2024-12-08 07:37:03,229 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-08 07:37:03,577 Running on GPU
2024-12-08 07:37:04,832 Found 6 citations for tools or databases
2024-12-08 07:37:04,832 Query 1/1: RNF20_USP15 (length 1956)
2024-12-08 07:37:05,113 Sleeping for 9s. Reason: PENDING
2024-12-08 07:37:14,374 Sleeping for 6s. Reason: RUNNING
2024-12-08 07:37:20,629 Sleeping for 9s. Reason: RUNNING
2024-12-08 07:37:29,891 Sleeping for 5s. Reason: RUNNING
2024-12-08 07:37:35,145 Sleeping for 8s. Reason: RUNNING
2024-12-08 07:37:43,403 Sleeping for 7s. Reason: RUNNING
2024-12-08 07:37:50,659 Sleeping for 5s. Reason: RUNNING
2024-12-08 07:37:55,912 Sleeping for 6s. Reason: RUNNING
2024-12-08 07:38:02,168 Sleeping for 7s. Reason: RUNNING
2024-12-08 07:38:09,428 Sleeping for 6s. Reason: RUNNING
2024-12-08 07:38:15,692 Sleeping for 6s. Reason: RUNNING
2024-12-08 07:38:21,957 Sleeping for 8s. Reason: RUNNING
2024-12-08 07:38:30,215 Sleeping for 10s. Reason: RUNNING
2024-12-08 07:38:40,484 Sleeping for 9s. Reason: RUNNING
2024-12-08 07:38:49,746 Sleeping for 10s. Reason: RUNNING
2024-12-08 07:39:00,009 Sleeping for 6s. Reason: RUNNING
2024-12-08 07:39:06,262 Sleeping for 7s. Reason: RUNNING
2024-12-08 07:39:13,522 Sleeping for 9s. Reason: RUNNING
2024-12-08 07:39:22,791 Sleeping for 8s. Reason: RUNNING
2024-12-08 07:39:31,050 Sleeping for 9s. Reason: RUNNING
2024-12-08 07:39:40,313 Sleeping for 8s. Reason: RUNNING
2024-12-08 07:39:48,572 Sleeping for 10s. Reason: RUNNING
2024-12-08 07:39:58,836 Sleeping for 5s. Reason: RUNNING
2024-12-08 07:40:04,097 Sleeping for 8s. Reason: RUNNING
2024-12-08 07:40:12,361 Sleeping for 8s. Reason: RUNNING
2024-12-08 07:40:20,625 Sleeping for 9s. Reason: RUNNING
2024-12-08 07:40:29,890 Sleeping for 7s. Reason: RUNNING
2024-12-08 07:40:37,150 Sleeping for 9s. Reason: RUNNING
2024-12-08 07:40:46,412 Sleeping for 10s. Reason: RUNNING
2024-12-08 07:40:56,680 Sleeping for 8s. Reason: RUNNING
2024-12-08 07:41:04,944 Sleeping for 8s. Reason: RUNNING
2024-12-08 07:41:13,201 Sleeping for 9s. Reason: RUNNING
2024-12-08 07:41:22,462 Sleeping for 10s. Reason: RUNNING
2024-12-08 07:41:32,725 Sleeping for 10s. Reason: RUNNING
2024-12-08 07:41:42,990 Sleeping for 8s. Reason: RUNNING
2024-12-08 07:41:51,251 Sleeping for 5s. Reason: RUNNING
2024-12-08 07:41:56,514 Sleeping for 10s. Reason: RUNNING
2024-12-08 07:42:08,964 Sleeping for 7s. Reason: PENDING
2024-12-08 07:42:16,229 Sleeping for 7s. Reason: RUNNING
2024-12-08 07:42:23,489 Sleeping for 8s. Reason: RUNNING
2024-12-08 07:42:31,755 Sleeping for 5s. Reason: RUNNING
2024-12-08 07:42:37,007 Sleeping for 6s. Reason: RUNNING
2024-12-08 07:42:43,260 Sleeping for 10s. Reason: RUNNING
2024-12-08 07:42:53,516 Sleeping for 6s. Reason: RUNNING
2024-12-08 07:42:59,773 Sleeping for 10s. Reason: RUNNING
2024-12-08 07:43:10,032 Sleeping for 8s. Reason: RUNNING
2024-12-08 07:43:18,292 Sleeping for 7s. Reason: RUNNING
2024-12-08 07:43:25,556 Sleeping for 10s. Reason: RUNNING
2024-12-08 07:43:35,819 Sleeping for 5s. Reason: RUNNING
2024-12-08 07:43:41,075 Sleeping for 10s. Reason: RUNNING
2024-12-08 07:43:51,334 Sleeping for 7s. Reason: RUNNING
2024-12-08 07:43:58,594 Sleeping for 10s. Reason: RUNNING
2024-12-08 07:44:08,857 Sleeping for 10s. Reason: RUNNING
2024-12-08 07:44:28,507 Setting max_seq=508, max_extra_seq=2048
2024-12-08 07:49:18,862 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=57.4 pTM=0.354 ipTM=0.291
2024-12-08 07:51:14,789 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=56.3 pTM=0.348 ipTM=0.229 tol=12.4
2024-12-08 07:53:10,833 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=56.3 pTM=0.351 ipTM=0.215 tol=9.1
