2024-12-08 08:37:27,635 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-08 08:37:27,957 Running on GPU
2024-12-08 08:37:30,212 Found 6 citations for tools or databases
2024-12-08 08:37:30,212 Query 1/1: RNF40_G0S2 (length 1104)
2024-12-08 08:37:30,496 Sleeping for 5s. Reason: PENDING
2024-12-08 08:37:35,745 Sleeping for 8s. Reason: PENDING
2024-12-08 08:37:44,008 Sleeping for 6s. Reason: RUNNING
2024-12-08 08:37:50,269 Sleeping for 9s. Reason: RUNNING
2024-12-08 08:37:59,526 Sleeping for 10s. Reason: RUNNING
2024-12-08 08:38:09,796 Sleeping for 8s. Reason: RUNNING
2024-12-08 08:38:18,061 Sleeping for 5s. Reason: RUNNING
2024-12-08 08:38:23,321 Sleeping for 10s. Reason: RUNNING
2024-12-08 08:38:33,579 Sleeping for 9s. Reason: RUNNING
2024-12-08 08:38:42,838 Sleeping for 10s. Reason: RUNNING
2024-12-08 08:38:53,090 Sleeping for 7s. Reason: RUNNING
2024-12-08 08:39:00,351 Sleeping for 9s. Reason: RUNNING
2024-12-08 08:39:09,606 Sleeping for 7s. Reason: RUNNING
2024-12-08 08:39:16,866 Sleeping for 8s. Reason: RUNNING
2024-12-08 08:39:25,124 Sleeping for 6s. Reason: RUNNING
2024-12-08 08:39:31,377 Sleeping for 7s. Reason: RUNNING
2024-12-08 08:39:38,628 Sleeping for 5s. Reason: RUNNING
2024-12-08 08:39:45,384 Sleeping for 7s. Reason: PENDING
2024-12-08 08:39:52,635 Sleeping for 5s. Reason: RUNNING
2024-12-08 08:39:57,888 Sleeping for 9s. Reason: RUNNING
2024-12-08 08:40:07,143 Sleeping for 7s. Reason: RUNNING
2024-12-08 08:40:14,402 Sleeping for 10s. Reason: RUNNING
2024-12-08 08:40:24,661 Sleeping for 10s. Reason: RUNNING
2024-12-08 08:40:34,928 Sleeping for 9s. Reason: RUNNING
2024-12-08 08:40:47,145 Setting max_seq=508, max_extra_seq=2048
2024-12-08 08:43:04,744 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=57.4 pTM=0.25 ipTM=0.313
2024-12-08 08:43:28,098 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=56.7 pTM=0.248 ipTM=0.326 tol=13.5
2024-12-08 08:43:51,572 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=58.2 pTM=0.251 ipTM=0.301 tol=13.2
2024-12-08 08:44:15,064 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=57.7 pTM=0.248 ipTM=0.313 tol=9.77
2024-12-08 08:44:38,612 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=57.4 pTM=0.251 ipTM=0.311 tol=7.46
2024-12-08 08:45:02,239 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=56.7 pTM=0.251 ipTM=0.302 tol=5.97
2024-12-08 08:45:25,900 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=57.9 pTM=0.254 ipTM=0.299 tol=8
2024-12-08 08:45:49,597 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=57.6 pTM=0.251 ipTM=0.308 tol=7.25
2024-12-08 08:46:13,340 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=57 pTM=0.236 ipTM=0.294 tol=10.4
2024-12-08 08:46:37,143 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=56.9 pTM=0.242 ipTM=0.29 tol=5.15
2024-12-08 08:47:00,948 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=56.5 pTM=0.249 ipTM=0.279 tol=6.9
2024-12-08 08:47:24,736 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=56.9 pTM=0.247 ipTM=0.286 tol=5.37
2024-12-08 08:47:48,513 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=56.7 pTM=0.246 ipTM=0.286 tol=6.01
2024-12-08 08:48:12,293 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=56.9 pTM=0.245 ipTM=0.296 tol=6.09
2024-12-08 08:48:36,112 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=57.3 pTM=0.243 ipTM=0.281 tol=5.08
2024-12-08 08:48:59,891 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=58.3 pTM=0.25 ipTM=0.301 tol=4.11
2024-12-08 08:49:23,689 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=57 pTM=0.247 ipTM=0.287 tol=6.99
2024-12-08 08:49:47,463 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=57.5 pTM=0.248 ipTM=0.299 tol=6.76
2024-12-08 08:50:11,281 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=56.9 pTM=0.247 ipTM=0.281 tol=4.23
2024-12-08 08:50:35,087 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=57.6 pTM=0.248 ipTM=0.291 tol=4.8
2024-12-08 08:50:58,915 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=56.7 pTM=0.25 ipTM=0.283 tol=5.19
2024-12-08 08:51:22,748 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=57.7 pTM=0.248 ipTM=0.303 tol=3.91
