2024-12-08 08:28:28,042 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-08 08:28:28,392 Running on GPU
2024-12-08 08:28:29,251 Found 6 citations for tools or databases
2024-12-08 08:28:29,251 Query 1/1: RNF40_C19orf50 (length 1177)
2024-12-08 08:28:29,513 Sleeping for 10s. Reason: PENDING
2024-12-08 08:28:39,770 Sleeping for 7s. Reason: RUNNING
2024-12-08 08:28:47,022 Sleeping for 9s. Reason: RUNNING
2024-12-08 08:28:56,275 Sleeping for 5s. Reason: RUNNING
2024-12-08 08:29:01,529 Sleeping for 7s. Reason: RUNNING
2024-12-08 08:29:08,784 Sleeping for 8s. Reason: RUNNING
2024-12-08 08:29:17,043 Sleeping for 10s. Reason: RUNNING
2024-12-08 08:29:27,303 Sleeping for 9s. Reason: RUNNING
2024-12-08 08:29:36,568 Sleeping for 10s. Reason: RUNNING
2024-12-08 08:29:46,825 Sleeping for 8s. Reason: RUNNING
2024-12-08 08:29:55,089 Sleeping for 8s. Reason: RUNNING
2024-12-08 08:30:03,345 Sleeping for 5s. Reason: RUNNING
2024-12-08 08:30:08,605 Sleeping for 9s. Reason: RUNNING
2024-12-08 08:30:17,868 Sleeping for 5s. Reason: RUNNING
2024-12-08 08:30:24,587 Sleeping for 6s. Reason: PENDING
2024-12-08 08:30:30,847 Sleeping for 9s. Reason: RUNNING
2024-12-08 08:30:40,111 Sleeping for 6s. Reason: RUNNING
2024-12-08 08:30:46,367 Sleeping for 10s. Reason: RUNNING
2024-12-08 08:30:56,625 Sleeping for 8s. Reason: RUNNING
2024-12-08 08:31:04,877 Sleeping for 10s. Reason: RUNNING
2024-12-08 08:31:15,130 Sleeping for 5s. Reason: RUNNING
2024-12-08 08:31:20,383 Sleeping for 9s. Reason: RUNNING
2024-12-08 08:31:33,509 Setting max_seq=508, max_extra_seq=2048
2024-12-08 08:35:41,797 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=55.2 pTM=0.208 ipTM=0.135
2024-12-08 08:36:18,273 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=57.1 pTM=0.213 ipTM=0.151 tol=25.4
2024-12-08 08:36:54,858 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=55.2 pTM=0.215 ipTM=0.149 tol=19.6
2024-12-08 08:37:31,560 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=54.9 pTM=0.22 ipTM=0.139 tol=14.4
2024-12-08 08:38:08,370 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=54.5 pTM=0.224 ipTM=0.16 tol=16.2
2024-12-08 08:38:45,191 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=55.2 pTM=0.226 ipTM=0.156 tol=25.8
2024-12-08 08:39:22,041 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=54.6 pTM=0.223 ipTM=0.152 tol=12.7
2024-12-08 08:39:58,886 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=54.8 pTM=0.22 ipTM=0.141 tol=11.1
2024-12-08 08:40:35,714 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=55.3 pTM=0.228 ipTM=0.153 tol=8.16
2024-12-08 08:41:12,574 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=55.3 pTM=0.219 ipTM=0.138 tol=5.07
2024-12-08 08:41:49,417 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=55.5 pTM=0.221 ipTM=0.147 tol=7.91
2024-12-08 08:42:26,266 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=55.5 pTM=0.221 ipTM=0.135 tol=9.23
2024-12-08 08:43:03,117 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=55.2 pTM=0.226 ipTM=0.148 tol=6.58
2024-12-08 08:43:39,972 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=54.8 pTM=0.212 ipTM=0.141 tol=7.12
2024-12-08 08:44:16,814 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=54.6 pTM=0.221 ipTM=0.153 tol=5.23
2024-12-08 08:44:53,692 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=55.2 pTM=0.219 ipTM=0.141 tol=6.43
2024-12-08 08:45:30,564 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=55 pTM=0.218 ipTM=0.15 tol=4.61
2024-12-08 08:46:07,411 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=55.6 pTM=0.221 ipTM=0.149 tol=5.89
2024-12-08 08:46:44,253 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=55 pTM=0.221 ipTM=0.148 tol=4.76
2024-12-08 08:47:21,107 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=55.6 pTM=0.222 ipTM=0.145 tol=8.22
2024-12-08 08:47:57,953 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=55.5 pTM=0.219 ipTM=0.145 tol=8.38
2024-12-08 08:48:34,830 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=55.3 pTM=0.222 ipTM=0.14 tol=6.3
