2024-12-08 08:03:46,298 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-08 08:03:46,625 Running on GPU
2024-12-08 08:03:49,529 Found 6 citations for tools or databases
2024-12-08 08:03:49,530 Query 1/1: RNF25_SERPINB4 (length 849)
2024-12-08 08:03:49,812 Sleeping for 6s. Reason: PENDING
2024-12-08 08:03:56,074 Sleeping for 10s. Reason: RUNNING
2024-12-08 08:04:06,336 Sleeping for 10s. Reason: RUNNING
2024-12-08 08:04:16,600 Sleeping for 7s. Reason: RUNNING
2024-12-08 08:04:23,866 Sleeping for 6s. Reason: RUNNING
2024-12-08 08:04:30,128 Sleeping for 6s. Reason: RUNNING
2024-12-08 08:04:36,381 Sleeping for 9s. Reason: RUNNING
2024-12-08 08:04:45,638 Sleeping for 6s. Reason: RUNNING
2024-12-08 08:04:51,893 Sleeping for 7s. Reason: RUNNING
2024-12-08 08:04:59,155 Sleeping for 10s. Reason: RUNNING
2024-12-08 08:05:09,416 Sleeping for 10s. Reason: RUNNING
2024-12-08 08:05:19,670 Sleeping for 8s. Reason: RUNNING
2024-12-08 08:05:30,828 Sleeping for 6s. Reason: PENDING
2024-12-08 08:05:37,090 Sleeping for 5s. Reason: RUNNING
2024-12-08 08:05:42,347 Sleeping for 9s. Reason: RUNNING
2024-12-08 08:05:51,610 Sleeping for 5s. Reason: RUNNING
2024-12-08 08:05:56,862 Sleeping for 9s. Reason: RUNNING
2024-12-08 08:06:06,127 Sleeping for 7s. Reason: RUNNING
2024-12-08 08:06:13,385 Sleeping for 6s. Reason: RUNNING
2024-12-08 08:06:19,640 Sleeping for 8s. Reason: RUNNING
2024-12-08 08:06:27,904 Sleeping for 6s. Reason: RUNNING
2024-12-08 08:06:37,601 Setting max_seq=508, max_extra_seq=2048
2024-12-08 08:09:39,093 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=60.1 pTM=0.457 ipTM=0.131
2024-12-08 08:09:53,937 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=61.6 pTM=0.466 ipTM=0.135 tol=12.2
2024-12-08 08:10:08,830 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=61.2 pTM=0.463 ipTM=0.135 tol=6.96
2024-12-08 08:10:23,757 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=61.2 pTM=0.461 ipTM=0.137 tol=3.41
2024-12-08 08:10:38,727 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=61.7 pTM=0.463 ipTM=0.135 tol=2.39
2024-12-08 08:10:53,725 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=61.9 pTM=0.467 ipTM=0.134 tol=3.73
2024-12-08 08:11:08,743 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=61.7 pTM=0.464 ipTM=0.136 tol=2.08
2024-12-08 08:11:23,785 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=61.8 pTM=0.467 ipTM=0.136 tol=2.15
2024-12-08 08:11:38,835 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=61.4 pTM=0.465 ipTM=0.136 tol=2.53
2024-12-08 08:11:53,889 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=61.1 pTM=0.462 ipTM=0.138 tol=2.23
2024-12-08 08:12:08,961 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=61.3 pTM=0.463 ipTM=0.135 tol=3.9
2024-12-08 08:12:24,044 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=61.5 pTM=0.464 ipTM=0.136 tol=4.14
2024-12-08 08:12:39,137 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=61.6 pTM=0.466 ipTM=0.138 tol=5.51
2024-12-08 08:12:54,215 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=61.4 pTM=0.464 ipTM=0.137 tol=2.66
2024-12-08 08:13:09,303 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=61.2 pTM=0.464 ipTM=0.137 tol=4.54
2024-12-08 08:13:24,396 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=62.1 pTM=0.466 ipTM=0.14 tol=1.83
2024-12-08 08:13:39,487 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=61.6 pTM=0.464 ipTM=0.138 tol=2.05
2024-12-08 08:13:54,579 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=61.3 pTM=0.464 ipTM=0.14 tol=5.54
2024-12-08 08:14:09,667 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=61.1 pTM=0.463 ipTM=0.14 tol=2.2
2024-12-08 08:14:24,767 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=62 pTM=0.469 ipTM=0.142 tol=5.27
2024-12-08 08:14:39,866 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=61.3 pTM=0.466 ipTM=0.139 tol=8.24
2024-12-08 08:14:54,955 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=61.3 pTM=0.466 ipTM=0.14 tol=6.91
2024-12-08 08:15:10,052 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=60.9 pTM=0.463 ipTM=0.14 tol=4.44
