2024-12-08 08:33:01,043 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-08 08:33:01,369 Running on GPU
2024-12-08 08:33:03,404 Found 6 citations for tools or databases
2024-12-08 08:33:03,404 Query 1/1: RNF40_EPS15L1 (length 1865)
2024-12-08 08:33:03,677 Sleeping for 8s. Reason: PENDING
2024-12-08 08:33:11,937 Sleeping for 8s. Reason: RUNNING
2024-12-08 08:33:20,206 Sleeping for 10s. Reason: RUNNING
2024-12-08 08:33:30,467 Sleeping for 7s. Reason: RUNNING
2024-12-08 08:33:37,727 Sleeping for 7s. Reason: RUNNING
2024-12-08 08:33:44,992 Sleeping for 6s. Reason: RUNNING
2024-12-08 08:33:51,249 Sleeping for 6s. Reason: RUNNING
2024-12-08 08:33:57,499 Sleeping for 10s. Reason: RUNNING
2024-12-08 08:34:07,765 Sleeping for 9s. Reason: RUNNING
2024-12-08 08:34:17,019 Sleeping for 6s. Reason: RUNNING
2024-12-08 08:34:23,277 Sleeping for 8s. Reason: RUNNING
2024-12-08 08:34:31,532 Sleeping for 5s. Reason: RUNNING
2024-12-08 08:34:36,798 Sleeping for 5s. Reason: RUNNING
2024-12-08 08:34:42,056 Sleeping for 7s. Reason: RUNNING
2024-12-08 08:34:49,313 Sleeping for 7s. Reason: RUNNING
2024-12-08 08:34:56,566 Sleeping for 5s. Reason: RUNNING
2024-12-08 08:35:01,824 Sleeping for 5s. Reason: RUNNING
2024-12-08 08:35:07,079 Sleeping for 9s. Reason: RUNNING
2024-12-08 08:35:16,343 Sleeping for 5s. Reason: RUNNING
2024-12-08 08:35:23,265 Sleeping for 6s. Reason: PENDING
2024-12-08 08:35:29,519 Sleeping for 9s. Reason: RUNNING
2024-12-08 08:35:38,780 Sleeping for 5s. Reason: RUNNING
2024-12-08 08:35:44,039 Sleeping for 10s. Reason: RUNNING
2024-12-08 08:35:54,302 Sleeping for 8s. Reason: RUNNING
2024-12-08 08:36:02,561 Sleeping for 6s. Reason: RUNNING
2024-12-08 08:36:08,821 Sleeping for 10s. Reason: RUNNING
2024-12-08 08:36:19,076 Sleeping for 9s. Reason: RUNNING
2024-12-08 08:36:28,339 Sleeping for 5s. Reason: RUNNING
2024-12-08 08:36:33,603 Sleeping for 8s. Reason: RUNNING
2024-12-08 08:36:41,867 Sleeping for 7s. Reason: RUNNING
2024-12-08 08:36:49,133 Sleeping for 9s. Reason: RUNNING
2024-12-08 08:36:58,393 Sleeping for 5s. Reason: RUNNING
2024-12-08 08:37:03,651 Sleeping for 9s. Reason: RUNNING
2024-12-08 08:37:18,183 Setting max_seq=508, max_extra_seq=2048
2024-12-08 08:42:30,495 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=51.2 pTM=0.23 ipTM=0.166
2024-12-08 08:44:42,627 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=47.3 pTM=0.218 ipTM=0.17 tol=34.4
2024-12-08 08:46:54,667 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=50.9 pTM=0.271 ipTM=0.272 tol=27.4
2024-12-08 08:49:06,518 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=51.4 pTM=0.282 ipTM=0.28 tol=13.3
2024-12-08 08:51:18,465 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=50.9 pTM=0.278 ipTM=0.273 tol=11.6
2024-12-08 08:53:30,417 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=52.3 pTM=0.28 ipTM=0.281 tol=12.8
2024-12-08 08:55:42,405 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=52.1 pTM=0.274 ipTM=0.269 tol=8.56
2024-12-08 08:57:54,315 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=51.4 pTM=0.268 ipTM=0.265 tol=13.6
2024-12-08 09:00:06,307 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=50.7 pTM=0.267 ipTM=0.261 tol=6.45
2024-12-08 09:02:18,263 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=51.4 pTM=0.27 ipTM=0.27 tol=9.27
2024-12-08 09:04:30,257 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=51.7 pTM=0.265 ipTM=0.26 tol=9.24
2024-12-08 09:06:42,376 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=50.5 pTM=0.247 ipTM=0.232 tol=9.3
2024-12-08 09:08:54,545 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=48.1 pTM=0.254 ipTM=0.226 tol=33.8
2024-12-08 09:11:06,807 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=47.9 pTM=0.246 ipTM=0.239 tol=19.2
2024-12-08 09:13:18,974 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=48.8 pTM=0.241 ipTM=0.229 tol=21.4
2024-12-08 09:15:31,219 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=48.7 pTM=0.239 ipTM=0.219 tol=31.2
2024-12-08 09:17:43,400 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=49.2 pTM=0.246 ipTM=0.233 tol=22.4
2024-12-08 09:19:55,520 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=49 pTM=0.251 ipTM=0.24 tol=16.1
