2024-12-08 09:46:02,392 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-08 09:46:02,698 Running on GPU
2024-12-08 09:46:06,597 Found 6 citations for tools or databases
2024-12-08 09:46:06,597 Query 1/1: RNF41_BHLHA15 (length 506)
2024-12-08 09:46:06,913 Sleeping for 7s. Reason: PENDING
2024-12-08 09:46:14,167 Sleeping for 10s. Reason: RUNNING
2024-12-08 09:46:24,431 Sleeping for 8s. Reason: RUNNING
2024-12-08 09:46:32,684 Sleeping for 7s. Reason: RUNNING
2024-12-08 09:46:39,940 Sleeping for 6s. Reason: RUNNING
2024-12-08 09:46:46,190 Sleeping for 9s. Reason: RUNNING
2024-12-08 09:46:55,452 Sleeping for 6s. Reason: RUNNING
2024-12-08 09:47:01,706 Sleeping for 7s. Reason: RUNNING
2024-12-08 09:47:08,961 Sleeping for 7s. Reason: RUNNING
2024-12-08 09:47:16,218 Sleeping for 5s. Reason: RUNNING
2024-12-08 09:47:21,473 Sleeping for 10s. Reason: RUNNING
2024-12-08 09:47:31,735 Sleeping for 5s. Reason: RUNNING
2024-12-08 09:47:36,985 Sleeping for 7s. Reason: RUNNING
2024-12-08 09:47:44,249 Sleeping for 8s. Reason: RUNNING
2024-12-08 09:47:52,513 Sleeping for 7s. Reason: RUNNING
2024-12-08 09:48:01,254 Sleeping for 5s. Reason: PENDING
2024-12-08 09:48:06,509 Sleeping for 10s. Reason: RUNNING
2024-12-08 09:48:16,767 Sleeping for 5s. Reason: RUNNING
2024-12-08 09:48:22,020 Sleeping for 6s. Reason: RUNNING
2024-12-08 09:48:28,280 Sleeping for 8s. Reason: RUNNING
2024-12-08 09:48:36,538 Sleeping for 6s. Reason: RUNNING
2024-12-08 09:48:42,802 Sleeping for 10s. Reason: RUNNING
2024-12-08 09:48:53,060 Sleeping for 9s. Reason: RUNNING
2024-12-08 09:49:04,644 Setting max_seq=508, max_extra_seq=2048
2024-12-08 09:51:37,946 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=70.3 pTM=0.315 ipTM=0.0864
2024-12-08 09:51:44,914 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=70 pTM=0.333 ipTM=0.102 tol=11.1
2024-12-08 09:51:51,873 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=69 pTM=0.319 ipTM=0.107 tol=7.41
2024-12-08 09:51:58,828 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=69.2 pTM=0.323 ipTM=0.105 tol=5.96
2024-12-08 09:52:05,775 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=69.5 pTM=0.327 ipTM=0.11 tol=3.99
2024-12-08 09:52:12,733 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=69.6 pTM=0.329 ipTM=0.107 tol=5.67
2024-12-08 09:52:19,690 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=69.3 pTM=0.327 ipTM=0.101 tol=3.95
2024-12-08 09:52:26,654 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=68.9 pTM=0.321 ipTM=0.101 tol=3.15
2024-12-08 09:52:33,612 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=68.9 pTM=0.318 ipTM=0.101 tol=3.3
2024-12-08 09:52:40,567 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=69.2 pTM=0.326 ipTM=0.101 tol=7.54
2024-12-08 09:52:47,552 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=68.9 pTM=0.325 ipTM=0.0967 tol=7.63
2024-12-08 09:52:54,515 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=68.8 pTM=0.325 ipTM=0.101 tol=4.16
2024-12-08 09:53:01,469 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=69.1 pTM=0.319 ipTM=0.0938 tol=4.54
2024-12-08 09:53:08,442 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=69.1 pTM=0.319 ipTM=0.0995 tol=4.48
2024-12-08 09:53:15,415 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=69.2 pTM=0.322 ipTM=0.0975 tol=5.17
2024-12-08 09:53:22,376 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=69 pTM=0.327 ipTM=0.0991 tol=3.88
2024-12-08 09:53:29,345 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=69.1 pTM=0.323 ipTM=0.0952 tol=3.3
2024-12-08 09:53:36,312 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=69.2 pTM=0.327 ipTM=0.0975 tol=4.76
2024-12-08 09:53:43,293 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=69.2 pTM=0.324 ipTM=0.0909 tol=3.94
2024-12-08 09:53:50,267 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=68.7 pTM=0.319 ipTM=0.0978 tol=2.18
2024-12-08 09:53:57,246 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=69.1 pTM=0.317 ipTM=0.0984 tol=4.38
2024-12-08 09:54:04,204 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=68.8 pTM=0.321 ipTM=0.0997 tol=3.2
