2024-12-08 07:33:26,669 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-08 07:33:26,983 Running on GPU
2024-12-08 07:33:28,677 Found 6 citations for tools or databases
2024-12-08 07:33:28,677 Query 1/1: RNF20_PSMD7 (length 1299)
2024-12-08 07:33:28,939 Sleeping for 10s. Reason: PENDING
2024-12-08 07:33:39,199 Sleeping for 8s. Reason: RUNNING
2024-12-08 07:33:47,455 Sleeping for 7s. Reason: RUNNING
2024-12-08 07:33:54,716 Sleeping for 6s. Reason: RUNNING
2024-12-08 07:34:00,971 Sleeping for 6s. Reason: RUNNING
2024-12-08 07:34:07,236 Sleeping for 10s. Reason: RUNNING
2024-12-08 07:34:17,495 Sleeping for 9s. Reason: RUNNING
2024-12-08 07:34:26,756 Sleeping for 10s. Reason: RUNNING
2024-12-08 07:34:37,021 Sleeping for 5s. Reason: RUNNING
2024-12-08 07:34:42,284 Sleeping for 10s. Reason: RUNNING
2024-12-08 07:34:52,702 Sleeping for 6s. Reason: RUNNING
2024-12-08 07:34:58,967 Sleeping for 5s. Reason: RUNNING
2024-12-08 07:35:04,231 Sleeping for 7s. Reason: RUNNING
2024-12-08 07:35:11,489 Sleeping for 9s. Reason: RUNNING
2024-12-08 07:35:22,263 Sleeping for 9s. Reason: PENDING
2024-12-08 07:35:31,526 Sleeping for 5s. Reason: RUNNING
2024-12-08 07:35:36,781 Sleeping for 5s. Reason: RUNNING
2024-12-08 07:35:42,070 Sleeping for 5s. Reason: RUNNING
2024-12-08 07:35:47,334 Sleeping for 7s. Reason: RUNNING
2024-12-08 07:35:54,593 Sleeping for 6s. Reason: RUNNING
2024-12-08 07:36:00,847 Sleeping for 8s. Reason: RUNNING
2024-12-08 07:36:09,110 Sleeping for 5s. Reason: RUNNING
2024-12-08 07:36:14,368 Sleeping for 5s. Reason: RUNNING
2024-12-08 07:36:19,628 Sleeping for 5s. Reason: RUNNING
2024-12-08 07:36:24,882 Sleeping for 7s. Reason: RUNNING
2024-12-08 07:36:32,146 Sleeping for 8s. Reason: RUNNING
2024-12-08 07:36:44,070 Setting max_seq=508, max_extra_seq=2048
2024-12-08 07:40:10,225 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=58.1 pTM=0.252 ipTM=0.162
2024-12-08 07:40:54,230 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=58.8 pTM=0.245 ipTM=0.143 tol=19.7
2024-12-08 07:41:38,321 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=59.3 pTM=0.252 ipTM=0.145 tol=11.4
2024-12-08 07:42:22,451 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=58.8 pTM=0.253 ipTM=0.147 tol=8.77
2024-12-08 07:43:06,605 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=59.2 pTM=0.256 ipTM=0.153 tol=8.91
2024-12-08 07:43:50,785 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=59.6 pTM=0.267 ipTM=0.202 tol=9.06
2024-12-08 07:44:34,973 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=59 pTM=0.279 ipTM=0.281 tol=8.45
2024-12-08 07:45:19,152 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=59.5 pTM=0.28 ipTM=0.292 tol=6.63
2024-12-08 07:46:03,306 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=59.9 pTM=0.272 ipTM=0.231 tol=4.96
2024-12-08 07:46:47,485 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=60 pTM=0.273 ipTM=0.238 tol=5.44
2024-12-08 07:47:31,654 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=60.2 pTM=0.271 ipTM=0.227 tol=4.03
2024-12-08 07:48:15,806 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=59.7 pTM=0.271 ipTM=0.222 tol=3.98
2024-12-08 07:48:59,948 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=60.1 pTM=0.267 ipTM=0.203 tol=3.21
2024-12-08 07:49:44,100 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=60.2 pTM=0.265 ipTM=0.185 tol=3
2024-12-08 07:50:28,242 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=60.5 pTM=0.267 ipTM=0.189 tol=3.65
2024-12-08 07:51:12,431 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=60.1 pTM=0.263 ipTM=0.174 tol=2.37
2024-12-08 07:51:56,601 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=60.2 pTM=0.262 ipTM=0.166 tol=3.51
2024-12-08 07:52:40,759 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=59.9 pTM=0.261 ipTM=0.165 tol=4.36
2024-12-08 07:53:24,909 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=59.8 pTM=0.267 ipTM=0.198 tol=4.49
2024-12-08 07:54:09,053 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=59.3 pTM=0.272 ipTM=0.225 tol=4.04
2024-12-08 07:54:53,211 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=60.1 pTM=0.275 ipTM=0.234 tol=3.2
