2024-12-08 08:54:22,572 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-08 08:54:22,891 Running on GPU
2024-12-08 08:54:26,317 Found 6 citations for tools or databases
2024-12-08 08:54:26,317 Query 1/1: RNF40_MEIR5 (length 1246)
2024-12-08 08:54:26,607 Sleeping for 9s. Reason: PENDING
2024-12-08 08:54:35,870 Sleeping for 8s. Reason: RUNNING
2024-12-08 08:54:44,132 Sleeping for 10s. Reason: RUNNING
2024-12-08 08:54:54,391 Sleeping for 10s. Reason: RUNNING
2024-12-08 08:55:04,660 Sleeping for 10s. Reason: RUNNING
2024-12-08 08:55:14,921 Sleeping for 6s. Reason: RUNNING
2024-12-08 08:55:21,175 Sleeping for 10s. Reason: RUNNING
2024-12-08 08:55:31,434 Sleeping for 10s. Reason: RUNNING
2024-12-08 08:55:41,698 Sleeping for 9s. Reason: RUNNING
2024-12-08 08:55:51,103 Sleeping for 5s. Reason: RUNNING
2024-12-08 08:55:56,353 Sleeping for 9s. Reason: RUNNING
2024-12-08 08:56:05,610 Sleeping for 10s. Reason: RUNNING
2024-12-08 08:56:15,869 Sleeping for 6s. Reason: RUNNING
2024-12-08 08:56:23,593 Sleeping for 10s. Reason: PENDING
2024-12-08 08:56:33,854 Sleeping for 9s. Reason: PENDING
2024-12-08 08:56:43,111 Sleeping for 5s. Reason: PENDING
2024-12-08 08:56:48,370 Sleeping for 5s. Reason: PENDING
2024-12-08 08:56:53,631 Sleeping for 6s. Reason: PENDING
2024-12-08 08:56:59,888 Sleeping for 6s. Reason: PENDING
2024-12-08 08:57:06,140 Sleeping for 8s. Reason: PENDING
2024-12-08 08:57:14,402 Sleeping for 8s. Reason: PENDING
2024-12-08 08:57:22,662 Sleeping for 5s. Reason: PENDING
2024-12-08 08:57:27,918 Sleeping for 10s. Reason: RUNNING
2024-12-08 08:57:38,181 Sleeping for 10s. Reason: RUNNING
2024-12-08 08:57:48,446 Sleeping for 5s. Reason: RUNNING
2024-12-08 08:57:53,701 Sleeping for 5s. Reason: RUNNING
2024-12-08 08:57:58,957 Sleeping for 7s. Reason: RUNNING
2024-12-08 08:58:06,213 Sleeping for 8s. Reason: RUNNING
2024-12-08 08:58:14,470 Sleeping for 10s. Reason: RUNNING
2024-12-08 08:58:24,727 Sleeping for 6s. Reason: RUNNING
2024-12-08 08:58:30,983 Sleeping for 8s. Reason: RUNNING
2024-12-08 08:58:43,474 Setting max_seq=508, max_extra_seq=2048
2024-12-08 09:01:50,056 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=54 pTM=0.234 ipTM=0.174
2024-12-08 09:02:28,526 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=55 pTM=0.224 ipTM=0.218 tol=22.4
2024-12-08 09:03:07,181 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=54.8 pTM=0.222 ipTM=0.208 tol=12.5
2024-12-08 09:03:45,966 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=54.2 pTM=0.218 ipTM=0.199 tol=12.6
2024-12-08 09:04:24,804 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=54.2 pTM=0.233 ipTM=0.18 tol=17.1
2024-12-08 09:05:03,692 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=53.9 pTM=0.229 ipTM=0.185 tol=5.41
2024-12-08 09:05:42,568 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=53.9 pTM=0.228 ipTM=0.182 tol=9.91
2024-12-08 09:06:21,426 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=53.4 pTM=0.218 ipTM=0.189 tol=6.21
2024-12-08 09:07:00,283 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=54 pTM=0.221 ipTM=0.183 tol=4.97
2024-12-08 09:07:39,119 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=53.7 pTM=0.227 ipTM=0.207 tol=5.18
2024-12-08 09:08:17,993 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=54.2 pTM=0.241 ipTM=0.204 tol=7.63
2024-12-08 09:08:56,877 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=53.9 pTM=0.244 ipTM=0.19 tol=5.59
2024-12-08 09:09:35,790 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=53.1 pTM=0.227 ipTM=0.19 tol=6.89
2024-12-08 09:10:14,672 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=53.2 pTM=0.227 ipTM=0.2 tol=7.88
2024-12-08 09:10:53,573 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=52.5 pTM=0.22 ipTM=0.194 tol=8.48
2024-12-08 09:11:32,479 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=53.5 pTM=0.227 ipTM=0.196 tol=6.86
2024-12-08 09:12:11,362 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=52.8 pTM=0.221 ipTM=0.195 tol=5.09
2024-12-08 09:12:50,305 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=52.2 pTM=0.219 ipTM=0.188 tol=6.54
2024-12-08 09:13:29,176 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=52.1 pTM=0.224 ipTM=0.199 tol=8.97