2024-12-08 09:54:11,167 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=69.1 pTM=0.32 ipTM=0.0953 tol=2.8
2024-12-08 09:54:18,138 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=68.8 pTM=0.316 ipTM=0.0999 tol=2.93
2024-12-08 09:54:25,120 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=69.4 pTM=0.324 ipTM=0.0958 tol=4.96
2024-12-08 09:54:32,079 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=69.2 pTM=0.321 ipTM=0.0995 tol=2.24
2024-12-08 09:54:39,051 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=69.2 pTM=0.323 ipTM=0.0957 tol=1.75
2024-12-08 09:54:46,016 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=69.1 pTM=0.324 ipTM=0.0972 tol=3.07
2024-12-08 09:54:52,986 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=69.2 pTM=0.323 ipTM=0.0978 tol=2.8
2024-12-08 09:54:59,960 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=69 pTM=0.322 ipTM=0.103 tol=1.67
2024-12-08 09:55:06,911 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=68.9 pTM=0.319 ipTM=0.106 tol=2.75
2024-12-08 09:55:06,912 alphafold2_multimer_v3_model_1_seed_000 took 357.3s (30 recycles)
2024-12-08 09:55:14,059 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=69.2 pTM=0.307 ipTM=0.0771
2024-12-08 09:55:21,022 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=70.3 pTM=0.322 ipTM=0.0846 tol=11
2024-12-08 09:55:27,979 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=69.1 pTM=0.315 ipTM=0.0867 tol=10.8
2024-12-08 09:55:34,939 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=68.2 pTM=0.319 ipTM=0.0911 tol=10.6
2024-12-08 09:55:41,903 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=67.6 pTM=0.321 ipTM=0.0997 tol=10
2024-12-08 09:55:48,855 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=67.7 pTM=0.321 ipTM=0.103 tol=6.39
2024-12-08 09:55:55,798 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=68.4 pTM=0.327 ipTM=0.113 tol=4.82
2024-12-08 09:56:02,738 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=68.1 pTM=0.321 ipTM=0.122 tol=5.46
2024-12-08 09:56:09,700 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=68.1 pTM=0.319 ipTM=0.117 tol=3.94
2024-12-08 09:56:16,659 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=68.6 pTM=0.326 ipTM=0.123 tol=1.88
2024-12-08 09:56:23,619 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=68.4 pTM=0.326 ipTM=0.122 tol=2.07
2024-12-08 09:56:30,564 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=68.6 pTM=0.327 ipTM=0.126 tol=3.12
2024-12-08 09:56:37,526 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=68.3 pTM=0.32 ipTM=0.124 tol=1.95
2024-12-08 09:56:44,492 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=68.7 pTM=0.321 ipTM=0.127 tol=2.15
2024-12-08 09:56:51,458 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=68.9 pTM=0.328 ipTM=0.126 tol=4.43
2024-12-08 09:56:58,396 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=68.8 pTM=0.329 ipTM=0.127 tol=4.68
2024-12-08 09:57:05,345 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=68.6 pTM=0.327 ipTM=0.129 tol=1.83
2024-12-08 09:57:12,289 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=68.8 pTM=0.33 ipTM=0.13 tol=1.36
2024-12-08 09:57:19,239 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=68.8 pTM=0.329 ipTM=0.13 tol=1.15
2024-12-08 09:57:26,189 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=68.5 pTM=0.322 ipTM=0.128 tol=1.54
2024-12-08 09:57:33,137 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=68.7 pTM=0.322 ipTM=0.135 tol=2.66
2024-12-08 09:57:40,073 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=68.2 pTM=0.319 ipTM=0.13 tol=3.45
2024-12-08 09:57:47,016 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=68.5 pTM=0.322 ipTM=0.134 tol=3.96
2024-12-08 09:57:53,962 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=68.3 pTM=0.314 ipTM=0.125 tol=1.79
2024-12-08 09:58:00,914 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=68.9 pTM=0.325 ipTM=0.134 tol=2.39
2024-12-08 09:58:07,863 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=68.7 pTM=0.321 ipTM=0.134 tol=1.58
2024-12-08 09:58:14,819 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=69.2 pTM=0.326 ipTM=0.133 tol=1.32