2024-12-08 08:51:46,580 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=57.3 pTM=0.253 ipTM=0.281 tol=4.89
2024-12-08 08:52:10,427 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=57.3 pTM=0.253 ipTM=0.294 tol=5.78
2024-12-08 08:52:34,257 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=57.4 pTM=0.256 ipTM=0.282 tol=4.26
2024-12-08 08:52:58,081 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=57.9 pTM=0.249 ipTM=0.294 tol=6.3
2024-12-08 08:53:21,905 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=57.6 pTM=0.25 ipTM=0.282 tol=5.25
2024-12-08 08:53:45,723 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=57.9 pTM=0.256 ipTM=0.301 tol=3.61
2024-12-08 08:54:09,548 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=58.2 pTM=0.254 ipTM=0.282 tol=3.65
2024-12-08 08:54:33,381 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=57.8 pTM=0.253 ipTM=0.289 tol=2.94
2024-12-08 08:54:57,195 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=57.8 pTM=0.252 ipTM=0.282 tol=3.78
2024-12-08 08:54:57,196 alphafold2_multimer_v3_model_1_seed_000 took 845.1s (30 recycles)
2024-12-08 08:55:21,652 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=56.5 pTM=0.259 ipTM=0.202
2024-12-08 08:55:45,289 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=56.8 pTM=0.268 ipTM=0.194 tol=33.2
2024-12-08 08:56:08,959 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=56.7 pTM=0.262 ipTM=0.207 tol=5.93
2024-12-08 08:56:32,616 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=55.5 pTM=0.263 ipTM=0.227 tol=8.39
2024-12-08 08:56:56,337 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=54.9 pTM=0.248 ipTM=0.261 tol=3.88
2024-12-08 08:57:20,022 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=53.6 pTM=0.239 ipTM=0.267 tol=2.89
2024-12-08 08:57:43,738 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=54.9 pTM=0.255 ipTM=0.242 tol=3.43
2024-12-08 08:58:07,475 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=54.1 pTM=0.248 ipTM=0.263 tol=6.7
2024-12-08 08:58:31,204 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=55.4 pTM=0.256 ipTM=0.267 tol=5.58
2024-12-08 08:58:54,911 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=54.9 pTM=0.253 ipTM=0.228 tol=3.21
2024-12-08 08:59:18,622 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=55.6 pTM=0.256 ipTM=0.233 tol=3.11
2024-12-08 08:59:42,337 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=55.3 pTM=0.255 ipTM=0.242 tol=5.5
2024-12-08 09:00:06,061 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=55.4 pTM=0.255 ipTM=0.257 tol=3.49
2024-12-08 09:00:29,806 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=55 pTM=0.254 ipTM=0.223 tol=2.46
2024-12-08 09:00:53,559 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=54.8 pTM=0.244 ipTM=0.258 tol=5.96
2024-12-08 09:01:17,286 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=55.8 pTM=0.253 ipTM=0.242 tol=2.89
2024-12-08 09:01:41,049 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=54.1 pTM=0.245 ipTM=0.261 tol=5.99
2024-12-08 09:02:04,788 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=55.1 pTM=0.252 ipTM=0.255 tol=6.13
2024-12-08 09:02:28,554 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=54.5 pTM=0.244 ipTM=0.242 tol=3.62
2024-12-08 09:02:52,324 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=53.7 pTM=0.236 ipTM=0.253 tol=4.07
2024-12-08 09:03:16,097 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=54.1 pTM=0.24 ipTM=0.264 tol=4.8
2024-12-08 09:03:39,845 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=54.8 pTM=0.247 ipTM=0.253 tol=3.23
2024-12-08 09:04:03,575 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=55 pTM=0.25 ipTM=0.279 tol=3.87
2024-12-08 09:04:27,287 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=54.9 pTM=0.251 ipTM=0.274 tol=4.64
2024-12-08 09:04:51,007 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=55.5 pTM=0.254 ipTM=0.25 tol=4.63
2024-12-08 09:05:14,728 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=55.9 pTM=0.258 ipTM=0.246 tol=4.48
