2024-12-08 07:30:57,506 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-08 07:30:57,820 Running on GPU
2024-12-08 07:31:00,610 Found 6 citations for tools or databases
2024-12-08 07:31:00,610 Query 1/1: RNF20_CCDC53 (length 1169)
2024-12-08 07:31:00,894 Sleeping for 9s. Reason: PENDING
2024-12-08 07:31:10,151 Sleeping for 6s. Reason: RUNNING
2024-12-08 07:31:16,407 Sleeping for 5s. Reason: RUNNING
2024-12-08 07:31:21,661 Sleeping for 10s. Reason: RUNNING
2024-12-08 07:31:31,923 Sleeping for 10s. Reason: RUNNING
2024-12-08 07:31:42,180 Sleeping for 9s. Reason: RUNNING
2024-12-08 07:31:51,437 Sleeping for 9s. Reason: RUNNING
2024-12-08 07:32:00,696 Sleeping for 6s. Reason: RUNNING
2024-12-08 07:32:06,951 Sleeping for 5s. Reason: RUNNING
2024-12-08 07:32:12,211 Sleeping for 9s. Reason: RUNNING
2024-12-08 07:32:21,472 Sleeping for 10s. Reason: RUNNING
2024-12-08 07:32:33,245 Sleeping for 8s. Reason: PENDING
2024-12-08 07:32:41,508 Sleeping for 10s. Reason: RUNNING
2024-12-08 07:32:51,766 Sleeping for 9s. Reason: RUNNING
2024-12-08 07:33:01,027 Sleeping for 7s. Reason: RUNNING
2024-12-08 07:33:08,290 Sleeping for 5s. Reason: RUNNING
2024-12-08 07:33:13,544 Sleeping for 9s. Reason: RUNNING
2024-12-08 07:33:22,804 Sleeping for 8s. Reason: RUNNING
2024-12-08 07:33:34,434 Setting max_seq=508, max_extra_seq=2048
2024-12-08 07:36:56,927 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=59.2 pTM=0.252 ipTM=0.129
2024-12-08 07:37:30,444 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=58.8 pTM=0.256 ipTM=0.318 tol=22.2
2024-12-08 07:38:04,139 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=61.3 pTM=0.266 ipTM=0.363 tol=15.5
2024-12-08 07:38:37,995 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=61 pTM=0.26 ipTM=0.377 tol=9.74
2024-12-08 07:39:11,972 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=61.2 pTM=0.275 ipTM=0.381 tol=5.1
2024-12-08 07:39:45,969 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=61.2 pTM=0.286 ipTM=0.384 tol=7.11
2024-12-08 07:40:20,002 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=61.6 pTM=0.292 ipTM=0.382 tol=5.94
2024-12-08 07:40:54,042 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=61.6 pTM=0.296 ipTM=0.387 tol=4.68
2024-12-08 07:41:28,065 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=61.9 pTM=0.301 ipTM=0.39 tol=3.83
2024-12-08 07:42:02,098 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=61.1 pTM=0.301 ipTM=0.397 tol=6.16
2024-12-08 07:42:36,190 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=61.5 pTM=0.302 ipTM=0.395 tol=6.26
2024-12-08 07:43:10,302 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=61.4 pTM=0.303 ipTM=0.396 tol=8.27
2024-12-08 07:43:44,443 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=62.1 pTM=0.305 ipTM=0.395 tol=3.53
2024-12-08 07:44:18,558 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=61.9 pTM=0.306 ipTM=0.395 tol=3.54
2024-12-08 07:44:52,647 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=62 pTM=0.306 ipTM=0.391 tol=5.53
2024-12-08 07:45:26,766 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=61.9 pTM=0.305 ipTM=0.391 tol=6.96
2024-12-08 07:46:00,855 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=62.3 pTM=0.309 ipTM=0.393 tol=6.01
2024-12-08 07:46:34,953 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=61.9 pTM=0.308 ipTM=0.394 tol=7.78
2024-12-08 07:47:09,071 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=62 pTM=0.308 ipTM=0.393 tol=6.76
2024-12-08 07:47:43,182 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=61.6 pTM=0.307 ipTM=0.395 tol=2.97
2024-12-08 07:48:17,324 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=61.9 pTM=0.308 ipTM=0.393 tol=5.6
2024-12-08 07:48:51,471 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=61.8 pTM=0.308 ipTM=0.397 tol=4.46
2024-12-08 07:49:25,603 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=61.6 pTM=0.307 ipTM=0.394 tol=4.35
2024-12-08 07:49:59,695 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=61.8 pTM=0.306 ipTM=0.396 tol=2.62
