2024-12-08 08:07:47,427 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-08 08:07:47,734 Running on GPU
2024-12-08 08:07:48,433 Found 6 citations for tools or databases
2024-12-08 08:07:48,433 Query 1/1: RNF2_YAF2 (length 516)
2024-12-08 08:07:52,019 Setting max_seq=508, max_extra_seq=2048
2024-12-08 08:10:04,251 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=54.9 pTM=0.346 ipTM=0.364
2024-12-08 08:10:10,169 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=56.1 pTM=0.344 ipTM=0.365 tol=6.09
2024-12-08 08:10:16,097 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=56 pTM=0.341 ipTM=0.365 tol=7.69
2024-12-08 08:10:22,026 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=56 pTM=0.344 ipTM=0.368 tol=4.88
2024-12-08 08:10:27,968 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=56.5 pTM=0.344 ipTM=0.367 tol=3.05
2024-12-08 08:10:33,901 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=56.3 pTM=0.344 ipTM=0.368 tol=4.88
2024-12-08 08:10:39,841 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=56.6 pTM=0.344 ipTM=0.368 tol=2.07
2024-12-08 08:10:45,782 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=56.5 pTM=0.345 ipTM=0.369 tol=2.51
2024-12-08 08:10:51,725 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=56.2 pTM=0.345 ipTM=0.369 tol=2.44
2024-12-08 08:10:57,674 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=56.7 pTM=0.344 ipTM=0.369 tol=2.36
2024-12-08 08:11:03,625 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=56.3 pTM=0.344 ipTM=0.369 tol=3.51
2024-12-08 08:11:09,585 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=56.5 pTM=0.343 ipTM=0.367 tol=2.28
2024-12-08 08:11:15,550 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=56.4 pTM=0.343 ipTM=0.367 tol=2.66
2024-12-08 08:11:21,507 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=56.6 pTM=0.343 ipTM=0.367 tol=2.59
2024-12-08 08:11:27,478 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=56.7 pTM=0.342 ipTM=0.367 tol=3.46
2024-12-08 08:11:33,442 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=56.6 pTM=0.343 ipTM=0.367 tol=3.46
2024-12-08 08:11:39,413 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=56.6 pTM=0.343 ipTM=0.367 tol=3.07
2024-12-08 08:11:45,380 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=56.8 pTM=0.343 ipTM=0.367 tol=2.87
2024-12-08 08:11:51,354 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=57 pTM=0.344 ipTM=0.369 tol=2.26
2024-12-08 08:11:57,329 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=56.8 pTM=0.343 ipTM=0.368 tol=2.26
2024-12-08 08:12:03,312 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=56.6 pTM=0.344 ipTM=0.369 tol=2.87
2024-12-08 08:12:09,323 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=56.4 pTM=0.343 ipTM=0.368 tol=1.78
2024-12-08 08:12:15,317 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=56.7 pTM=0.343 ipTM=0.368 tol=1.58
2024-12-08 08:12:21,313 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=56.5 pTM=0.343 ipTM=0.368 tol=1.61
2024-12-08 08:12:27,300 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=56.8 pTM=0.344 ipTM=0.368 tol=2.49
2024-12-08 08:12:33,281 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=56.7 pTM=0.344 ipTM=0.368 tol=2.34
2024-12-08 08:12:39,259 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=56.7 pTM=0.343 ipTM=0.367 tol=1.2
2024-12-08 08:12:45,242 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=56.8 pTM=0.343 ipTM=0.367 tol=1.84
2024-12-08 08:12:51,218 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=56.7 pTM=0.343 ipTM=0.368 tol=1.32
2024-12-08 08:12:57,206 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=56.9 pTM=0.343 ipTM=0.367 tol=1.18
2024-12-08 08:13:03,212 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=56.3 pTM=0.342 ipTM=0.367 tol=1.88