2024-12-08 09:22:07,627 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=49.2 pTM=0.254 ipTM=0.245 tol=10.8
2024-12-08 09:24:19,640 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=50.6 pTM=0.27 ipTM=0.268 tol=18.8
2024-12-08 09:26:31,632 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=51.1 pTM=0.268 ipTM=0.267 tol=15.4
2024-12-08 09:28:43,533 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=50.9 pTM=0.276 ipTM=0.282 tol=25.4
2024-12-08 09:30:55,388 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=51.7 pTM=0.273 ipTM=0.278 tol=8.62
2024-12-08 09:33:07,253 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=52.5 pTM=0.283 ipTM=0.292 tol=13.7
2024-12-08 09:35:19,210 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=49.9 pTM=0.29 ipTM=0.299 tol=47
2024-12-08 09:37:31,368 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=50.4 pTM=0.272 ipTM=0.278 tol=52.4
2024-12-08 09:39:43,317 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=51.6 pTM=0.281 ipTM=0.289 tol=16.8
2024-12-08 09:41:55,225 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=51.8 pTM=0.281 ipTM=0.284 tol=11.1
2024-12-08 09:44:07,094 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=52.8 pTM=0.292 ipTM=0.303 tol=6.08
2024-12-08 09:46:18,935 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=51.9 pTM=0.281 ipTM=0.288 tol=14
2024-12-08 09:48:30,795 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=50.9 pTM=0.265 ipTM=0.268 tol=32.5
2024-12-08 09:48:30,797 alphafold2_multimer_v3_model_1_seed_000 took 4268.7s (30 recycles)
2024-12-08 09:50:45,117 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=46.2 pTM=0.222 ipTM=0.187
2024-12-08 09:52:57,418 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=49.8 pTM=0.263 ipTM=0.267 tol=40.8
2024-12-08 09:55:09,760 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=50 pTM=0.256 ipTM=0.266 tol=17.4
2024-12-08 09:57:22,060 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=49.7 pTM=0.261 ipTM=0.271 tol=21.5
2024-12-08 09:59:34,316 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=50.2 pTM=0.249 ipTM=0.255 tol=15.2
2024-12-08 10:01:46,594 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=47.9 pTM=0.224 ipTM=0.21 tol=26.2
2024-12-08 10:03:58,761 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=50.6 pTM=0.261 ipTM=0.262 tol=45.1
2024-12-08 10:06:10,742 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=49.5 pTM=0.257 ipTM=0.251 tol=15.8
2024-12-08 10:08:23,019 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=46.6 pTM=0.214 ipTM=0.174 tol=25.7
2024-12-08 10:10:35,097 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=48.8 pTM=0.241 ipTM=0.226 tol=17.6
2024-12-08 10:12:47,324 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=47 pTM=0.238 ipTM=0.222 tol=32.4
2024-12-08 10:14:59,618 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=47.5 pTM=0.227 ipTM=0.201 tol=16.7
2024-12-08 10:17:11,611 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=50.5 pTM=0.271 ipTM=0.275 tol=40.5
2024-12-08 10:19:23,487 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=50.8 pTM=0.274 ipTM=0.276 tol=14.3
2024-12-08 10:21:35,335 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=50.1 pTM=0.259 ipTM=0.256 tol=8.21
2024-12-08 10:23:47,332 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=48.1 pTM=0.229 ipTM=0.211 tol=13
2024-12-08 10:25:59,673 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=49.8 pTM=0.251 ipTM=0.252 tol=43.9
2024-12-08 10:28:11,926 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=50.5 pTM=0.25 ipTM=0.255 tol=14.2
2024-12-08 10:30:24,291 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=48.3 pTM=0.227 ipTM=0.208 tol=21.9
2024-12-08 10:32:36,529 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=50.6 pTM=0.267 ipTM=0.269 tol=40.7
2024-12-08 10:34:48,512 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=49.1 pTM=0.243 ipTM=0.236 tol=14.1
2024-12-08 10:37:00,750 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=49.1 pTM=0.243 ipTM=0.237 tol=36.8
2024-12-08 10:39:12,955 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=49.5 pTM=0.242 ipTM=0.245 tol=22.6