2024-12-08 08:49:11,714 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=55.2 pTM=0.219 ipTM=0.139 tol=7.13
2024-12-08 08:49:48,567 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=55.2 pTM=0.233 ipTM=0.15 tol=12.8
2024-12-08 08:50:25,417 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=53.6 pTM=0.215 ipTM=0.144 tol=8.84
2024-12-08 08:51:02,283 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=55 pTM=0.217 ipTM=0.137 tol=11.2
2024-12-08 08:51:39,138 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=54.9 pTM=0.218 ipTM=0.141 tol=7.73
2024-12-08 08:52:15,996 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=55.9 pTM=0.214 ipTM=0.135 tol=5.82
2024-12-08 08:52:52,871 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=54.8 pTM=0.216 ipTM=0.14 tol=10.7
2024-12-08 08:53:29,755 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=54.8 pTM=0.212 ipTM=0.142 tol=8.55
2024-12-08 08:54:06,644 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=54.9 pTM=0.214 ipTM=0.143 tol=7.34
2024-12-08 08:54:06,645 alphafold2_multimer_v3_model_1_seed_000 took 1346.2s (30 recycles)
2024-12-08 08:54:44,517 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=53.7 pTM=0.256 ipTM=0.3
2024-12-08 08:55:21,380 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=52.2 pTM=0.251 ipTM=0.314 tol=27.5
2024-12-08 08:55:58,243 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=50.3 pTM=0.264 ipTM=0.318 tol=33.4
2024-12-08 08:56:35,106 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=53.2 pTM=0.249 ipTM=0.283 tol=17.7
2024-12-08 08:57:11,984 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=53.6 pTM=0.258 ipTM=0.307 tol=22.3
2024-12-08 08:57:48,817 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=52.2 pTM=0.258 ipTM=0.314 tol=17.3
2024-12-08 08:58:25,684 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=52.8 pTM=0.254 ipTM=0.337 tol=14.4
2024-12-08 08:59:02,569 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=53.2 pTM=0.253 ipTM=0.344 tol=13.5
2024-12-08 08:59:39,443 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=53.2 pTM=0.265 ipTM=0.373 tol=8.71
2024-12-08 09:00:16,317 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=53.7 pTM=0.255 ipTM=0.338 tol=10.2
2024-12-08 09:00:53,184 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=50.8 pTM=0.246 ipTM=0.292 tol=13.4
2024-12-08 09:01:30,049 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=53.5 pTM=0.243 ipTM=0.302 tol=12
2024-12-08 09:02:06,863 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=54.6 pTM=0.246 ipTM=0.325 tol=7.47
2024-12-08 09:02:43,660 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=54.1 pTM=0.248 ipTM=0.306 tol=12.4
2024-12-08 09:03:20,502 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=54.8 pTM=0.253 ipTM=0.359 tol=9.34
2024-12-08 09:03:57,326 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=53.1 pTM=0.254 ipTM=0.357 tol=8.74
2024-12-08 09:04:34,137 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=54 pTM=0.262 ipTM=0.384 tol=5.89
2024-12-08 09:05:10,992 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=52.5 pTM=0.259 ipTM=0.38 tol=8.08
2024-12-08 09:05:47,818 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=53.7 pTM=0.258 ipTM=0.385 tol=6.27
2024-12-08 09:06:24,638 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=53.5 pTM=0.242 ipTM=0.328 tol=7.17
2024-12-08 09:07:01,482 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=53.3 pTM=0.239 ipTM=0.309 tol=7.53
2024-12-08 09:07:38,318 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=53.9 pTM=0.241 ipTM=0.274 tol=6.46
2024-12-08 09:08:15,167 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=52.8 pTM=0.239 ipTM=0.264 tol=7.36
2024-12-08 09:08:52,060 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=51.3 pTM=0.238 ipTM=0.278 tol=10.9
2024-12-08 09:09:28,921 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=54.1 pTM=0.245 ipTM=0.314 tol=9.84
2024-12-08 09:10:05,747 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=54.4 pTM=0.247 ipTM=0.337 tol=10.7
2024-12-08 09:10:42,599 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=53.4 pTM=0.251 ipTM=0.356 tol=9.7