2024-12-08 09:58:21,772 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=69.3 pTM=0.332 ipTM=0.136 tol=4.39
2024-12-08 09:58:28,730 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=69 pTM=0.326 ipTM=0.136 tol=2.93
2024-12-08 09:58:35,681 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=68.6 pTM=0.322 ipTM=0.133 tol=2.88
2024-12-08 09:58:42,622 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=68.4 pTM=0.318 ipTM=0.133 tol=0.904
2024-12-08 09:58:42,622 alphafold2_multimer_v3_model_2_seed_000 took 215.5s (30 recycles)
2024-12-08 09:58:49,764 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=67.1 pTM=0.306 ipTM=0.0836
2024-12-08 09:58:56,735 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=67.4 pTM=0.322 ipTM=0.098 tol=30.1
2024-12-08 09:59:03,714 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=67.9 pTM=0.32 ipTM=0.0958 tol=3.64
2024-12-08 09:59:10,678 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=67.9 pTM=0.319 ipTM=0.0876 tol=5.2
2024-12-08 09:59:17,657 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=67.9 pTM=0.317 ipTM=0.0811 tol=12.2
2024-12-08 09:59:24,635 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=67.1 pTM=0.317 ipTM=0.0785 tol=9.99
2024-12-08 09:59:31,605 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=66.7 pTM=0.325 ipTM=0.0828 tol=20.2
2024-12-08 09:59:38,560 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=67.3 pTM=0.317 ipTM=0.0854 tol=6.94
2024-12-08 09:59:45,525 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=67.2 pTM=0.314 ipTM=0.0876 tol=4.46
2024-12-08 09:59:52,467 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=67.8 pTM=0.321 ipTM=0.0887 tol=2.6
2024-12-08 09:59:59,412 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=67.6 pTM=0.321 ipTM=0.0889 tol=2.46
2024-12-08 10:00:06,364 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=67.2 pTM=0.32 ipTM=0.0892 tol=3.04
2024-12-08 10:00:13,318 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=66.9 pTM=0.314 ipTM=0.0865 tol=3.05
2024-12-08 10:00:20,276 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=67.2 pTM=0.314 ipTM=0.0869 tol=3.04
2024-12-08 10:00:27,241 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=67.1 pTM=0.321 ipTM=0.0867 tol=2.76
2024-12-08 10:00:34,204 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=66 pTM=0.323 ipTM=0.0906 tol=8.25
2024-12-08 10:00:41,149 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=66.6 pTM=0.323 ipTM=0.0876 tol=5.37
2024-12-08 10:00:48,104 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=66.8 pTM=0.323 ipTM=0.0864 tol=3.44
2024-12-08 10:00:55,079 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=67.1 pTM=0.326 ipTM=0.0873 tol=2.77
2024-12-08 10:01:02,057 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=66.9 pTM=0.315 ipTM=0.0873 tol=2.72
2024-12-08 10:01:09,018 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=67.3 pTM=0.314 ipTM=0.0864 tol=1.51
2024-12-08 10:01:15,994 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=67.4 pTM=0.313 ipTM=0.0861 tol=1.37
2024-12-08 10:01:22,947 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=67.3 pTM=0.316 ipTM=0.0867 tol=2.21
2024-12-08 10:01:29,907 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=67.4 pTM=0.314 ipTM=0.0871 tol=1.81
2024-12-08 10:01:36,884 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=67.6 pTM=0.32 ipTM=0.0864 tol=1.88
2024-12-08 10:01:43,845 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=67.2 pTM=0.314 ipTM=0.0859 tol=2.6
2024-12-08 10:01:50,799 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=67.1 pTM=0.316 ipTM=0.0873 tol=1.99
2024-12-08 10:01:57,766 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=67.4 pTM=0.319 ipTM=0.087 tol=1.96
2024-12-08 10:02:04,723 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=67.2 pTM=0.32 ipTM=0.0876 tol=1.54
2024-12-08 10:02:11,673 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=66.8 pTM=0.317 ipTM=0.088 tol=2.4
2024-12-08 10:02:18,627 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=66.6 pTM=0.315 ipTM=0.0878 tol=3.94