2024-12-08 07:55:37,362 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=59.7 pTM=0.275 ipTM=0.246 tol=3.25
2024-12-08 07:56:21,498 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=59.7 pTM=0.273 ipTM=0.238 tol=2.86
2024-12-08 07:57:05,656 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=60 pTM=0.274 ipTM=0.227 tol=3.54
2024-12-08 07:57:49,794 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=60.1 pTM=0.271 ipTM=0.227 tol=3.14
2024-12-08 07:58:33,964 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=59.6 pTM=0.272 ipTM=0.234 tol=2.52
2024-12-08 07:59:18,109 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=59.9 pTM=0.275 ipTM=0.243 tol=3.99
2024-12-08 08:00:02,272 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=58.9 pTM=0.279 ipTM=0.26 tol=4.86
2024-12-08 08:00:46,425 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=59.3 pTM=0.287 ipTM=0.301 tol=4.59
2024-12-08 08:01:30,593 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=59.3 pTM=0.287 ipTM=0.313 tol=2.76
2024-12-08 08:02:14,762 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=59.5 pTM=0.287 ipTM=0.307 tol=4.68
2024-12-08 08:02:14,763 alphafold2_multimer_v3_model_1_seed_000 took 1525.5s (30 recycles)
2024-12-08 08:02:59,981 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=59.8 pTM=0.249 ipTM=0.163
2024-12-08 08:03:44,179 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=60.2 pTM=0.26 ipTM=0.209 tol=19.9
2024-12-08 08:04:28,400 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=58.4 pTM=0.264 ipTM=0.197 tol=12.3
2024-12-08 08:05:12,620 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=58.6 pTM=0.253 ipTM=0.17 tol=10.3
2024-12-08 08:05:56,875 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=56 pTM=0.251 ipTM=0.161 tol=11
2024-12-08 08:06:41,148 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=57.7 pTM=0.249 ipTM=0.155 tol=8.64
2024-12-08 08:07:25,418 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=56.2 pTM=0.252 ipTM=0.164 tol=9.78
2024-12-08 08:08:09,719 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=58.3 pTM=0.247 ipTM=0.155 tol=9.35
2024-12-08 08:08:53,973 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=57.8 pTM=0.25 ipTM=0.16 tol=8.61
2024-12-08 08:09:38,250 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=58.8 pTM=0.248 ipTM=0.155 tol=8.15
2024-12-08 08:10:22,501 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=58.7 pTM=0.246 ipTM=0.152 tol=8
2024-12-08 08:11:06,788 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=58.3 pTM=0.246 ipTM=0.152 tol=5.97
2024-12-08 08:11:51,058 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=56.3 pTM=0.247 ipTM=0.152 tol=8.95
2024-12-08 08:12:35,318 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=58.4 pTM=0.25 ipTM=0.156 tol=9.42
2024-12-08 08:13:19,564 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=57.8 pTM=0.249 ipTM=0.159 tol=8.52
2024-12-08 08:14:03,824 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=58.1 pTM=0.249 ipTM=0.162 tol=9.84
2024-12-08 08:14:48,033 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=58.3 pTM=0.257 ipTM=0.195 tol=7.7
2024-12-08 08:15:32,250 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=58 pTM=0.262 ipTM=0.205 tol=7.56
2024-12-08 08:16:16,457 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=58.2 pTM=0.262 ipTM=0.212 tol=5.29
2024-12-08 08:17:00,634 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=57.9 pTM=0.259 ipTM=0.211 tol=3.17
2024-12-08 08:17:44,832 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=58.7 pTM=0.262 ipTM=0.212 tol=4.24
2024-12-08 08:18:29,047 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=58.4 pTM=0.263 ipTM=0.216 tol=5.29
2024-12-08 08:19:13,265 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=57.3 pTM=0.26 ipTM=0.209 tol=6.47
2024-12-08 08:19:57,482 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=58.6 pTM=0.258 ipTM=0.199 tol=7.55
2024-12-08 08:20:41,666 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=58 pTM=0.26 ipTM=0.203 tol=5.81
2024-12-08 08:21:25,816 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=59.9 pTM=0.259 ipTM=0.205 tol=7.94
