2024-12-08 09:08:41,267 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-08 09:08:41,556 Running on GPU
2024-12-08 09:08:44,385 Found 6 citations for tools or databases
2024-12-08 09:08:44,385 Query 1/1: RNF40_TCP10L (length 1216)
2024-12-08 09:08:44,835 Sleeping for 8s. Reason: PENDING
2024-12-08 09:08:53,090 Sleeping for 8s. Reason: RUNNING
2024-12-08 09:09:01,351 Sleeping for 6s. Reason: RUNNING
2024-12-08 09:09:07,611 Sleeping for 5s. Reason: RUNNING
2024-12-08 09:09:12,865 Sleeping for 10s. Reason: RUNNING
2024-12-08 09:09:23,124 Sleeping for 8s. Reason: RUNNING
2024-12-08 09:09:31,387 Sleeping for 6s. Reason: RUNNING
2024-12-08 09:09:37,657 Sleeping for 8s. Reason: RUNNING
2024-12-08 09:09:45,927 Sleeping for 10s. Reason: RUNNING
2024-12-08 09:09:56,191 Sleeping for 8s. Reason: RUNNING
2024-12-08 09:10:04,452 Sleeping for 5s. Reason: RUNNING
2024-12-08 09:10:09,706 Sleeping for 9s. Reason: RUNNING
2024-12-08 09:10:18,960 Sleeping for 5s. Reason: RUNNING
2024-12-08 09:10:24,215 Sleeping for 8s. Reason: RUNNING
2024-12-08 09:10:32,478 Sleeping for 5s. Reason: RUNNING
2024-12-08 09:10:39,250 Sleeping for 7s. Reason: PENDING
2024-12-08 09:10:46,505 Sleeping for 6s. Reason: RUNNING
2024-12-08 09:10:52,757 Sleeping for 9s. Reason: RUNNING
2024-12-08 09:11:02,021 Sleeping for 10s. Reason: RUNNING
2024-12-08 09:11:12,284 Sleeping for 5s. Reason: RUNNING
2024-12-08 09:11:17,541 Sleeping for 8s. Reason: RUNNING
2024-12-08 09:11:25,812 Sleeping for 10s. Reason: RUNNING
2024-12-08 09:11:36,078 Sleeping for 6s. Reason: RUNNING
2024-12-08 09:11:44,984 Setting max_seq=508, max_extra_seq=2048
2024-12-08 09:14:10,416 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=53.7 pTM=0.254 ipTM=0.129
2024-12-08 09:14:43,595 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=51.2 pTM=0.226 ipTM=0.152 tol=18.1
2024-12-08 09:15:16,810 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=52.5 pTM=0.223 ipTM=0.148 tol=9.18
2024-12-08 09:15:50,098 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=52.3 pTM=0.231 ipTM=0.132 tol=11.3
2024-12-08 09:16:23,423 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=52.8 pTM=0.227 ipTM=0.128 tol=14
2024-12-08 09:16:56,776 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=51 pTM=0.217 ipTM=0.178 tol=18.5
2024-12-08 09:17:30,139 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=52.7 pTM=0.216 ipTM=0.207 tol=10.8
2024-12-08 09:18:03,565 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=53 pTM=0.213 ipTM=0.24 tol=7.17
2024-12-08 09:18:37,046 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=53.2 pTM=0.208 ipTM=0.236 tol=6.3
2024-12-08 09:19:10,510 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=52.7 pTM=0.206 ipTM=0.21 tol=6.08
2024-12-08 09:19:44,025 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=52.2 pTM=0.208 ipTM=0.194 tol=6.7
2024-12-08 09:20:17,518 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=53.2 pTM=0.205 ipTM=0.243 tol=5.77
2024-12-08 09:20:51,019 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=52.4 pTM=0.209 ipTM=0.239 tol=6.78
2024-12-08 09:21:24,544 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=52.3 pTM=0.206 ipTM=0.213 tol=5.97
2024-12-08 09:21:58,074 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=53.1 pTM=0.209 ipTM=0.217 tol=4.95
2024-12-08 09:22:31,576 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=52.8 pTM=0.212 ipTM=0.267 tol=5.72
2024-12-08 09:23:05,100 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=52.4 pTM=0.209 ipTM=0.262 tol=4.51
2024-12-08 09:23:38,605 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=53 pTM=0.209 ipTM=0.25 tol=4.32
2024-12-08 09:24:12,100 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=52.6 pTM=0.211 ipTM=0.23 tol=3.6
2024-12-08 09:24:45,619 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=52.1 pTM=0.212 ipTM=0.222 tol=5.9
2024-12-08 09:25:19,141 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=52.5 pTM=0.206 ipTM=0.206 tol=4.98
2024-12-08 09:25:52,682 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=52.5 pTM=0.21 ipTM=0.198 tol=4.23