2024-12-08 09:05:38,423 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=56.1 pTM=0.256 ipTM=0.27 tol=3.01
2024-12-08 09:06:02,142 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=55.3 pTM=0.257 ipTM=0.258 tol=2.08
2024-12-08 09:06:25,859 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=56.4 pTM=0.258 ipTM=0.272 tol=2.03
2024-12-08 09:06:49,546 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=55.1 pTM=0.257 ipTM=0.27 tol=2.7
2024-12-08 09:07:13,244 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=56.1 pTM=0.26 ipTM=0.245 tol=3.92
2024-12-08 09:07:13,245 alphafold2_multimer_v3_model_2_seed_000 took 735.3s (30 recycles)
2024-12-08 09:07:37,805 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=61.5 pTM=0.277 ipTM=0.307
2024-12-08 09:08:01,614 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=60.7 pTM=0.272 ipTM=0.278 tol=13.7
2024-12-08 09:08:25,418 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=60.1 pTM=0.272 ipTM=0.265 tol=13.2
2024-12-08 09:08:49,217 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=59.1 pTM=0.266 ipTM=0.261 tol=6.95
2024-12-08 09:09:13,011 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=59.5 pTM=0.275 ipTM=0.314 tol=6.33
2024-12-08 09:09:36,816 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=58.6 pTM=0.261 ipTM=0.239 tol=4.96
2024-12-08 09:10:00,604 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=59.3 pTM=0.261 ipTM=0.248 tol=7.21
2024-12-08 09:10:24,373 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=59.2 pTM=0.262 ipTM=0.227 tol=4.62
2024-12-08 09:10:48,189 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=58.9 pTM=0.259 ipTM=0.191 tol=5.6
2024-12-08 09:11:11,957 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=58.7 pTM=0.265 ipTM=0.231 tol=11.5
2024-12-08 09:11:35,736 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=60.2 pTM=0.271 ipTM=0.306 tol=11.5
2024-12-08 09:11:59,503 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=58.3 pTM=0.266 ipTM=0.339 tol=6.91
2024-12-08 09:12:23,293 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=57.4 pTM=0.262 ipTM=0.263 tol=9.46
2024-12-08 09:12:47,103 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=58.1 pTM=0.263 ipTM=0.252 tol=8.16
2024-12-08 09:13:10,900 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=56.4 pTM=0.26 ipTM=0.24 tol=8.98
2024-12-08 09:13:34,709 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=58.2 pTM=0.264 ipTM=0.234 tol=8.46
2024-12-08 09:13:58,578 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=56.2 pTM=0.26 ipTM=0.213 tol=8.07
2024-12-08 09:14:22,427 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=57.5 pTM=0.261 ipTM=0.233 tol=11.2
2024-12-08 09:14:46,267 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=57.2 pTM=0.272 ipTM=0.304 tol=12
2024-12-08 09:15:10,089 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=57.7 pTM=0.27 ipTM=0.278 tol=8.69
2024-12-08 09:15:33,954 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=56.8 pTM=0.263 ipTM=0.257 tol=9.96
2024-12-08 09:15:57,786 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=58 pTM=0.266 ipTM=0.262 tol=8.52
2024-12-08 09:16:21,605 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=57.3 pTM=0.266 ipTM=0.282 tol=8.87
2024-12-08 09:16:45,456 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=58 pTM=0.266 ipTM=0.264 tol=8.3
2024-12-08 09:17:09,299 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=56.9 pTM=0.259 ipTM=0.23 tol=9.07
2024-12-08 09:17:33,129 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=58.4 pTM=0.268 ipTM=0.273 tol=9.12
2024-12-08 09:17:56,943 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=57.3 pTM=0.269 ipTM=0.298 tol=7.91
2024-12-08 09:18:20,736 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=58.3 pTM=0.27 ipTM=0.287 tol=10.5
2024-12-08 09:18:44,531 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=56.7 pTM=0.261 ipTM=0.25 tol=9.42
2024-12-08 09:19:08,329 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=57.9 pTM=0.27 ipTM=0.276 tol=7.19
2024-12-08 09:19:32,141 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=57.5 pTM=0.271 ipTM=0.292 tol=8.59