2024-12-08 08:15:25,150 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=61.4 pTM=0.466 ipTM=0.141 tol=3.85
2024-12-08 08:15:40,243 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=61.2 pTM=0.464 ipTM=0.139 tol=3.45
2024-12-08 08:15:55,339 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=61.1 pTM=0.464 ipTM=0.141 tol=1.75
2024-12-08 08:16:10,447 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=61.3 pTM=0.465 ipTM=0.14 tol=3.81
2024-12-08 08:16:25,533 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=61.3 pTM=0.463 ipTM=0.143 tol=5.31
2024-12-08 08:16:40,623 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=61 pTM=0.461 ipTM=0.141 tol=3.31
2024-12-08 08:16:55,722 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=60.9 pTM=0.462 ipTM=0.14 tol=9.26
2024-12-08 08:17:10,818 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=61.3 pTM=0.464 ipTM=0.139 tol=6.98
2024-12-08 08:17:10,819 alphafold2_multimer_v3_model_1_seed_000 took 628.1s (30 recycles)
2024-12-08 08:17:26,329 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=60.8 pTM=0.451 ipTM=0.141
2024-12-08 08:17:41,409 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=61.7 pTM=0.454 ipTM=0.149 tol=10.4
2024-12-08 08:17:56,498 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=62 pTM=0.454 ipTM=0.141 tol=5.76
2024-12-08 08:18:11,598 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=62.2 pTM=0.452 ipTM=0.142 tol=3.16
2024-12-08 08:18:26,704 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=62.8 pTM=0.455 ipTM=0.142 tol=2.59
2024-12-08 08:18:41,808 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=62.7 pTM=0.453 ipTM=0.143 tol=1.69
2024-12-08 08:18:56,915 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=62.4 pTM=0.451 ipTM=0.143 tol=1.61
2024-12-08 08:19:12,014 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=62.7 pTM=0.455 ipTM=0.141 tol=1.83
2024-12-08 08:19:27,119 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=62.9 pTM=0.457 ipTM=0.141 tol=2.71
2024-12-08 08:19:42,212 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=62.5 pTM=0.453 ipTM=0.145 tol=2.89
2024-12-08 08:19:57,303 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=62.7 pTM=0.454 ipTM=0.141 tol=1.56
2024-12-08 08:20:12,394 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=63 pTM=0.456 ipTM=0.139 tol=2.2
2024-12-08 08:20:27,476 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=62.8 pTM=0.457 ipTM=0.142 tol=1.88
2024-12-08 08:20:42,566 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=62.9 pTM=0.456 ipTM=0.141 tol=1.77
2024-12-08 08:20:57,652 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=62.8 pTM=0.457 ipTM=0.142 tol=2.53
2024-12-08 08:21:12,737 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=63.1 pTM=0.457 ipTM=0.145 tol=2.33
2024-12-08 08:21:27,820 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=63.1 pTM=0.457 ipTM=0.143 tol=1.63
2024-12-08 08:21:42,899 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=62.7 pTM=0.455 ipTM=0.14 tol=1.94
2024-12-08 08:21:57,982 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=62.6 pTM=0.454 ipTM=0.142 tol=1.77
2024-12-08 08:22:13,059 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=63 pTM=0.456 ipTM=0.145 tol=1.87
2024-12-08 08:22:28,136 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=62.7 pTM=0.455 ipTM=0.143 tol=3.79
2024-12-08 08:22:43,210 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=62.8 pTM=0.455 ipTM=0.143 tol=1.08
2024-12-08 08:22:58,279 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=62.6 pTM=0.454 ipTM=0.143 tol=2.58
2024-12-08 08:23:13,359 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=62.7 pTM=0.455 ipTM=0.141 tol=1.3
2024-12-08 08:23:28,438 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=62.7 pTM=0.454 ipTM=0.14 tol=1.82
2024-12-08 08:23:43,508 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=62.3 pTM=0.452 ipTM=0.141 tol=1.28
2024-12-08 08:23:58,588 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=62.7 pTM=0.456 ipTM=0.143 tol=2.28