2024-12-08 09:11:19,466 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=51.6 pTM=0.254 ipTM=0.368 tol=9.21
2024-12-08 09:11:56,333 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=55.5 pTM=0.261 ipTM=0.394 tol=11.7
2024-12-08 09:12:33,144 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=55 pTM=0.261 ipTM=0.363 tol=10.4
2024-12-08 09:13:09,998 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=51.7 pTM=0.255 ipTM=0.35 tol=13.3
2024-12-08 09:13:09,999 alphafold2_multimer_v3_model_2_seed_000 took 1142.3s (30 recycles)
2024-12-08 09:13:47,952 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=59.3 pTM=0.285 ipTM=0.404
2024-12-08 09:14:24,902 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=58.8 pTM=0.275 ipTM=0.209 tol=16.4
2024-12-08 09:15:01,832 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=58.5 pTM=0.281 ipTM=0.331 tol=17.2
2024-12-08 09:15:38,784 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=58.5 pTM=0.265 ipTM=0.199 tol=9.65
2024-12-08 09:16:15,710 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=59 pTM=0.268 ipTM=0.237 tol=6.08
2024-12-08 09:16:52,612 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=57.2 pTM=0.264 ipTM=0.214 tol=21.5
2024-12-08 09:17:29,513 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=58.2 pTM=0.264 ipTM=0.206 tol=10.9
2024-12-08 09:18:06,431 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=58.7 pTM=0.279 ipTM=0.322 tol=14.4
2024-12-08 09:18:43,310 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=59.5 pTM=0.302 ipTM=0.431 tol=12.5
2024-12-08 09:19:20,219 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=59.8 pTM=0.308 ipTM=0.482 tol=11.7
2024-12-08 09:19:57,140 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=58.7 pTM=0.277 ipTM=0.341 tol=16.1
2024-12-08 09:20:34,058 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=60.2 pTM=0.288 ipTM=0.384 tol=9.96
2024-12-08 09:21:10,978 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=58.8 pTM=0.275 ipTM=0.298 tol=8.09
2024-12-08 09:21:47,903 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=60.1 pTM=0.289 ipTM=0.38 tol=9.2
2024-12-08 09:22:24,820 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=58.5 pTM=0.272 ipTM=0.273 tol=13.5
2024-12-08 09:23:01,723 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=59.1 pTM=0.294 ipTM=0.394 tol=11.7
2024-12-08 09:23:38,648 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=58.4 pTM=0.272 ipTM=0.279 tol=9.71
2024-12-08 09:24:15,548 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=58.3 pTM=0.286 ipTM=0.383 tol=12.3
2024-12-08 09:24:52,501 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=57.8 pTM=0.261 ipTM=0.241 tol=12.6
2024-12-08 09:25:29,408 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=59 pTM=0.276 ipTM=0.332 tol=5.43
2024-12-08 09:26:06,389 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=58.5 pTM=0.263 ipTM=0.226 tol=9.77
2024-12-08 09:26:43,268 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=59.3 pTM=0.285 ipTM=0.387 tol=13.2
2024-12-08 09:27:20,142 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=60.3 pTM=0.304 ipTM=0.44 tol=8.15
2024-12-08 09:27:57,042 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=59.4 pTM=0.288 ipTM=0.388 tol=8
2024-12-08 09:28:33,981 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=57.9 pTM=0.263 ipTM=0.262 tol=10.1
2024-12-08 09:29:10,890 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=59.6 pTM=0.285 ipTM=0.389 tol=11.8
2024-12-08 09:29:47,782 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=60.5 pTM=0.304 ipTM=0.445 tol=8.27
2024-12-08 09:30:24,689 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=60.9 pTM=0.298 ipTM=0.424 tol=12
2024-12-08 09:31:01,587 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=58.9 pTM=0.292 ipTM=0.361 tol=11.1
2024-12-08 09:31:38,484 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=60.3 pTM=0.311 ipTM=0.471 tol=10.5
2024-12-08 09:32:15,386 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=58.2 pTM=0.289 ipTM=0.362 tol=10.6