2024-12-08 07:50:33,777 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=62 pTM=0.306 ipTM=0.392 tol=2.49
2024-12-08 07:51:07,871 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=61.6 pTM=0.305 ipTM=0.392 tol=4.05
2024-12-08 07:51:41,934 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=61.9 pTM=0.307 ipTM=0.395 tol=7.54
2024-12-08 07:52:15,988 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=61.6 pTM=0.303 ipTM=0.389 tol=3.14
2024-12-08 07:52:50,015 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=61.4 pTM=0.304 ipTM=0.388 tol=7.59
2024-12-08 07:53:24,039 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=61.4 pTM=0.303 ipTM=0.39 tol=3.93
2024-12-08 07:53:58,058 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=61.5 pTM=0.305 ipTM=0.392 tol=3.73
2024-12-08 07:53:58,059 alphafold2_multimer_v3_model_1_seed_000 took 1218.8s (30 recycles)
2024-12-08 07:54:32,909 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=59.4 pTM=0.259 ipTM=0.132
2024-12-08 07:55:06,975 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=57.2 pTM=0.259 ipTM=0.154 tol=64.9
2024-12-08 07:55:41,020 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=56.7 pTM=0.259 ipTM=0.34 tol=18.3
2024-12-08 07:56:15,025 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=57 pTM=0.258 ipTM=0.248 tol=7.45
2024-12-08 07:56:49,041 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=56.2 pTM=0.256 ipTM=0.335 tol=10.6
2024-12-08 07:57:23,047 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=58.2 pTM=0.255 ipTM=0.345 tol=7.65
2024-12-08 07:57:57,093 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=56.5 pTM=0.253 ipTM=0.335 tol=7.59
2024-12-08 07:58:31,080 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=59.1 pTM=0.287 ipTM=0.371 tol=9.43
2024-12-08 07:59:05,027 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=58.8 pTM=0.275 ipTM=0.348 tol=5.6
2024-12-08 07:59:38,943 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=58.8 pTM=0.269 ipTM=0.357 tol=6.77
2024-12-08 08:00:12,882 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=58.7 pTM=0.277 ipTM=0.352 tol=4.62
2024-12-08 08:00:46,831 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=57.6 pTM=0.256 ipTM=0.355 tol=4.64
2024-12-08 08:01:20,795 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=56.8 pTM=0.254 ipTM=0.353 tol=8.41
2024-12-08 08:01:54,778 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=58.5 pTM=0.26 ipTM=0.36 tol=6.01
2024-12-08 08:02:28,787 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=58.5 pTM=0.274 ipTM=0.371 tol=4.06
2024-12-08 08:03:02,814 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=59.1 pTM=0.293 ipTM=0.382 tol=7.47
2024-12-08 08:03:36,880 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=55.4 pTM=0.258 ipTM=0.336 tol=8.02
2024-12-08 08:04:10,930 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=57.9 pTM=0.271 ipTM=0.364 tol=8.81
2024-12-08 08:04:44,960 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=55.4 pTM=0.256 ipTM=0.34 tol=6.36
2024-12-08 08:05:19,009 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=57.1 pTM=0.262 ipTM=0.352 tol=4.73
2024-12-08 08:05:53,036 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=56.6 pTM=0.256 ipTM=0.347 tol=5.36
2024-12-08 08:06:27,073 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=58 pTM=0.264 ipTM=0.356 tol=5.63
2024-12-08 08:07:01,142 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=56.4 pTM=0.251 ipTM=0.36 tol=6.73
2024-12-08 08:07:35,124 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=58.3 pTM=0.263 ipTM=0.368 tol=8.93
2024-12-08 08:08:09,077 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=57.2 pTM=0.253 ipTM=0.361 tol=6.38
2024-12-08 08:08:43,034 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=58.4 pTM=0.275 ipTM=0.37 tol=7.54
2024-12-08 08:09:16,984 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=59.2 pTM=0.282 ipTM=0.365 tol=4.57
2024-12-08 08:09:50,947 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=58.9 pTM=0.278 ipTM=0.364 tol=5.12
