2024-12-08 07:35:45,895 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-08 07:35:46,198 Running on GPU
2024-12-08 07:35:47,832 Found 6 citations for tools or databases
2024-12-08 07:35:47,832 Query 1/1: RNF20_UBE2B (length 1127)
2024-12-08 07:35:48,120 Sleeping for 10s. Reason: PENDING
2024-12-08 07:35:58,377 Sleeping for 8s. Reason: PENDING
2024-12-08 07:36:06,635 Sleeping for 6s. Reason: RUNNING
2024-12-08 07:36:12,888 Sleeping for 8s. Reason: RUNNING
2024-12-08 07:36:21,141 Sleeping for 8s. Reason: RUNNING
2024-12-08 07:36:29,393 Sleeping for 9s. Reason: RUNNING
2024-12-08 07:36:38,651 Sleeping for 9s. Reason: RUNNING
2024-12-08 07:36:47,919 Sleeping for 6s. Reason: RUNNING
2024-12-08 07:36:54,169 Sleeping for 8s. Reason: RUNNING
2024-12-08 07:37:02,432 Sleeping for 10s. Reason: RUNNING
2024-12-08 07:37:12,700 Sleeping for 9s. Reason: RUNNING
2024-12-08 07:37:21,960 Sleeping for 8s. Reason: RUNNING
2024-12-08 07:37:30,217 Sleeping for 10s. Reason: RUNNING
2024-12-08 07:37:40,472 Sleeping for 9s. Reason: RUNNING
2024-12-08 07:37:49,886 Sleeping for 5s. Reason: RUNNING
2024-12-08 07:37:55,138 Sleeping for 8s. Reason: RUNNING
2024-12-08 07:38:03,396 Sleeping for 8s. Reason: RUNNING
2024-12-08 07:38:11,656 Sleeping for 10s. Reason: RUNNING
2024-12-08 07:38:23,581 Sleeping for 9s. Reason: PENDING
2024-12-08 07:38:32,841 Sleeping for 9s. Reason: RUNNING
2024-12-08 07:38:42,100 Sleeping for 6s. Reason: RUNNING
2024-12-08 07:38:48,359 Sleeping for 10s. Reason: RUNNING
2024-12-08 07:38:58,621 Sleeping for 10s. Reason: RUNNING
2024-12-08 07:39:08,883 Sleeping for 9s. Reason: RUNNING
2024-12-08 07:39:18,149 Sleeping for 6s. Reason: RUNNING
2024-12-08 07:39:24,410 Sleeping for 6s. Reason: RUNNING
2024-12-08 07:39:30,666 Sleeping for 5s. Reason: RUNNING
2024-12-08 07:39:35,919 Sleeping for 9s. Reason: RUNNING
2024-12-08 07:39:49,040 Setting max_seq=508, max_extra_seq=2048
2024-12-08 07:42:55,536 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=60.2 pTM=0.288 ipTM=0.524
2024-12-08 07:43:25,437 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=61.1 pTM=0.303 ipTM=0.539 tol=30.7
2024-12-08 07:43:55,474 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=62.3 pTM=0.323 ipTM=0.815 tol=17.7
2024-12-08 07:44:25,637 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=63.5 pTM=0.322 ipTM=0.822 tol=18.5
2024-12-08 07:44:55,877 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=63.6 pTM=0.327 ipTM=0.828 tol=5.91
2024-12-08 07:45:26,184 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=63.9 pTM=0.322 ipTM=0.819 tol=11.7
2024-12-08 07:45:56,541 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=63 pTM=0.322 ipTM=0.817 tol=9.47
2024-12-08 07:46:26,911 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=64 pTM=0.321 ipTM=0.812 tol=5.36
2024-12-08 07:46:57,289 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=64.4 pTM=0.321 ipTM=0.813 tol=4.6
2024-12-08 07:47:27,660 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=64.6 pTM=0.322 ipTM=0.808 tol=3.29
2024-12-08 07:47:58,047 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=64.9 pTM=0.325 ipTM=0.816 tol=3.22
2024-12-08 07:48:28,447 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=64.4 pTM=0.325 ipTM=0.819 tol=1.93
2024-12-08 07:48:58,861 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=64.9 pTM=0.327 ipTM=0.826 tol=2.57
2024-12-08 07:49:29,255 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=64.9 pTM=0.325 ipTM=0.823 tol=1.91
2024-12-08 07:49:59,634 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=65.2 pTM=0.321 ipTM=0.82 tol=2.4
2024-12-08 07:50:29,991 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=65.2 pTM=0.323 ipTM=0.822 tol=2.62
2024-12-08 07:51:00,330 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=64.9 pTM=0.325 ipTM=0.822 tol=3.61
2024-12-08 07:51:30,686 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=64.9 pTM=0.326 ipTM=0.827 tol=3.46
2024-12-08 07:52:01,014 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=64.8 pTM=0.324 ipTM=0.827 tol=4.84
2024-12-08 07:52:31,310 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=65.2 pTM=0.325 ipTM=0.829 tol=2.96
