2024-12-08 07:19:05,679 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-08 07:19:06,028 Running on GPU
2024-12-08 07:19:08,179 Found 6 citations for tools or databases
2024-12-08 07:19:08,179 Query 1/1: RNF19B_NCS1 (length 922)
2024-12-08 07:19:13,983 Setting max_seq=508, max_extra_seq=2048
2024-12-08 07:22:43,475 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=49 pTM=0.29 ipTM=0.239
2024-12-08 07:23:05,843 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=47.4 pTM=0.287 ipTM=0.162 tol=18.8
2024-12-08 07:23:28,294 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=47.2 pTM=0.292 ipTM=0.202 tol=12.5
2024-12-08 07:23:50,765 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=47.5 pTM=0.296 ipTM=0.192 tol=6.29
2024-12-08 07:24:13,297 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=47.8 pTM=0.295 ipTM=0.187 tol=5.02
2024-12-08 07:24:35,856 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=47.7 pTM=0.292 ipTM=0.185 tol=7.3
2024-12-08 07:24:58,447 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=47.8 pTM=0.294 ipTM=0.192 tol=4.95
2024-12-08 07:25:21,046 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=47.8 pTM=0.292 ipTM=0.202 tol=5.06
2024-12-08 07:25:43,669 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=47.6 pTM=0.292 ipTM=0.188 tol=3.05
2024-12-08 07:26:06,309 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=47.9 pTM=0.291 ipTM=0.198 tol=4.09
2024-12-08 07:26:28,952 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=47.9 pTM=0.295 ipTM=0.235 tol=3.88
2024-12-08 07:26:51,628 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=48.2 pTM=0.295 ipTM=0.25 tol=7.69
2024-12-08 07:27:14,296 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=48.5 pTM=0.293 ipTM=0.247 tol=7.04
2024-12-08 07:27:36,980 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=48.7 pTM=0.293 ipTM=0.238 tol=9.54
2024-12-08 07:27:59,677 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=48.8 pTM=0.291 ipTM=0.23 tol=8.8
2024-12-08 07:28:22,339 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=48.8 pTM=0.288 ipTM=0.211 tol=5.21
2024-12-08 07:28:44,981 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=48.7 pTM=0.288 ipTM=0.21 tol=3.72
2024-12-08 07:29:07,615 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=48.6 pTM=0.284 ipTM=0.186 tol=5.45
2024-12-08 07:29:30,236 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=47.8 pTM=0.29 ipTM=0.177 tol=12.9
2024-12-08 07:29:52,841 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=47.8 pTM=0.29 ipTM=0.182 tol=9.25
2024-12-08 07:30:15,433 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=47.4 pTM=0.294 ipTM=0.193 tol=6.87
2024-12-08 07:30:38,017 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=47.8 pTM=0.288 ipTM=0.183 tol=6.36
2024-12-08 07:31:00,590 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=47.8 pTM=0.291 ipTM=0.19 tol=3.58
2024-12-08 07:31:23,185 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=47.7 pTM=0.289 ipTM=0.185 tol=3.15
2024-12-08 07:31:45,767 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=48 pTM=0.29 ipTM=0.189 tol=3.49
2024-12-08 07:32:08,362 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=47.8 pTM=0.292 ipTM=0.187 tol=2.92
2024-12-08 07:32:30,939 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=48.2 pTM=0.29 ipTM=0.19 tol=3.64
2024-12-08 07:32:53,524 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=47.9 pTM=0.288 ipTM=0.181 tol=4.96
2024-12-08 07:33:16,119 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=47.7 pTM=0.288 ipTM=0.19 tol=4.34
2024-12-08 07:33:38,717 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=48.1 pTM=0.29 ipTM=0.184 tol=4.31
2024-12-08 07:34:01,338 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=47.9 pTM=0.291 ipTM=0.193 tol=4.36