2024-12-08 09:14:08,045 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=53.7 pTM=0.226 ipTM=0.198 tol=8.09
2024-12-08 09:14:46,911 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=52.9 pTM=0.225 ipTM=0.198 tol=7.63
2024-12-08 09:15:25,833 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=53.1 pTM=0.227 ipTM=0.184 tol=9.19
2024-12-08 09:16:04,746 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=52.1 pTM=0.226 ipTM=0.182 tol=9.02
2024-12-08 09:16:43,658 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=53 pTM=0.218 ipTM=0.198 tol=6.92
2024-12-08 09:17:22,516 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=53.5 pTM=0.219 ipTM=0.213 tol=5.1
2024-12-08 09:18:01,358 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=53.5 pTM=0.219 ipTM=0.199 tol=6.32
2024-12-08 09:18:40,181 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=54.1 pTM=0.227 ipTM=0.181 tol=5.43
2024-12-08 09:19:19,002 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=53.2 pTM=0.214 ipTM=0.173 tol=6.32
2024-12-08 09:19:57,829 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=53.2 pTM=0.215 ipTM=0.177 tol=4.38
2024-12-08 09:20:36,671 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=51.9 pTM=0.217 ipTM=0.183 tol=4.93
2024-12-08 09:21:15,523 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=52.5 pTM=0.216 ipTM=0.176 tol=6.09
2024-12-08 09:21:15,524 alphafold2_multimer_v3_model_1_seed_000 took 1346.6s (30 recycles)
2024-12-08 09:21:55,244 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=51.7 pTM=0.243 ipTM=0.135
2024-12-08 09:22:34,067 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=51.4 pTM=0.218 ipTM=0.207 tol=33.2
2024-12-08 09:23:12,829 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=52.8 pTM=0.224 ipTM=0.204 tol=16
2024-12-08 09:23:51,613 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=50.2 pTM=0.217 ipTM=0.193 tol=23.6
2024-12-08 09:24:30,397 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=53.3 pTM=0.245 ipTM=0.166 tol=11.2
2024-12-08 09:25:09,154 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=53.2 pTM=0.245 ipTM=0.201 tol=13.7
2024-12-08 09:25:47,896 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=53.1 pTM=0.245 ipTM=0.196 tol=10.6
2024-12-08 09:26:26,635 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=52.6 pTM=0.246 ipTM=0.227 tol=9.59
2024-12-08 09:27:05,369 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=53.7 pTM=0.257 ipTM=0.226 tol=4.6
2024-12-08 09:27:44,170 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=52.5 pTM=0.252 ipTM=0.197 tol=6
2024-12-08 09:28:22,951 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=53.5 pTM=0.253 ipTM=0.25 tol=6.43
2024-12-08 09:29:01,729 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=53.1 pTM=0.257 ipTM=0.224 tol=5.24
2024-12-08 09:29:40,533 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=53.2 pTM=0.257 ipTM=0.184 tol=5.83
2024-12-08 09:30:19,321 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=54.2 pTM=0.256 ipTM=0.25 tol=5.12
2024-12-08 09:30:58,121 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=53.8 pTM=0.252 ipTM=0.231 tol=2.39
2024-12-08 09:31:36,899 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=53.2 pTM=0.248 ipTM=0.218 tol=5
2024-12-08 09:32:15,669 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=53.7 pTM=0.249 ipTM=0.237 tol=3.54
2024-12-08 09:32:54,451 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=51 pTM=0.243 ipTM=0.21 tol=4.59
2024-12-08 09:33:33,278 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=49.1 pTM=0.214 ipTM=0.196 tol=7.57
2024-12-08 09:34:12,018 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=51.8 pTM=0.244 ipTM=0.246 tol=8.13
2024-12-08 09:34:50,753 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=49.2 pTM=0.214 ipTM=0.221 tol=7.71
2024-12-08 09:35:29,507 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=50.9 pTM=0.242 ipTM=0.211 tol=7.64
2024-12-08 09:36:08,297 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=48.7 pTM=0.214 ipTM=0.243 tol=9.45
2024-12-08 09:36:47,043 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=50.5 pTM=0.233 ipTM=0.225 tol=12
