2024-12-08 08:05:39,581 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-08 08:05:39,887 Running on GPU
2024-12-08 08:05:41,473 Found 6 citations for tools or databases
2024-12-08 08:05:41,473 Query 1/1: RNF26_CUEDC2 (length 720)
2024-12-08 08:05:41,763 Sleeping for 9s. Reason: PENDING
2024-12-08 08:05:51,028 Sleeping for 5s. Reason: RUNNING
2024-12-08 08:05:56,282 Sleeping for 10s. Reason: RUNNING
2024-12-08 08:06:06,547 Sleeping for 8s. Reason: RUNNING
2024-12-08 08:06:14,811 Sleeping for 10s. Reason: RUNNING
2024-12-08 08:06:25,069 Sleeping for 7s. Reason: RUNNING
2024-12-08 08:06:32,322 Sleeping for 10s. Reason: RUNNING
2024-12-08 08:06:42,578 Sleeping for 8s. Reason: RUNNING
2024-12-08 08:06:52,134 Sleeping for 6s. Reason: PENDING
2024-12-08 08:06:58,396 Sleeping for 7s. Reason: RUNNING
2024-12-08 08:07:05,659 Sleeping for 9s. Reason: RUNNING
2024-12-08 08:07:14,920 Sleeping for 5s. Reason: RUNNING
2024-12-08 08:07:20,169 Sleeping for 6s. Reason: RUNNING
2024-12-08 08:07:28,492 Setting max_seq=508, max_extra_seq=2048
2024-12-08 08:09:31,249 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=50.9 pTM=0.214 ipTM=0.14
2024-12-08 08:09:40,798 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=49 pTM=0.211 ipTM=0.134 tol=20.6
2024-12-08 08:09:50,367 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=49.6 pTM=0.21 ipTM=0.119 tol=9.98
2024-12-08 08:09:59,937 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=50.1 pTM=0.21 ipTM=0.118 tol=7.62
2024-12-08 08:10:09,522 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=49.8 pTM=0.209 ipTM=0.119 tol=7.48
2024-12-08 08:10:19,110 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=50.5 pTM=0.21 ipTM=0.119 tol=6.9
2024-12-08 08:10:28,705 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=50 pTM=0.208 ipTM=0.119 tol=5.35
2024-12-08 08:10:38,300 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=49.8 pTM=0.21 ipTM=0.123 tol=5.14
2024-12-08 08:10:47,906 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=50.1 pTM=0.21 ipTM=0.13 tol=9.37
2024-12-08 08:10:57,503 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=49.7 pTM=0.21 ipTM=0.139 tol=4.61
2024-12-08 08:11:07,108 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=50.7 pTM=0.21 ipTM=0.131 tol=4.01
2024-12-08 08:11:16,717 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=50.2 pTM=0.21 ipTM=0.135 tol=2.41
2024-12-08 08:11:26,327 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=50.5 pTM=0.21 ipTM=0.147 tol=1.98
2024-12-08 08:11:35,948 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=50.4 pTM=0.209 ipTM=0.14 tol=2.33
2024-12-08 08:11:45,562 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=50.2 pTM=0.21 ipTM=0.136 tol=2.18
2024-12-08 08:11:55,182 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=50.1 pTM=0.21 ipTM=0.134 tol=2.17
2024-12-08 08:12:04,801 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=50.6 pTM=0.211 ipTM=0.133 tol=1.95
2024-12-08 08:12:14,414 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=50.6 pTM=0.211 ipTM=0.135 tol=3.61
2024-12-08 08:12:24,033 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=50.3 pTM=0.211 ipTM=0.132 tol=1.79
2024-12-08 08:12:33,649 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=50.7 pTM=0.212 ipTM=0.127 tol=2.96
2024-12-08 08:12:43,273 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=50.4 pTM=0.211 ipTM=0.124 tol=2.37
2024-12-08 08:12:52,892 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=50.5 pTM=0.212 ipTM=0.12 tol=2.77
2024-12-08 08:13:02,525 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=50.7 pTM=0.211 ipTM=0.119 tol=1.92
2024-12-08 08:13:12,153 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=50.5 pTM=0.211 ipTM=0.117 tol=3.76
2024-12-08 08:13:21,778 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=50.6 pTM=0.211 ipTM=0.116 tol=4.98
2024-12-08 08:13:31,405 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=50.3 pTM=0.212 ipTM=0.117 tol=5