2024-12-08 10:41:25,111 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=47.6 pTM=0.22 ipTM=0.195 tol=18.2
2024-12-08 10:43:37,327 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=47.6 pTM=0.216 ipTM=0.193 tol=13
2024-12-08 10:45:49,468 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=47.2 pTM=0.226 ipTM=0.197 tol=19.8
2024-12-08 10:48:01,524 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=48.8 pTM=0.249 ipTM=0.24 tol=11
2024-12-08 10:50:13,712 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=48.9 pTM=0.248 ipTM=0.242 tol=14.4
2024-12-08 10:52:25,974 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=48.4 pTM=0.232 ipTM=0.218 tol=14.5
2024-12-08 10:54:38,371 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=48.7 pTM=0.245 ipTM=0.24 tol=40.6
2024-12-08 10:56:50,711 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=46.6 pTM=0.22 ipTM=0.184 tol=36.1
2024-12-08 10:56:50,713 alphafold2_multimer_v3_model_2_seed_000 took 4097.9s (30 recycles)
2024-12-08 10:59:04,987 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=52.8 pTM=0.26 ipTM=0.259
2024-12-08 11:01:17,346 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=54.2 pTM=0.278 ipTM=0.275 tol=38.1
2024-12-08 11:03:29,519 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=54.6 pTM=0.275 ipTM=0.278 tol=18
2024-12-08 11:05:41,734 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=53.8 pTM=0.27 ipTM=0.276 tol=13.5
2024-12-08 11:07:53,937 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=54.2 pTM=0.27 ipTM=0.273 tol=12
2024-12-08 11:10:06,134 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=54.4 pTM=0.271 ipTM=0.276 tol=12.6
2024-12-08 11:12:18,361 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=54.6 pTM=0.273 ipTM=0.288 tol=8.2
2024-12-08 11:14:30,608 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=54.5 pTM=0.273 ipTM=0.287 tol=8.64
2024-12-08 11:16:42,840 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=54.4 pTM=0.271 ipTM=0.286 tol=5.08
2024-12-08 11:18:55,050 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=54.6 pTM=0.277 ipTM=0.289 tol=6.95
2024-12-08 11:21:07,326 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=54.6 pTM=0.273 ipTM=0.289 tol=14
2024-12-08 11:23:19,591 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=54.5 pTM=0.276 ipTM=0.292 tol=12
2024-12-08 11:25:31,852 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=54.6 pTM=0.272 ipTM=0.29 tol=9.23
2024-12-08 11:27:44,188 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=54.9 pTM=0.279 ipTM=0.298 tol=13.4
2024-12-08 11:29:56,559 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=54.1 pTM=0.275 ipTM=0.291 tol=12.2
2024-12-08 11:32:08,907 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=53.8 pTM=0.274 ipTM=0.288 tol=5.59
2024-12-08 11:34:21,190 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=54.3 pTM=0.272 ipTM=0.286 tol=5.43
2024-12-08 11:36:33,530 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=54.3 pTM=0.273 ipTM=0.282 tol=7.13
2024-12-08 11:38:45,812 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=54.5 pTM=0.271 ipTM=0.283 tol=15.5
2024-12-08 11:40:58,145 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=54.3 pTM=0.27 ipTM=0.276 tol=5.95
2024-12-08 11:43:10,486 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=54 pTM=0.27 ipTM=0.282 tol=10.1
2024-12-08 11:45:22,730 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=54.2 pTM=0.271 ipTM=0.283 tol=6.12
2024-12-08 11:47:35,029 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=54.2 pTM=0.273 ipTM=0.29 tol=6.3
2024-12-08 11:49:47,313 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=54.6 pTM=0.275 ipTM=0.292 tol=4.89
2024-12-08 11:51:59,585 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=54.4 pTM=0.271 ipTM=0.286 tol=5.73
2024-12-08 11:54:11,907 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=54.3 pTM=0.269 ipTM=0.279 tol=6.29
2024-12-08 11:56:24,253 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=54.4 pTM=0.27 ipTM=0.283 tol=7.43
2024-12-08 11:58:36,641 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=54.3 pTM=0.272 ipTM=0.276 tol=4.99
2024-12-08 12:00:49,029 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=54.6 pTM=0.271 ipTM=0.288 tol=6.1