2024-12-08 07:53:01,615 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=65.2 pTM=0.324 ipTM=0.826 tol=3.65
2024-12-08 07:53:31,936 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=64.8 pTM=0.328 ipTM=0.833 tol=2.59
2024-12-08 07:54:02,251 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=64.9 pTM=0.326 ipTM=0.82 tol=3.34
2024-12-08 07:54:32,595 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=65 pTM=0.323 ipTM=0.822 tol=2.24
2024-12-08 07:55:02,927 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=64.9 pTM=0.327 ipTM=0.823 tol=2.9
2024-12-08 07:55:33,270 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=64.7 pTM=0.325 ipTM=0.816 tol=4.72
2024-12-08 07:56:03,620 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=64.6 pTM=0.32 ipTM=0.812 tol=9.2
2024-12-08 07:56:33,922 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=64.9 pTM=0.322 ipTM=0.817 tol=5.43
2024-12-08 07:57:04,251 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=64.9 pTM=0.323 ipTM=0.819 tol=3.72
2024-12-08 07:57:34,572 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=65.1 pTM=0.321 ipTM=0.821 tol=2.67
2024-12-08 07:58:04,894 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=65.1 pTM=0.323 ipTM=0.818 tol=3.95
2024-12-08 07:58:04,895 alphafold2_multimer_v3_model_1_seed_000 took 1091.3s (30 recycles)
2024-12-08 07:58:36,060 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=61.5 pTM=0.259 ipTM=0.131
2024-12-08 07:59:06,385 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=62.6 pTM=0.289 ipTM=0.706 tol=34
2024-12-08 07:59:36,702 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=62.8 pTM=0.308 ipTM=0.765 tol=11.4
2024-12-08 08:00:06,998 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=62.5 pTM=0.319 ipTM=0.799 tol=7.51
2024-12-08 08:00:37,281 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=62.4 pTM=0.321 ipTM=0.81 tol=5.08
2024-12-08 08:01:07,584 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=62.2 pTM=0.318 ipTM=0.798 tol=4.38
2024-12-08 08:01:37,876 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=62.5 pTM=0.319 ipTM=0.807 tol=5.93
2024-12-08 08:02:08,213 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=62.4 pTM=0.318 ipTM=0.808 tol=6.58
2024-12-08 08:02:38,556 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=62.6 pTM=0.316 ipTM=0.804 tol=3.54
2024-12-08 08:03:08,916 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=62.3 pTM=0.315 ipTM=0.795 tol=3.65
2024-12-08 08:03:39,296 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=62.3 pTM=0.316 ipTM=0.8 tol=4.12
2024-12-08 08:04:09,667 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=61.5 pTM=0.319 ipTM=0.815 tol=5.36
2024-12-08 08:04:40,054 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=61.8 pTM=0.319 ipTM=0.817 tol=4.16
2024-12-08 08:05:10,406 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=62 pTM=0.318 ipTM=0.82 tol=5
2024-12-08 08:05:40,778 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=61.4 pTM=0.315 ipTM=0.817 tol=3.45
2024-12-08 08:06:11,149 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=62.1 pTM=0.318 ipTM=0.816 tol=4.5
2024-12-08 08:06:41,553 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=60.8 pTM=0.319 ipTM=0.82 tol=7.27
2024-12-08 08:07:11,898 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=62.1 pTM=0.32 ipTM=0.82 tol=6.91
2024-12-08 08:07:42,208 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=61.6 pTM=0.314 ipTM=0.811 tol=6.94
2024-12-08 08:08:12,528 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=59 pTM=0.314 ipTM=0.814 tol=13.1
2024-12-08 08:08:42,862 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=60.4 pTM=0.313 ipTM=0.803 tol=12.4
2024-12-08 08:09:13,164 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=58.5 pTM=0.318 ipTM=0.81 tol=11.2
2024-12-08 08:09:43,479 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=61 pTM=0.319 ipTM=0.806 tol=9.37
2024-12-08 08:10:13,809 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=58.8 pTM=0.318 ipTM=0.804 tol=8.8
2024-12-08 08:10:44,172 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=61.2 pTM=0.321 ipTM=0.812 tol=10.9