2024-12-08 09:26:26,214 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=51.8 pTM=0.208 ipTM=0.215 tol=4.21
2024-12-08 09:26:59,783 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=51.7 pTM=0.208 ipTM=0.182 tol=6.93
2024-12-08 09:27:33,382 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=52.2 pTM=0.212 ipTM=0.133 tol=13.6
2024-12-08 09:28:06,927 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=52.4 pTM=0.214 ipTM=0.297 tol=24.7
2024-12-08 09:28:40,393 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=52.8 pTM=0.219 ipTM=0.304 tol=9.73
2024-12-08 09:29:13,858 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=53.2 pTM=0.227 ipTM=0.325 tol=8.88
2024-12-08 09:29:47,325 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=54 pTM=0.227 ipTM=0.33 tol=7.59
2024-12-08 09:30:20,763 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=53.6 pTM=0.227 ipTM=0.329 tol=8.34
2024-12-08 09:30:54,183 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=54.2 pTM=0.235 ipTM=0.35 tol=5.61
2024-12-08 09:30:54,185 alphafold2_multimer_v3_model_1_seed_000 took 1144.3s (30 recycles)
2024-12-08 09:31:28,494 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=53.2 pTM=0.256 ipTM=0.133
2024-12-08 09:32:01,859 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=50.6 pTM=0.241 ipTM=0.182 tol=30.2
2024-12-08 09:32:35,197 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=52.5 pTM=0.248 ipTM=0.199 tol=53.6
2024-12-08 09:33:08,590 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=51.8 pTM=0.26 ipTM=0.172 tol=14.6
2024-12-08 09:33:42,005 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=50.2 pTM=0.223 ipTM=0.209 tol=46.7
2024-12-08 09:34:15,442 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=51.1 pTM=0.232 ipTM=0.191 tol=11
2024-12-08 09:34:48,827 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=48.8 pTM=0.223 ipTM=0.229 tol=10.6
2024-12-08 09:35:22,336 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=48.8 pTM=0.21 ipTM=0.14 tol=10.9
2024-12-08 09:35:55,741 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=51.6 pTM=0.239 ipTM=0.182 tol=11.8
2024-12-08 09:36:29,255 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=49.4 pTM=0.224 ipTM=0.133 tol=19.6
2024-12-08 09:37:02,645 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=53.2 pTM=0.254 ipTM=0.256 tol=23.6
2024-12-08 09:37:35,994 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=53.3 pTM=0.25 ipTM=0.279 tol=8.4
2024-12-08 09:38:09,400 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=51.2 pTM=0.246 ipTM=0.197 tol=6.82
2024-12-08 09:38:42,762 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=51.7 pTM=0.244 ipTM=0.28 tol=7.63
2024-12-08 09:39:16,126 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=50.9 pTM=0.25 ipTM=0.225 tol=7.11
2024-12-08 09:39:49,556 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=51 pTM=0.244 ipTM=0.149 tol=16.5
2024-12-08 09:40:22,955 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=50.4 pTM=0.241 ipTM=0.193 tol=44.7
2024-12-08 09:40:56,383 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=52.1 pTM=0.243 ipTM=0.134 tol=29.3
2024-12-08 09:41:29,790 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=52.8 pTM=0.256 ipTM=0.219 tol=28.1
2024-12-08 09:42:03,144 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=52.1 pTM=0.252 ipTM=0.218 tol=7.15
2024-12-08 09:42:36,492 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=52.1 pTM=0.25 ipTM=0.202 tol=4.13
2024-12-08 09:43:09,858 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=53 pTM=0.253 ipTM=0.261 tol=21.2
2024-12-08 09:43:43,193 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=53.3 pTM=0.254 ipTM=0.306 tol=7.22
2024-12-08 09:44:16,520 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=54.5 pTM=0.255 ipTM=0.338 tol=5.68
2024-12-08 09:44:49,897 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=53.2 pTM=0.25 ipTM=0.333 tol=5.98
2024-12-08 09:45:23,265 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=52.9 pTM=0.254 ipTM=0.351 tol=7.87
2024-12-08 09:45:56,677 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=51.5 pTM=0.251 ipTM=0.323 tol=4.86
