2024-12-08 09:46:51,416 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-08 09:46:51,719 Running on GPU
2024-12-08 09:46:52,648 Found 6 citations for tools or databases
2024-12-08 09:46:52,648 Query 1/1: RNF41_CREB3 (length 688)
2024-12-08 09:46:52,934 Sleeping for 10s. Reason: PENDING
2024-12-08 09:47:03,191 Sleeping for 8s. Reason: RUNNING
2024-12-08 09:47:11,450 Sleeping for 5s. Reason: RUNNING
2024-12-08 09:47:16,709 Sleeping for 5s. Reason: RUNNING
2024-12-08 09:47:21,964 Sleeping for 7s. Reason: RUNNING
2024-12-08 09:47:29,219 Sleeping for 6s. Reason: RUNNING
2024-12-08 09:47:35,474 Sleeping for 10s. Reason: RUNNING
2024-12-08 09:47:45,742 Sleeping for 6s. Reason: RUNNING
2024-12-08 09:47:51,998 Sleeping for 7s. Reason: RUNNING
2024-12-08 09:47:59,253 Sleeping for 10s. Reason: RUNNING
2024-12-08 09:48:09,516 Sleeping for 7s. Reason: RUNNING
2024-12-08 09:48:16,775 Sleeping for 7s. Reason: RUNNING
2024-12-08 09:48:24,031 Sleeping for 9s. Reason: RUNNING
2024-12-08 09:48:33,289 Sleeping for 5s. Reason: RUNNING
2024-12-08 09:48:38,545 Sleeping for 7s. Reason: RUNNING
2024-12-08 09:48:47,279 Sleeping for 9s. Reason: PENDING
2024-12-08 09:48:56,537 Sleeping for 6s. Reason: RUNNING
2024-12-08 09:49:02,802 Sleeping for 8s. Reason: RUNNING
2024-12-08 09:49:11,062 Sleeping for 10s. Reason: RUNNING
2024-12-08 09:49:21,325 Sleeping for 6s. Reason: RUNNING
2024-12-08 09:49:27,596 Sleeping for 7s. Reason: RUNNING
2024-12-08 09:49:34,850 Sleeping for 8s. Reason: RUNNING
2024-12-08 09:49:43,104 Sleeping for 10s. Reason: RUNNING
2024-12-08 09:49:55,653 Setting max_seq=508, max_extra_seq=2048
2024-12-08 09:51:57,527 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=58.6 pTM=0.26 ipTM=0.114
2024-12-08 09:52:06,266 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=60.8 pTM=0.263 ipTM=0.113 tol=13.1
2024-12-08 09:52:15,018 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=61.7 pTM=0.267 ipTM=0.111 tol=9.92
2024-12-08 09:52:23,768 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=60.4 pTM=0.264 ipTM=0.111 tol=8.02
2024-12-08 09:52:32,541 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=61.3 pTM=0.263 ipTM=0.111 tol=8.06
2024-12-08 09:52:41,294 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=63 pTM=0.362 ipTM=0.418 tol=19.8
2024-12-08 09:52:50,041 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=64.4 pTM=0.386 ipTM=0.449 tol=7.25
2024-12-08 09:52:58,784 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=64.6 pTM=0.387 ipTM=0.454 tol=4.23
2024-12-08 09:53:07,528 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=64.7 pTM=0.389 ipTM=0.456 tol=3.82
2024-12-08 09:53:16,288 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=64.8 pTM=0.395 ipTM=0.47 tol=4.04
2024-12-08 09:53:25,052 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=64.3 pTM=0.392 ipTM=0.46 tol=6.41
2024-12-08 09:53:33,819 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=64.8 pTM=0.392 ipTM=0.461 tol=4.59
2024-12-08 09:53:42,579 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=64.8 pTM=0.392 ipTM=0.463 tol=2.88
2024-12-08 09:53:51,331 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=64.6 pTM=0.389 ipTM=0.458 tol=2.33
2024-12-08 09:54:00,110 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=64.6 pTM=0.395 ipTM=0.463 tol=5.05
2024-12-08 09:54:08,882 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=64.7 pTM=0.395 ipTM=0.46 tol=4.61
2024-12-08 09:54:17,657 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=64.8 pTM=0.396 ipTM=0.466 tol=4.11
2024-12-08 09:54:26,430 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=64.9 pTM=0.394 ipTM=0.458 tol=2.89
2024-12-08 09:54:35,200 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=64.6 pTM=0.397 ipTM=0.462 tol=3.51
2024-12-08 09:54:43,973 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=64.8 pTM=0.395 ipTM=0.458 tol=3.68