2024-12-08 10:02:18,628 alphafold2_multimer_v3_model_3_seed_000 took 215.8s (30 recycles)
2024-12-08 10:02:25,785 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=69.2 pTM=0.303 ipTM=0.0731
2024-12-08 10:02:32,796 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=68.8 pTM=0.311 ipTM=0.0743 tol=12.5
2024-12-08 10:02:39,767 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=68 pTM=0.308 ipTM=0.0827 tol=33.1
2024-12-08 10:02:46,729 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=67.1 pTM=0.311 ipTM=0.0897 tol=7.8
2024-12-08 10:02:53,685 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=66.6 pTM=0.315 ipTM=0.0918 tol=8.07
2024-12-08 10:03:00,640 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=66.5 pTM=0.319 ipTM=0.145 tol=13.4
2024-12-08 10:03:07,603 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=66 pTM=0.325 ipTM=0.103 tol=7.93
2024-12-08 10:03:14,567 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=66.9 pTM=0.319 ipTM=0.116 tol=11.4
2024-12-08 10:03:21,518 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=66 pTM=0.318 ipTM=0.134 tol=5.54
2024-12-08 10:03:28,477 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=66.7 pTM=0.324 ipTM=0.142 tol=3.85
2024-12-08 10:03:35,430 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=66.8 pTM=0.324 ipTM=0.15 tol=2.05
2024-12-08 10:03:42,387 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=66.1 pTM=0.322 ipTM=0.121 tol=2.1
2024-12-08 10:03:49,350 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=66.8 pTM=0.32 ipTM=0.159 tol=3.48
2024-12-08 10:03:56,285 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=66.1 pTM=0.319 ipTM=0.139 tol=2.48
2024-12-08 10:04:03,227 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=67.1 pTM=0.322 ipTM=0.139 tol=2.79
2024-12-08 10:04:10,174 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=66.7 pTM=0.327 ipTM=0.134 tol=3.26
2024-12-08 10:04:17,122 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=67.1 pTM=0.326 ipTM=0.153 tol=4.26
2024-12-08 10:04:24,066 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=67 pTM=0.327 ipTM=0.141 tol=5.05
2024-12-08 10:04:31,023 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=67.1 pTM=0.325 ipTM=0.145 tol=4.08
2024-12-08 10:04:37,968 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=66.2 pTM=0.318 ipTM=0.135 tol=2.93
2024-12-08 10:04:44,909 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=66.8 pTM=0.317 ipTM=0.138 tol=2.7
2024-12-08 10:04:51,864 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=66.1 pTM=0.318 ipTM=0.141 tol=3.93
2024-12-08 10:04:58,815 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=66.4 pTM=0.318 ipTM=0.138 tol=2.21
2024-12-08 10:05:05,763 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=65.8 pTM=0.316 ipTM=0.126 tol=2.29
2024-12-08 10:05:12,703 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=66.8 pTM=0.324 ipTM=0.143 tol=2.85
2024-12-08 10:05:19,660 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=66.1 pTM=0.319 ipTM=0.136 tol=3.43
2024-12-08 10:05:26,595 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=66.9 pTM=0.323 ipTM=0.152 tol=2.14
2024-12-08 10:05:33,549 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=66.1 pTM=0.323 ipTM=0.133 tol=1.83
2024-12-08 10:05:40,502 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=66.9 pTM=0.324 ipTM=0.148 tol=1.77
2024-12-08 10:05:47,458 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=65.9 pTM=0.321 ipTM=0.128 tol=2.46
2024-12-08 10:05:54,422 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=66.4 pTM=0.318 ipTM=0.139 tol=1.75
2024-12-08 10:05:54,423 alphafold2_multimer_v3_model_4_seed_000 took 215.6s (30 recycles)
2024-12-08 10:06:01,589 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=65.2 pTM=0.307 ipTM=0.0875
2024-12-08 10:06:08,544 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=66.1 pTM=0.311 ipTM=0.0852 tol=13.3
2024-12-08 10:06:15,512 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=66.1 pTM=0.317 ipTM=0.0881 tol=8.15
2024-12-08 10:06:22,462 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=65.9 pTM=0.321 ipTM=0.111 tol=6.67