2024-12-08 09:19:32,142 alphafold2_multimer_v3_model_3_seed_000 took 738.1s (30 recycles)
2024-12-08 09:19:56,733 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=54.4 pTM=0.247 ipTM=0.298
2024-12-08 09:20:20,628 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=54.3 pTM=0.252 ipTM=0.31 tol=19.2
2024-12-08 09:20:44,497 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=51.8 pTM=0.244 ipTM=0.296 tol=16.6
2024-12-08 09:21:08,341 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=52.5 pTM=0.249 ipTM=0.32 tol=12.3
2024-12-08 09:21:32,172 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=54.4 pTM=0.243 ipTM=0.295 tol=8.05
2024-12-08 09:21:55,971 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=53.7 pTM=0.243 ipTM=0.287 tol=9.04
2024-12-08 09:22:19,813 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=52.4 pTM=0.24 ipTM=0.273 tol=11.8
2024-12-08 09:22:43,666 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=52.2 pTM=0.245 ipTM=0.299 tol=7.99
2024-12-08 09:23:07,526 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=53.8 pTM=0.245 ipTM=0.298 tol=8.7
2024-12-08 09:23:31,351 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=53.3 pTM=0.243 ipTM=0.3 tol=5.34
2024-12-08 09:23:55,207 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=51.5 pTM=0.243 ipTM=0.288 tol=9.78
2024-12-08 09:24:19,040 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=52.2 pTM=0.241 ipTM=0.285 tol=8.62
2024-12-08 09:24:42,884 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=53 pTM=0.246 ipTM=0.383 tol=8.22
2024-12-08 09:25:06,719 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=53.2 pTM=0.239 ipTM=0.357 tol=7.45
2024-12-08 09:25:30,612 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=51.9 pTM=0.242 ipTM=0.307 tol=9.8
2024-12-08 09:25:54,445 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=52.7 pTM=0.238 ipTM=0.299 tol=7.12
2024-12-08 09:26:18,339 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=51.3 pTM=0.242 ipTM=0.297 tol=7.9
2024-12-08 09:26:42,196 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=51.9 pTM=0.246 ipTM=0.335 tol=9.48
2024-12-08 09:27:06,097 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=50.6 pTM=0.248 ipTM=0.316 tol=7.32
2024-12-08 09:27:29,975 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=51.6 pTM=0.241 ipTM=0.341 tol=8.98
2024-12-08 09:27:53,893 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=50.5 pTM=0.249 ipTM=0.339 tol=9.92
2024-12-08 09:28:17,762 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=51.4 pTM=0.243 ipTM=0.358 tol=9.58
2024-12-08 09:28:41,677 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=50.8 pTM=0.249 ipTM=0.342 tol=9.36
2024-12-08 09:29:05,513 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=51.6 pTM=0.244 ipTM=0.352 tol=8.29
2024-12-08 09:29:29,409 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=51.2 pTM=0.248 ipTM=0.337 tol=8.08
2024-12-08 09:29:53,271 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=52.2 pTM=0.25 ipTM=0.35 tol=8.1
2024-12-08 09:30:17,185 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=51.2 pTM=0.251 ipTM=0.355 tol=10.3
2024-12-08 09:30:41,018 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=52.8 pTM=0.249 ipTM=0.352 tol=10.5
2024-12-08 09:31:04,919 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=51.3 pTM=0.25 ipTM=0.345 tol=11.1
2024-12-08 09:31:28,758 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=52.5 pTM=0.25 ipTM=0.369 tol=10.7
2024-12-08 09:31:52,681 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=50.7 pTM=0.25 ipTM=0.353 tol=9.19
2024-12-08 09:31:52,682 alphafold2_multimer_v3_model_4_seed_000 took 739.8s (30 recycles)
2024-12-08 09:32:17,156 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=58.2 pTM=0.271 ipTM=0.281
2024-12-08 09:32:40,857 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=59.7 pTM=0.288 ipTM=0.292 tol=9.02
2024-12-08 09:33:04,571 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=58.8 pTM=0.276 ipTM=0.261 tol=6.63
2024-12-08 09:33:28,254 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=60.3 pTM=0.281 ipTM=0.396 tol=5.34
