 pTM=0.322 ipTM=0.191 tol=3.07
2024-12-08 07:32:58,011 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=51.5 pTM=0.321 ipTM=0.184 tol=3.32
2024-12-08 07:33:22,317 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=51.2 pTM=0.321 ipTM=0.191 tol=2.17
2024-12-08 07:33:46,610 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=51.4 pTM=0.322 ipTM=0.196 tol=2.7
2024-12-08 07:34:10,901 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=51.3 pTM=0.32 ipTM=0.19 tol=2.94
2024-12-08 07:34:10,902 alphafold2_multimer_v3_model_1_seed_000 took 915.8s (30 recycles)
2024-12-08 07:34:35,780 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=48.8 pTM=0.33 ipTM=0.238
2024-12-08 07:35:00,026 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=51 pTM=0.317 ipTM=0.187 tol=12
2024-12-08 07:35:24,317 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=51.5 pTM=0.318 ipTM=0.199 tol=8.77
2024-12-08 07:35:48,601 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=51.9 pTM=0.321 ipTM=0.203 tol=9.02
2024-12-08 07:36:12,872 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=52.2 pTM=0.333 ipTM=0.239 tol=7.64
2024-12-08 07:36:37,153 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=51.8 pTM=0.33 ipTM=0.227 tol=8.05
2024-12-08 07:37:01,453 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=52 pTM=0.329 ipTM=0.233 tol=6.2
2024-12-08 07:37:25,753 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=52.1 pTM=0.328 ipTM=0.224 tol=6.55
2024-12-08 07:37:50,057 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=51.9 pTM=0.326 ipTM=0.214 tol=4.88
2024-12-08 07:38:14,360 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=52 pTM=0.328 ipTM=0.221 tol=5.16
2024-12-08 07:38:38,668 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=52.1 pTM=0.325 ipTM=0.212 tol=4.49
2024-12-08 07:39:02,957 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=52.3 pTM=0.336 ipTM=0.252 tol=6
2024-12-08 07:39:27,254 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=52.2 pTM=0.337 ipTM=0.253 tol=3.21
2024-12-08 07:39:51,551 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=52.2 pTM=0.336 ipTM=0.248 tol=2.72
2024-12-08 07:40:15,830 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=52.3 pTM=0.339 ipTM=0.259 tol=3.22
2024-12-08 07:40:40,099 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=52.2 pTM=0.333 ipTM=0.234 tol=4.76
2024-12-08 07:41:04,381 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=51.9 pTM=0.33 ipTM=0.231 tol=3.8
2024-12-08 07:41:28,652 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=52 pTM=0.329 ipTM=0.225 tol=3.07
2024-12-08 07:41:52,915 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=52.1 pTM=0.329 ipTM=0.228 tol=3.89
2024-12-08 07:42:17,182 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=52.2 pTM=0.338 ipTM=0.255 tol=3.44
2024-12-08 07:42:41,470 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=52.1 pTM=0.333 ipTM=0.234 tol=3.9
2024-12-08 07:43:05,779 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=52.4 pTM=0.34 ipTM=0.261 tol=3.48
2024-12-08 07:43:30,067 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=52.6 pTM=0.357 ipTM=0.319 tol=5.29
2024-12-08 07:43:54,338 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=53 pTM=0.377 ipTM=0.367 tol=2.85
2024-12-08 07:44:18,613 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=52.8 pTM=0.364 ipTM=0.335 tol=4.35
2024-12-08 07:44:42,892 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=52.3 pTM=0.345 ipTM=0.265 tol=4.83
2024-12-08 07:45:07,180 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=52 pTM=0.338 ipTM=0.252 tol=2.69
2024-12-08 07:45:31,481 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=52.4 pTM=0.342 ipTM=0.261 tol=3.11
2024-12-08 07:45:55,785 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=52.1 pTM=0.333 ipTM=0.23 tol=4.77
2024-12-08 07:46:20,084 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=52.1 pTM=0.329 ipTM=0.232 tol=2.62