2024-12-08 12:03:01,370 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=54.4 pTM=0.272 ipTM=0.281 tol=5.96
2024-12-08 12:05:13,653 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=54.5 pTM=0.269 ipTM=0.284 tol=16.7
2024-12-08 12:05:13,655 alphafold2_multimer_v3_model_3_seed_000 took 4100.9s (30 recycles)
2024-12-08 12:07:28,561 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=47.6 pTM=0.22 ipTM=0.212
2024-12-08 12:09:41,371 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=46.5 pTM=0.214 ipTM=0.21 tol=24.6
2024-12-08 12:11:54,169 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=47 pTM=0.226 ipTM=0.217 tol=34.6
2024-12-08 12:14:07,006 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=46.1 pTM=0.216 ipTM=0.213 tol=26.6
2024-12-08 12:16:19,769 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=48.1 pTM=0.232 ipTM=0.228 tol=34.7
2024-12-08 12:18:32,428 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=47.9 pTM=0.229 ipTM=0.223 tol=16.2
2024-12-08 12:20:45,067 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=48.5 pTM=0.223 ipTM=0.217 tol=15.1
2024-12-08 12:22:57,823 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=47.9 pTM=0.225 ipTM=0.221 tol=10
2024-12-08 12:25:10,432 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=48.6 pTM=0.227 ipTM=0.224 tol=11.1
2024-12-08 12:27:23,033 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=48.6 pTM=0.237 ipTM=0.241 tol=9.09
2024-12-08 12:29:35,652 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=48.1 pTM=0.233 ipTM=0.235 tol=20
2024-12-08 12:31:48,284 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=48 pTM=0.227 ipTM=0.224 tol=16.8
2024-12-08 12:34:00,999 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=47.6 pTM=0.226 ipTM=0.223 tol=19.5
2024-12-08 12:36:13,619 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=47.1 pTM=0.225 ipTM=0.216 tol=17
2024-12-08 12:38:26,487 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=45.9 pTM=0.211 ipTM=0.204 tol=18.5
2024-12-08 12:40:39,132 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=46.7 pTM=0.217 ipTM=0.211 tol=19.8
2024-12-08 12:42:51,939 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=46.1 pTM=0.216 ipTM=0.206 tol=23.8
2024-12-08 12:45:04,589 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=45.8 pTM=0.23 ipTM=0.217 tol=21.1
2024-12-08 12:47:17,175 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=47.2 pTM=0.241 ipTM=0.244 tol=11.9
2024-12-08 12:49:29,716 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=46.9 pTM=0.228 ipTM=0.222 tol=12.2
2024-12-08 12:51:42,601 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=46.1 pTM=0.219 ipTM=0.215 tol=10.5
2024-12-08 12:53:55,189 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=46.5 pTM=0.229 ipTM=0.222 tol=10.5
2024-12-08 12:56:07,916 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=45.8 pTM=0.231 ipTM=0.224 tol=16.2
2024-12-08 12:58:20,627 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=45.4 pTM=0.218 ipTM=0.211 tol=14.2
2024-12-08 13:00:33,461 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=45.1 pTM=0.217 ipTM=0.207 tol=17.7
2024-12-08 13:02:46,190 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=45.2 pTM=0.22 ipTM=0.212 tol=17.5
2024-12-08 13:04:58,956 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=45.7 pTM=0.228 ipTM=0.226 tol=12.2
2024-12-08 13:07:11,766 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=45.1 pTM=0.218 ipTM=0.218 tol=13.9
2024-12-08 13:09:24,544 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=46.8 pTM=0.237 ipTM=0.236 tol=14.2
2024-12-08 13:11:37,061 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=47.4 pTM=0.235 ipTM=0.233 tol=16.3
2024-12-08 13:13:49,701 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=44.9 pTM=0.214 ipTM=0.207 tol=16.3
2024-12-08 13:13:49,703 alphafold2_multimer_v3_model_4_seed_000 took 4114.0s (30 recycles)
2024-12-08 13:16:04,353 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=51.6 pTM=0.253 ipTM=0.163
2024-12-08 13:18:17,096 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=50.1 pTM=0.259 ipTM=0.262 tol=63.3
2024-12-08 13:20:29,561 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=50.8 pTM=0.266 ipTM=0.264 tol=15.3