2024-12-08 09:33:51,986 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=59.3 pTM=0.273 ipTM=0.385 tol=5.02
2024-12-08 09:34:15,707 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=59.8 pTM=0.277 ipTM=0.375 tol=4.98
2024-12-08 09:34:39,407 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=59.2 pTM=0.274 ipTM=0.37 tol=4.95
2024-12-08 09:35:03,119 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=59.5 pTM=0.267 ipTM=0.372 tol=6.51
2024-12-08 09:35:26,847 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=59.6 pTM=0.271 ipTM=0.372 tol=5.04
2024-12-08 09:35:50,554 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=59.9 pTM=0.28 ipTM=0.367 tol=5.1
2024-12-08 09:36:14,278 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=59.4 pTM=0.273 ipTM=0.365 tol=4.84
2024-12-08 09:36:38,006 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=59.3 pTM=0.266 ipTM=0.374 tol=4.21
2024-12-08 09:37:01,757 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=59.8 pTM=0.273 ipTM=0.379 tol=4.13
2024-12-08 09:37:25,499 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=60.1 pTM=0.275 ipTM=0.375 tol=3.62
2024-12-08 09:37:49,250 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=59.6 pTM=0.275 ipTM=0.369 tol=5
2024-12-08 09:38:12,984 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=60.2 pTM=0.277 ipTM=0.377 tol=5.13
2024-12-08 09:38:36,726 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=60.1 pTM=0.273 ipTM=0.375 tol=4.19
2024-12-08 09:39:00,474 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=59.7 pTM=0.265 ipTM=0.37 tol=3.86
2024-12-08 09:39:24,219 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=59.3 pTM=0.267 ipTM=0.321 tol=2.66
2024-12-08 09:39:47,958 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=60.1 pTM=0.271 ipTM=0.394 tol=3.82
2024-12-08 09:40:11,721 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=59.5 pTM=0.27 ipTM=0.378 tol=3.42
2024-12-08 09:40:35,472 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=60.3 pTM=0.271 ipTM=0.396 tol=3.37
2024-12-08 09:40:59,236 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=59.6 pTM=0.271 ipTM=0.383 tol=3.52
2024-12-08 09:41:22,975 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=59.8 pTM=0.273 ipTM=0.394 tol=3.46
2024-12-08 09:41:46,716 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=59.3 pTM=0.268 ipTM=0.393 tol=6.68
2024-12-08 09:42:10,461 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=58.9 pTM=0.27 ipTM=0.379 tol=6.9
2024-12-08 09:42:34,221 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=58.4 pTM=0.266 ipTM=0.384 tol=5.38
2024-12-08 09:42:57,986 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=58.8 pTM=0.267 ipTM=0.382 tol=10.2
2024-12-08 09:43:21,776 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=58.6 pTM=0.262 ipTM=0.368 tol=7.07
2024-12-08 09:43:45,536 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=59.1 pTM=0.268 ipTM=0.387 tol=3.14
2024-12-08 09:44:09,316 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=59.3 pTM=0.26 ipTM=0.386 tol=7.03
2024-12-08 09:44:09,316 alphafold2_multimer_v3_model_5_seed_000 took 735.9s (30 recycles)
2024-12-08 09:44:10,056 reranking models by 'multimer' metric
2024-12-08 09:44:12,552 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-08 09:45:35,888 Relaxation took 85.8s
2024-12-08 09:45:35,889 rank_001_alphafold2_multimer_v3_model_5_seed_000 pLDDT=59.3 pTM=0.26 ipTM=0.386
2024-12-08 09:46:49,082 Relaxation took 73.2s
2024-12-08 09:46:49,082 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=50.7 pTM=0.25 ipTM=0.353
2024-12-08 09:48:13,876 Relaxation took 84.8s
2024-12-08 09:48:13,876 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=57.5 pTM=0.271 ipTM=0.292
2024-12-08 09:49:41,958 Relaxation took 88.1s
2024-12-08 09:49:41,958 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=57.8 pTM=0.252 ipTM=0.282
2024-12-08 09:51:45,826 Relaxation took 123.9s
2024-12-08 09:51:45,826 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=56.1 pTM=0.26 ipTM=0.245
2024-12-08 09:51:47,866 Done