2024-12-08 09:54:52,760 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=64.9 pTM=0.397 ipTM=0.462 tol=2.7
2024-12-08 09:55:01,533 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=64.7 pTM=0.395 ipTM=0.459 tol=3.45
2024-12-08 09:55:10,319 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=64.7 pTM=0.395 ipTM=0.459 tol=4.78
2024-12-08 09:55:19,095 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=64.6 pTM=0.392 ipTM=0.452 tol=3.61
2024-12-08 09:55:27,868 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=64.7 pTM=0.394 ipTM=0.457 tol=2.36
2024-12-08 09:55:36,651 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=64.7 pTM=0.396 ipTM=0.461 tol=2.37
2024-12-08 09:55:45,435 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=64.8 pTM=0.395 ipTM=0.462 tol=2.73
2024-12-08 09:55:54,217 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=64.8 pTM=0.395 ipTM=0.459 tol=2.27
2024-12-08 09:56:02,997 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=64.7 pTM=0.395 ipTM=0.46 tol=1.52
2024-12-08 09:56:11,772 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=64.9 pTM=0.396 ipTM=0.463 tol=1.48
2024-12-08 09:56:20,555 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=64.8 pTM=0.392 ipTM=0.458 tol=5.55
2024-12-08 09:56:20,556 alphafold2_multimer_v3_model_1_seed_000 took 380.1s (30 recycles)
2024-12-08 09:56:29,688 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=57.7 pTM=0.257 ipTM=0.1
2024-12-08 09:56:38,521 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=60 pTM=0.262 ipTM=0.111 tol=26.5
2024-12-08 09:56:47,352 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=60.7 pTM=0.264 ipTM=0.113 tol=11.4
2024-12-08 09:56:56,147 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=59.6 pTM=0.309 ipTM=0.267 tol=27.3
2024-12-08 09:57:04,966 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=64.2 pTM=0.38 ipTM=0.428 tol=9.55
2024-12-08 09:57:13,799 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=64.1 pTM=0.386 ipTM=0.445 tol=10.2
2024-12-08 09:57:22,626 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=64.3 pTM=0.389 ipTM=0.446 tol=11.8
2024-12-08 09:57:31,440 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=64.8 pTM=0.39 ipTM=0.444 tol=3.96
2024-12-08 09:57:40,258 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=64.6 pTM=0.394 ipTM=0.449 tol=3.8
2024-12-08 09:57:49,075 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=64.8 pTM=0.396 ipTM=0.45 tol=3.57
2024-12-08 09:57:57,901 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=64.5 pTM=0.393 ipTM=0.448 tol=5.81
2024-12-08 09:58:06,717 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=64.7 pTM=0.393 ipTM=0.447 tol=3.81
2024-12-08 09:58:15,536 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=64.7 pTM=0.393 ipTM=0.449 tol=2.06
2024-12-08 09:58:24,354 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=64.6 pTM=0.389 ipTM=0.442 tol=2.62
2024-12-08 09:58:33,174 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=64.6 pTM=0.394 ipTM=0.448 tol=2.36
2024-12-08 09:58:41,988 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=64.4 pTM=0.394 ipTM=0.446 tol=3.44
2024-12-08 09:58:50,804 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=64.4 pTM=0.392 ipTM=0.448 tol=1.44
2024-12-08 09:58:59,624 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=64.4 pTM=0.392 ipTM=0.446 tol=2.07
2024-12-08 09:59:08,443 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=64.6 pTM=0.392 ipTM=0.446 tol=2.46
2024-12-08 09:59:17,267 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=64.6 pTM=0.393 ipTM=0.447 tol=2.76
2024-12-08 09:59:26,086 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=64.4 pTM=0.394 ipTM=0.448 tol=4.68
2024-12-08 09:59:34,907 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=64.2 pTM=0.39 ipTM=0.442 tol=2.28
