2024-12-08 09:11:39,220 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-08 09:11:39,512 Running on GPU
2024-12-08 09:11:41,759 Found 6 citations for tools or databases
2024-12-08 09:11:41,759 Query 1/1: RNF40_TFPT (length 1254)
2024-12-08 09:11:42,027 Sleeping for 6s. Reason: PENDING
2024-12-08 09:11:48,282 Sleeping for 10s. Reason: RUNNING
2024-12-08 09:11:58,540 Sleeping for 7s. Reason: RUNNING
2024-12-08 09:12:05,798 Sleeping for 9s. Reason: RUNNING
2024-12-08 09:12:15,059 Sleeping for 5s. Reason: RUNNING
2024-12-08 09:12:20,313 Sleeping for 6s. Reason: RUNNING
2024-12-08 09:12:26,569 Sleeping for 10s. Reason: RUNNING
2024-12-08 09:12:36,834 Sleeping for 5s. Reason: RUNNING
2024-12-08 09:12:42,084 Sleeping for 7s. Reason: RUNNING
2024-12-08 09:12:49,343 Sleeping for 9s. Reason: RUNNING
2024-12-08 09:12:58,605 Sleeping for 5s. Reason: RUNNING
2024-12-08 09:13:03,866 Sleeping for 7s. Reason: RUNNING
2024-12-08 09:13:11,121 Sleeping for 5s. Reason: RUNNING
2024-12-08 09:13:16,373 Sleeping for 7s. Reason: RUNNING
2024-12-08 09:13:23,630 Sleeping for 8s. Reason: RUNNING
2024-12-08 09:13:33,566 Sleeping for 9s. Reason: PENDING
2024-12-08 09:13:42,830 Sleeping for 10s. Reason: RUNNING
2024-12-08 09:13:53,099 Sleeping for 5s. Reason: RUNNING
2024-12-08 09:13:58,356 Sleeping for 10s. Reason: RUNNING
2024-12-08 09:14:08,614 Sleeping for 8s. Reason: RUNNING
2024-12-08 09:14:16,878 Sleeping for 9s. Reason: RUNNING
2024-12-08 09:14:26,133 Sleeping for 6s. Reason: RUNNING
2024-12-08 09:14:32,389 Sleeping for 8s. Reason: RUNNING
2024-12-08 09:14:40,653 Sleeping for 5s. Reason: RUNNING
2024-12-08 09:14:45,911 Sleeping for 5s. Reason: RUNNING
2024-12-08 09:14:54,119 Setting max_seq=508, max_extra_seq=2048
2024-12-08 09:18:00,597 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=50.4 pTM=0.239 ipTM=0.144
2024-12-08 09:18:40,436 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=53.2 pTM=0.242 ipTM=0.149 tol=23.9
2024-12-08 09:19:20,517 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=52 pTM=0.229 ipTM=0.138 tol=12.3
2024-12-08 09:20:00,845 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=51.5 pTM=0.222 ipTM=0.136 tol=12.8
2024-12-08 09:20:41,313 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=51.3 pTM=0.23 ipTM=0.139 tol=11.5
2024-12-08 09:21:21,768 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=49.5 pTM=0.217 ipTM=0.171 tol=24.6
2024-12-08 09:22:02,190 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=49.7 pTM=0.229 ipTM=0.198 tol=17.8
2024-12-08 09:22:42,653 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=50.7 pTM=0.218 ipTM=0.156 tol=9.52
2024-12-08 09:23:23,093 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=51 pTM=0.236 ipTM=0.18 tol=9.69
2024-12-08 09:24:03,480 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=52.2 pTM=0.242 ipTM=0.161 tol=10.5
2024-12-08 09:24:43,897 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=51.8 pTM=0.219 ipTM=0.157 tol=9.2
2024-12-08 09:25:24,370 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=49.6 pTM=0.216 ipTM=0.15 tol=8.64
2024-12-08 09:26:04,775 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=51.7 pTM=0.22 ipTM=0.155 tol=8.05
2024-12-08 09:26:45,205 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=50.6 pTM=0.216 ipTM=0.14 tol=9.28
2024-12-08 09:27:25,724 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=50.7 pTM=0.216 ipTM=0.139 tol=11.9
2024-12-08 09:28:06,194 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=52.2 pTM=0.221 ipTM=0.138 tol=13.2
2024-12-08 09:28:46,684 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=50.5 pTM=0.223 ipTM=0.137 tol=13.8
2024-12-08 09:29:27,159 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=50.2 pTM=0.218 ipTM=0.139 tol=15.7
2024-12-08 09:30:07,600 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=51.8 pTM=0.217 ipTM=0.142 tol=10.6
2024-12-08 09:30:48,010 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=51 pTM=0.217 ipTM=0.139 tol=8.91
2024-12-08 09:31:28,436 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=52.5 pTM=0.213 ipTM=0.141 tol=11.6