2024-12-08 08:22:09,950 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=60.6 pTM=0.265 ipTM=0.215 tol=4.17
2024-12-08 08:22:54,100 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=59.2 pTM=0.262 ipTM=0.211 tol=4.38
2024-12-08 08:23:38,248 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=59.8 pTM=0.264 ipTM=0.215 tol=3.79
2024-12-08 08:24:22,389 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=59.1 pTM=0.265 ipTM=0.222 tol=5.64
2024-12-08 08:25:06,530 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=59.5 pTM=0.265 ipTM=0.225 tol=5.47
2024-12-08 08:25:06,532 alphafold2_multimer_v3_model_2_seed_000 took 1370.7s (30 recycles)
2024-12-08 08:25:51,744 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=62.3 pTM=0.292 ipTM=0.279
2024-12-08 08:26:36,070 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=63.4 pTM=0.269 ipTM=0.202 tol=25.2
2024-12-08 08:27:20,427 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=63 pTM=0.256 ipTM=0.21 tol=19.5
2024-12-08 08:28:04,756 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=62.2 pTM=0.256 ipTM=0.17 tol=12.1
2024-12-08 08:28:49,081 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=61.3 pTM=0.254 ipTM=0.161 tol=14.2
2024-12-08 08:29:33,346 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=62.7 pTM=0.259 ipTM=0.16 tol=8.16
2024-12-08 08:30:17,670 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=62.2 pTM=0.258 ipTM=0.152 tol=8.3
2024-12-08 08:31:01,946 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=62.2 pTM=0.259 ipTM=0.155 tol=2.76
2024-12-08 08:31:46,240 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=61.8 pTM=0.26 ipTM=0.159 tol=5.55
2024-12-08 08:32:30,510 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=62 pTM=0.261 ipTM=0.165 tol=4.77
2024-12-08 08:33:14,810 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=61.9 pTM=0.262 ipTM=0.166 tol=5.58
2024-12-08 08:33:59,119 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=61.4 pTM=0.26 ipTM=0.168 tol=3.43
2024-12-08 08:34:43,396 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=61.4 pTM=0.261 ipTM=0.171 tol=2.66
2024-12-08 08:35:27,689 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=61.9 pTM=0.261 ipTM=0.17 tol=3.61
2024-12-08 08:36:11,975 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=62 pTM=0.264 ipTM=0.176 tol=2.1
2024-12-08 08:36:56,288 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=62 pTM=0.262 ipTM=0.17 tol=5.52
2024-12-08 08:37:40,586 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=62.1 pTM=0.263 ipTM=0.17 tol=7.2
2024-12-08 08:38:24,873 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=62.3 pTM=0.263 ipTM=0.167 tol=4.68
2024-12-08 08:39:09,270 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=61.1 pTM=0.264 ipTM=0.185 tol=14.5
2024-12-08 08:39:53,619 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=61.9 pTM=0.266 ipTM=0.178 tol=7.33
2024-12-08 08:40:37,875 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=61.9 pTM=0.277 ipTM=0.23 tol=7.98
2024-12-08 08:41:22,171 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=61.7 pTM=0.274 ipTM=0.215 tol=5.39
2024-12-08 08:42:06,430 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=61.8 pTM=0.281 ipTM=0.235 tol=3.2
2024-12-08 08:42:50,708 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=61.8 pTM=0.271 ipTM=0.218 tol=2.84
2024-12-08 08:43:34,994 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=61.9 pTM=0.273 ipTM=0.213 tol=2.38
2024-12-08 08:44:19,237 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=61.7 pTM=0.274 ipTM=0.222 tol=6.52
2024-12-08 08:45:03,476 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=62.5 pTM=0.272 ipTM=0.205 tol=5.95
2024-12-08 08:45:47,726 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=62.4 pTM=0.274 ipTM=0.209 tol=5.45
2024-12-08 08:46:31,946 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=62.2 pTM=0.278 ipTM=0.214 tol=6.56
2024-12-08 08:47:16,169 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=62.7 pTM=0.284 ipTM=0.235 tol=8.63