2024-12-08 07:46:44,404 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=52 pTM=0.329 ipTM=0.224 tol=3.99
2024-12-08 07:46:44,405 alphafold2_multimer_v3_model_2_seed_000 took 752.8s (30 recycles)
2024-12-08 07:47:09,488 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=49.7 pTM=0.328 ipTM=0.244
2024-12-08 07:47:33,959 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=50.1 pTM=0.312 ipTM=0.185 tol=17.3
2024-12-08 07:47:58,475 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=50.5 pTM=0.313 ipTM=0.181 tol=13.5
2024-12-08 07:48:22,985 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=50.4 pTM=0.311 ipTM=0.163 tol=9.7
2024-12-08 07:48:47,512 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=50.8 pTM=0.311 ipTM=0.144 tol=9.4
2024-12-08 07:49:12,035 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=50.2 pTM=0.309 ipTM=0.131 tol=12.8
2024-12-08 07:49:36,540 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=50.2 pTM=0.311 ipTM=0.149 tol=13.3
2024-12-08 07:50:01,050 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=50.1 pTM=0.31 ipTM=0.134 tol=13.5
2024-12-08 07:50:25,547 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=50.4 pTM=0.313 ipTM=0.154 tol=9.21
2024-12-08 07:50:50,046 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=50.2 pTM=0.314 ipTM=0.154 tol=9.68
2024-12-08 07:51:14,518 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=50.4 pTM=0.315 ipTM=0.159 tol=7.84
2024-12-08 07:51:38,977 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=50.5 pTM=0.314 ipTM=0.152 tol=5.48
2024-12-08 07:52:03,448 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=50.4 pTM=0.313 ipTM=0.141 tol=8.46
2024-12-08 07:52:27,900 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=50.5 pTM=0.315 ipTM=0.158 tol=8.87
2024-12-08 07:52:52,337 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=50.4 pTM=0.316 ipTM=0.151 tol=8.18
2024-12-08 07:53:16,776 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=50.6 pTM=0.315 ipTM=0.164 tol=8.65
2024-12-08 07:53:41,257 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=50.3 pTM=0.31 ipTM=0.16 tol=16.5
2024-12-08 07:54:05,739 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=50.5 pTM=0.311 ipTM=0.145 tol=19.2
2024-12-08 07:54:30,187 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=50.3 pTM=0.315 ipTM=0.142 tol=13.9
2024-12-08 07:54:54,661 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=50.4 pTM=0.314 ipTM=0.153 tol=8.83
2024-12-08 07:55:19,114 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=49.8 pTM=0.312 ipTM=0.155 tol=17.3
2024-12-08 07:55:43,585 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=50.4 pTM=0.311 ipTM=0.148 tol=18.7
2024-12-08 07:56:08,049 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=49.9 pTM=0.315 ipTM=0.161 tol=16.5
2024-12-08 07:56:32,529 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=50.1 pTM=0.313 ipTM=0.144 tol=12.5
2024-12-08 07:56:56,992 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=50.7 pTM=0.311 ipTM=0.151 tol=12.8
2024-12-08 07:57:21,460 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=50.7 pTM=0.312 ipTM=0.141 tol=7.84
2024-12-08 07:57:45,902 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=50.7 pTM=0.314 ipTM=0.161 tol=9.34
2024-12-08 07:58:10,366 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=50.8 pTM=0.31 ipTM=0.133 tol=9.09
2024-12-08 07:58:34,838 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=50.7 pTM=0.311 ipTM=0.148 tol=7.87
2024-12-08 07:58:59,321 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=50.9 pTM=0.311 ipTM=0.138 tol=10.5
2024-12-08 07:59:23,781 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=50.4 pTM=0.31 ipTM=0.151 tol=6.89
2024-12-08 07:59:23,782 alphafold2_multimer_v3_model_3_seed_000 took 758.7s (30 recycles)
2024-12-08 07:59:48,778 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=46.8 pTM=0.32 ipTM=0.226
2024-12-08 08:00:13,129 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=47.1 pTM=0.312 ipTM=0.198 tol=14.7