2024-12-08 07:34:01,339 alphafold2_multimer_v3_model_1_seed_000 took 880.6s (30 recycles)
2024-12-08 07:34:24,575 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=50.4 pTM=0.309 ipTM=0.151
2024-12-08 07:34:47,144 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=50.5 pTM=0.295 ipTM=0.144 tol=8.43
2024-12-08 07:35:09,732 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=49.6 pTM=0.279 ipTM=0.139 tol=6.08
2024-12-08 07:35:32,325 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=49.5 pTM=0.28 ipTM=0.125 tol=5.73
2024-12-08 07:35:54,962 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=49.2 pTM=0.276 ipTM=0.124 tol=4.79
2024-12-08 07:36:17,573 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=49 pTM=0.273 ipTM=0.129 tol=7.46
2024-12-08 07:36:40,200 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=49.5 pTM=0.274 ipTM=0.13 tol=5.45
2024-12-08 07:37:02,806 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=49.4 pTM=0.276 ipTM=0.134 tol=4.25
2024-12-08 07:37:25,407 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=49 pTM=0.274 ipTM=0.136 tol=2.91
2024-12-08 07:37:47,999 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=49.3 pTM=0.276 ipTM=0.133 tol=3.19
2024-12-08 07:38:10,601 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=49 pTM=0.273 ipTM=0.129 tol=3.24
2024-12-08 07:38:33,199 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=49.2 pTM=0.272 ipTM=0.125 tol=6.52
2024-12-08 07:38:55,810 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=49.3 pTM=0.272 ipTM=0.129 tol=5.69
2024-12-08 07:39:18,421 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=49.6 pTM=0.275 ipTM=0.129 tol=4.72
2024-12-08 07:39:41,037 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=49.4 pTM=0.275 ipTM=0.129 tol=6.76
2024-12-08 07:40:03,647 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=49.5 pTM=0.275 ipTM=0.127 tol=4.34
2024-12-08 07:40:26,270 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=49.4 pTM=0.273 ipTM=0.124 tol=3.3
2024-12-08 07:40:48,885 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=49.8 pTM=0.277 ipTM=0.125 tol=2.81
2024-12-08 07:41:11,509 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=49.6 pTM=0.274 ipTM=0.126 tol=3.05
2024-12-08 07:41:34,129 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=49.4 pTM=0.274 ipTM=0.126 tol=3.93
2024-12-08 07:41:56,744 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=49.4 pTM=0.273 ipTM=0.127 tol=2.92
2024-12-08 07:42:19,383 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=49.5 pTM=0.274 ipTM=0.127 tol=2.85
2024-12-08 07:42:41,998 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=49.9 pTM=0.278 ipTM=0.128 tol=5.02
2024-12-08 07:43:04,618 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=49.9 pTM=0.28 ipTM=0.126 tol=2.96
2024-12-08 07:43:27,239 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=50.2 pTM=0.28 ipTM=0.125 tol=3.6
2024-12-08 07:43:49,850 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=49.6 pTM=0.28 ipTM=0.125 tol=3.18
2024-12-08 07:44:12,470 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=49.8 pTM=0.281 ipTM=0.126 tol=3.74
2024-12-08 07:44:35,108 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=50 pTM=0.281 ipTM=0.127 tol=7.22
2024-12-08 07:44:57,725 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=49.5 pTM=0.282 ipTM=0.125 tol=3.63
2024-12-08 07:45:20,336 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=50 pTM=0.287 ipTM=0.129 tol=3.37
2024-12-08 07:45:42,958 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=49.7 pTM=0.281 ipTM=0.127 tol=5.23
2024-12-08 07:45:42,959 alphafold2_multimer_v3_model_2_seed_000 took 700.9s (30 recycles)
2024-12-08 07:46:06,273 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=49.9 pTM=0.304 ipTM=0.215
2024-12-08 07:46:28,933 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=49.2 pTM=0.29 ipTM=0.179 tol=14