2024-12-08 09:59:43,725 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=64.4 pTM=0.392 ipTM=0.443 tol=1.79
2024-12-08 09:59:52,544 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=64.2 pTM=0.389 ipTM=0.44 tol=1.23
2024-12-08 10:00:01,364 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=64.4 pTM=0.389 ipTM=0.439 tol=2.34
2024-12-08 10:00:10,186 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=64.2 pTM=0.391 ipTM=0.443 tol=1.97
2024-12-08 10:00:19,013 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=64.4 pTM=0.389 ipTM=0.443 tol=2.27
2024-12-08 10:00:27,827 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=64.4 pTM=0.392 ipTM=0.446 tol=2.46
2024-12-08 10:00:36,646 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=64.2 pTM=0.389 ipTM=0.441 tol=2.69
2024-12-08 10:00:45,465 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=64.4 pTM=0.391 ipTM=0.443 tol=1.87
2024-12-08 10:00:54,285 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=64.4 pTM=0.39 ipTM=0.442 tol=1.98
2024-12-08 10:00:54,285 alphafold2_multimer_v3_model_2_seed_000 took 273.4s (30 recycles)
2024-12-08 10:01:03,404 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=62.3 pTM=0.367 ipTM=0.431
2024-12-08 10:01:12,196 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=63.6 pTM=0.392 ipTM=0.439 tol=15.5
2024-12-08 10:01:20,981 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=63.6 pTM=0.398 ipTM=0.469 tol=4.88
2024-12-08 10:01:29,783 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=63.8 pTM=0.389 ipTM=0.448 tol=3.21
2024-12-08 10:01:38,573 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=63.7 pTM=0.409 ipTM=0.479 tol=2.9
2024-12-08 10:01:47,376 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=64 pTM=0.391 ipTM=0.453 tol=2.22
2024-12-08 10:01:56,171 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=63.8 pTM=0.404 ipTM=0.471 tol=2.78
2024-12-08 10:02:04,974 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=64.1 pTM=0.398 ipTM=0.457 tol=2.19
2024-12-08 10:02:13,764 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=64.1 pTM=0.404 ipTM=0.467 tol=2.3
2024-12-08 10:02:22,560 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=64.1 pTM=0.399 ipTM=0.46 tol=2.75
2024-12-08 10:02:31,354 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=63.8 pTM=0.402 ipTM=0.467 tol=4.9
2024-12-08 10:02:40,157 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=64.2 pTM=0.403 ipTM=0.469 tol=4.55
2024-12-08 10:02:48,952 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=64.1 pTM=0.405 ipTM=0.472 tol=1.96
2024-12-08 10:02:57,750 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=63.9 pTM=0.393 ipTM=0.454 tol=3.29
2024-12-08 10:03:06,552 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=64.2 pTM=0.405 ipTM=0.471 tol=1.61
2024-12-08 10:03:15,349 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=64.1 pTM=0.4 ipTM=0.465 tol=2.15
2024-12-08 10:03:24,150 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=64.1 pTM=0.402 ipTM=0.469 tol=2.42
2024-12-08 10:03:32,950 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=64.1 pTM=0.397 ipTM=0.458 tol=2.11
2024-12-08 10:03:41,746 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=64.1 pTM=0.402 ipTM=0.468 tol=2.21
2024-12-08 10:03:50,549 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=64.1 pTM=0.402 ipTM=0.466 tol=1.26
2024-12-08 10:03:59,352 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=64.1 pTM=0.399 ipTM=0.465 tol=0.951
2024-12-08 10:04:08,148 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=64.1 pTM=0.401 ipTM=0.467 tol=1.31
2024-12-08 10:04:16,958 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=64.1 pTM=0.403 ipTM=0.469 tol=1.91
2024-12-08 10:04:25,753 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=64 pTM=0.404 ipTM=0.47 tol=1.59