2024-12-08 08:11:14,526 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=58.6 pTM=0.321 ipTM=0.809 tol=11.1
2024-12-08 08:11:44,905 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=60.6 pTM=0.32 ipTM=0.813 tol=10
2024-12-08 08:12:15,288 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=58.4 pTM=0.322 ipTM=0.821 tol=13.7
2024-12-08 08:12:45,671 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=60.4 pTM=0.32 ipTM=0.817 tol=10.7
2024-12-08 08:13:16,055 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=58.7 pTM=0.321 ipTM=0.822 tol=10.4
2024-12-08 08:13:46,429 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=60.6 pTM=0.317 ipTM=0.803 tol=13.5
2024-12-08 08:13:46,430 alphafold2_multimer_v3_model_2_seed_000 took 940.8s (30 recycles)
2024-12-08 08:14:17,679 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=62.8 pTM=0.262 ipTM=0.243
2024-12-08 08:14:48,194 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=64.2 pTM=0.268 ipTM=0.262 tol=17
2024-12-08 08:15:18,703 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=66.2 pTM=0.3 ipTM=0.722 tol=22.2
2024-12-08 08:15:49,020 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=66.5 pTM=0.333 ipTM=0.748 tol=32
2024-12-08 08:16:19,388 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=65.1 pTM=0.31 ipTM=0.723 tol=11.9
2024-12-08 08:16:49,827 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=64.8 pTM=0.309 ipTM=0.717 tol=8.7
2024-12-08 08:17:20,208 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=65.4 pTM=0.315 ipTM=0.748 tol=7.35
2024-12-08 08:17:50,640 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=66.1 pTM=0.314 ipTM=0.749 tol=12.8
2024-12-08 08:18:21,042 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=66.3 pTM=0.316 ipTM=0.764 tol=8.38
2024-12-08 08:18:51,495 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=66.4 pTM=0.317 ipTM=0.757 tol=10.5
2024-12-08 08:19:21,877 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=66.9 pTM=0.32 ipTM=0.769 tol=11.4
2024-12-08 08:19:52,277 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=66.9 pTM=0.32 ipTM=0.766 tol=9.55
2024-12-08 08:20:22,678 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=66.3 pTM=0.325 ipTM=0.781 tol=9.5
2024-12-08 08:20:53,091 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=66.2 pTM=0.325 ipTM=0.777 tol=7.28
2024-12-08 08:21:23,544 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=66.2 pTM=0.326 ipTM=0.781 tol=6.55
2024-12-08 08:21:53,968 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=64.9 pTM=0.324 ipTM=0.77 tol=15.9
2024-12-08 08:22:24,345 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=64.8 pTM=0.328 ipTM=0.773 tol=12.8
2024-12-08 08:22:54,666 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=64.4 pTM=0.333 ipTM=0.769 tol=10.9
2024-12-08 08:23:24,923 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=61.4 pTM=0.328 ipTM=0.765 tol=31.2
2024-12-08 08:23:55,260 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=62 pTM=0.326 ipTM=0.771 tol=22.2
2024-12-08 08:24:25,561 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=64.8 pTM=0.325 ipTM=0.772 tol=14.4
2024-12-08 08:24:55,858 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=63.6 pTM=0.328 ipTM=0.781 tol=28
2024-12-08 08:25:26,135 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=64.2 pTM=0.328 ipTM=0.765 tol=18.7
2024-12-08 08:25:56,425 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=64.4 pTM=0.329 ipTM=0.768 tol=11.5
2024-12-08 08:26:26,753 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=64.2 pTM=0.326 ipTM=0.754 tol=7.55
2024-12-08 08:26:57,078 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=64.3 pTM=0.33 ipTM=0.762 tol=5.92
2024-12-08 08:27:27,373 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=64.3 pTM=0.332 ipTM=0.766 tol=11
2024-12-08 08:27:57,652 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=63.7 pTM=0.332 ipTM=0.764 tol=11.6
2024-12-08 08:28:27,922 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=64.3 pTM=0.339 ipTM=0.772 tol=9.27
2024-12-08 08:28:58,191 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=64.8 pTM=0.344 ipTM=0.769 tol=8.66