2024-12-08 08:24:13,666 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=62.7 pTM=0.454 ipTM=0.145 tol=3.07
2024-12-08 08:24:28,745 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=62.4 pTM=0.452 ipTM=0.141 tol=1.86
2024-12-08 08:24:43,827 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=62.4 pTM=0.453 ipTM=0.138 tol=3.08
2024-12-08 08:24:58,906 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=62.6 pTM=0.452 ipTM=0.138 tol=1.46
2024-12-08 08:24:58,907 alphafold2_multimer_v3_model_2_seed_000 took 467.6s (30 recycles)
2024-12-08 08:25:14,420 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=59.8 pTM=0.451 ipTM=0.14
2024-12-08 08:25:29,513 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=61.8 pTM=0.46 ipTM=0.135 tol=8.05
2024-12-08 08:25:44,608 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=60.7 pTM=0.448 ipTM=0.128 tol=8.42
2024-12-08 08:25:59,700 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=61 pTM=0.452 ipTM=0.132 tol=5.17
2024-12-08 08:26:14,797 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=61.1 pTM=0.451 ipTM=0.131 tol=5.71
2024-12-08 08:26:29,913 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=61.2 pTM=0.451 ipTM=0.138 tol=6.04
2024-12-08 08:26:45,021 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=61.2 pTM=0.452 ipTM=0.137 tol=4.79
2024-12-08 08:27:00,130 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=61.4 pTM=0.453 ipTM=0.142 tol=3.13
2024-12-08 08:27:15,251 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=61.6 pTM=0.453 ipTM=0.143 tol=4.48
2024-12-08 08:27:30,351 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=61.2 pTM=0.453 ipTM=0.144 tol=3.08
2024-12-08 08:27:45,452 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=61.3 pTM=0.451 ipTM=0.144 tol=1.84
2024-12-08 08:28:00,558 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=61.9 pTM=0.455 ipTM=0.146 tol=3.6
2024-12-08 08:28:15,671 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=61.4 pTM=0.453 ipTM=0.145 tol=2.19
2024-12-08 08:28:30,789 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=61.6 pTM=0.453 ipTM=0.146 tol=5.39
2024-12-08 08:28:45,898 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=61.6 pTM=0.454 ipTM=0.149 tol=4.36
2024-12-08 08:29:00,993 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=61.7 pTM=0.453 ipTM=0.151 tol=3.29
2024-12-08 08:29:16,097 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=61.4 pTM=0.451 ipTM=0.147 tol=7.86
2024-12-08 08:29:31,203 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=61.7 pTM=0.453 ipTM=0.148 tol=8.14
2024-12-08 08:29:46,318 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=61.8 pTM=0.453 ipTM=0.145 tol=8.8
2024-12-08 08:30:01,425 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=61.5 pTM=0.452 ipTM=0.147 tol=8.32
2024-12-08 08:30:16,530 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=61.6 pTM=0.453 ipTM=0.141 tol=5.01
2024-12-08 08:30:31,624 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=61.5 pTM=0.451 ipTM=0.144 tol=2.84
2024-12-08 08:30:46,728 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=61.1 pTM=0.451 ipTM=0.142 tol=2.39
2024-12-08 08:31:01,844 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=61.3 pTM=0.452 ipTM=0.144 tol=3.46
2024-12-08 08:31:16,940 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=61.6 pTM=0.454 ipTM=0.143 tol=5.71
2024-12-08 08:31:32,037 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=61.2 pTM=0.452 ipTM=0.146 tol=6.46
2024-12-08 08:31:47,146 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=61.9 pTM=0.455 ipTM=0.145 tol=6.83
2024-12-08 08:32:02,245 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=61.4 pTM=0.452 ipTM=0.147 tol=7.1
2024-12-08 08:32:17,347 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=61.6 pTM=0.453 ipTM=0.144 tol=1.99
2024-12-08 08:32:32,453 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=61.4 pTM=0.451 ipTM=0.14 tol=3.03
2024-12-08 08:32:47,579 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=61.4 pTM=0.45 ipTM=0.139 tol=7.37