2024-12-08 09:37:25,846 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=49.2 pTM=0.217 ipTM=0.212 tol=9.84
2024-12-08 09:38:04,615 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=52.5 pTM=0.246 ipTM=0.25 tol=10
2024-12-08 09:38:43,430 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=49.7 pTM=0.214 ipTM=0.226 tol=9.78
2024-12-08 09:39:22,237 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=51.2 pTM=0.237 ipTM=0.215 tol=8.68
2024-12-08 09:40:01,068 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=48.6 pTM=0.215 ipTM=0.209 tol=10.8
2024-12-08 09:40:39,855 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=52.2 pTM=0.248 ipTM=0.258 tol=11.7
2024-12-08 09:41:18,646 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=49.8 pTM=0.217 ipTM=0.23 tol=12.9
2024-12-08 09:41:18,647 alphafold2_multimer_v3_model_2_seed_000 took 1202.2s (30 recycles)
2024-12-08 09:41:58,479 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=56.1 pTM=0.262 ipTM=0.196
2024-12-08 09:42:37,341 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=56.3 pTM=0.26 ipTM=0.253 tol=25.1
2024-12-08 09:43:16,281 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=55.5 pTM=0.247 ipTM=0.274 tol=18.4
2024-12-08 09:43:55,225 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=55.6 pTM=0.25 ipTM=0.264 tol=13.8
2024-12-08 09:44:34,146 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=55.9 pTM=0.243 ipTM=0.267 tol=7.39
2024-12-08 09:45:13,004 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=56.4 pTM=0.249 ipTM=0.27 tol=7.05
2024-12-08 09:45:51,868 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=56 pTM=0.24 ipTM=0.263 tol=6.09
2024-12-08 09:46:30,730 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=55.7 pTM=0.244 ipTM=0.257 tol=6.7
2024-12-08 09:47:09,537 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=56.1 pTM=0.246 ipTM=0.264 tol=7.64
2024-12-08 09:47:48,409 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=55.9 pTM=0.247 ipTM=0.268 tol=8.01
2024-12-08 09:48:27,274 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=56.2 pTM=0.244 ipTM=0.278 tol=8.48
2024-12-08 09:49:06,160 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=55.9 pTM=0.249 ipTM=0.268 tol=4.73
2024-12-08 09:49:45,033 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=56.2 pTM=0.248 ipTM=0.275 tol=4.35
2024-12-08 09:50:23,847 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=56.8 pTM=0.255 ipTM=0.27 tol=9.6
2024-12-08 09:51:02,668 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=56.5 pTM=0.248 ipTM=0.288 tol=5.32
2024-12-08 09:51:41,523 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=56.2 pTM=0.253 ipTM=0.279 tol=7.28
2024-12-08 09:52:20,360 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=56.4 pTM=0.247 ipTM=0.291 tol=5.91
2024-12-08 09:52:59,192 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=56.3 pTM=0.245 ipTM=0.281 tol=4.45
2024-12-08 09:53:38,033 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=57.2 pTM=0.26 ipTM=0.29 tol=6.81
2024-12-08 09:54:16,938 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=55.8 pTM=0.233 ipTM=0.282 tol=6.6
2024-12-08 09:54:55,887 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=56 pTM=0.236 ipTM=0.306 tol=13.4
2024-12-08 09:55:34,869 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=55.2 pTM=0.226 ipTM=0.276 tol=13
2024-12-08 09:56:13,825 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=55 pTM=0.241 ipTM=0.273 tol=12.4
2024-12-08 09:56:52,757 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=55.2 pTM=0.241 ipTM=0.276 tol=10.1
2024-12-08 09:57:31,667 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=55.2 pTM=0.258 ipTM=0.237 tol=15.1
2024-12-08 09:58:10,559 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=54.6 pTM=0.244 ipTM=0.284 tol=8.98
2024-12-08 09:58:49,533 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=53 pTM=0.235 ipTM=0.272 tol=12.1
2024-12-08 09:59:28,406 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=56.9 pTM=0.255 ipTM=0.309 tol=10.1
2024-12-08 10:00:07,222 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=55.2 pTM=0.244 ipTM=0.318 tol=10.9