2024-12-08 08:10:24,900 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=58.1 pTM=0.271 ipTM=0.346 tol=3.94
2024-12-08 08:10:58,876 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=58.3 pTM=0.27 ipTM=0.359 tol=2.9
2024-12-08 08:11:32,861 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=58.3 pTM=0.279 ipTM=0.359 tol=6.89
2024-12-08 08:11:32,862 alphafold2_multimer_v3_model_2_seed_000 took 1054.0s (30 recycles)
2024-12-08 08:12:07,817 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=58.8 pTM=0.267 ipTM=0.143
2024-12-08 08:12:41,979 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=62.2 pTM=0.311 ipTM=0.387 tol=17.2
2024-12-08 08:13:16,132 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=63.3 pTM=0.319 ipTM=0.389 tol=16.8
2024-12-08 08:13:50,255 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=63.2 pTM=0.314 ipTM=0.38 tol=10
2024-12-08 08:14:24,354 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=62.8 pTM=0.311 ipTM=0.376 tol=9.39
2024-12-08 08:14:58,471 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=62.9 pTM=0.313 ipTM=0.378 tol=10.6
2024-12-08 08:15:32,580 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=62.8 pTM=0.312 ipTM=0.376 tol=6
2024-12-08 08:16:06,688 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=62.8 pTM=0.315 ipTM=0.378 tol=5
2024-12-08 08:16:40,767 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=62.6 pTM=0.311 ipTM=0.378 tol=3.18
2024-12-08 08:17:14,801 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=63 pTM=0.313 ipTM=0.38 tol=3.08
2024-12-08 08:17:48,809 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=63.2 pTM=0.312 ipTM=0.378 tol=4.69
2024-12-08 08:18:22,851 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=63 pTM=0.31 ipTM=0.375 tol=4.57
2024-12-08 08:18:56,908 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=62.8 pTM=0.309 ipTM=0.37 tol=4.73
2024-12-08 08:19:30,941 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=63.3 pTM=0.312 ipTM=0.373 tol=2.19
2024-12-08 08:20:04,989 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=63.3 pTM=0.313 ipTM=0.374 tol=2.46
2024-12-08 08:20:39,025 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=63.3 pTM=0.311 ipTM=0.373 tol=2.04
2024-12-08 08:21:13,085 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=63.2 pTM=0.312 ipTM=0.375 tol=2.6
2024-12-08 08:21:47,151 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=63.5 pTM=0.314 ipTM=0.38 tol=1.86
2024-12-08 08:22:21,191 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=63.1 pTM=0.312 ipTM=0.378 tol=4.18
2024-12-08 08:22:55,198 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=63.4 pTM=0.311 ipTM=0.378 tol=2.06
2024-12-08 08:23:29,190 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=63.7 pTM=0.312 ipTM=0.377 tol=3.71
2024-12-08 08:24:03,185 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=63.3 pTM=0.311 ipTM=0.374 tol=3.6
2024-12-08 08:24:37,140 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=63.5 pTM=0.311 ipTM=0.374 tol=4.94
2024-12-08 08:25:11,059 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=63.3 pTM=0.311 ipTM=0.372 tol=2.52
2024-12-08 08:25:45,026 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=63.6 pTM=0.311 ipTM=0.372 tol=2.27
2024-12-08 08:26:18,958 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=63.9 pTM=0.315 ipTM=0.38 tol=3.66
2024-12-08 08:26:52,915 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=63.7 pTM=0.314 ipTM=0.38 tol=3.91
2024-12-08 08:27:26,887 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=63.1 pTM=0.313 ipTM=0.379 tol=2.56
2024-12-08 08:28:00,873 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=63.3 pTM=0.314 ipTM=0.38 tol=1.72
2024-12-08 08:28:34,888 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=63.7 pTM=0.312 ipTM=0.378 tol=1.92
2024-12-08 08:29:08,903 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=63.6 pTM=0.315 ipTM=0.38 tol=1.64
2024-12-08 08:29:08,903 alphafold2_multimer_v3_model_3_seed_000 took 1055.2s (30 recycles)