2024-12-08 07:55:06,911 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=56.7 pTM=0.354 ipTM=0.24 tol=9
2024-12-08 07:57:02,917 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=56.5 pTM=0.355 ipTM=0.239 tol=6.2
2024-12-08 07:58:58,991 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=57.1 pTM=0.355 ipTM=0.231 tol=4.46
2024-12-08 08:00:55,087 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=56.8 pTM=0.358 ipTM=0.241 tol=3.53
2024-12-08 08:02:51,226 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=56.8 pTM=0.356 ipTM=0.254 tol=3.13
2024-12-08 08:04:47,336 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=57.3 pTM=0.357 ipTM=0.26 tol=3.07
2024-12-08 08:06:43,424 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=56.7 pTM=0.358 ipTM=0.26 tol=3.24
2024-12-08 08:08:39,484 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=57 pTM=0.36 ipTM=0.268 tol=3.34
2024-12-08 08:10:35,559 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=57 pTM=0.361 ipTM=0.273 tol=3.93
2024-12-08 08:12:31,605 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=57.5 pTM=0.36 ipTM=0.28 tol=3.44
2024-12-08 08:14:27,626 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=57.2 pTM=0.357 ipTM=0.281 tol=3.84
2024-12-08 08:16:23,616 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=57.4 pTM=0.361 ipTM=0.29 tol=2.77
2024-12-08 08:18:19,566 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=57.3 pTM=0.362 ipTM=0.28 tol=2.87
2024-12-08 08:20:15,499 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=56.9 pTM=0.363 ipTM=0.259 tol=3.6
2024-12-08 08:22:11,461 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=56.9 pTM=0.364 ipTM=0.251 tol=3.29
2024-12-08 08:24:07,344 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=57.2 pTM=0.365 ipTM=0.273 tol=2.57
2024-12-08 08:26:03,254 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=57.5 pTM=0.367 ipTM=0.281 tol=2.72
2024-12-08 08:27:59,175 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=57.6 pTM=0.365 ipTM=0.279 tol=2.51
2024-12-08 08:29:55,027 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=57.3 pTM=0.364 ipTM=0.273 tol=1.86
2024-12-08 08:31:50,840 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=57.4 pTM=0.364 ipTM=0.274 tol=1.99
2024-12-08 08:33:46,685 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=57.3 pTM=0.365 ipTM=0.274 tol=2.13
2024-12-08 08:35:42,560 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=57.1 pTM=0.367 ipTM=0.269 tol=4.16
2024-12-08 08:37:38,426 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=57.4 pTM=0.37 ipTM=0.298 tol=6.22
2024-12-08 08:39:34,321 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=57.3 pTM=0.367 ipTM=0.271 tol=3.95
2024-12-08 08:41:30,193 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=57.1 pTM=0.365 ipTM=0.271 tol=3.54
2024-12-08 08:43:26,042 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=57.6 pTM=0.367 ipTM=0.278 tol=3.41
2024-12-08 08:45:21,926 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=57.4 pTM=0.365 ipTM=0.274 tol=2.98
2024-12-08 08:47:17,831 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=56.9 pTM=0.365 ipTM=0.259 tol=4.22
2024-12-08 08:47:17,833 alphafold2_multimer_v3_model_1_seed_000 took 3762.8s (30 recycles)
2024-12-08 08:49:17,030 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=58.1 pTM=0.353 ipTM=0.193
2024-12-08 08:51:13,106 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=57.4 pTM=0.355 ipTM=0.217 tol=21.4
2024-12-08 08:53:09,201 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=57.9 pTM=0.362 ipTM=0.268 tol=8.7
2024-12-08 08:55:05,376 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=57.4 pTM=0.365 ipTM=0.263 tol=7.06