2024-12-08 08:13:03,212 alphafold2_multimer_v3_model_1_seed_000 took 307.1s (30 recycles)
2024-12-08 08:13:09,393 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=56.3 pTM=0.344 ipTM=0.37
2024-12-08 08:13:15,400 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=58.2 pTM=0.349 ipTM=0.375 tol=5.9
2024-12-08 08:13:21,389 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=57.5 pTM=0.347 ipTM=0.374 tol=6.33
2024-12-08 08:13:27,371 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=57.9 pTM=0.346 ipTM=0.373 tol=3.28
2024-12-08 08:13:33,351 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=58.3 pTM=0.346 ipTM=0.373 tol=2.65
2024-12-08 08:13:39,334 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=58.2 pTM=0.344 ipTM=0.372 tol=1.53
2024-12-08 08:13:45,322 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=58.2 pTM=0.344 ipTM=0.372 tol=1.61
2024-12-08 08:13:51,322 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=58.1 pTM=0.344 ipTM=0.372 tol=1.93
2024-12-08 08:13:57,323 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=58 pTM=0.345 ipTM=0.373 tol=2.66
2024-12-08 08:14:03,321 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=58.3 pTM=0.344 ipTM=0.372 tol=2.15
2024-12-08 08:14:09,322 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=58.2 pTM=0.344 ipTM=0.372 tol=3.37
2024-12-08 08:14:15,326 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=58.6 pTM=0.344 ipTM=0.372 tol=2.37
2024-12-08 08:14:21,326 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=59.4 pTM=0.344 ipTM=0.372 tol=3.17
2024-12-08 08:14:27,326 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=59.2 pTM=0.343 ipTM=0.371 tol=2.71
2024-12-08 08:14:33,333 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=58.7 pTM=0.344 ipTM=0.373 tol=2.11
2024-12-08 08:14:39,340 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=59.1 pTM=0.345 ipTM=0.372 tol=1.82
2024-12-08 08:14:45,352 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=59.3 pTM=0.344 ipTM=0.373 tol=3.2
2024-12-08 08:14:51,358 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=59.2 pTM=0.345 ipTM=0.372 tol=2.77
2024-12-08 08:14:57,370 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=59 pTM=0.345 ipTM=0.372 tol=1.68
2024-12-08 08:15:03,368 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=59.3 pTM=0.345 ipTM=0.372 tol=3.31
2024-12-08 08:15:09,375 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=59 pTM=0.345 ipTM=0.373 tol=1.61
2024-12-08 08:15:15,385 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=58.1 pTM=0.345 ipTM=0.372 tol=3.46
2024-12-08 08:15:21,397 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=58.5 pTM=0.344 ipTM=0.371 tol=3.29
2024-12-08 08:15:27,398 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=58.8 pTM=0.344 ipTM=0.372 tol=1.17
2024-12-08 08:15:33,394 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=59.2 pTM=0.345 ipTM=0.372 tol=1.18
2024-12-08 08:15:39,395 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=59.4 pTM=0.344 ipTM=0.372 tol=1.36
2024-12-08 08:15:45,400 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=59.4 pTM=0.344 ipTM=0.372 tol=1.52
2024-12-08 08:15:51,405 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=58.6 pTM=0.344 ipTM=0.372 tol=3.55
2024-12-08 08:15:57,408 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=58.2 pTM=0.345 ipTM=0.372 tol=3.51
2024-12-08 08:16:03,397 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=59.1 pTM=0.344 ipTM=0.372 tol=2.06
2024-12-08 08:16:09,385 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=58.7 pTM=0.345 ipTM=0.372 tol=1.33
2024-12-08 08:16:09,385 alphafold2_multimer_v3_model_2_seed_000 took 186.0s (30 recycles)
2024-12-08 08:16:15,557 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=56.1 pTM=0.335 ipTM=0.361
2024-12-08 08:16:21,555 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=57.6 pTM=0.337 ipTM=0.364 tol=5.34