2024-12-08 07:46:51,602 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=48.5 pTM=0.286 ipTM=0.19 tol=7.18
2024-12-08 07:47:14,276 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=48.8 pTM=0.289 ipTM=0.167 tol=4.89
2024-12-08 07:47:36,938 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=48.4 pTM=0.287 ipTM=0.173 tol=7.79
2024-12-08 07:47:59,595 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=48.1 pTM=0.285 ipTM=0.17 tol=5.03
2024-12-08 07:48:22,260 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=48.1 pTM=0.285 ipTM=0.18 tol=5.96
2024-12-08 07:48:44,934 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=48 pTM=0.286 ipTM=0.176 tol=4.35
2024-12-08 07:49:07,609 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=47.7 pTM=0.284 ipTM=0.188 tol=6.16
2024-12-08 07:49:30,276 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=48.3 pTM=0.287 ipTM=0.184 tol=5.5
2024-12-08 07:49:52,940 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=48 pTM=0.283 ipTM=0.182 tol=5.71
2024-12-08 07:50:15,613 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=48.3 pTM=0.283 ipTM=0.182 tol=6.75
2024-12-08 07:50:38,270 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=48.6 pTM=0.287 ipTM=0.177 tol=6.82
2024-12-08 07:51:00,921 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=48.5 pTM=0.286 ipTM=0.183 tol=7.45
2024-12-08 07:51:23,586 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=48.3 pTM=0.283 ipTM=0.183 tol=5.87
2024-12-08 07:51:46,250 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=48.5 pTM=0.283 ipTM=0.181 tol=3.97
2024-12-08 07:52:08,917 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=48.5 pTM=0.285 ipTM=0.181 tol=3.79
2024-12-08 07:52:31,588 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=48.6 pTM=0.285 ipTM=0.184 tol=2.52
2024-12-08 07:52:54,257 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=48.4 pTM=0.286 ipTM=0.184 tol=2.57
2024-12-08 07:53:16,925 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=48.5 pTM=0.284 ipTM=0.185 tol=1.66
2024-12-08 07:53:39,601 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=48.2 pTM=0.283 ipTM=0.188 tol=1.99
2024-12-08 07:54:02,262 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=48.3 pTM=0.282 ipTM=0.179 tol=2.68
2024-12-08 07:54:24,945 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=48.3 pTM=0.282 ipTM=0.184 tol=2.41
2024-12-08 07:54:47,613 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=48.5 pTM=0.282 ipTM=0.18 tol=2.38
2024-12-08 07:55:10,285 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=48.7 pTM=0.281 ipTM=0.18 tol=3.26
2024-12-08 07:55:32,962 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=48.3 pTM=0.281 ipTM=0.179 tol=2.64
2024-12-08 07:55:55,639 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=48.8 pTM=0.282 ipTM=0.182 tol=2.32
2024-12-08 07:56:18,309 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=48.6 pTM=0.282 ipTM=0.176 tol=2.29
2024-12-08 07:56:40,977 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=48.2 pTM=0.283 ipTM=0.185 tol=3.3
2024-12-08 07:57:03,656 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=48.4 pTM=0.287 ipTM=0.184 tol=3.99
2024-12-08 07:57:26,329 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=48.3 pTM=0.284 ipTM=0.18 tol=4.38
2024-12-08 07:57:26,330 alphafold2_multimer_v3_model_3_seed_000 took 702.7s (30 recycles)
2024-12-08 07:57:49,601 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=45 pTM=0.3 ipTM=0.282
2024-12-08 07:58:12,215 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=45.6 pTM=0.309 ipTM=0.535 tol=13.2
2024-12-08 07:58:34,838 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=46.2 pTM=0.324 ipTM=0.775 tol=13.1
2024-12-08 07:58:57,501 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=46.9 pTM=0.328 ipTM=0.797 tol=10.4