2024-12-08 09:32:15,387 alphafold2_multimer_v3_model_3_seed_000 took 1144.3s (30 recycles)
2024-12-08 09:32:53,338 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=53.8 pTM=0.274 ipTM=0.338
2024-12-08 09:33:30,306 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=52.1 pTM=0.255 ipTM=0.283 tol=21.6
2024-12-08 09:34:07,359 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=50.9 pTM=0.235 ipTM=0.177 tol=15.5
2024-12-08 09:34:44,407 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=50.8 pTM=0.219 ipTM=0.18 tol=10.5
2024-12-08 09:35:21,489 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=49.8 pTM=0.203 ipTM=0.144 tol=24
2024-12-08 09:35:58,592 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=48.5 pTM=0.206 ipTM=0.139 tol=14.6
2024-12-08 09:36:35,693 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=50.3 pTM=0.208 ipTM=0.14 tol=13.9
2024-12-08 09:37:12,807 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=48.2 pTM=0.223 ipTM=0.187 tol=19.6
2024-12-08 09:37:49,881 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=49 pTM=0.225 ipTM=0.258 tol=12.6
2024-12-08 09:38:26,975 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=49.2 pTM=0.24 ipTM=0.274 tol=16.1
2024-12-08 09:39:04,069 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=50.1 pTM=0.239 ipTM=0.288 tol=8.59
2024-12-08 09:39:41,196 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=48.8 pTM=0.24 ipTM=0.269 tol=10.7
2024-12-08 09:40:18,368 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=48.8 pTM=0.229 ipTM=0.208 tol=17.1
2024-12-08 09:40:55,484 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=48.9 pTM=0.236 ipTM=0.303 tol=17.8
2024-12-08 09:41:32,614 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=50 pTM=0.226 ipTM=0.258 tol=16.3
2024-12-08 09:42:09,758 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=47.6 pTM=0.234 ipTM=0.262 tol=12.3
2024-12-08 09:42:46,904 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=49.5 pTM=0.236 ipTM=0.312 tol=11.9
2024-12-08 09:43:24,025 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=48.1 pTM=0.238 ipTM=0.24 tol=13.6
2024-12-08 09:44:01,139 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=49.1 pTM=0.225 ipTM=0.253 tol=14.9
2024-12-08 09:44:38,288 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=48 pTM=0.233 ipTM=0.227 tol=20.8
2024-12-08 09:45:15,400 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=49 pTM=0.237 ipTM=0.27 tol=16.3
2024-12-08 09:45:52,526 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=49.2 pTM=0.263 ipTM=0.352 tol=13.8
2024-12-08 09:46:29,692 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=47.7 pTM=0.236 ipTM=0.244 tol=10.5
2024-12-08 09:47:06,826 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=48.7 pTM=0.243 ipTM=0.289 tol=11.8
2024-12-08 09:47:43,966 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=47.9 pTM=0.245 ipTM=0.298 tol=12.5
2024-12-08 09:48:21,079 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=48.3 pTM=0.23 ipTM=0.217 tol=11.8
2024-12-08 09:48:58,151 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=49.1 pTM=0.25 ipTM=0.336 tol=15.5
2024-12-08 09:49:35,273 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=48 pTM=0.233 ipTM=0.224 tol=11.9
2024-12-08 09:50:12,373 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=49 pTM=0.233 ipTM=0.233 tol=14.6
2024-12-08 09:50:49,522 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=47.4 pTM=0.244 ipTM=0.267 tol=15.5
2024-12-08 09:51:26,635 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=48 pTM=0.22 ipTM=0.19 tol=16.1
2024-12-08 09:51:26,636 alphafold2_multimer_v3_model_4_seed_000 took 1150.2s (30 recycles)
2024-12-08 09:52:04,549 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=56.7 pTM=0.278 ipTM=0.372
2024-12-08 09:52:41,416 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=57.5 pTM=0.274 ipTM=0.362 tol=16.8
2024-12-08 09:53:18,286 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=56.6 pTM=0.277 ipTM=0.352 tol=8.21
2024-12-08 09:53:55,161 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=56.2 pTM=0.27 ipTM=0.302 tol=7.02