2024-12-08 10:00:46,018 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=56 pTM=0.269 ipTM=0.314 tol=13
2024-12-08 10:01:24,788 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=54.4 pTM=0.242 ipTM=0.318 tol=12.7
2024-12-08 10:01:24,789 alphafold2_multimer_v3_model_3_seed_000 took 1205.2s (30 recycles)
2024-12-08 10:02:04,646 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=50.8 pTM=0.235 ipTM=0.142
2024-12-08 10:02:43,740 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=48.9 pTM=0.249 ipTM=0.146 tol=23.6
2024-12-08 10:03:22,840 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=47.3 pTM=0.219 ipTM=0.136 tol=29.7
2024-12-08 10:04:01,926 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=48.3 pTM=0.222 ipTM=0.166 tol=25.2
2024-12-08 10:04:41,027 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=47.4 pTM=0.211 ipTM=0.142 tol=13.6
2024-12-08 10:05:20,098 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=47.9 pTM=0.205 ipTM=0.147 tol=12.1
2024-12-08 10:05:59,130 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=49.5 pTM=0.234 ipTM=0.155 tol=10.6
2024-12-08 10:06:38,166 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=49.2 pTM=0.21 ipTM=0.142 tol=7.93
2024-12-08 10:07:17,266 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=48.3 pTM=0.215 ipTM=0.135 tol=13.9
2024-12-08 10:07:56,340 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=48.5 pTM=0.209 ipTM=0.131 tol=15.4
2024-12-08 10:08:35,381 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=49.1 pTM=0.237 ipTM=0.161 tol=18.3
2024-12-08 10:09:14,506 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=48.2 pTM=0.208 ipTM=0.14 tol=11.1
2024-12-08 10:09:53,599 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=48.4 pTM=0.21 ipTM=0.13 tol=25.5
2024-12-08 10:10:32,719 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=48.4 pTM=0.203 ipTM=0.135 tol=20.3
2024-12-08 10:11:11,776 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=49 pTM=0.242 ipTM=0.149 tol=8.66
2024-12-08 10:11:50,875 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=49.5 pTM=0.223 ipTM=0.143 tol=19.9
2024-12-08 10:12:30,052 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=47.7 pTM=0.209 ipTM=0.141 tol=16.5
2024-12-08 10:13:09,200 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=48.3 pTM=0.205 ipTM=0.139 tol=15.3
2024-12-08 10:13:48,176 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=49.8 pTM=0.251 ipTM=0.154 tol=12.7
2024-12-08 10:14:27,226 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=50.1 pTM=0.217 ipTM=0.162 tol=23.5
2024-12-08 10:15:06,350 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=47.2 pTM=0.209 ipTM=0.15 tol=22.8
2024-12-08 10:15:45,430 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=47.6 pTM=0.205 ipTM=0.145 tol=15.7
2024-12-08 10:16:24,559 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=46.9 pTM=0.206 ipTM=0.134 tol=19.4
2024-12-08 10:17:03,626 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=48.2 pTM=0.207 ipTM=0.131 tol=11.2
2024-12-08 10:17:42,698 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=47.1 pTM=0.211 ipTM=0.149 tol=9.59
2024-12-08 10:18:21,789 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=47.6 pTM=0.208 ipTM=0.133 tol=11.2
2024-12-08 10:19:00,880 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=47.4 pTM=0.211 ipTM=0.135 tol=16.5
2024-12-08 10:19:39,938 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=48.2 pTM=0.207 ipTM=0.135 tol=11.9
2024-12-08 10:20:19,029 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=47.7 pTM=0.212 ipTM=0.138 tol=14.4
2024-12-08 10:20:58,092 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=47.5 pTM=0.207 ipTM=0.149 tol=28.7
2024-12-08 10:21:37,189 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=49.8 pTM=0.243 ipTM=0.157 tol=8.05
2024-12-08 10:21:37,190 alphafold2_multimer_v3_model_4_seed_000 took 1211.5s (30 recycles)
2024-12-08 10:22:17,028 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=54 pTM=0.27 ipTM=0.135
2024-12-08 10:22:55,949 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=52.3 pTM=0.261 ipTM=0.134 tol=21.2
2024-12-08 10:23:34,898 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=51.8 pTM=0.24 ipTM=0.141 tol=38.6