2024-12-08 07:59:20,126 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=47.7 pTM=0.332 ipTM=0.813 tol=7.07
2024-12-08 07:59:42,755 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=46.7 pTM=0.328 ipTM=0.803 tol=5.09
2024-12-08 08:00:05,408 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=46.6 pTM=0.322 ipTM=0.802 tol=5.61
2024-12-08 08:00:28,030 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=46.9 pTM=0.329 ipTM=0.81 tol=7.82
2024-12-08 08:00:50,680 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=46.7 pTM=0.329 ipTM=0.826 tol=6.22
2024-12-08 08:01:13,321 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=46.7 pTM=0.328 ipTM=0.805 tol=5.98
2024-12-08 08:01:35,975 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=46.4 pTM=0.325 ipTM=0.818 tol=5.98
2024-12-08 08:01:58,618 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=47 pTM=0.327 ipTM=0.814 tol=6.59
2024-12-08 08:02:21,254 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=46.9 pTM=0.33 ipTM=0.824 tol=5.73
2024-12-08 08:02:43,887 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=46.8 pTM=0.328 ipTM=0.813 tol=5.59
2024-12-08 08:03:06,567 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=46.8 pTM=0.325 ipTM=0.831 tol=5.96
2024-12-08 08:03:29,199 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=47.2 pTM=0.331 ipTM=0.822 tol=5.5
2024-12-08 08:03:51,837 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=46.7 pTM=0.328 ipTM=0.81 tol=5.59
2024-12-08 08:04:14,471 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=46.8 pTM=0.329 ipTM=0.8 tol=5.32
2024-12-08 08:04:37,119 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=46.9 pTM=0.326 ipTM=0.82 tol=7.43
2024-12-08 08:04:59,775 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=47 pTM=0.328 ipTM=0.803 tol=3.9
2024-12-08 08:05:22,417 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=45.9 pTM=0.323 ipTM=0.789 tol=3.51
2024-12-08 08:05:45,065 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=46.4 pTM=0.323 ipTM=0.77 tol=2.5
2024-12-08 08:06:07,719 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=46.3 pTM=0.322 ipTM=0.793 tol=2.81
2024-12-08 08:06:30,371 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=47.1 pTM=0.329 ipTM=0.798 tol=4.17
2024-12-08 08:06:53,021 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=46.7 pTM=0.324 ipTM=0.768 tol=5.4
2024-12-08 08:07:15,668 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=46.2 pTM=0.323 ipTM=0.773 tol=4.75
2024-12-08 08:07:38,296 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=46.9 pTM=0.329 ipTM=0.778 tol=7.45
2024-12-08 08:08:00,936 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=46.8 pTM=0.327 ipTM=0.796 tol=5.97
2024-12-08 08:08:23,577 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=46.1 pTM=0.322 ipTM=0.788 tol=6.67
2024-12-08 08:08:46,206 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=46.9 pTM=0.327 ipTM=0.786 tol=3.48
2024-12-08 08:09:08,833 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=46.7 pTM=0.325 ipTM=0.795 tol=3.56
2024-12-08 08:09:08,834 alphafold2_multimer_v3_model_4_seed_000 took 701.8s (30 recycles)
2024-12-08 08:09:32,166 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=47.7 pTM=0.305 ipTM=0.23
2024-12-08 08:09:54,797 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=49.4 pTM=0.295 ipTM=0.278 tol=16.7
2024-12-08 08:10:17,422 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=49.7 pTM=0.295 ipTM=0.439 tol=8.64
2024-12-08 08:10:40,064 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=49.5 pTM=0.292 ipTM=0.323 tol=6.51
2024-12-08 08:11:02,692 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=49.8 pTM=0.29 ipTM=0.264 tol=5.75
2024-12-08 08:11:25,326 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=49.6 pTM=0.298 ipTM=0.409 tol=4.7