2024-12-08 08:48:00,338 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=61.2 pTM=0.29 ipTM=0.245 tol=16.3
2024-12-08 08:48:00,339 alphafold2_multimer_v3_model_3_seed_000 took 1372.8s (30 recycles)
2024-12-08 08:48:45,830 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=52.4 pTM=0.242 ipTM=0.191
2024-12-08 08:49:30,310 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=54.5 pTM=0.244 ipTM=0.166 tol=19
2024-12-08 08:50:14,820 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=53.8 pTM=0.238 ipTM=0.147 tol=19.5
2024-12-08 08:50:59,290 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=54 pTM=0.241 ipTM=0.152 tol=9.38
2024-12-08 08:51:43,750 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=54.3 pTM=0.241 ipTM=0.143 tol=10.8
2024-12-08 08:52:28,223 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=53.8 pTM=0.245 ipTM=0.147 tol=6.81
2024-12-08 08:53:12,695 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=53.5 pTM=0.244 ipTM=0.146 tol=3.82
2024-12-08 08:53:57,173 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=53 pTM=0.247 ipTM=0.154 tol=3.99
2024-12-08 08:54:41,650 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=52.8 pTM=0.244 ipTM=0.15 tol=9.29
2024-12-08 08:55:26,132 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=52.9 pTM=0.247 ipTM=0.152 tol=6.69
2024-12-08 08:56:10,589 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=52.8 pTM=0.249 ipTM=0.146 tol=5.95
2024-12-08 08:56:55,064 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=52.6 pTM=0.25 ipTM=0.149 tol=5.74
2024-12-08 08:57:39,532 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=52.4 pTM=0.249 ipTM=0.147 tol=11.1
2024-12-08 08:58:23,997 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=51.8 pTM=0.25 ipTM=0.148 tol=9.64
2024-12-08 08:59:08,427 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=52.3 pTM=0.25 ipTM=0.15 tol=19.6
2024-12-08 08:59:52,838 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=51.8 pTM=0.251 ipTM=0.147 tol=6.93
2024-12-08 09:00:37,270 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=52.5 pTM=0.248 ipTM=0.146 tol=6.83
2024-12-08 09:01:21,756 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=52.3 pTM=0.248 ipTM=0.143 tol=5.32
2024-12-08 09:02:06,278 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=52.5 pTM=0.246 ipTM=0.145 tol=7.5
2024-12-08 09:02:50,785 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=52.6 pTM=0.245 ipTM=0.148 tol=5
2024-12-08 09:03:35,291 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=52.2 pTM=0.248 ipTM=0.149 tol=6.76
2024-12-08 09:04:19,828 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=52.3 pTM=0.246 ipTM=0.149 tol=11.2
2024-12-08 09:05:04,363 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=52.3 pTM=0.247 ipTM=0.146 tol=12.2
2024-12-08 09:05:48,885 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=52.5 pTM=0.248 ipTM=0.144 tol=5.71
2024-12-08 09:06:33,398 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=52.2 pTM=0.249 ipTM=0.15 tol=7.12
2024-12-08 09:07:17,953 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=51.9 pTM=0.246 ipTM=0.149 tol=8.92
2024-12-08 09:08:02,456 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=51.9 pTM=0.249 ipTM=0.15 tol=11.7
2024-12-08 09:08:47,016 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=52.3 pTM=0.249 ipTM=0.146 tol=14.5
2024-12-08 09:09:31,552 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=51.8 pTM=0.252 ipTM=0.145 tol=10
2024-12-08 09:10:16,087 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=52.4 pTM=0.251 ipTM=0.149 tol=4.84
2024-12-08 09:11:00,619 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=52.3 pTM=0.25 ipTM=0.152 tol=6.39
2024-12-08 09:11:00,620 alphafold2_multimer_v3_model_4_seed_000 took 1379.3s (30 recycles)
2024-12-08 09:11:45,844 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=58.4 pTM=0.257 ipTM=0.172
2024-12-08 09:12:30,071 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=60.8 pTM=0.266 ipTM=0.214 tol=16.8
2024-12-08 09:13:14,265 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=60.7 pTM=0.263 ipTM=0.194 tol=11.9