2024-12-08 09:32:08,908 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=51.8 pTM=0.218 ipTM=0.139 tol=10.5
2024-12-08 09:32:49,397 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=51.2 pTM=0.213 ipTM=0.138 tol=7.41
2024-12-08 09:33:29,877 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=51.8 pTM=0.217 ipTM=0.136 tol=6.82
2024-12-08 09:34:10,346 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=51.5 pTM=0.213 ipTM=0.135 tol=7.31
2024-12-08 09:34:50,771 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=52.2 pTM=0.22 ipTM=0.139 tol=5.87
2024-12-08 09:35:31,234 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=52.6 pTM=0.212 ipTM=0.136 tol=5.43
2024-12-08 09:36:11,705 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=52.5 pTM=0.216 ipTM=0.138 tol=6.59
2024-12-08 09:36:52,171 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=51.9 pTM=0.212 ipTM=0.137 tol=7.55
2024-12-08 09:37:32,663 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=50.6 pTM=0.215 ipTM=0.137 tol=7.18
2024-12-08 09:38:13,087 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=52.3 pTM=0.219 ipTM=0.137 tol=11.4
2024-12-08 09:38:13,088 alphafold2_multimer_v3_model_1_seed_000 took 1395.5s (30 recycles)
2024-12-08 09:38:54,169 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=51.8 pTM=0.26 ipTM=0.218
2024-12-08 09:39:34,373 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=51.7 pTM=0.277 ipTM=0.345 tol=63.4
2024-12-08 09:40:14,550 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=51.5 pTM=0.271 ipTM=0.347 tol=12.5
2024-12-08 09:40:54,692 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=51 pTM=0.26 ipTM=0.296 tol=7.81
2024-12-08 09:41:34,893 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=50.2 pTM=0.255 ipTM=0.299 tol=6.95
2024-12-08 09:42:15,101 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=50.3 pTM=0.255 ipTM=0.291 tol=6.83
2024-12-08 09:42:55,316 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=50.3 pTM=0.261 ipTM=0.304 tol=5.13
2024-12-08 09:43:35,497 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=51.3 pTM=0.253 ipTM=0.288 tol=3.07
2024-12-08 09:44:15,733 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=50.9 pTM=0.256 ipTM=0.285 tol=4.44
2024-12-08 09:44:55,996 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=50.7 pTM=0.255 ipTM=0.285 tol=5.57
2024-12-08 09:45:36,268 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=51.5 pTM=0.264 ipTM=0.306 tol=7.07
2024-12-08 09:46:16,572 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=51.1 pTM=0.257 ipTM=0.288 tol=5.55
2024-12-08 09:46:56,898 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=51.5 pTM=0.26 ipTM=0.294 tol=4.82
2024-12-08 09:47:37,163 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=50.4 pTM=0.255 ipTM=0.291 tol=4.05
2024-12-08 09:48:17,422 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=50.1 pTM=0.262 ipTM=0.305 tol=5.51
2024-12-08 09:48:57,666 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=50.8 pTM=0.254 ipTM=0.295 tol=5.79
2024-12-08 09:49:37,876 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=50.8 pTM=0.258 ipTM=0.297 tol=4.34
2024-12-08 09:50:18,124 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=50.1 pTM=0.245 ipTM=0.269 tol=4.84
2024-12-08 09:50:58,376 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=50.4 pTM=0.228 ipTM=0.202 tol=8.57
2024-12-08 09:51:38,664 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=50.6 pTM=0.243 ipTM=0.184 tol=5.74
2024-12-08 09:52:19,010 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=51.3 pTM=0.246 ipTM=0.199 tol=7.89
2024-12-08 09:52:59,349 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=51.2 pTM=0.252 ipTM=0.211 tol=10.5
2024-12-08 09:53:39,636 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=52.8 pTM=0.263 ipTM=0.346 tol=8.8
2024-12-08 09:54:19,871 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=53 pTM=0.261 ipTM=0.338 tol=8.94
2024-12-08 09:55:00,147 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=52.7 pTM=0.26 ipTM=0.332 tol=4.64
2024-12-08 09:55:40,462 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=51.6 pTM=0.257 ipTM=0.322 tol=5.7