2024-12-08 08:32:47,579 alphafold2_multimer_v3_model_3_seed_000 took 468.2s (30 recycles)
2024-12-08 08:33:03,097 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=57.8 pTM=0.461 ipTM=0.18
2024-12-08 08:33:18,164 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=60.4 pTM=0.473 ipTM=0.173 tol=8.31
2024-12-08 08:33:33,268 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=59.9 pTM=0.465 ipTM=0.156 tol=7.57
2024-12-08 08:33:48,362 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=60.1 pTM=0.466 ipTM=0.161 tol=9.34
2024-12-08 08:34:03,457 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=60.4 pTM=0.47 ipTM=0.164 tol=4.5
2024-12-08 08:34:18,562 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=60.2 pTM=0.468 ipTM=0.158 tol=6.34
2024-12-08 08:34:33,672 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=60.4 pTM=0.467 ipTM=0.157 tol=6.18
2024-12-08 08:34:48,770 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=60.4 pTM=0.468 ipTM=0.158 tol=8.49
2024-12-08 08:35:03,867 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=60.3 pTM=0.466 ipTM=0.157 tol=8.12
2024-12-08 08:35:18,969 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=60.2 pTM=0.468 ipTM=0.163 tol=5.45
2024-12-08 08:35:34,087 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=60.1 pTM=0.464 ipTM=0.155 tol=3.97
2024-12-08 08:35:49,206 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=60.4 pTM=0.466 ipTM=0.156 tol=4.75
2024-12-08 08:36:04,326 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=60.1 pTM=0.464 ipTM=0.157 tol=4.04
2024-12-08 08:36:19,444 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=60.6 pTM=0.465 ipTM=0.156 tol=6.94
2024-12-08 08:36:34,570 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=60.4 pTM=0.465 ipTM=0.16 tol=3.85
2024-12-08 08:36:49,705 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=60.6 pTM=0.463 ipTM=0.156 tol=5.96
2024-12-08 08:37:04,828 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=60.3 pTM=0.46 ipTM=0.155 tol=5.11
2024-12-08 08:37:19,954 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=60.3 pTM=0.464 ipTM=0.158 tol=4.41
2024-12-08 08:37:35,090 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=60.2 pTM=0.463 ipTM=0.154 tol=2.69
2024-12-08 08:37:50,209 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=60.5 pTM=0.463 ipTM=0.156 tol=4.39
2024-12-08 08:38:05,316 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=60 pTM=0.462 ipTM=0.155 tol=4.16
2024-12-08 08:38:20,442 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=60.4 pTM=0.462 ipTM=0.157 tol=3.26
2024-12-08 08:38:35,570 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=59.8 pTM=0.462 ipTM=0.154 tol=3
2024-12-08 08:38:50,714 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=60.6 pTM=0.465 ipTM=0.157 tol=3.5
2024-12-08 08:39:05,846 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=60.2 pTM=0.464 ipTM=0.149 tol=3.32
2024-12-08 08:39:20,976 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=60.3 pTM=0.462 ipTM=0.153 tol=3.86
2024-12-08 08:39:36,103 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=60.2 pTM=0.462 ipTM=0.149 tol=3.7
2024-12-08 08:39:51,241 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=60.6 pTM=0.462 ipTM=0.154 tol=3.7
2024-12-08 08:40:06,366 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=60.2 pTM=0.462 ipTM=0.147 tol=3.35
2024-12-08 08:40:21,503 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=60.3 pTM=0.461 ipTM=0.152 tol=2.63
2024-12-08 08:40:36,636 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=60.2 pTM=0.461 ipTM=0.148 tol=3.27
2024-12-08 08:40:36,637 alphafold2_multimer_v3_model_4_seed_000 took 468.6s (30 recycles)
2024-12-08 08:40:52,178 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=57.2 pTM=0.456 ipTM=0.157
2024-12-08 08:41:07,342 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=60.8 pTM=0.462 ipTM=0.14 tol=11.1
2024-12-08 08:41:22,514 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=60.4 pTM=0.451 ipTM=0.129 tol=8.22
2024-12-08 08:41:37,676 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=61.2 pTM=0.455 ipTM=0.126 tol=4.87