2024-12-08 10:04:34,551 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=64.1 pTM=0.401 ipTM=0.466 tol=2.63
2024-12-08 10:04:43,349 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=63.9 pTM=0.403 ipTM=0.469 tol=1.9
2024-12-08 10:04:52,152 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=64 pTM=0.402 ipTM=0.468 tol=2.18
2024-12-08 10:05:00,954 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=64.2 pTM=0.407 ipTM=0.475 tol=1.76
2024-12-08 10:05:09,761 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=63.9 pTM=0.396 ipTM=0.459 tol=1.92
2024-12-08 10:05:18,560 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=64.1 pTM=0.402 ipTM=0.468 tol=2.26
2024-12-08 10:05:27,362 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=64.1 pTM=0.399 ipTM=0.462 tol=1.7
2024-12-08 10:05:27,363 alphafold2_multimer_v3_model_3_seed_000 took 272.8s (30 recycles)
2024-12-08 10:05:36,508 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=55 pTM=0.266 ipTM=0.14
2024-12-08 10:05:45,326 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=57.8 pTM=0.279 ipTM=0.189 tol=12
2024-12-08 10:05:54,154 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=58.2 pTM=0.275 ipTM=0.188 tol=7.41
2024-12-08 10:06:02,955 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=61.3 pTM=0.342 ipTM=0.379 tol=6.2
2024-12-08 10:06:11,756 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=63.1 pTM=0.37 ipTM=0.429 tol=5.75
2024-12-08 10:06:20,555 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=63.5 pTM=0.386 ipTM=0.456 tol=5.13
2024-12-08 10:06:29,347 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=63.8 pTM=0.398 ipTM=0.47 tol=5.18
2024-12-08 10:06:38,146 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=63.9 pTM=0.399 ipTM=0.469 tol=2.55
2024-12-08 10:06:46,948 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=64.5 pTM=0.407 ipTM=0.479 tol=3.49
2024-12-08 10:06:55,747 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=64.4 pTM=0.406 ipTM=0.479 tol=1.94
2024-12-08 10:07:04,543 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=64.1 pTM=0.404 ipTM=0.478 tol=4.54
2024-12-08 10:07:13,342 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=64.3 pTM=0.4 ipTM=0.472 tol=2.58
2024-12-08 10:07:22,133 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=64.1 pTM=0.407 ipTM=0.48 tol=6.36
2024-12-08 10:07:30,931 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=64.1 pTM=0.403 ipTM=0.471 tol=5.74
2024-12-08 10:07:39,733 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=64.4 pTM=0.411 ipTM=0.488 tol=2.71
2024-12-08 10:07:48,532 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=64.3 pTM=0.406 ipTM=0.48 tol=2.79
2024-12-08 10:07:57,325 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=64.4 pTM=0.409 ipTM=0.486 tol=2.49
2024-12-08 10:08:06,125 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=64.4 pTM=0.406 ipTM=0.481 tol=2.01
2024-12-08 10:08:14,925 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=64.5 pTM=0.411 ipTM=0.487 tol=3.85
2024-12-08 10:08:23,732 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=64.4 pTM=0.406 ipTM=0.479 tol=3.63
2024-12-08 10:08:32,537 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=64.3 pTM=0.404 ipTM=0.478 tol=3.38
2024-12-08 10:08:41,342 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=64.3 pTM=0.405 ipTM=0.478 tol=1.52
2024-12-08 10:08:50,144 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=64.4 pTM=0.408 ipTM=0.482 tol=1.63
2024-12-08 10:08:58,949 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=64.1 pTM=0.4 ipTM=0.47 tol=1.08
2024-12-08 10:09:07,745 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=64.2 pTM=0.402 ipTM=0.473 tol=1.06
2024-12-08 10:09:16,539 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=64.4 pTM=0.408 ipTM=0.48 tol=1.25
2024-12-08 10:09:25,338 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=64.3 pTM=0.402 ipTM=0.473 tol=1.17