2024-12-08 08:00:37,515 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=47.6 pTM=0.308 ipTM=0.188 tol=12.5
2024-12-08 08:01:01,946 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=48.2 pTM=0.307 ipTM=0.163 tol=11.2
2024-12-08 08:01:26,377 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=48.3 pTM=0.306 ipTM=0.159 tol=8.02
2024-12-08 08:01:50,820 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=48.1 pTM=0.306 ipTM=0.158 tol=9.01
2024-12-08 08:02:15,269 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=48.4 pTM=0.307 ipTM=0.164 tol=5.18
2024-12-08 08:02:39,712 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=48.8 pTM=0.307 ipTM=0.156 tol=5.38
2024-12-08 08:03:04,147 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=48.6 pTM=0.309 ipTM=0.158 tol=9.63
2024-12-08 08:03:28,590 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=48.3 pTM=0.309 ipTM=0.14 tol=7.42
2024-12-08 08:03:53,010 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=48.6 pTM=0.308 ipTM=0.164 tol=9.01
2024-12-08 08:04:17,428 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=48.9 pTM=0.306 ipTM=0.159 tol=4.47
2024-12-08 08:04:41,855 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=48.4 pTM=0.307 ipTM=0.162 tol=2.97
2024-12-08 08:05:06,270 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=48.7 pTM=0.307 ipTM=0.164 tol=6.45
2024-12-08 08:05:30,678 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=48.6 pTM=0.308 ipTM=0.157 tol=6.63
2024-12-08 08:05:55,097 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=48.8 pTM=0.308 ipTM=0.158 tol=7.09
2024-12-08 08:06:19,528 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=48.3 pTM=0.309 ipTM=0.147 tol=9.2
2024-12-08 08:06:43,948 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=48.6 pTM=0.31 ipTM=0.145 tol=5.19
2024-12-08 08:07:08,364 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=48.6 pTM=0.309 ipTM=0.142 tol=13.6
2024-12-08 08:07:32,741 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=48.5 pTM=0.314 ipTM=0.152 tol=7.61
2024-12-08 08:07:57,148 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=47.9 pTM=0.309 ipTM=0.144 tol=14
2024-12-08 08:08:21,535 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=48.3 pTM=0.308 ipTM=0.156 tol=8.11
2024-12-08 08:08:45,923 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=48.3 pTM=0.307 ipTM=0.145 tol=5.05
2024-12-08 08:09:10,332 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=48.6 pTM=0.31 ipTM=0.142 tol=9.77
2024-12-08 08:09:34,724 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=48.7 pTM=0.315 ipTM=0.149 tol=8.98
2024-12-08 08:09:59,107 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=48.4 pTM=0.314 ipTM=0.155 tol=7.71
2024-12-08 08:10:23,502 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=48.3 pTM=0.313 ipTM=0.155 tol=4.77
2024-12-08 08:10:47,864 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=48.8 pTM=0.317 ipTM=0.178 tol=4.21
2024-12-08 08:11:12,249 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=48.4 pTM=0.314 ipTM=0.154 tol=5.73
2024-12-08 08:11:36,636 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=48.8 pTM=0.313 ipTM=0.155 tol=5.55
2024-12-08 08:12:01,043 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=48.7 pTM=0.314 ipTM=0.158 tol=6.11
2024-12-08 08:12:01,043 alphafold2_multimer_v3_model_4_seed_000 took 756.6s (30 recycles)
2024-12-08 08:12:26,145 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=47.7 pTM=0.316 ipTM=0.213
2024-12-08 08:12:50,571 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=49 pTM=0.308 ipTM=0.173 tol=12.2
2024-12-08 08:13:15,049 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=50 pTM=0.306 ipTM=0.136 tol=11.3
2024-12-08 08:13:39,499 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=50.7 pTM=0.308 ipTM=0.146 tol=8.01
2024-12-08 08:14:03,938 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=51.1 pTM=0.31 ipTM=0.146 tol=5.04