2024-12-08 10:24:13,837 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=49.8 pTM=0.231 ipTM=0.14 tol=14
2024-12-08 10:24:52,757 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=53.4 pTM=0.271 ipTM=0.146 tol=20.1
2024-12-08 10:25:31,670 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=52.5 pTM=0.247 ipTM=0.145 tol=19.9
2024-12-08 10:26:10,632 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=51 pTM=0.232 ipTM=0.14 tol=11.3
2024-12-08 10:26:49,568 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=51.3 pTM=0.239 ipTM=0.198 tol=20.7
2024-12-08 10:27:28,495 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=52.6 pTM=0.25 ipTM=0.142 tol=10.9
2024-12-08 10:28:07,422 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=52.3 pTM=0.252 ipTM=0.148 tol=30.2
2024-12-08 10:28:46,316 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=53 pTM=0.254 ipTM=0.156 tol=7.28
2024-12-08 10:29:25,257 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=52.7 pTM=0.252 ipTM=0.149 tol=13.8
2024-12-08 10:30:04,186 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=53.6 pTM=0.255 ipTM=0.151 tol=9.86
2024-12-08 10:30:43,074 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=53.5 pTM=0.251 ipTM=0.148 tol=5.91
2024-12-08 10:31:21,969 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=53.3 pTM=0.26 ipTM=0.147 tol=11.6
2024-12-08 10:32:00,819 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=53.1 pTM=0.258 ipTM=0.144 tol=11.8
2024-12-08 10:32:39,712 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=52.2 pTM=0.252 ipTM=0.143 tol=8.52
2024-12-08 10:33:18,577 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=52.2 pTM=0.239 ipTM=0.143 tol=12.3
2024-12-08 10:33:57,452 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=53.8 pTM=0.259 ipTM=0.144 tol=10.2
2024-12-08 10:34:36,289 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=53.2 pTM=0.257 ipTM=0.154 tol=14.5
2024-12-08 10:35:15,149 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=52.8 pTM=0.248 ipTM=0.144 tol=9.78
2024-12-08 10:35:54,064 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=51.6 pTM=0.229 ipTM=0.14 tol=19.7
2024-12-08 10:36:32,962 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=52 pTM=0.241 ipTM=0.141 tol=13.9
2024-12-08 10:37:11,943 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=51.1 pTM=0.241 ipTM=0.141 tol=23.8
2024-12-08 10:37:50,877 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=49.9 pTM=0.235 ipTM=0.163 tol=15.3
2024-12-08 10:38:29,799 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=50.7 pTM=0.234 ipTM=0.144 tol=11.6
2024-12-08 10:39:08,713 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=50.8 pTM=0.238 ipTM=0.142 tol=11.4
2024-12-08 10:39:47,637 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=50.8 pTM=0.239 ipTM=0.145 tol=8.72
2024-12-08 10:40:26,582 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=50.5 pTM=0.238 ipTM=0.142 tol=8.97
2024-12-08 10:41:05,517 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=50.9 pTM=0.237 ipTM=0.141 tol=10.8
2024-12-08 10:41:44,462 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=50.8 pTM=0.234 ipTM=0.144 tol=13.9
2024-12-08 10:41:44,463 alphafold2_multimer_v3_model_5_seed_000 took 1206.3s (30 recycles)
2024-12-08 10:41:45,405 reranking models by 'multimer' metric
2024-12-08 10:41:48,117 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-08 10:44:48,058 Relaxation took 182.7s
2024-12-08 10:44:48,058 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=54.4 pTM=0.242 ipTM=0.318
2024-12-08 10:46:53,057 Relaxation took 125.0s
2024-12-08 10:46:53,057 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=49.8 pTM=0.217 ipTM=0.23
2024-12-08 10:48:26,510 Relaxation took 93.5s
2024-12-08 10:48:26,510 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=52.5 pTM=0.216 ipTM=0.176
2024-12-08 10:49:55,804 Relaxation took 89.3s
2024-12-08 10:49:55,804 rank_004_alphafold2_multimer_v3_model_4_seed_000 pLDDT=49.8 pTM=0.243 ipTM=0.157
2024-12-08 10:51:51,750 Relaxation took 115.9s
2024-12-08 10:51:51,750 rank_005_alphafold2_multimer_v3_model_5_seed_000 pLDDT=50.8 pTM=0.234 ipTM=0.144
2024-12-08 10:51:54,181 Done