2024-12-08 09:56:20,778 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=52.1 pTM=0.253 ipTM=0.316 tol=4.62
2024-12-08 09:57:01,072 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=52.2 pTM=0.253 ipTM=0.32 tol=6.55
2024-12-08 09:57:41,320 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=52.7 pTM=0.254 ipTM=0.321 tol=3.2
2024-12-08 09:58:21,589 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=52 pTM=0.251 ipTM=0.319 tol=3.14
2024-12-08 09:59:01,874 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=50.8 pTM=0.256 ipTM=0.324 tol=5.43
2024-12-08 09:59:01,875 alphafold2_multimer_v3_model_2_seed_000 took 1247.8s (30 recycles)
2024-12-08 09:59:43,260 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=55.6 pTM=0.273 ipTM=0.141
2024-12-08 10:00:23,591 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=58.5 pTM=0.303 ipTM=0.377 tol=29.9
2024-12-08 10:01:03,886 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=55.2 pTM=0.281 ipTM=0.311 tol=21.2
2024-12-08 10:01:44,226 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=55.3 pTM=0.285 ipTM=0.326 tol=24
2024-12-08 10:02:24,549 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=55.2 pTM=0.284 ipTM=0.323 tol=11.6
2024-12-08 10:03:04,895 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=54.8 pTM=0.286 ipTM=0.321 tol=9.56
2024-12-08 10:03:45,197 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=55.5 pTM=0.292 ipTM=0.322 tol=6.53
2024-12-08 10:04:25,524 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=56.1 pTM=0.294 ipTM=0.328 tol=4.85
2024-12-08 10:05:05,814 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=56.2 pTM=0.296 ipTM=0.323 tol=4.95
2024-12-08 10:05:46,099 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=56.1 pTM=0.302 ipTM=0.335 tol=2.71
2024-12-08 10:06:26,338 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=56 pTM=0.295 ipTM=0.326 tol=2.04
2024-12-08 10:07:06,592 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=55.7 pTM=0.297 ipTM=0.332 tol=2.28
2024-12-08 10:07:46,797 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=55.9 pTM=0.295 ipTM=0.331 tol=2.83
2024-12-08 10:08:27,049 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=55.9 pTM=0.294 ipTM=0.328 tol=2.76
2024-12-08 10:09:07,260 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=55.9 pTM=0.296 ipTM=0.331 tol=1.94
2024-12-08 10:09:47,464 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=56 pTM=0.296 ipTM=0.327 tol=2.03
2024-12-08 10:10:27,645 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=56.1 pTM=0.299 ipTM=0.329 tol=1.8
2024-12-08 10:11:07,840 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=55.8 pTM=0.295 ipTM=0.329 tol=2.36
2024-12-08 10:11:48,075 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=56.2 pTM=0.295 ipTM=0.328 tol=2.39
2024-12-08 10:12:28,330 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=55.8 pTM=0.295 ipTM=0.324 tol=2.24
2024-12-08 10:13:08,580 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=56.3 pTM=0.295 ipTM=0.334 tol=3.11
2024-12-08 10:13:48,809 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=56.3 pTM=0.298 ipTM=0.325 tol=2.59
2024-12-08 10:14:29,010 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=55.8 pTM=0.293 ipTM=0.327 tol=1.55
2024-12-08 10:15:09,225 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=56.2 pTM=0.294 ipTM=0.325 tol=2.08
2024-12-08 10:15:49,452 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=56.1 pTM=0.296 ipTM=0.324 tol=5.45
2024-12-08 10:16:29,724 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=56 pTM=0.294 ipTM=0.325 tol=5.7
2024-12-08 10:17:09,958 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=55.9 pTM=0.296 ipTM=0.322 tol=3.47
2024-12-08 10:17:50,196 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=55.9 pTM=0.3 ipTM=0.33 tol=2.78
2024-12-08 10:18:30,463 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=55.8 pTM=0.295 ipTM=0.327 tol=3.21
2024-12-08 10:19:10,706 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=55.9 pTM=0.302 ipTM=0.33 tol=3.81
2024-12-08 10:19:50,980 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=55.7 pTM=0.295 ipTM=0.321 tol=6.59