2024-12-08 09:46:30,099 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=50.4 pTM=0.251 ipTM=0.324 tol=9.05
2024-12-08 09:47:03,510 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=50.8 pTM=0.243 ipTM=0.305 tol=6.8
2024-12-08 09:47:36,902 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=52.3 pTM=0.252 ipTM=0.34 tol=9.39
2024-12-08 09:48:10,287 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=52.2 pTM=0.248 ipTM=0.327 tol=9.31
2024-12-08 09:48:10,288 alphafold2_multimer_v3_model_2_seed_000 took 1035.2s (30 recycles)
2024-12-08 09:48:44,639 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=53.8 pTM=0.27 ipTM=0.155
2024-12-08 09:49:18,189 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=54.1 pTM=0.27 ipTM=0.151 tol=35.4
2024-12-08 09:49:51,694 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=56.2 pTM=0.302 ipTM=0.316 tol=36.3
2024-12-08 09:50:25,170 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=57.2 pTM=0.307 ipTM=0.349 tol=12
2024-12-08 09:50:58,656 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=57.7 pTM=0.309 ipTM=0.355 tol=6.36
2024-12-08 09:51:32,120 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=57.4 pTM=0.313 ipTM=0.354 tol=5.68
2024-12-08 09:52:05,614 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=57.4 pTM=0.311 ipTM=0.359 tol=10.3
2024-12-08 09:52:39,101 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=57.6 pTM=0.315 ipTM=0.363 tol=10.7
2024-12-08 09:53:12,579 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=58.1 pTM=0.313 ipTM=0.363 tol=6.27
2024-12-08 09:53:46,049 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=58.1 pTM=0.315 ipTM=0.362 tol=6.45
2024-12-08 09:54:19,531 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=57.9 pTM=0.317 ipTM=0.365 tol=5.86
2024-12-08 09:54:52,960 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=57.8 pTM=0.317 ipTM=0.363 tol=3.81
2024-12-08 09:55:26,411 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=58.1 pTM=0.319 ipTM=0.363 tol=7.11
2024-12-08 09:55:59,879 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=57.9 pTM=0.316 ipTM=0.359 tol=8.23
2024-12-08 09:56:33,351 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=57.6 pTM=0.316 ipTM=0.364 tol=8.64
2024-12-08 09:57:06,831 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=57.8 pTM=0.319 ipTM=0.366 tol=8.4
2024-12-08 09:57:40,280 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=57.5 pTM=0.317 ipTM=0.367 tol=7.86
2024-12-08 09:58:13,715 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=57.9 pTM=0.32 ipTM=0.367 tol=2.78
2024-12-08 09:58:47,155 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=57.5 pTM=0.316 ipTM=0.365 tol=4.45
2024-12-08 09:59:20,592 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=57.3 pTM=0.317 ipTM=0.362 tol=5.76
2024-12-08 09:59:54,004 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=57.3 pTM=0.317 ipTM=0.365 tol=3.26
2024-12-08 10:00:27,415 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=57.9 pTM=0.317 ipTM=0.364 tol=3.19
2024-12-08 10:01:00,827 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=57.8 pTM=0.318 ipTM=0.366 tol=2.63
2024-12-08 10:01:34,248 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=57.5 pTM=0.316 ipTM=0.365 tol=5.36
2024-12-08 10:02:07,660 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=57.8 pTM=0.317 ipTM=0.367 tol=3.78
2024-12-08 10:02:41,102 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=58 pTM=0.321 ipTM=0.369 tol=3.74
2024-12-08 10:03:14,542 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=57.7 pTM=0.316 ipTM=0.368 tol=3.14
2024-12-08 10:03:47,998 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=57.8 pTM=0.318 ipTM=0.369 tol=3.02
2024-12-08 10:04:21,450 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=57.8 pTM=0.315 ipTM=0.365 tol=2.79
2024-12-08 10:04:54,919 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=57.7 pTM=0.317 ipTM=0.365 tol=5.55
2024-12-08 10:05:28,355 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=57.8 pTM=0.317 ipTM=0.369 tol=2.79