2024-12-08 08:41:52,852 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=61.5 pTM=0.455 ipTM=0.127 tol=5.55
2024-12-08 08:42:08,029 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=61.4 pTM=0.454 ipTM=0.13 tol=4.14
2024-12-08 08:42:23,199 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=61.7 pTM=0.456 ipTM=0.129 tol=4.75
2024-12-08 08:42:38,371 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=61.5 pTM=0.454 ipTM=0.126 tol=6.44
2024-12-08 08:42:53,534 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=61.8 pTM=0.457 ipTM=0.128 tol=5.99
2024-12-08 08:43:08,686 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=61.3 pTM=0.452 ipTM=0.129 tol=5.98
2024-12-08 08:43:23,845 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=61.8 pTM=0.456 ipTM=0.13 tol=6.62
2024-12-08 08:43:38,994 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=61.6 pTM=0.453 ipTM=0.126 tol=4.92
2024-12-08 08:43:54,148 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=61.5 pTM=0.456 ipTM=0.131 tol=5.98
2024-12-08 08:44:09,316 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=61.4 pTM=0.451 ipTM=0.127 tol=4.26
2024-12-08 08:44:24,483 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=61.8 pTM=0.457 ipTM=0.134 tol=2.67
2024-12-08 08:44:39,647 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=61.5 pTM=0.452 ipTM=0.128 tol=2.54
2024-12-08 08:44:54,813 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=61.6 pTM=0.455 ipTM=0.134 tol=1.56
2024-12-08 08:45:09,981 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=61.5 pTM=0.453 ipTM=0.125 tol=3.19
2024-12-08 08:45:25,151 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=61.9 pTM=0.458 ipTM=0.135 tol=3.11
2024-12-08 08:45:40,319 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=61.2 pTM=0.451 ipTM=0.129 tol=3.56
2024-12-08 08:45:55,490 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=61.9 pTM=0.456 ipTM=0.129 tol=2.81
2024-12-08 08:46:10,660 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=61.5 pTM=0.451 ipTM=0.125 tol=3.23
2024-12-08 08:46:25,811 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=61.6 pTM=0.455 ipTM=0.133 tol=2.48
2024-12-08 08:46:40,982 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=60.9 pTM=0.451 ipTM=0.126 tol=2.38
2024-12-08 08:46:56,155 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=61.8 pTM=0.457 ipTM=0.131 tol=2.66
2024-12-08 08:47:11,333 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=61 pTM=0.451 ipTM=0.128 tol=2.21
2024-12-08 08:47:26,487 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=61.5 pTM=0.457 ipTM=0.135 tol=3.92
2024-12-08 08:47:41,651 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=61.4 pTM=0.451 ipTM=0.126 tol=4.81
2024-12-08 08:47:56,809 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=61.6 pTM=0.455 ipTM=0.13 tol=5.14
2024-12-08 08:48:11,958 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=61.3 pTM=0.451 ipTM=0.126 tol=5.15
2024-12-08 08:48:27,110 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=61.4 pTM=0.454 ipTM=0.132 tol=6.13
2024-12-08 08:48:27,111 alphafold2_multimer_v3_model_5_seed_000 took 470.0s (30 recycles)
2024-12-08 08:48:27,563 reranking models by 'multimer' metric
2024-12-08 08:48:29,561 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-08 08:49:32,818 Relaxation took 65.3s
2024-12-08 08:49:32,818 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=60.2 pTM=0.461 ipTM=0.148
2024-12-08 08:50:39,404 Relaxation took 66.6s
2024-12-08 08:50:39,404 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=61.3 pTM=0.464 ipTM=0.139
2024-12-08 08:51:38,644 Relaxation took 59.2s
2024-12-08 08:51:38,644 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=62.6 pTM=0.452 ipTM=0.138
2024-12-08 08:52:42,750 Relaxation took 64.1s
2024-12-08 08:52:42,750 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=61.4 pTM=0.45 ipTM=0.139
2024-12-08 08:53:48,505 Relaxation took 65.8s
2024-12-08 08:53:48,505 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=61.4 pTM=0.454 ipTM=0.132
2024-12-08 08:53:50,038 Done