2024-12-08 08:57:01,605 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=57.8 pTM=0.365 ipTM=0.26 tol=6.34
2024-12-08 08:58:57,805 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=57.5 pTM=0.365 ipTM=0.265 tol=4.45
2024-12-08 09:00:54,008 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=57.3 pTM=0.365 ipTM=0.264 tol=4.81
2024-12-08 09:02:50,240 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=57.5 pTM=0.365 ipTM=0.258 tol=4.49
2024-12-08 09:04:46,545 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=57.9 pTM=0.367 ipTM=0.261 tol=3.36
2024-12-08 09:06:42,769 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=57.6 pTM=0.365 ipTM=0.259 tol=4.04
2024-12-08 09:08:38,876 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=57.8 pTM=0.367 ipTM=0.265 tol=3.35
2024-12-08 09:10:35,071 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=57.8 pTM=0.365 ipTM=0.26 tol=4.3
2024-12-08 09:12:31,256 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=58.3 pTM=0.369 ipTM=0.283 tol=4.35
2024-12-08 09:14:27,415 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=57.9 pTM=0.369 ipTM=0.286 tol=4.44
2024-12-08 09:16:23,602 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=58.2 pTM=0.369 ipTM=0.277 tol=4.38
2024-12-08 09:18:19,802 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=58 pTM=0.37 ipTM=0.269 tol=4.21
2024-12-08 09:20:15,976 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=58.2 pTM=0.37 ipTM=0.264 tol=5.29
2024-12-08 09:22:12,166 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=58.1 pTM=0.369 ipTM=0.262 tol=3.55
2024-12-08 09:24:08,395 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=58.3 pTM=0.369 ipTM=0.271 tol=3.41
2024-12-08 09:26:04,545 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=58.1 pTM=0.368 ipTM=0.263 tol=3.6
2024-12-08 09:28:00,727 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=58.6 pTM=0.371 ipTM=0.277 tol=4.26
2024-12-08 09:29:56,857 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=58.3 pTM=0.372 ipTM=0.302 tol=4.73
2024-12-08 09:31:53,019 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=58.6 pTM=0.373 ipTM=0.32 tol=3.41
2024-12-08 09:33:49,176 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=58.5 pTM=0.373 ipTM=0.329 tol=3.82
2024-12-08 09:35:45,368 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=59 pTM=0.375 ipTM=0.329 tol=3.86
2024-12-08 09:37:41,580 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=58.5 pTM=0.376 ipTM=0.333 tol=4.23
2024-12-08 09:39:37,743 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=59 pTM=0.375 ipTM=0.331 tol=4.5
2024-12-08 09:41:33,937 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=58.7 pTM=0.375 ipTM=0.333 tol=3.62
2024-12-08 09:43:30,082 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=58.8 pTM=0.375 ipTM=0.332 tol=4.46
2024-12-08 09:45:26,232 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=58.4 pTM=0.374 ipTM=0.323 tol=4.34
2024-12-08 09:47:22,353 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=59.1 pTM=0.379 ipTM=0.345 tol=4.34
2024-12-08 09:47:22,355 alphafold2_multimer_v3_model_2_seed_000 took 3601.6s (30 recycles)
2024-12-08 09:49:21,933 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=60.2 pTM=0.345 ipTM=0.227
2024-12-08 09:51:18,547 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=59.6 pTM=0.347 ipTM=0.207 tol=25
2024-12-08 09:53:14,971 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=58.9 pTM=0.349 ipTM=0.234 tol=8.29
2024-12-08 09:55:11,315 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=58.8 pTM=0.358 ipTM=0.252 tol=9.52
2024-12-08 09:57:07,702 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=59.3 pTM=0.354 ipTM=0.259 tol=5.37