2024-12-08 08:13:41,026 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=50.5 pTM=0.212 ipTM=0.118 tol=3.53
2024-12-08 08:13:50,654 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=50.5 pTM=0.21 ipTM=0.118 tol=1.93
2024-12-08 08:14:00,286 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=49.1 pTM=0.21 ipTM=0.119 tol=6.61
2024-12-08 08:14:09,926 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=50 pTM=0.209 ipTM=0.116 tol=4.47
2024-12-08 08:14:19,568 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=50.4 pTM=0.209 ipTM=0.117 tol=2.94
2024-12-08 08:14:19,569 alphafold2_multimer_v3_model_1_seed_000 took 406.2s (30 recycles)
2024-12-08 08:14:29,538 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=46.6 pTM=0.217 ipTM=0.123
2024-12-08 08:14:39,176 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=48.5 pTM=0.218 ipTM=0.121 tol=19.2
2024-12-08 08:14:48,800 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=48.5 pTM=0.219 ipTM=0.12 tol=8.27
2024-12-08 08:14:58,434 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=49.1 pTM=0.218 ipTM=0.125 tol=12
2024-12-08 08:15:08,067 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=49.8 pTM=0.216 ipTM=0.12 tol=5.16
2024-12-08 08:15:17,724 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=50 pTM=0.215 ipTM=0.121 tol=3.79
2024-12-08 08:15:27,380 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=50.4 pTM=0.215 ipTM=0.12 tol=2.43
2024-12-08 08:15:37,052 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=50.4 pTM=0.213 ipTM=0.126 tol=3.79
2024-12-08 08:15:46,720 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=51 pTM=0.213 ipTM=0.133 tol=4.1
2024-12-08 08:15:56,389 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=51.1 pTM=0.213 ipTM=0.149 tol=2.59
2024-12-08 08:16:06,071 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=52.1 pTM=0.212 ipTM=0.153 tol=3.9
2024-12-08 08:16:15,742 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=51.8 pTM=0.211 ipTM=0.152 tol=3.81
2024-12-08 08:16:25,409 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=51.9 pTM=0.211 ipTM=0.166 tol=11.6
2024-12-08 08:16:35,065 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=52.1 pTM=0.212 ipTM=0.158 tol=6.14
2024-12-08 08:16:44,730 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=52.2 pTM=0.212 ipTM=0.147 tol=3.37
2024-12-08 08:16:54,387 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=51.9 pTM=0.212 ipTM=0.146 tol=3.64
2024-12-08 08:17:04,047 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=52.5 pTM=0.212 ipTM=0.144 tol=9.38
2024-12-08 08:17:13,708 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=53.1 pTM=0.211 ipTM=0.135 tol=4.32
2024-12-08 08:17:23,366 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=53 pTM=0.212 ipTM=0.131 tol=4.04
2024-12-08 08:17:33,035 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=53.4 pTM=0.21 ipTM=0.129 tol=3.17
2024-12-08 08:17:42,695 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=53.4 pTM=0.21 ipTM=0.125 tol=2.4
2024-12-08 08:17:52,369 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=53.7 pTM=0.21 ipTM=0.12 tol=2.91
2024-12-08 08:18:02,036 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=53.7 pTM=0.21 ipTM=0.118 tol=3.44
2024-12-08 08:18:11,701 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=53.8 pTM=0.211 ipTM=0.117 tol=3.07
2024-12-08 08:18:21,368 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=53.6 pTM=0.21 ipTM=0.117 tol=2.66
2024-12-08 08:18:31,043 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=53.5 pTM=0.21 ipTM=0.116 tol=1.98
2024-12-08 08:18:40,721 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=53.5 pTM=0.21 ipTM=0.116 tol=1.92
2024-12-08 08:18:50,405 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=53.7 pTM=0.209 ipTM=0.116 tol=2.44
2024-12-08 08:19:00,076 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=53.3 pTM=0.211 ipTM=0.119 tol=3.51
2024-12-08 08:19:09,751 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=54.2 pTM=0.21 ipTM=0.114 tol=4.17