2024-12-08 08:16:27,557 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=57.7 pTM=0.338 ipTM=0.366 tol=5.41
2024-12-08 08:16:33,571 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=57.6 pTM=0.337 ipTM=0.365 tol=2.92
2024-12-08 08:16:39,597 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=57.8 pTM=0.338 ipTM=0.365 tol=1.78
2024-12-08 08:16:45,621 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=58.3 pTM=0.337 ipTM=0.365 tol=2.97
2024-12-08 08:16:51,622 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=58.1 pTM=0.337 ipTM=0.366 tol=2.79
2024-12-08 08:16:57,619 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=57.9 pTM=0.338 ipTM=0.366 tol=2.72
2024-12-08 08:17:03,621 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=57.6 pTM=0.339 ipTM=0.367 tol=2.85
2024-12-08 08:17:09,617 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=58.6 pTM=0.337 ipTM=0.366 tol=2.54
2024-12-08 08:17:15,610 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=58.1 pTM=0.337 ipTM=0.366 tol=3.37
2024-12-08 08:17:21,607 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=58.2 pTM=0.338 ipTM=0.366 tol=3.43
2024-12-08 08:17:27,619 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=58.2 pTM=0.337 ipTM=0.365 tol=5.1
2024-12-08 08:17:33,627 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=57.9 pTM=0.337 ipTM=0.365 tol=4.73
2024-12-08 08:17:39,628 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=58.3 pTM=0.338 ipTM=0.365 tol=5.21
2024-12-08 08:17:45,612 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=58 pTM=0.338 ipTM=0.366 tol=3.13
2024-12-08 08:17:51,591 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=58.5 pTM=0.339 ipTM=0.366 tol=1.62
2024-12-08 08:17:57,564 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=58.6 pTM=0.339 ipTM=0.367 tol=2.17
2024-12-08 08:18:03,547 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=58.5 pTM=0.339 ipTM=0.367 tol=2.59
2024-12-08 08:18:09,532 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=57 pTM=0.338 ipTM=0.366 tol=6.12
2024-12-08 08:18:15,541 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=57.4 pTM=0.339 ipTM=0.366 tol=6.04
2024-12-08 08:18:21,538 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=57.6 pTM=0.339 ipTM=0.366 tol=4.23
2024-12-08 08:18:27,527 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=58.2 pTM=0.338 ipTM=0.365 tol=2.24
2024-12-08 08:18:33,504 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=58.2 pTM=0.339 ipTM=0.366 tol=2.8
2024-12-08 08:18:39,485 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=58.2 pTM=0.339 ipTM=0.366 tol=3.06
2024-12-08 08:18:45,466 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=58.3 pTM=0.339 ipTM=0.366 tol=3.05
2024-12-08 08:18:51,441 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=58.2 pTM=0.34 ipTM=0.366 tol=2.79
2024-12-08 08:18:57,427 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=57.2 pTM=0.339 ipTM=0.366 tol=4.57
2024-12-08 08:19:03,424 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=57.8 pTM=0.34 ipTM=0.366 tol=4.05
2024-12-08 08:19:09,409 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=58.7 pTM=0.341 ipTM=0.367 tol=4.16
2024-12-08 08:19:15,405 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=58.2 pTM=0.34 ipTM=0.366 tol=4.52
2024-12-08 08:19:15,406 alphafold2_multimer_v3_model_3_seed_000 took 185.8s (30 recycles)
2024-12-08 08:19:21,616 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=55.7 pTM=0.333 ipTM=0.358
2024-12-08 08:19:27,617 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=56.3 pTM=0.337 ipTM=0.363 tol=7.93
2024-12-08 08:19:33,609 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=56.8 pTM=0.337 ipTM=0.363 tol=3.9
2024-12-08 08:19:39,597 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=57.4 pTM=0.337 ipTM=0.363 tol=4.37