2024-12-08 09:59:04,137 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=59.3 pTM=0.354 ipTM=0.255 tol=4.8
2024-12-08 10:01:00,497 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=59.4 pTM=0.355 ipTM=0.259 tol=5.5
2024-12-08 10:02:56,843 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=59.2 pTM=0.355 ipTM=0.26 tol=3.39
2024-12-08 10:04:53,252 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=59.5 pTM=0.356 ipTM=0.265 tol=3.25
2024-12-08 10:06:49,731 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=59.8 pTM=0.358 ipTM=0.268 tol=4.5
2024-12-08 10:08:46,178 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=59.7 pTM=0.358 ipTM=0.269 tol=3.64
2024-12-08 10:10:42,546 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=59.7 pTM=0.358 ipTM=0.273 tol=3.57
2024-12-08 10:12:38,921 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=59.7 pTM=0.36 ipTM=0.277 tol=2.29
2024-12-08 10:14:35,408 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=59.8 pTM=0.358 ipTM=0.273 tol=2.05
2024-12-08 10:16:31,791 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=60.2 pTM=0.359 ipTM=0.277 tol=3.23
2024-12-08 10:18:28,179 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=59.6 pTM=0.359 ipTM=0.275 tol=2.41
2024-12-08 10:20:24,573 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=59.7 pTM=0.358 ipTM=0.274 tol=1.65
2024-12-08 10:22:20,946 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=59.7 pTM=0.359 ipTM=0.278 tol=3.92
2024-12-08 10:24:17,361 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=59.7 pTM=0.361 ipTM=0.271 tol=3.62
2024-12-08 10:26:13,863 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=59.7 pTM=0.361 ipTM=0.267 tol=3.15
2024-12-08 10:28:10,176 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=60.3 pTM=0.363 ipTM=0.279 tol=3.42
2024-12-08 10:30:06,472 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=60.2 pTM=0.365 ipTM=0.27 tol=2.72
2024-12-08 10:32:02,815 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=60 pTM=0.362 ipTM=0.268 tol=1.99
2024-12-08 10:33:59,125 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=60.2 pTM=0.361 ipTM=0.269 tol=3.45
2024-12-08 10:35:55,450 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=60 pTM=0.361 ipTM=0.268 tol=3.44
2024-12-08 10:37:51,755 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=60.4 pTM=0.362 ipTM=0.274 tol=4.29
2024-12-08 10:39:47,965 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=60.1 pTM=0.362 ipTM=0.283 tol=3.36
2024-12-08 10:41:44,134 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=60.2 pTM=0.36 ipTM=0.277 tol=3.07
2024-12-08 10:43:40,273 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=60.5 pTM=0.361 ipTM=0.28 tol=3.53
2024-12-08 10:45:36,466 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=60.4 pTM=0.363 ipTM=0.28 tol=2.69
2024-12-08 10:47:32,576 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=60.3 pTM=0.363 ipTM=0.276 tol=2.02
2024-12-08 10:47:32,578 alphafold2_multimer_v3_model_3_seed_000 took 3607.4s (30 recycles)
2024-12-08 10:49:32,023 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=54.6 pTM=0.344 ipTM=0.198
2024-12-08 10:51:28,630 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=54.9 pTM=0.347 ipTM=0.196 tol=17.7
2024-12-08 10:53:25,160 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=55.4 pTM=0.356 ipTM=0.197 tol=10.4
2024-12-08 10:55:21,746 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=55.7 pTM=0.36 ipTM=0.196 tol=6.85
2024-12-08 10:57:18,289 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=55.7 pTM=0.362 ipTM=0.205 tol=7.22
2024-12-08 10:59:14,763 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=55.9 pTM=0.361 ipTM=0.203 tol=6.29