2024-12-08 09:54:32,050 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=56.5 pTM=0.266 ipTM=0.278 tol=4.52
2024-12-08 09:55:08,940 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=55.6 pTM=0.26 ipTM=0.272 tol=5.7
2024-12-08 09:55:45,854 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=55.7 pTM=0.247 ipTM=0.215 tol=3.96
2024-12-08 09:56:22,803 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=56 pTM=0.245 ipTM=0.214 tol=4.85
2024-12-08 09:56:59,718 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=55.9 pTM=0.248 ipTM=0.231 tol=3.96
2024-12-08 09:57:36,641 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=55.5 pTM=0.26 ipTM=0.245 tol=2.95
2024-12-08 09:58:13,587 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=56.5 pTM=0.241 ipTM=0.176 tol=6.34
2024-12-08 09:58:50,556 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=56.9 pTM=0.237 ipTM=0.148 tol=7.1
2024-12-08 09:59:27,541 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=56.3 pTM=0.245 ipTM=0.133 tol=13.3
2024-12-08 10:00:04,555 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=56.3 pTM=0.232 ipTM=0.134 tol=8.22
2024-12-08 10:00:41,545 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=56.5 pTM=0.232 ipTM=0.137 tol=7.27
2024-12-08 10:01:18,611 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=56.2 pTM=0.233 ipTM=0.138 tol=7.64
2024-12-08 10:01:55,581 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=56.2 pTM=0.23 ipTM=0.136 tol=8.58
2024-12-08 10:02:32,570 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=56.5 pTM=0.236 ipTM=0.14 tol=6.93
2024-12-08 10:03:09,575 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=56.6 pTM=0.234 ipTM=0.138 tol=7.57
2024-12-08 10:03:46,596 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=55.9 pTM=0.23 ipTM=0.138 tol=6.93
2024-12-08 10:04:23,561 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=56.2 pTM=0.234 ipTM=0.14 tol=6.32
2024-12-08 10:05:00,580 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=55.4 pTM=0.232 ipTM=0.135 tol=7.2
2024-12-08 10:05:37,565 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=56 pTM=0.233 ipTM=0.135 tol=6.71
2024-12-08 10:06:14,561 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=55.6 pTM=0.227 ipTM=0.135 tol=7.58
2024-12-08 10:06:51,608 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=54.4 pTM=0.241 ipTM=0.146 tol=12.2
2024-12-08 10:07:28,662 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=54.2 pTM=0.228 ipTM=0.133 tol=9.71
2024-12-08 10:08:05,697 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=54.2 pTM=0.239 ipTM=0.14 tol=10.4
2024-12-08 10:08:42,766 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=54.2 pTM=0.226 ipTM=0.16 tol=16.8
2024-12-08 10:09:19,731 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=54.8 pTM=0.251 ipTM=0.214 tol=9.64
2024-12-08 10:09:56,717 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=54.3 pTM=0.226 ipTM=0.245 tol=9.66
2024-12-08 10:10:33,636 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=55.5 pTM=0.254 ipTM=0.262 tol=9.36
2024-12-08 10:10:33,637 alphafold2_multimer_v3_model_5_seed_000 took 1145.9s (30 recycles)
2024-12-08 10:10:34,708 reranking models by 'multimer' metric
2024-12-08 10:10:36,067 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-08 10:20:41,893 Relaxation took 607.2s
2024-12-08 10:20:41,893 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=58.2 pTM=0.289 ipTM=0.362
2024-12-08 10:24:06,825 Relaxation took 204.9s
2024-12-08 10:24:06,826 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=51.7 pTM=0.255 ipTM=0.35
2024-12-08 10:26:15,853 Relaxation took 129.0s
2024-12-08 10:26:15,854 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=55.5 pTM=0.254 ipTM=0.262
2024-12-08 10:27:50,599 Relaxation took 94.7s
2024-12-08 10:27:50,599 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=48 pTM=0.22 ipTM=0.19
2024-12-08 10:29:33,181 Relaxation took 102.6s
2024-12-08 10:29:33,181 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=54.9 pTM=0.214 ipTM=0.143
2024-12-08 10:29:35,934 Done