2024-12-08 08:19:45,587 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=57.3 pTM=0.336 ipTM=0.362 tol=1.59
2024-12-08 08:19:51,573 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=57.9 pTM=0.338 ipTM=0.364 tol=4.93
2024-12-08 08:19:57,565 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=57.7 pTM=0.337 ipTM=0.364 tol=4.86
2024-12-08 08:20:03,559 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=57.5 pTM=0.338 ipTM=0.364 tol=1.63
2024-12-08 08:20:09,567 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=57.5 pTM=0.337 ipTM=0.364 tol=1.14
2024-12-08 08:20:15,581 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=57.5 pTM=0.337 ipTM=0.363 tol=1.85
2024-12-08 08:20:21,593 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=57.4 pTM=0.337 ipTM=0.364 tol=2.29
2024-12-08 08:20:27,585 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=57.3 pTM=0.337 ipTM=0.364 tol=2.07
2024-12-08 08:20:33,574 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=57.4 pTM=0.337 ipTM=0.363 tol=1.93
2024-12-08 08:20:39,558 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=57.4 pTM=0.336 ipTM=0.362 tol=2.69
2024-12-08 08:20:45,555 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=57.3 pTM=0.336 ipTM=0.362 tol=4.58
2024-12-08 08:20:51,554 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=57.3 pTM=0.336 ipTM=0.362 tol=2.92
2024-12-08 08:20:57,554 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=57.5 pTM=0.336 ipTM=0.362 tol=2.99
2024-12-08 08:21:03,571 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=57.2 pTM=0.335 ipTM=0.362 tol=2.3
2024-12-08 08:21:09,593 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=57.8 pTM=0.336 ipTM=0.363 tol=3.98
2024-12-08 08:21:15,592 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=57.7 pTM=0.335 ipTM=0.362 tol=2.17
2024-12-08 08:21:21,586 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=57.6 pTM=0.337 ipTM=0.364 tol=3.36
2024-12-08 08:21:27,574 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=57.6 pTM=0.336 ipTM=0.363 tol=4.62
2024-12-08 08:21:33,563 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=57.4 pTM=0.335 ipTM=0.362 tol=2.47
2024-12-08 08:21:39,553 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=57.7 pTM=0.334 ipTM=0.361 tol=2.24
2024-12-08 08:21:45,552 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=57.4 pTM=0.336 ipTM=0.362 tol=2.13
2024-12-08 08:21:51,567 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=57.5 pTM=0.336 ipTM=0.363 tol=4.19
2024-12-08 08:21:57,590 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=57.4 pTM=0.335 ipTM=0.362 tol=5.44
2024-12-08 08:22:03,607 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=57.5 pTM=0.336 ipTM=0.364 tol=1.86
2024-12-08 08:22:09,605 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=57.5 pTM=0.337 ipTM=0.365 tol=6.5
2024-12-08 08:22:15,601 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=57.5 pTM=0.336 ipTM=0.363 tol=5.99
2024-12-08 08:22:21,590 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=57.3 pTM=0.336 ipTM=0.363 tol=1.88
2024-12-08 08:22:21,590 alphafold2_multimer_v3_model_4_seed_000 took 186.0s (30 recycles)
2024-12-08 08:22:27,776 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=53.9 pTM=0.338 ipTM=0.364
2024-12-08 08:22:33,774 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=56.1 pTM=0.341 ipTM=0.37 tol=7.17
2024-12-08 08:22:39,791 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=56.2 pTM=0.34 ipTM=0.37 tol=5.04
2024-12-08 08:22:45,799 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=56 pTM=0.339 ipTM=0.368 tol=3.15
2024-12-08 08:22:51,808 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=56.3 pTM=0.34 ipTM=0.368 tol=3.56
2024-12-08 08:22:57,817 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=56.2 pTM=0.34 ipTM=0.369 tol=2.81