2024-12-08 08:29:28,456 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=64.4 pTM=0.347 ipTM=0.772 tol=14.9
2024-12-08 08:29:28,457 alphafold2_multimer_v3_model_3_seed_000 took 941.2s (30 recycles)
2024-12-08 08:29:59,765 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=58.2 pTM=0.23 ipTM=0.18
2024-12-08 08:30:30,297 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=58.5 pTM=0.249 ipTM=0.268 tol=28.4
2024-12-08 08:31:00,763 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=58.8 pTM=0.292 ipTM=0.771 tol=31.2
2024-12-08 08:31:31,226 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=59.2 pTM=0.317 ipTM=0.837 tol=12.7
2024-12-08 08:32:01,700 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=59.5 pTM=0.325 ipTM=0.833 tol=11
2024-12-08 08:32:32,221 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=57.7 pTM=0.322 ipTM=0.829 tol=23.8
2024-12-08 08:33:02,726 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=57.9 pTM=0.322 ipTM=0.83 tol=16.3
2024-12-08 08:33:33,206 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=57.9 pTM=0.321 ipTM=0.833 tol=9.84
2024-12-08 08:34:03,634 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=58.4 pTM=0.326 ipTM=0.838 tol=9.94
2024-12-08 08:34:34,072 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=58.3 pTM=0.324 ipTM=0.832 tol=6.44
2024-12-08 08:35:04,468 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=58.3 pTM=0.325 ipTM=0.838 tol=9.59
2024-12-08 08:35:34,851 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=58.3 pTM=0.323 ipTM=0.834 tol=4.65
2024-12-08 08:36:05,255 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=57.8 pTM=0.327 ipTM=0.844 tol=7.87
2024-12-08 08:36:35,677 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=57.6 pTM=0.324 ipTM=0.839 tol=6.25
2024-12-08 08:37:06,110 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=58.1 pTM=0.324 ipTM=0.838 tol=3.74
2024-12-08 08:37:36,561 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=58 pTM=0.323 ipTM=0.833 tol=7.51
2024-12-08 08:38:07,063 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=58.2 pTM=0.327 ipTM=0.841 tol=9.31
2024-12-08 08:38:37,587 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=57.4 pTM=0.326 ipTM=0.845 tol=8.4
2024-12-08 08:39:08,084 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=58 pTM=0.324 ipTM=0.836 tol=9.14
2024-12-08 08:39:38,571 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=58.4 pTM=0.323 ipTM=0.838 tol=9.75
2024-12-08 08:40:09,038 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=58.3 pTM=0.324 ipTM=0.839 tol=6.43
2024-12-08 08:40:39,514 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=57.8 pTM=0.323 ipTM=0.835 tol=5.76
2024-12-08 08:41:09,989 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=58.3 pTM=0.325 ipTM=0.843 tol=10.8
2024-12-08 08:41:40,477 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=58.7 pTM=0.324 ipTM=0.845 tol=4.23
2024-12-08 08:42:10,994 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=58.4 pTM=0.325 ipTM=0.839 tol=6.77
2024-12-08 08:42:41,481 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=58.6 pTM=0.324 ipTM=0.838 tol=4.65
2024-12-08 08:43:11,983 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=58.2 pTM=0.324 ipTM=0.835 tol=4.61
2024-12-08 08:43:42,469 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=58.5 pTM=0.325 ipTM=0.844 tol=4.68
2024-12-08 08:44:12,907 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=58.6 pTM=0.327 ipTM=0.844 tol=5.79
2024-12-08 08:44:43,337 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=58.8 pTM=0.324 ipTM=0.841 tol=4.9
2024-12-08 08:45:13,781 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=58.4 pTM=0.325 ipTM=0.845 tol=9.5
2024-12-08 08:45:13,782 alphafold2_multimer_v3_model_4_seed_000 took 944.5s (30 recycles)
2024-12-08 08:45:45,062 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=62.8 pTM=0.258 ipTM=0.137
2024-12-08 08:46:15,499 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=62.6 pTM=0.269 ipTM=0.566 tol=17.1
2024-12-08 08:46:45,949 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=62.7 pTM=0.3 ipTM=0.72 tol=17.3