2024-12-08 10:05:28,356 alphafold2_multimer_v3_model_3_seed_000 took 1037.2s (30 recycles)
2024-12-08 10:06:02,790 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=51.8 pTM=0.242 ipTM=0.339
2024-12-08 10:06:36,293 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=51.2 pTM=0.256 ipTM=0.334 tol=22.2
2024-12-08 10:07:09,818 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=48.5 pTM=0.234 ipTM=0.286 tol=11.1
2024-12-08 10:07:43,307 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=49 pTM=0.246 ipTM=0.195 tol=16.2
2024-12-08 10:08:16,964 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=45.9 pTM=0.202 ipTM=0.131 tol=12.9
2024-12-08 10:08:50,577 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=47.1 pTM=0.215 ipTM=0.127 tol=25.7
2024-12-08 10:09:24,177 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=45.1 pTM=0.204 ipTM=0.183 tol=24.3
2024-12-08 10:09:57,752 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=46.2 pTM=0.224 ipTM=0.155 tol=10.8
2024-12-08 10:10:31,434 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=45.2 pTM=0.199 ipTM=0.145 tol=11.7
2024-12-08 10:11:05,096 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=45.5 pTM=0.202 ipTM=0.125 tol=27.7
2024-12-08 10:11:38,762 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=45 pTM=0.195 ipTM=0.131 tol=17.5
2024-12-08 10:12:12,332 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=46.8 pTM=0.228 ipTM=0.242 tol=38.7
2024-12-08 10:12:45,931 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=46.2 pTM=0.209 ipTM=0.154 tol=11.7
2024-12-08 10:13:19,549 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=45.9 pTM=0.21 ipTM=0.141 tol=10.4
2024-12-08 10:13:53,215 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=45.5 pTM=0.199 ipTM=0.131 tol=41.8
2024-12-08 10:14:26,814 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=45.9 pTM=0.206 ipTM=0.17 tol=12.1
2024-12-08 10:15:00,484 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=45.8 pTM=0.205 ipTM=0.138 tol=12.9
2024-12-08 10:15:34,132 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=46.3 pTM=0.204 ipTM=0.126 tol=19.2
2024-12-08 10:16:07,829 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=46 pTM=0.194 ipTM=0.126 tol=26.5
2024-12-08 10:16:41,498 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=45.9 pTM=0.207 ipTM=0.133 tol=28.7
2024-12-08 10:17:15,171 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=45.7 pTM=0.2 ipTM=0.128 tol=10.1
2024-12-08 10:17:48,801 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=46.4 pTM=0.2 ipTM=0.141 tol=12.6
2024-12-08 10:18:22,447 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=46.1 pTM=0.203 ipTM=0.129 tol=14
2024-12-08 10:18:56,139 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=46.4 pTM=0.211 ipTM=0.126 tol=20.1
2024-12-08 10:19:29,813 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=45.4 pTM=0.198 ipTM=0.129 tol=26.1
2024-12-08 10:20:03,437 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=45.6 pTM=0.204 ipTM=0.137 tol=22.1
2024-12-08 10:20:37,095 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=45.5 pTM=0.195 ipTM=0.134 tol=11.9
2024-12-08 10:21:10,740 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=46 pTM=0.203 ipTM=0.133 tol=7.81
2024-12-08 10:21:44,460 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=45.5 pTM=0.196 ipTM=0.126 tol=26.1
2024-12-08 10:22:18,137 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=46.1 pTM=0.212 ipTM=0.129 tol=20.5
2024-12-08 10:22:51,863 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=44.9 pTM=0.192 ipTM=0.125 tol=21.4
2024-12-08 10:22:51,864 alphafold2_multimer_v3_model_4_seed_000 took 1042.6s (30 recycles)
2024-12-08 10:23:26,161 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=54.8 pTM=0.277 ipTM=0.17
2024-12-08 10:23:59,597 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=54.7 pTM=0.278 ipTM=0.147 tol=18.8
2024-12-08 10:24:33,036 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=55.8 pTM=0.272 ipTM=0.308 tol=16.5
2024-12-08 10:25:06,425 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=55.8 pTM=0.271 ipTM=0.311 tol=8.8