2024-12-08 08:14:28,376 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=50.8 pTM=0.309 ipTM=0.149 tol=6.78
2024-12-08 08:14:52,818 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=51.4 pTM=0.311 ipTM=0.149 tol=4.09
2024-12-08 08:15:17,256 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=51.3 pTM=0.312 ipTM=0.146 tol=6.49
2024-12-08 08:15:41,676 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=51.2 pTM=0.312 ipTM=0.151 tol=3.75
2024-12-08 08:16:06,130 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=51.4 pTM=0.312 ipTM=0.149 tol=6.62
2024-12-08 08:16:30,560 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=51.7 pTM=0.311 ipTM=0.153 tol=2.92
2024-12-08 08:16:54,975 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=51.6 pTM=0.312 ipTM=0.159 tol=3.96
2024-12-08 08:17:19,390 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=51.6 pTM=0.312 ipTM=0.154 tol=3.32
2024-12-08 08:17:43,797 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=51.8 pTM=0.312 ipTM=0.157 tol=5.48
2024-12-08 08:18:08,202 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=51.8 pTM=0.312 ipTM=0.156 tol=4.11
2024-12-08 08:18:32,617 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=51.9 pTM=0.311 ipTM=0.155 tol=2.97
2024-12-08 08:18:57,024 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=51.8 pTM=0.312 ipTM=0.156 tol=5.36
2024-12-08 08:19:21,444 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=51.7 pTM=0.312 ipTM=0.153 tol=3.96
2024-12-08 08:19:45,841 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=51.9 pTM=0.311 ipTM=0.153 tol=6.19
2024-12-08 08:20:10,240 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=51.7 pTM=0.311 ipTM=0.154 tol=5.74
2024-12-08 08:20:34,648 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=51.8 pTM=0.312 ipTM=0.156 tol=3.17
2024-12-08 08:20:59,068 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=51.8 pTM=0.311 ipTM=0.155 tol=6.29
2024-12-08 08:21:23,494 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=52 pTM=0.311 ipTM=0.156 tol=5.66
2024-12-08 08:21:47,905 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=51.9 pTM=0.312 ipTM=0.156 tol=8.7
2024-12-08 08:22:12,334 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=51.9 pTM=0.313 ipTM=0.152 tol=6.78
2024-12-08 08:22:36,725 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=51.5 pTM=0.31 ipTM=0.148 tol=4.7
2024-12-08 08:23:01,135 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=51.8 pTM=0.311 ipTM=0.152 tol=4.14
2024-12-08 08:23:25,532 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=51.8 pTM=0.31 ipTM=0.152 tol=3.66
2024-12-08 08:23:49,955 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=51.9 pTM=0.312 ipTM=0.153 tol=2.69
2024-12-08 08:24:14,343 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=52 pTM=0.313 ipTM=0.154 tol=3.47
2024-12-08 08:24:38,724 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=52 pTM=0.312 ipTM=0.154 tol=5.84
2024-12-08 08:24:38,724 alphafold2_multimer_v3_model_5_seed_000 took 757.0s (30 recycles)
2024-12-08 08:24:39,421 reranking models by 'multimer' metric
2024-12-08 08:24:42,529 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-08 08:25:56,957 Relaxation took 77.5s
2024-12-08 08:25:56,957 rank_001_alphafold2_multimer_v3_model_2_seed_000 pLDDT=52 pTM=0.329 ipTM=0.224
2024-12-08 08:26:52,079 Relaxation took 55.1s
2024-12-08 08:26:52,079 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=51.3 pTM=0.32 ipTM=0.19
2024-12-08 08:28:33,953 Relaxation took 101.9s
2024-12-08 08:28:33,954 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=48.7 pTM=0.314 ipTM=0.158
2024-12-08 08:29:55,851 Relaxation took 81.9s
2024-12-08 08:29:55,851 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=52 pTM=0.312 ipTM=0.154
2024-12-08 08:31:11,357 Relaxation took 75.5s
2024-12-08 08:31:11,357 rank_005_alphafold2_multimer_v3_model_3_seed_000 pLDDT=50.4 pTM=0.31 ipTM=0.151
2024-12-08 08:31:13,282 Done