2024-12-08 10:06:29,421 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=65.6 pTM=0.331 ipTM=0.111 tol=17.2
2024-12-08 10:06:36,387 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=65.9 pTM=0.323 ipTM=0.095 tol=12.1
2024-12-08 10:06:43,352 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=66.2 pTM=0.329 ipTM=0.103 tol=7.28
2024-12-08 10:06:50,316 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=66.8 pTM=0.324 ipTM=0.0958 tol=6.75
2024-12-08 10:06:57,285 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=65.8 pTM=0.322 ipTM=0.0929 tol=5.04
2024-12-08 10:07:04,247 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=66.6 pTM=0.324 ipTM=0.0964 tol=5.42
2024-12-08 10:07:11,219 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=65.9 pTM=0.324 ipTM=0.0942 tol=4.61
2024-12-08 10:07:18,175 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=65.9 pTM=0.324 ipTM=0.107 tol=7.31
2024-12-08 10:07:25,127 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=65.8 pTM=0.328 ipTM=0.115 tol=14.2
2024-12-08 10:07:32,085 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=66.4 pTM=0.325 ipTM=0.0967 tol=11.2
2024-12-08 10:07:39,039 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=66.4 pTM=0.325 ipTM=0.0974 tol=7.87
2024-12-08 10:07:45,994 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=66.5 pTM=0.327 ipTM=0.0986 tol=4.16
2024-12-08 10:07:52,960 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=65.9 pTM=0.327 ipTM=0.0975 tol=5.21
2024-12-08 10:07:59,918 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=66.2 pTM=0.326 ipTM=0.0997 tol=5.46
2024-12-08 10:08:06,881 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=65.8 pTM=0.325 ipTM=0.0988 tol=6.05
2024-12-08 10:08:13,839 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=66 pTM=0.321 ipTM=0.103 tol=6.88
2024-12-08 10:08:20,788 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=65.7 pTM=0.329 ipTM=0.119 tol=13.9
2024-12-08 10:08:27,744 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=65.9 pTM=0.321 ipTM=0.0966 tol=13.1
2024-12-08 10:08:34,706 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=65.5 pTM=0.323 ipTM=0.0962 tol=4.49
2024-12-08 10:08:41,651 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=66.2 pTM=0.317 ipTM=0.0986 tol=7.03
2024-12-08 10:08:48,594 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=65.9 pTM=0.323 ipTM=0.0981 tol=3.9
2024-12-08 10:08:55,544 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=65.5 pTM=0.321 ipTM=0.0995 tol=5.24
2024-12-08 10:09:02,506 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=65.9 pTM=0.328 ipTM=0.101 tol=10.2
2024-12-08 10:09:09,455 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=66.3 pTM=0.325 ipTM=0.1 tol=8.15
2024-12-08 10:09:16,411 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=65.9 pTM=0.33 ipTM=0.11 tol=10.1
2024-12-08 10:09:23,369 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=66.3 pTM=0.324 ipTM=0.097 tol=9.82
2024-12-08 10:09:30,335 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=65.5 pTM=0.322 ipTM=0.0957 tol=3.93
2024-12-08 10:09:30,336 alphafold2_multimer_v3_model_5_seed_000 took 215.7s (30 recycles)
2024-12-08 10:09:30,512 reranking models by 'multimer' metric
2024-12-08 10:09:33,065 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-08 10:10:03,179 Relaxation took 32.7s
2024-12-08 10:10:03,179 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=66.4 pTM=0.318 ipTM=0.139
2024-12-08 10:10:14,978 Relaxation took 11.8s
2024-12-08 10:10:14,978 rank_002_alphafold2_multimer_v3_model_2_seed_000 pLDDT=68.4 pTM=0.318 ipTM=0.133
2024-12-08 10:11:31,354 Relaxation took 76.4s
2024-12-08 10:11:31,354 rank_003_alphafold2_multimer_v3_model_1_seed_000 pLDDT=68.9 pTM=0.319 ipTM=0.106
2024-12-08 10:11:55,746 Relaxation took 24.4s
2024-12-08 10:11:55,746 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=65.5 pTM=0.322 ipTM=0.0957
2024-12-08 10:12:23,062 Relaxation took 27.3s
2024-12-08 10:12:23,063 rank_005_alphafold2_multimer_v3_model_3_seed_000 pLDDT=66.6 pTM=0.315 ipTM=0.0878
2024-12-08 10:12:24,052 Done