2024-12-08 08:19:19,426 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=53.1 pTM=0.21 ipTM=0.117 tol=4.54
2024-12-08 08:19:19,426 alphafold2_multimer_v3_model_2_seed_000 took 299.5s (30 recycles)
2024-12-08 08:19:29,468 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=53.4 pTM=0.209 ipTM=0.153
2024-12-08 08:19:39,178 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=55.9 pTM=0.223 ipTM=0.137 tol=20.1
2024-12-08 08:19:48,883 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=56.7 pTM=0.236 ipTM=0.124 tol=19.2
2024-12-08 08:19:58,573 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=56.9 pTM=0.244 ipTM=0.119 tol=10
2024-12-08 08:20:08,267 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=57.3 pTM=0.25 ipTM=0.117 tol=8.15
2024-12-08 08:20:17,952 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=57.9 pTM=0.252 ipTM=0.12 tol=6.73
2024-12-08 08:20:27,635 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=57.8 pTM=0.252 ipTM=0.124 tol=2.49
2024-12-08 08:20:37,314 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=57.5 pTM=0.254 ipTM=0.129 tol=2.68
2024-12-08 08:20:46,981 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=57.7 pTM=0.255 ipTM=0.13 tol=2.25
2024-12-08 08:20:56,653 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=57.1 pTM=0.249 ipTM=0.125 tol=3.24
2024-12-08 08:21:06,322 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=57.9 pTM=0.256 ipTM=0.13 tol=3.51
2024-12-08 08:21:15,993 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=57.4 pTM=0.252 ipTM=0.132 tol=2.51
2024-12-08 08:21:25,674 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=57.9 pTM=0.251 ipTM=0.128 tol=2.9
2024-12-08 08:21:35,348 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=57.2 pTM=0.252 ipTM=0.127 tol=1.62
2024-12-08 08:21:45,026 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=57.4 pTM=0.25 ipTM=0.135 tol=2.62
2024-12-08 08:21:54,693 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=56.9 pTM=0.25 ipTM=0.133 tol=3.35
2024-12-08 08:22:04,366 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=57.8 pTM=0.253 ipTM=0.129 tol=1.77
2024-12-08 08:22:14,039 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=57.7 pTM=0.253 ipTM=0.127 tol=1.74
2024-12-08 08:22:23,709 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=57.5 pTM=0.252 ipTM=0.129 tol=3.29
2024-12-08 08:22:33,390 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=57.6 pTM=0.253 ipTM=0.127 tol=2.92
2024-12-08 08:22:43,083 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=57.9 pTM=0.252 ipTM=0.121 tol=1.77
2024-12-08 08:22:52,774 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=57.9 pTM=0.253 ipTM=0.123 tol=3.14
2024-12-08 08:23:02,454 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=58.2 pTM=0.254 ipTM=0.12 tol=2.71
2024-12-08 08:23:12,127 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=57.7 pTM=0.253 ipTM=0.129 tol=2.26
2024-12-08 08:23:21,806 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=58.2 pTM=0.254 ipTM=0.125 tol=1.84
2024-12-08 08:23:31,480 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=57.6 pTM=0.252 ipTM=0.126 tol=3.24
2024-12-08 08:23:41,156 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=58 pTM=0.25 ipTM=0.13 tol=2.18
2024-12-08 08:23:50,835 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=57.6 pTM=0.25 ipTM=0.137 tol=3.5
2024-12-08 08:24:00,507 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=57.8 pTM=0.252 ipTM=0.128 tol=2.84
2024-12-08 08:24:10,188 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=58 pTM=0.252 ipTM=0.124 tol=3.3
2024-12-08 08:24:19,857 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=57.9 pTM=0.253 ipTM=0.129 tol=1.26
2024-12-08 08:24:19,857 alphafold2_multimer_v3_model_3_seed_000 took 300.1s (30 recycles)
2024-12-08 08:24:29,893 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=45.1 pTM=0.218 ipTM=0.162