2024-12-08 08:47:16,400 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=63.3 pTM=0.306 ipTM=0.742 tol=16.1
2024-12-08 08:47:46,858 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=63.4 pTM=0.31 ipTM=0.747 tol=7.85
2024-12-08 08:48:17,332 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=63.7 pTM=0.314 ipTM=0.752 tol=15.6
2024-12-08 08:48:47,792 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=64.5 pTM=0.313 ipTM=0.743 tol=8.52
2024-12-08 08:49:18,248 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=64.3 pTM=0.308 ipTM=0.727 tol=2.91
2024-12-08 08:49:48,702 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=64.4 pTM=0.311 ipTM=0.746 tol=2.71
2024-12-08 08:50:19,149 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=64.1 pTM=0.309 ipTM=0.73 tol=2.64
2024-12-08 08:50:49,545 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=64.2 pTM=0.312 ipTM=0.736 tol=5.33
2024-12-08 08:51:19,919 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=63.5 pTM=0.313 ipTM=0.745 tol=3.49
2024-12-08 08:51:50,314 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=64 pTM=0.316 ipTM=0.759 tol=2.72
2024-12-08 08:52:20,706 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=63.9 pTM=0.312 ipTM=0.75 tol=3.06
2024-12-08 08:52:51,103 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=63.9 pTM=0.312 ipTM=0.757 tol=2.71
2024-12-08 08:53:21,476 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=64.4 pTM=0.311 ipTM=0.746 tol=3.81
2024-12-08 08:53:51,909 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=64.1 pTM=0.314 ipTM=0.762 tol=4.52
2024-12-08 08:54:22,283 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=64.2 pTM=0.314 ipTM=0.765 tol=3.44
2024-12-08 08:54:52,677 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=64.8 pTM=0.314 ipTM=0.765 tol=6.43
2024-12-08 08:55:23,085 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=64.3 pTM=0.314 ipTM=0.763 tol=3.78
2024-12-08 08:55:53,483 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=64.8 pTM=0.318 ipTM=0.772 tol=2.94
2024-12-08 08:56:23,889 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=64.1 pTM=0.317 ipTM=0.775 tol=3.83
2024-12-08 08:56:54,284 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=64.6 pTM=0.319 ipTM=0.765 tol=4.29
2024-12-08 08:57:24,664 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=64.8 pTM=0.316 ipTM=0.762 tol=2.69
2024-12-08 08:57:55,030 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=64.8 pTM=0.32 ipTM=0.77 tol=3.7
2024-12-08 08:58:25,392 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=64.5 pTM=0.319 ipTM=0.767 tol=3.77
2024-12-08 08:58:55,739 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=64.3 pTM=0.318 ipTM=0.768 tol=4.18
2024-12-08 08:59:26,085 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=64.2 pTM=0.317 ipTM=0.774 tol=2.81
2024-12-08 08:59:56,441 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=64 pTM=0.315 ipTM=0.766 tol=3.49
2024-12-08 09:00:26,781 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=64.4 pTM=0.316 ipTM=0.764 tol=5.88
2024-12-08 09:00:57,143 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=63.6 pTM=0.32 ipTM=0.772 tol=5.04
2024-12-08 09:00:57,144 alphafold2_multimer_v3_model_5_seed_000 took 942.6s (30 recycles)
2024-12-08 09:00:57,924 reranking models by 'multimer' metric
2024-12-08 09:01:01,284 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-08 09:02:21,594 Relaxation took 83.7s
2024-12-08 09:02:21,594 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=58.4 pTM=0.325 ipTM=0.845
2024-12-08 09:03:44,639 Relaxation took 83.0s
2024-12-08 09:03:44,639 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=65.1 pTM=0.323 ipTM=0.818
2024-12-08 09:05:09,723 Relaxation took 85.1s
2024-12-08 09:05:09,723 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=60.6 pTM=0.317 ipTM=0.803
2024-12-08 09:07:17,647 Relaxation took 127.9s
2024-12-08 09:07:17,648 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=64.4 pTM=0.347 ipTM=0.772
2024-12-08 09:08:13,393 Relaxation took 55.7s
2024-12-08 09:08:13,393 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=63.6 pTM=0.32 ipTM=0.772
2024-12-08 09:08:15,593 Done