2024-12-08 11:01:11,239 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=55.8 pTM=0.363 ipTM=0.199 tol=7.22
2024-12-08 11:03:07,716 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=56.3 pTM=0.365 ipTM=0.206 tol=6.89
2024-12-08 11:05:04,222 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=56.8 pTM=0.366 ipTM=0.238 tol=4.92
2024-12-08 11:07:00,814 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=56.6 pTM=0.365 ipTM=0.252 tol=3.49
2024-12-08 11:08:57,499 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=57 pTM=0.365 ipTM=0.252 tol=5.49
2024-12-08 11:10:54,187 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=56.6 pTM=0.366 ipTM=0.257 tol=3.77
2024-12-08 11:12:50,847 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=56.7 pTM=0.368 ipTM=0.253 tol=3.83
2024-12-08 11:14:47,428 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=57.1 pTM=0.368 ipTM=0.255 tol=4.81
2024-12-08 11:16:44,003 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=56.8 pTM=0.372 ipTM=0.253 tol=5.25
2024-12-08 11:18:40,578 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=56.8 pTM=0.375 ipTM=0.264 tol=3.83
2024-12-08 11:20:37,098 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=56.8 pTM=0.378 ipTM=0.298 tol=4.2
2024-12-08 11:22:33,596 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=56.8 pTM=0.379 ipTM=0.311 tol=4.03
2024-12-08 11:24:30,063 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=57.2 pTM=0.383 ipTM=0.325 tol=2.86
2024-12-08 11:26:26,467 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=57.4 pTM=0.383 ipTM=0.328 tol=3.17
2024-12-08 11:28:22,966 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=57.2 pTM=0.383 ipTM=0.326 tol=3.96
2024-12-08 11:30:19,288 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=57.3 pTM=0.386 ipTM=0.336 tol=3.3
2024-12-08 11:32:15,707 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=57.2 pTM=0.382 ipTM=0.306 tol=4.25
2024-12-08 11:34:12,721 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=57.1 pTM=0.383 ipTM=0.318 tol=3.3
2024-12-08 11:36:09,503 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=57.1 pTM=0.382 ipTM=0.302 tol=2.91
2024-12-08 11:38:06,314 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=57 pTM=0.384 ipTM=0.311 tol=2.97
2024-12-08 11:40:03,019 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=56.8 pTM=0.382 ipTM=0.302 tol=2.44
2024-12-08 11:41:59,681 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=57.1 pTM=0.381 ipTM=0.312 tol=3.24
2024-12-08 11:43:56,367 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=57.1 pTM=0.382 ipTM=0.321 tol=2.75
2024-12-08 11:45:53,109 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=57 pTM=0.384 ipTM=0.324 tol=3.15
2024-12-08 11:47:49,876 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=57 pTM=0.382 ipTM=0.312 tol=2.86
2024-12-08 11:47:49,878 alphafold2_multimer_v3_model_4_seed_000 took 3614.4s (30 recycles)
2024-12-08 11:49:49,471 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=57.7 pTM=0.345 ipTM=0.234
2024-12-08 11:51:46,060 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=58.1 pTM=0.352 ipTM=0.283 tol=19.8
2024-12-08 11:53:42,684 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=57.6 pTM=0.348 ipTM=0.272 tol=10.8
2024-12-08 11:55:39,098 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=58.3 pTM=0.353 ipTM=0.279 tol=6.29
2024-12-08 11:57:35,643 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=58.3 pTM=0.354 ipTM=0.279 tol=6.6
2024-12-08 11:59:32,162 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=58.3 pTM=0.354 ipTM=0.277 tol=4.99
2024-12-08 12:01:28,657 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=58.3 pTM=0.355 ipTM=0.283 tol=5.89