2024-12-08 08:11:47,960 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=49.4 pTM=0.297 ipTM=0.374 tol=6.02
2024-12-08 08:12:10,620 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=49.6 pTM=0.29 ipTM=0.272 tol=5.4
2024-12-08 08:12:33,273 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=49.3 pTM=0.288 ipTM=0.248 tol=5.84
2024-12-08 08:12:55,928 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=49.5 pTM=0.287 ipTM=0.237 tol=9.58
2024-12-08 08:13:18,571 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=49.7 pTM=0.299 ipTM=0.464 tol=8.73
2024-12-08 08:13:41,206 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=49.8 pTM=0.299 ipTM=0.435 tol=7.08
2024-12-08 08:14:03,844 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=49.6 pTM=0.292 ipTM=0.325 tol=8.73
2024-12-08 08:14:26,502 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=49.5 pTM=0.291 ipTM=0.298 tol=5.31
2024-12-08 08:14:49,144 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=49.6 pTM=0.294 ipTM=0.35 tol=4.75
2024-12-08 08:15:11,786 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=49.3 pTM=0.292 ipTM=0.316 tol=4.25
2024-12-08 08:15:34,421 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=49.5 pTM=0.291 ipTM=0.28 tol=3.69
2024-12-08 08:15:57,057 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=49.3 pTM=0.293 ipTM=0.305 tol=9.34
2024-12-08 08:16:19,699 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=49.2 pTM=0.295 ipTM=0.342 tol=5.66
2024-12-08 08:16:42,324 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=49.2 pTM=0.292 ipTM=0.281 tol=4.22
2024-12-08 08:17:04,961 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=49.2 pTM=0.288 ipTM=0.248 tol=3.7
2024-12-08 08:17:27,578 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=49.7 pTM=0.293 ipTM=0.354 tol=5.44
2024-12-08 08:17:50,204 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=49.2 pTM=0.295 ipTM=0.337 tol=2.63
2024-12-08 08:18:12,837 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=49.6 pTM=0.29 ipTM=0.251 tol=5.42
2024-12-08 08:18:35,457 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=49.8 pTM=0.29 ipTM=0.267 tol=3.07
2024-12-08 08:18:58,063 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=49.4 pTM=0.295 ipTM=0.389 tol=2.79
2024-12-08 08:19:20,662 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=49.3 pTM=0.293 ipTM=0.303 tol=2.14
2024-12-08 08:19:43,272 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=49.9 pTM=0.291 ipTM=0.259 tol=4.93
2024-12-08 08:20:05,866 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=49.9 pTM=0.301 ipTM=0.483 tol=4.27
2024-12-08 08:20:28,465 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=49.7 pTM=0.3 ipTM=0.406 tol=2.59
2024-12-08 08:20:51,054 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=49.3 pTM=0.294 ipTM=0.336 tol=3.26
2024-12-08 08:20:51,055 alphafold2_multimer_v3_model_5_seed_000 took 701.5s (30 recycles)
2024-12-08 08:20:51,730 reranking models by 'multimer' metric
2024-12-08 08:20:54,743 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-08 08:22:27,163 Relaxation took 95.4s
2024-12-08 08:22:27,163 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=46.7 pTM=0.325 ipTM=0.795
2024-12-08 08:23:42,963 Relaxation took 75.8s
2024-12-08 08:23:42,963 rank_002_alphafold2_multimer_v3_model_5_seed_000 pLDDT=49.3 pTM=0.294 ipTM=0.336
2024-12-08 08:25:30,679 Relaxation took 107.7s
2024-12-08 08:25:30,680 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=47.9 pTM=0.291 ipTM=0.193
2024-12-08 08:26:55,570 Relaxation took 84.9s
2024-12-08 08:26:55,570 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=48.3 pTM=0.284 ipTM=0.18
2024-12-08 08:28:13,918 Relaxation took 78.3s
2024-12-08 08:28:13,918 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=49.7 pTM=0.281 ipTM=0.127
2024-12-08 08:28:15,866 Done