2024-12-08 08:29:43,843 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=56.4 pTM=0.25 ipTM=0.143
2024-12-08 08:30:17,937 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=58.2 pTM=0.271 ipTM=0.329 tol=25.3
2024-12-08 08:30:52,060 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=55.7 pTM=0.249 ipTM=0.325 tol=14.2
2024-12-08 08:31:26,218 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=55.4 pTM=0.248 ipTM=0.313 tol=6.23
2024-12-08 08:32:00,358 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=56 pTM=0.249 ipTM=0.335 tol=5.17
2024-12-08 08:32:34,519 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=55.9 pTM=0.249 ipTM=0.339 tol=5.37
2024-12-08 08:33:08,661 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=56.6 pTM=0.26 ipTM=0.348 tol=3.87
2024-12-08 08:33:42,819 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=55.6 pTM=0.247 ipTM=0.321 tol=4.71
2024-12-08 08:34:16,967 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=55.7 pTM=0.247 ipTM=0.338 tol=4.06
2024-12-08 08:34:51,088 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=55.2 pTM=0.247 ipTM=0.321 tol=3.12
2024-12-08 08:35:25,155 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=55.4 pTM=0.245 ipTM=0.332 tol=3.42
2024-12-08 08:35:59,274 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=54.9 pTM=0.244 ipTM=0.314 tol=3.75
2024-12-08 08:36:33,364 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=55.6 pTM=0.246 ipTM=0.339 tol=3.39
2024-12-08 08:37:07,481 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=55.6 pTM=0.247 ipTM=0.333 tol=2.45
2024-12-08 08:37:41,638 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=55.9 pTM=0.246 ipTM=0.33 tol=3.99
2024-12-08 08:38:15,847 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=56.5 pTM=0.249 ipTM=0.331 tol=4.76
2024-12-08 08:38:50,031 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=56.2 pTM=0.251 ipTM=0.333 tol=4.08
2024-12-08 08:39:24,214 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=56 pTM=0.247 ipTM=0.329 tol=3.44
2024-12-08 08:39:58,380 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=55.8 pTM=0.246 ipTM=0.331 tol=4.55
2024-12-08 08:40:32,572 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=55.8 pTM=0.247 ipTM=0.331 tol=4.27
2024-12-08 08:41:06,697 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=56.2 pTM=0.253 ipTM=0.336 tol=2.88
2024-12-08 08:41:40,868 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=55.8 pTM=0.249 ipTM=0.33 tol=3.55
2024-12-08 08:42:15,038 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=55.4 pTM=0.246 ipTM=0.321 tol=3.93
2024-12-08 08:42:49,187 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=56.2 pTM=0.245 ipTM=0.346 tol=2.85
2024-12-08 08:43:23,329 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=56.3 pTM=0.248 ipTM=0.341 tol=2.96
2024-12-08 08:43:57,443 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=55.8 pTM=0.248 ipTM=0.334 tol=3.6
2024-12-08 08:44:31,508 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=55.9 pTM=0.25 ipTM=0.348 tol=3.19
2024-12-08 08:45:05,662 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=53.5 pTM=0.248 ipTM=0.304 tol=9.47
2024-12-08 08:45:39,846 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=55.2 pTM=0.244 ipTM=0.302 tol=10.1
2024-12-08 08:46:13,969 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=56.5 pTM=0.262 ipTM=0.329 tol=4.24
2024-12-08 08:46:48,119 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=55.1 pTM=0.247 ipTM=0.32 tol=2.75
2024-12-08 08:46:48,120 alphafold2_multimer_v3_model_4_seed_000 took 1058.4s (30 recycles)
2024-12-08 08:47:23,005 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=56.2 pTM=0.27 ipTM=0.146
2024-12-08 08:47:57,061 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=57.2 pTM=0.314 ipTM=0.321 tol=17.2
2024-12-08 08:48:31,144 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=56.6 pTM=0.323 ipTM=0.358 tol=13.8
2024-12-08 08:49:05,204 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=58.9 pTM=0.322 ipTM=0.349 tol=12.9