2024-12-08 10:19:50,981 alphafold2_multimer_v3_model_3_seed_000 took 1248.1s (30 recycles)
2024-12-08 10:20:32,606 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=48.5 pTM=0.234 ipTM=0.128
2024-12-08 10:21:13,279 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=47.7 pTM=0.238 ipTM=0.13 tol=21.5
2024-12-08 10:21:54,031 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=45.7 pTM=0.216 ipTM=0.137 tol=19.1
2024-12-08 10:22:34,755 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=46.3 pTM=0.211 ipTM=0.128 tol=23.2
2024-12-08 10:23:15,438 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=46.4 pTM=0.218 ipTM=0.135 tol=24.6
2024-12-08 10:23:56,118 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=45.4 pTM=0.217 ipTM=0.135 tol=17.3
2024-12-08 10:24:36,807 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=46.8 pTM=0.214 ipTM=0.133 tol=10.7
2024-12-08 10:25:17,480 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=46.9 pTM=0.213 ipTM=0.132 tol=6.94
2024-12-08 10:25:58,185 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=47.5 pTM=0.212 ipTM=0.144 tol=31.7
2024-12-08 10:26:38,873 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=45.9 pTM=0.226 ipTM=0.209 tol=42.7
2024-12-08 10:27:19,442 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=47.3 pTM=0.254 ipTM=0.307 tol=11
2024-12-08 10:27:59,967 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=47.1 pTM=0.24 ipTM=0.27 tol=11.7
2024-12-08 10:28:40,504 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=47.4 pTM=0.262 ipTM=0.335 tol=14.2
2024-12-08 10:29:21,061 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=48.6 pTM=0.274 ipTM=0.341 tol=13.3
2024-12-08 10:30:01,737 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=47.2 pTM=0.271 ipTM=0.345 tol=10.7
2024-12-08 10:30:42,369 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=48 pTM=0.263 ipTM=0.331 tol=13.6
2024-12-08 10:31:23,013 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=47.2 pTM=0.264 ipTM=0.323 tol=19.8
2024-12-08 10:32:03,610 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=46 pTM=0.244 ipTM=0.292 tol=14
2024-12-08 10:32:44,206 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=46.6 pTM=0.236 ipTM=0.291 tol=10.3
2024-12-08 10:33:24,792 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=44.5 pTM=0.231 ipTM=0.269 tol=7.47
2024-12-08 10:34:05,433 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=45 pTM=0.233 ipTM=0.299 tol=10.5
2024-12-08 10:34:46,021 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=48.7 pTM=0.271 ipTM=0.336 tol=12.7
2024-12-08 10:35:26,732 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=46.7 pTM=0.265 ipTM=0.335 tol=9.49
2024-12-08 10:36:07,416 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=45.1 pTM=0.242 ipTM=0.301 tol=5.86
2024-12-08 10:36:48,043 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=46.1 pTM=0.257 ipTM=0.318 tol=9.03
2024-12-08 10:37:28,702 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=45 pTM=0.239 ipTM=0.296 tol=8.35
2024-12-08 10:38:09,381 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=44.4 pTM=0.233 ipTM=0.288 tol=8.77
2024-12-08 10:38:50,024 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=44.7 pTM=0.235 ipTM=0.275 tol=7.42
2024-12-08 10:39:30,657 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=46.4 pTM=0.266 ipTM=0.347 tol=4.18
2024-12-08 10:40:11,274 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=46.5 pTM=0.259 ipTM=0.321 tol=8.09
2024-12-08 10:40:51,892 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=44.8 pTM=0.236 ipTM=0.296 tol=7.92
2024-12-08 10:40:51,893 alphafold2_multimer_v3_model_4_seed_000 took 1260.0s (30 recycles)
2024-12-08 10:41:33,176 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=53.5 pTM=0.274 ipTM=0.137
2024-12-08 10:42:13,393 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=54.5 pTM=0.279 ipTM=0.244 tol=37.7
2024-12-08 10:42:53,644 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=51.5 pTM=0.267 ipTM=0.171 tol=8.2
2024-12-08 10:43:33,967 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=52.5 pTM=0.266 ipTM=0.157 tol=11.4