2024-12-08 09:13:58,443 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=61.1 pTM=0.261 ipTM=0.173 tol=9.88
2024-12-08 09:14:42,665 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=61.1 pTM=0.256 ipTM=0.173 tol=6.66
2024-12-08 09:15:26,944 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=60.8 pTM=0.257 ipTM=0.173 tol=4.13
2024-12-08 09:16:11,248 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=59.9 pTM=0.254 ipTM=0.159 tol=8.71
2024-12-08 09:16:55,536 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=60.3 pTM=0.254 ipTM=0.166 tol=5.64
2024-12-08 09:17:39,782 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=59.5 pTM=0.256 ipTM=0.175 tol=7.99
2024-12-08 09:18:23,978 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=60.6 pTM=0.259 ipTM=0.187 tol=6.54
2024-12-08 09:19:08,099 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=61.5 pTM=0.264 ipTM=0.208 tol=7.56
2024-12-08 09:19:52,279 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=60.5 pTM=0.266 ipTM=0.194 tol=5.46
2024-12-08 09:20:36,373 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=61.8 pTM=0.27 ipTM=0.221 tol=5.31
2024-12-08 09:21:20,498 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=60.7 pTM=0.27 ipTM=0.209 tol=5.95
2024-12-08 09:22:04,603 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=62 pTM=0.273 ipTM=0.206 tol=6.34
2024-12-08 09:22:48,733 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=61.1 pTM=0.271 ipTM=0.19 tol=4.64
2024-12-08 09:23:32,874 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=60.5 pTM=0.269 ipTM=0.179 tol=9.21
2024-12-08 09:24:17,017 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=61.1 pTM=0.268 ipTM=0.182 tol=4.46
2024-12-08 09:25:01,137 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=62.5 pTM=0.264 ipTM=0.193 tol=9.54
2024-12-08 09:25:45,278 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=62.2 pTM=0.269 ipTM=0.189 tol=4.34
2024-12-08 09:26:29,426 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=57.7 pTM=0.272 ipTM=0.188 tol=28.4
2024-12-08 09:27:13,724 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=58.6 pTM=0.26 ipTM=0.152 tol=22.9
2024-12-08 09:27:57,955 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=60.2 pTM=0.258 ipTM=0.151 tol=11.9
2024-12-08 09:28:42,207 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=59.7 pTM=0.261 ipTM=0.16 tol=6.29
2024-12-08 09:29:26,492 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=59.8 pTM=0.259 ipTM=0.155 tol=5.05
2024-12-08 09:30:10,762 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=59.7 pTM=0.259 ipTM=0.152 tol=4.82
2024-12-08 09:30:55,009 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=59.5 pTM=0.259 ipTM=0.156 tol=4.41
2024-12-08 09:31:39,213 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=59.5 pTM=0.259 ipTM=0.167 tol=5.61
2024-12-08 09:32:23,405 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=58.8 pTM=0.261 ipTM=0.166 tol=4.45
2024-12-08 09:33:07,603 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=59.4 pTM=0.263 ipTM=0.176 tol=3.76
2024-12-08 09:33:51,855 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=59.3 pTM=0.262 ipTM=0.164 tol=4.62
2024-12-08 09:33:51,856 alphafold2_multimer_v3_model_5_seed_000 took 1370.2s (30 recycles)
2024-12-08 09:33:52,865 reranking models by 'multimer' metric
2024-12-08 09:33:56,592 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-08 09:36:09,246 Relaxation took 136.4s
2024-12-08 09:36:09,247 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=59.5 pTM=0.287 ipTM=0.307
2024-12-08 09:39:58,122 Relaxation took 228.9s
2024-12-08 09:39:58,123 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=61.2 pTM=0.29 ipTM=0.245
2024-12-08 09:42:18,854 Relaxation took 140.7s
2024-12-08 09:42:18,854 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=59.5 pTM=0.265 ipTM=0.225
2024-12-08 09:44:16,185 Relaxation took 117.3s
2024-12-08 09:44:16,185 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=59.3 pTM=0.262 ipTM=0.164
2024-12-08 09:46:28,545 Relaxation took 132.4s
2024-12-08 09:46:28,545 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=52.3 pTM=0.25 ipTM=0.152
2024-12-08 09:46:31,127 Done