2024-12-08 13:22:42,110 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=50.3 pTM=0.269 ipTM=0.268 tol=13.9
2024-12-08 13:24:54,482 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=50.6 pTM=0.273 ipTM=0.269 tol=12.1
2024-12-08 13:27:07,007 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=50.6 pTM=0.271 ipTM=0.273 tol=10.2
2024-12-08 13:29:19,486 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=51.3 pTM=0.272 ipTM=0.272 tol=12.2
2024-12-08 13:31:32,029 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=51.4 pTM=0.269 ipTM=0.275 tol=14.4
2024-12-08 13:33:44,639 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=50.1 pTM=0.269 ipTM=0.277 tol=50.9
2024-12-08 13:35:57,307 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=48.5 pTM=0.258 ipTM=0.257 tol=64.2
2024-12-08 13:38:09,921 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=50.1 pTM=0.262 ipTM=0.26 tol=29.4
2024-12-08 13:40:22,447 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=50.6 pTM=0.261 ipTM=0.261 tol=26.4
2024-12-08 13:42:34,843 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=51.2 pTM=0.27 ipTM=0.28 tol=45.5
2024-12-08 13:44:47,325 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=51.4 pTM=0.267 ipTM=0.271 tol=12
2024-12-08 13:46:59,721 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=51.3 pTM=0.267 ipTM=0.273 tol=12.2
2024-12-08 13:49:11,890 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=54.1 pTM=0.303 ipTM=0.314 tol=20.8
2024-12-08 13:51:23,981 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=55.3 pTM=0.333 ipTM=0.346 tol=17
2024-12-08 13:53:36,031 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=55.9 pTM=0.339 ipTM=0.347 tol=11.3
2024-12-08 13:55:48,072 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=55.9 pTM=0.341 ipTM=0.35 tol=8.45
2024-12-08 13:58:00,105 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=55.6 pTM=0.339 ipTM=0.35 tol=8.04
2024-12-08 14:00:12,143 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=55.7 pTM=0.339 ipTM=0.348 tol=4.6
2024-12-08 14:02:24,190 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=55.8 pTM=0.341 ipTM=0.347 tol=8.14
2024-12-08 14:04:36,199 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=55.7 pTM=0.337 ipTM=0.352 tol=9.05
2024-12-08 14:06:48,230 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=55.9 pTM=0.339 ipTM=0.349 tol=4.42
2024-12-08 14:09:00,215 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=56.1 pTM=0.34 ipTM=0.349 tol=4.36
2024-12-08 14:11:12,170 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=55.9 pTM=0.341 ipTM=0.348 tol=3.88
2024-12-08 14:13:24,130 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=55.9 pTM=0.341 ipTM=0.351 tol=8.09
2024-12-08 14:15:36,176 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=56 pTM=0.338 ipTM=0.35 tol=6.32
2024-12-08 14:17:48,250 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=56.1 pTM=0.339 ipTM=0.355 tol=4.11
2024-12-08 14:20:00,253 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=55.9 pTM=0.34 ipTM=0.351 tol=5.61
2024-12-08 14:22:12,237 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=55.9 pTM=0.34 ipTM=0.354 tol=5.23
2024-12-08 14:22:12,239 alphafold2_multimer_v3_model_5_seed_000 took 4100.5s (30 recycles)
2024-12-08 14:22:14,262 reranking models by 'multimer' metric
2024-12-08 14:22:16,153 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-08 14:28:21,092 Relaxation took 366.8s
2024-12-08 14:28:21,092 rank_001_alphafold2_multimer_v3_model_5_seed_000 pLDDT=55.9 pTM=0.34 ipTM=0.354
2024-12-08 14:33:51,484 Relaxation took 330.4s
2024-12-08 14:33:51,484 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=54.5 pTM=0.269 ipTM=0.284
2024-12-08 14:40:13,790 Relaxation took 382.3s
2024-12-08 14:40:13,790 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=50.9 pTM=0.265 ipTM=0.268
2024-12-08 14:54:02,112 Relaxation took 828.3s
2024-12-08 14:54:02,112 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=44.9 pTM=0.214 ipTM=0.207
2024-12-08 14:58:37,357 Relaxation took 275.2s
2024-12-08 14:58:37,357 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=46.6 pTM=0.22 ipTM=0.184
2024-12-08 14:58:41,797 Done