2024-12-08 12:03:25,152 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=58.3 pTM=0.354 ipTM=0.281 tol=5.5
2024-12-08 12:05:21,630 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=59.1 pTM=0.358 ipTM=0.299 tol=5.41
2024-12-08 12:07:17,969 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=58.6 pTM=0.357 ipTM=0.285 tol=4.28
2024-12-08 12:09:14,228 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=58.9 pTM=0.361 ipTM=0.294 tol=4.85
2024-12-08 12:11:10,432 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=58.8 pTM=0.358 ipTM=0.289 tol=3.35
2024-12-08 12:13:06,572 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=58.8 pTM=0.36 ipTM=0.298 tol=2.7
2024-12-08 12:15:02,771 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=58.4 pTM=0.358 ipTM=0.29 tol=2.4
2024-12-08 12:16:58,939 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=58.8 pTM=0.359 ipTM=0.285 tol=3.03
2024-12-08 12:18:55,146 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=58.6 pTM=0.36 ipTM=0.282 tol=2.95
2024-12-08 12:20:51,348 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=59.1 pTM=0.362 ipTM=0.296 tol=2.4
2024-12-08 12:22:47,617 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=58.5 pTM=0.361 ipTM=0.283 tol=2.95
2024-12-08 12:24:43,940 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=58.8 pTM=0.363 ipTM=0.285 tol=2.7
2024-12-08 12:26:40,315 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=59 pTM=0.363 ipTM=0.294 tol=2.87
2024-12-08 12:28:36,588 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=59.5 pTM=0.366 ipTM=0.3 tol=3.27
2024-12-08 12:30:32,761 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=58.7 pTM=0.364 ipTM=0.285 tol=4.73
2024-12-08 12:32:28,875 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=58.8 pTM=0.363 ipTM=0.285 tol=3.44
2024-12-08 12:34:25,029 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=58.8 pTM=0.363 ipTM=0.281 tol=2.03
2024-12-08 12:36:21,167 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=59.7 pTM=0.365 ipTM=0.28 tol=3.61
2024-12-08 12:38:17,382 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=59.2 pTM=0.371 ipTM=0.297 tol=3.31
2024-12-08 12:40:13,593 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=59.2 pTM=0.372 ipTM=0.3 tol=4.54
2024-12-08 12:42:09,895 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=59.5 pTM=0.375 ipTM=0.31 tol=4.34
2024-12-08 12:44:06,215 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=59.2 pTM=0.382 ipTM=0.311 tol=5.57
2024-12-08 12:46:02,593 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=59.3 pTM=0.377 ipTM=0.277 tol=4.87
2024-12-08 12:47:58,956 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=59.2 pTM=0.37 ipTM=0.279 tol=5.6
2024-12-08 12:47:58,958 alphafold2_multimer_v3_model_5_seed_000 took 3606.2s (30 recycles)
2024-12-08 12:48:01,798 reranking models by 'multimer' metric
2024-12-08 12:48:04,038 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-08 12:55:37,774 Relaxation took 456.0s
2024-12-08 12:55:37,774 rank_001_alphafold2_multimer_v3_model_2_seed_000 pLDDT=59.1 pTM=0.379 ipTM=0.345
2024-12-08 13:00:52,457 Relaxation took 314.7s
2024-12-08 13:00:52,457 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=57 pTM=0.382 ipTM=0.312
2024-12-08 13:07:23,128 Relaxation took 390.7s
2024-12-08 13:07:23,129 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=59.2 pTM=0.37 ipTM=0.279
2024-12-08 13:12:40,941 Relaxation took 317.8s
2024-12-08 13:12:40,942 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=60.3 pTM=0.363 ipTM=0.276
2024-12-08 13:19:54,809 Relaxation took 433.9s
2024-12-08 13:19:54,809 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=56.9 pTM=0.365 ipTM=0.259
2024-12-08 13:20:00,659 Done