2024-12-08 08:24:39,608 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=46.7 pTM=0.215 ipTM=0.192 tol=14.6
2024-12-08 08:24:49,324 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=46.2 pTM=0.215 ipTM=0.163 tol=5.87
2024-12-08 08:24:59,046 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=46.8 pTM=0.215 ipTM=0.146 tol=6.25
2024-12-08 08:25:08,770 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=47 pTM=0.214 ipTM=0.151 tol=6.32
2024-12-08 08:25:18,505 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=46.9 pTM=0.213 ipTM=0.133 tol=4.75
2024-12-08 08:25:28,233 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=46.3 pTM=0.214 ipTM=0.157 tol=4.77
2024-12-08 08:25:37,963 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=46.1 pTM=0.217 ipTM=0.147 tol=4.19
2024-12-08 08:25:47,685 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=46.9 pTM=0.215 ipTM=0.15 tol=4.79
2024-12-08 08:25:57,422 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=46.8 pTM=0.215 ipTM=0.142 tol=4.87
2024-12-08 08:26:07,144 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=47.2 pTM=0.216 ipTM=0.161 tol=4.14
2024-12-08 08:26:16,862 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=46.3 pTM=0.217 ipTM=0.165 tol=3.65
2024-12-08 08:26:26,572 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=46.2 pTM=0.217 ipTM=0.164 tol=4.96
2024-12-08 08:26:36,296 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=46.1 pTM=0.217 ipTM=0.155 tol=5.38
2024-12-08 08:26:46,018 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=46.8 pTM=0.216 ipTM=0.149 tol=4.94
2024-12-08 08:26:55,733 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=46.8 pTM=0.216 ipTM=0.153 tol=2.76
2024-12-08 08:27:05,456 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=46.8 pTM=0.214 ipTM=0.141 tol=4.18
2024-12-08 08:27:15,183 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=46.8 pTM=0.213 ipTM=0.144 tol=4.18
2024-12-08 08:27:24,913 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=46.8 pTM=0.214 ipTM=0.156 tol=3.48
2024-12-08 08:27:34,653 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=47 pTM=0.212 ipTM=0.164 tol=5.87
2024-12-08 08:27:44,377 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=47.2 pTM=0.214 ipTM=0.152 tol=4.58
2024-12-08 08:27:54,105 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=47 pTM=0.213 ipTM=0.161 tol=5.55
2024-12-08 08:28:03,833 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=47.3 pTM=0.214 ipTM=0.161 tol=4.91
2024-12-08 08:28:13,544 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=47.4 pTM=0.217 ipTM=0.181 tol=5.38
2024-12-08 08:28:23,258 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=47.4 pTM=0.216 ipTM=0.178 tol=3.41
2024-12-08 08:28:32,973 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=47.3 pTM=0.216 ipTM=0.166 tol=3.67
2024-12-08 08:28:42,701 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=47.6 pTM=0.216 ipTM=0.155 tol=3.84
2024-12-08 08:28:52,421 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=47.7 pTM=0.216 ipTM=0.173 tol=4.08
2024-12-08 08:29:02,129 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=47 pTM=0.217 ipTM=0.175 tol=4.61
2024-12-08 08:29:11,870 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=47.2 pTM=0.215 ipTM=0.153 tol=5.89
2024-12-08 08:29:21,592 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=47.4 pTM=0.216 ipTM=0.167 tol=11.5
2024-12-08 08:29:21,593 alphafold2_multimer_v3_model_4_seed_000 took 301.4s (30 recycles)
2024-12-08 08:29:31,589 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=45.9 pTM=0.257 ipTM=0.273
2024-12-08 08:29:41,272 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=47.3 pTM=0.23 ipTM=0.196 tol=10.7
2024-12-08 08:29:50,985 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=47.5 pTM=0.21 ipTM=0.128 tol=9.85
2024-12-08 08:30:00,680 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=47.4 pTM=0.211 ipTM=0.128 tol=6.25
2024-12-08 08:30:10,385 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=47.2 pTM=0.21 ipTM=0.122 tol=4.69