2024-12-08 10:44:14,319 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=52.3 pTM=0.26 ipTM=0.203 tol=9.97
2024-12-08 10:44:54,663 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=52.2 pTM=0.258 ipTM=0.156 tol=7.23
2024-12-08 10:45:34,972 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=52.3 pTM=0.259 ipTM=0.242 tol=14.2
2024-12-08 10:46:15,226 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=54.5 pTM=0.266 ipTM=0.306 tol=9.3
2024-12-08 10:46:55,458 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=53.5 pTM=0.265 ipTM=0.267 tol=5.2
2024-12-08 10:47:35,704 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=53.2 pTM=0.264 ipTM=0.291 tol=3.19
2024-12-08 10:48:15,978 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=53.6 pTM=0.267 ipTM=0.303 tol=4.67
2024-12-08 10:48:56,239 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=53.8 pTM=0.27 ipTM=0.308 tol=8.75
2024-12-08 10:49:36,567 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=54 pTM=0.261 ipTM=0.301 tol=5.23
2024-12-08 10:50:16,892 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=54.2 pTM=0.267 ipTM=0.307 tol=7.99
2024-12-08 10:50:57,212 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=54.2 pTM=0.263 ipTM=0.318 tol=4.93
2024-12-08 10:51:37,610 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=53.9 pTM=0.258 ipTM=0.317 tol=6.49
2024-12-08 10:52:17,960 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=54 pTM=0.26 ipTM=0.315 tol=7.2
2024-12-08 10:52:58,239 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=54.1 pTM=0.261 ipTM=0.314 tol=6.16
2024-12-08 10:53:38,541 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=54.2 pTM=0.263 ipTM=0.307 tol=4.15
2024-12-08 10:54:18,805 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=54.1 pTM=0.262 ipTM=0.309 tol=2.63
2024-12-08 10:54:59,065 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=53.7 pTM=0.263 ipTM=0.303 tol=2.86
2024-12-08 10:55:39,340 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=53.7 pTM=0.262 ipTM=0.301 tol=2.96
2024-12-08 10:56:19,647 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=52.5 pTM=0.26 ipTM=0.288 tol=6.59
2024-12-08 10:57:00,015 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=53.2 pTM=0.261 ipTM=0.302 tol=5.58
2024-12-08 10:57:40,413 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=53.7 pTM=0.26 ipTM=0.297 tol=5.72
2024-12-08 10:58:20,807 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=52.3 pTM=0.252 ipTM=0.259 tol=4.24
2024-12-08 10:59:01,206 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=52.5 pTM=0.257 ipTM=0.259 tol=6.36
2024-12-08 10:59:41,571 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=53.5 pTM=0.264 ipTM=0.297 tol=6.69
2024-12-08 11:00:22,012 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=52.4 pTM=0.258 ipTM=0.204 tol=5.43
2024-12-08 11:01:02,459 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=51.8 pTM=0.264 ipTM=0.172 tol=11.7
2024-12-08 11:01:42,945 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=50.6 pTM=0.246 ipTM=0.147 tol=10.8
2024-12-08 11:01:42,946 alphafold2_multimer_v3_model_5_seed_000 took 1250.1s (30 recycles)
2024-12-08 11:01:43,896 reranking models by 'multimer' metric
2024-12-08 11:01:47,246 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-08 11:03:19,299 Relaxation took 95.4s
2024-12-08 11:03:19,299 rank_001_alphafold2_multimer_v3_model_3_seed_000 pLDDT=55.7 pTM=0.295 ipTM=0.321
2024-12-08 11:04:51,679 Relaxation took 92.4s
2024-12-08 11:04:51,680 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=50.8 pTM=0.256 ipTM=0.324
2024-12-08 11:06:18,334 Relaxation took 86.7s
2024-12-08 11:06:18,334 rank_003_alphafold2_multimer_v3_model_4_seed_000 pLDDT=44.8 pTM=0.236 ipTM=0.296
2024-12-08 11:08:36,297 Relaxation took 138.0s
2024-12-08 11:08:36,298 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=50.6 pTM=0.246 ipTM=0.147
2024-12-08 11:10:13,919 Relaxation took 97.6s
2024-12-08 11:10:13,919 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=52.3 pTM=0.219 ipTM=0.137
2024-12-08 11:10:16,677 Done