2024-12-08 10:25:39,849 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=55.7 pTM=0.269 ipTM=0.312 tol=14.6
2024-12-08 10:26:13,247 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=55.2 pTM=0.27 ipTM=0.306 tol=6.01
2024-12-08 10:26:46,679 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=53.4 pTM=0.258 ipTM=0.286 tol=9.76
2024-12-08 10:27:20,107 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=53.8 pTM=0.255 ipTM=0.281 tol=6.55
2024-12-08 10:27:53,534 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=53.5 pTM=0.248 ipTM=0.275 tol=7.62
2024-12-08 10:28:26,938 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=53.8 pTM=0.249 ipTM=0.283 tol=6.13
2024-12-08 10:29:00,370 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=52.9 pTM=0.253 ipTM=0.259 tol=6.3
2024-12-08 10:29:33,793 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=54.1 pTM=0.259 ipTM=0.257 tol=5.45
2024-12-08 10:30:07,260 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=52.4 pTM=0.244 ipTM=0.24 tol=6.07
2024-12-08 10:30:40,745 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=52.7 pTM=0.24 ipTM=0.214 tol=11.3
2024-12-08 10:31:14,269 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=52.7 pTM=0.244 ipTM=0.15 tol=12.9
2024-12-08 10:31:47,749 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=54.1 pTM=0.277 ipTM=0.191 tol=6.66
2024-12-08 10:32:21,215 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=53 pTM=0.255 ipTM=0.17 tol=5.52
2024-12-08 10:32:54,698 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=53.6 pTM=0.267 ipTM=0.205 tol=8.89
2024-12-08 10:33:28,159 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=53.2 pTM=0.266 ipTM=0.201 tol=3.79
2024-12-08 10:34:01,695 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=52.6 pTM=0.259 ipTM=0.143 tol=5.25
2024-12-08 10:34:35,213 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=53.2 pTM=0.258 ipTM=0.242 tol=6.99
2024-12-08 10:35:08,748 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=53.6 pTM=0.269 ipTM=0.194 tol=7.21
2024-12-08 10:35:42,315 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=52.8 pTM=0.255 ipTM=0.136 tol=6.71
2024-12-08 10:36:15,793 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=53.7 pTM=0.261 ipTM=0.233 tol=7
2024-12-08 10:36:49,272 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=53.4 pTM=0.258 ipTM=0.232 tol=6.98
2024-12-08 10:37:22,752 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=53.7 pTM=0.263 ipTM=0.251 tol=6.36
2024-12-08 10:37:56,174 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=54.3 pTM=0.264 ipTM=0.293 tol=5.85
2024-12-08 10:38:29,629 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=52.1 pTM=0.247 ipTM=0.269 tol=3.94
2024-12-08 10:39:03,080 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=53.1 pTM=0.261 ipTM=0.258 tol=5.64
2024-12-08 10:39:36,555 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=53.7 pTM=0.271 ipTM=0.278 tol=5.27
2024-12-08 10:40:10,013 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=53.5 pTM=0.261 ipTM=0.268 tol=5.2
2024-12-08 10:40:10,014 alphafold2_multimer_v3_model_5_seed_000 took 1037.3s (30 recycles)
2024-12-08 10:40:10,914 reranking models by 'multimer' metric
2024-12-08 10:40:12,537 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-08 10:41:50,367 Relaxation took 99.5s
2024-12-08 10:41:50,367 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=57.8 pTM=0.317 ipTM=0.369
2024-12-08 10:44:14,435 Relaxation took 144.1s
2024-12-08 10:44:14,435 rank_002_alphafold2_multimer_v3_model_1_seed_000 pLDDT=54.2 pTM=0.235 ipTM=0.35
2024-12-08 10:45:52,331 Relaxation took 97.9s
2024-12-08 10:45:52,331 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=52.2 pTM=0.248 ipTM=0.327
2024-12-08 10:48:23,922 Relaxation took 151.6s
2024-12-08 10:48:23,922 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=53.5 pTM=0.261 ipTM=0.268
2024-12-08 10:50:15,605 Relaxation took 111.7s
2024-12-08 10:50:15,605 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=44.9 pTM=0.192 ipTM=0.125
2024-12-08 10:50:17,908 Done