2024-12-08 08:30:20,093 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=47.7 pTM=0.209 ipTM=0.121 tol=5.34
2024-12-08 08:30:29,799 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=47.1 pTM=0.209 ipTM=0.128 tol=3.53
2024-12-08 08:30:39,520 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=47.4 pTM=0.208 ipTM=0.115 tol=3.34
2024-12-08 08:30:49,241 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=48 pTM=0.208 ipTM=0.117 tol=2.68
2024-12-08 08:30:58,940 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=47.2 pTM=0.209 ipTM=0.12 tol=4.04
2024-12-08 08:31:08,640 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=48.3 pTM=0.208 ipTM=0.115 tol=5.39
2024-12-08 08:31:18,328 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=47.3 pTM=0.209 ipTM=0.126 tol=4.27
2024-12-08 08:31:28,017 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=46.8 pTM=0.209 ipTM=0.12 tol=2.82
2024-12-08 08:31:37,697 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=47.5 pTM=0.21 ipTM=0.123 tol=3.52
2024-12-08 08:31:47,373 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=47.2 pTM=0.211 ipTM=0.13 tol=3.97
2024-12-08 08:31:57,054 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=47.5 pTM=0.211 ipTM=0.126 tol=2.64
2024-12-08 08:32:06,741 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=46.9 pTM=0.21 ipTM=0.119 tol=4.82
2024-12-08 08:32:16,417 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=47.5 pTM=0.21 ipTM=0.123 tol=3.55
2024-12-08 08:32:26,086 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=47.1 pTM=0.211 ipTM=0.125 tol=3.92
2024-12-08 08:32:35,773 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=47.5 pTM=0.211 ipTM=0.123 tol=2.6
2024-12-08 08:32:45,446 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=47.3 pTM=0.211 ipTM=0.125 tol=2.81
2024-12-08 08:32:55,121 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=48.1 pTM=0.21 ipTM=0.12 tol=5.41
2024-12-08 08:33:04,808 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=48.1 pTM=0.211 ipTM=0.118 tol=4.6
2024-12-08 08:33:14,501 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=47.9 pTM=0.21 ipTM=0.121 tol=6.73
2024-12-08 08:33:24,186 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=47.6 pTM=0.211 ipTM=0.123 tol=9.54
2024-12-08 08:33:33,881 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=48.2 pTM=0.21 ipTM=0.121 tol=4.48
2024-12-08 08:33:43,578 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=47.8 pTM=0.21 ipTM=0.119 tol=4.82
2024-12-08 08:33:53,286 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=48 pTM=0.209 ipTM=0.118 tol=6.68
2024-12-08 08:34:02,985 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=47.9 pTM=0.21 ipTM=0.114 tol=5.09
2024-12-08 08:34:12,681 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=47.9 pTM=0.209 ipTM=0.109 tol=5.43
2024-12-08 08:34:22,386 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=47.8 pTM=0.209 ipTM=0.112 tol=4.15
2024-12-08 08:34:22,386 alphafold2_multimer_v3_model_5_seed_000 took 300.5s (30 recycles)
2024-12-08 08:34:22,715 reranking models by 'multimer' metric
2024-12-08 08:34:23,481 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-08 08:35:16,343 Relaxation took 53.6s
2024-12-08 08:35:16,343 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=47.4 pTM=0.216 ipTM=0.167
2024-12-08 08:36:16,319 Relaxation took 60.0s
2024-12-08 08:36:16,319 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=57.9 pTM=0.253 ipTM=0.129
2024-12-08 08:37:08,694 Relaxation took 52.4s
2024-12-08 08:37:08,694 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=50.4 pTM=0.209 ipTM=0.117
2024-12-08 08:38:03,598 Relaxation took 54.9s
2024-12-08 08:38:03,599 rank_004_alphafold2_multimer_v3_model_2_seed_000 pLDDT=53.1 pTM=0.21 ipTM=0.117
2024-12-08 08:38:47,704 Relaxation took 44.1s
2024-12-08 08:38:47,705 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=47.8 pTM=0.209 ipTM=0.112
2024-12-08 08:38:49,264 Done