2024-12-08 08:23:03,819 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=56.5 pTM=0.34 ipTM=0.369 tol=2.51
2024-12-08 08:23:09,822 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=56.2 pTM=0.34 ipTM=0.369 tol=1.94
2024-12-08 08:23:15,835 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=56.4 pTM=0.34 ipTM=0.369 tol=3.93
2024-12-08 08:23:21,846 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=56.4 pTM=0.339 ipTM=0.368 tol=2.53
2024-12-08 08:23:27,854 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=56 pTM=0.339 ipTM=0.368 tol=3.73
2024-12-08 08:23:33,871 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=56.2 pTM=0.339 ipTM=0.369 tol=1.73
2024-12-08 08:23:39,859 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=56.5 pTM=0.34 ipTM=0.369 tol=2.71
2024-12-08 08:23:45,842 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=56.6 pTM=0.341 ipTM=0.37 tol=1.79
2024-12-08 08:23:51,821 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=56.3 pTM=0.34 ipTM=0.368 tol=1.6
2024-12-08 08:23:57,807 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=56.5 pTM=0.339 ipTM=0.368 tol=1.14
2024-12-08 08:24:03,796 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=57 pTM=0.34 ipTM=0.369 tol=2.02
2024-12-08 08:24:09,791 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=56.8 pTM=0.34 ipTM=0.369 tol=2.03
2024-12-08 08:24:15,795 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=56.8 pTM=0.34 ipTM=0.369 tol=1.71
2024-12-08 08:24:21,816 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=56.4 pTM=0.34 ipTM=0.368 tol=1.19
2024-12-08 08:24:27,810 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=56.6 pTM=0.341 ipTM=0.369 tol=3.16
2024-12-08 08:24:33,788 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=56.8 pTM=0.339 ipTM=0.368 tol=3.28
2024-12-08 08:24:39,761 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=56.7 pTM=0.338 ipTM=0.367 tol=1.48
2024-12-08 08:24:45,739 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=56.9 pTM=0.339 ipTM=0.368 tol=1.73
2024-12-08 08:24:51,723 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=56.8 pTM=0.339 ipTM=0.368 tol=2.07
2024-12-08 08:24:57,715 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=56.3 pTM=0.34 ipTM=0.368 tol=1.76
2024-12-08 08:25:03,710 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=56.5 pTM=0.339 ipTM=0.368 tol=1.22
2024-12-08 08:25:09,723 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=56.8 pTM=0.34 ipTM=0.369 tol=1.3
2024-12-08 08:25:15,722 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=56.2 pTM=0.34 ipTM=0.37 tol=2.01
2024-12-08 08:25:21,700 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=56.3 pTM=0.34 ipTM=0.369 tol=6.07
2024-12-08 08:25:27,692 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=56.1 pTM=0.339 ipTM=0.367 tol=5.25
2024-12-08 08:25:27,693 alphafold2_multimer_v3_model_5_seed_000 took 185.9s (30 recycles)
2024-12-08 08:25:27,871 reranking models by 'multimer' metric
2024-12-08 08:25:28,505 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-08 08:25:56,757 Relaxation took 28.9s
2024-12-08 08:25:56,757 rank_001_alphafold2_multimer_v3_model_2_seed_000 pLDDT=58.7 pTM=0.345 ipTM=0.372
2024-12-08 08:26:28,943 Relaxation took 32.2s
2024-12-08 08:26:28,943 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=56.3 pTM=0.342 ipTM=0.367
2024-12-08 08:26:53,299 Relaxation took 24.4s
2024-12-08 08:26:53,299 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=56.1 pTM=0.339 ipTM=0.367
2024-12-08 08:27:17,535 Relaxation took 24.2s
2024-12-08 08:27:17,535 rank_004_alphafold2_multimer_v3_model_3_seed_000 pLDDT=58.2 pTM=0.34 ipTM=0.366
2024-12-08 08:27:39,674 Relaxation took 22.1s
2024-12-08 08:27:39,675 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=57.3 pTM=0.336 ipTM=0.363
2024-12-08 08:27:40,695 Done