2024-12-08 08:49:39,253 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=58.9 pTM=0.325 ipTM=0.344 tol=8.62
2024-12-08 08:50:13,335 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=58.4 pTM=0.327 ipTM=0.356 tol=8.6
2024-12-08 08:50:47,353 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=59 pTM=0.32 ipTM=0.36 tol=8.43
2024-12-08 08:51:21,332 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=60 pTM=0.331 ipTM=0.371 tol=6.67
2024-12-08 08:51:55,312 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=58.3 pTM=0.326 ipTM=0.363 tol=6.33
2024-12-08 08:52:29,285 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=57.7 pTM=0.342 ipTM=0.375 tol=8.71
2024-12-08 08:53:03,267 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=58.9 pTM=0.334 ipTM=0.375 tol=6.96
2024-12-08 08:53:37,265 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=58.9 pTM=0.329 ipTM=0.373 tol=10.2
2024-12-08 08:54:11,284 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=59.4 pTM=0.328 ipTM=0.375 tol=8.52
2024-12-08 08:54:45,322 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=59.2 pTM=0.323 ipTM=0.372 tol=5.46
2024-12-08 08:55:19,355 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=59.3 pTM=0.32 ipTM=0.373 tol=6.33
2024-12-08 08:55:53,403 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=60.7 pTM=0.322 ipTM=0.379 tol=4.93
2024-12-08 08:56:27,473 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=59.9 pTM=0.316 ipTM=0.378 tol=5.3
2024-12-08 08:57:01,511 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=60.3 pTM=0.317 ipTM=0.38 tol=4.53
2024-12-08 08:57:35,504 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=60.4 pTM=0.317 ipTM=0.386 tol=2.62
2024-12-08 08:58:09,521 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=60.4 pTM=0.315 ipTM=0.387 tol=8.02
2024-12-08 08:58:43,528 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=60.5 pTM=0.314 ipTM=0.379 tol=4.25
2024-12-08 08:59:17,515 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=60.4 pTM=0.313 ipTM=0.377 tol=7.79
2024-12-08 08:59:51,522 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=60.4 pTM=0.31 ipTM=0.366 tol=5.52
2024-12-08 09:00:25,522 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=61 pTM=0.311 ipTM=0.366 tol=5.43
2024-12-08 09:00:59,498 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=61.6 pTM=0.314 ipTM=0.365 tol=3.64
2024-12-08 09:01:33,442 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=61.4 pTM=0.314 ipTM=0.367 tol=4.56
2024-12-08 09:02:07,310 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=60 pTM=0.315 ipTM=0.368 tol=19.1
2024-12-08 09:02:41,177 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=61.1 pTM=0.313 ipTM=0.371 tol=16.3
2024-12-08 09:03:15,021 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=61.1 pTM=0.315 ipTM=0.366 tol=4.23
2024-12-08 09:03:48,895 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=60.9 pTM=0.312 ipTM=0.364 tol=3.12
2024-12-08 09:04:22,787 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=60.9 pTM=0.314 ipTM=0.363 tol=1.93
2024-12-08 09:04:22,787 alphafold2_multimer_v3_model_5_seed_000 took 1053.8s (30 recycles)
2024-12-08 09:04:23,626 reranking models by 'multimer' metric
2024-12-08 09:04:24,711 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-08 09:05:50,515 Relaxation took 86.9s
2024-12-08 09:05:50,516 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=61.5 pTM=0.305 ipTM=0.392
2024-12-08 09:07:24,248 Relaxation took 93.7s
2024-12-08 09:07:24,248 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=63.6 pTM=0.315 ipTM=0.38
2024-12-08 09:08:18,909 Relaxation took 54.7s
2024-12-08 09:08:18,909 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=60.9 pTM=0.314 ipTM=0.363
2024-12-08 09:09:56,873 Relaxation took 98.0s
2024-12-08 09:09:56,873 rank_004_alphafold2_multimer_v3_model_2_seed_000 pLDDT=58.3 pTM=0.279 ipTM=0.359
2024-12-08 09:11:13,579 Relaxation took 76.7s
2024-12-08 09:11:13,579 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=55.1 pTM=0.247 ipTM=0.32
2024-12-08 09:11:15,974 Done