2024-12-08 10:09:34,138 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=64.3 pTM=0.407 ipTM=0.481 tol=1.73
2024-12-08 10:09:42,931 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=64.3 pTM=0.404 ipTM=0.474 tol=2.63
2024-12-08 10:09:51,737 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=64.4 pTM=0.406 ipTM=0.479 tol=1.35
2024-12-08 10:10:00,528 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=64.2 pTM=0.402 ipTM=0.472 tol=1.56
2024-12-08 10:10:00,529 alphafold2_multimer_v3_model_4_seed_000 took 272.9s (30 recycles)
2024-12-08 10:10:09,661 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=55.7 pTM=0.303 ipTM=0.239
2024-12-08 10:10:18,497 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=56.9 pTM=0.274 ipTM=0.148 tol=8.91
2024-12-08 10:10:27,326 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=57.1 pTM=0.303 ipTM=0.228 tol=11.5
2024-12-08 10:10:36,151 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=56.8 pTM=0.278 ipTM=0.151 tol=9.64
2024-12-08 10:10:44,973 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=57.8 pTM=0.314 ipTM=0.237 tol=4.6
2024-12-08 10:10:53,785 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=57.3 pTM=0.283 ipTM=0.16 tol=7.84
2024-12-08 10:11:02,610 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=62.6 pTM=0.384 ipTM=0.441 tol=24.6
2024-12-08 10:11:11,424 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=63.6 pTM=0.395 ipTM=0.458 tol=5.55
2024-12-08 10:11:20,236 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=63.4 pTM=0.398 ipTM=0.464 tol=3.9
2024-12-08 10:11:29,056 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=63.5 pTM=0.396 ipTM=0.459 tol=2.43
2024-12-08 10:11:37,865 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=63.4 pTM=0.4 ipTM=0.468 tol=2.27
2024-12-08 10:11:46,682 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=63.6 pTM=0.396 ipTM=0.46 tol=3.82
2024-12-08 10:11:55,500 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=63.5 pTM=0.402 ipTM=0.469 tol=3.82
2024-12-08 10:12:04,315 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=63.3 pTM=0.395 ipTM=0.457 tol=3.89
2024-12-08 10:12:13,134 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=63.5 pTM=0.402 ipTM=0.47 tol=3.24
2024-12-08 10:12:21,954 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=63.5 pTM=0.399 ipTM=0.466 tol=2.48
2024-12-08 10:12:30,771 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=63.6 pTM=0.406 ipTM=0.478 tol=2.64
2024-12-08 10:12:39,591 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=63.7 pTM=0.402 ipTM=0.469 tol=2.23
2024-12-08 10:12:48,410 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=63.6 pTM=0.406 ipTM=0.476 tol=4.07
2024-12-08 10:12:57,233 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=63.6 pTM=0.402 ipTM=0.47 tol=1.91
2024-12-08 10:13:06,060 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=63.7 pTM=0.399 ipTM=0.466 tol=4.39
2024-12-08 10:13:14,884 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=63.6 pTM=0.405 ipTM=0.477 tol=3.08
2024-12-08 10:13:23,704 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=63.6 pTM=0.399 ipTM=0.467 tol=4.16
2024-12-08 10:13:32,522 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=63.4 pTM=0.4 ipTM=0.471 tol=5.18
2024-12-08 10:13:41,333 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=63.4 pTM=0.397 ipTM=0.466 tol=8.09
2024-12-08 10:13:50,148 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=63.6 pTM=0.404 ipTM=0.476 tol=8.15
2024-12-08 10:13:58,966 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=63.7 pTM=0.401 ipTM=0.472 tol=6.95
2024-12-08 10:14:07,791 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=63.6 pTM=0.402 ipTM=0.472 tol=3.97
2024-12-08 10:14:16,615 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=63.7 pTM=0.398 ipTM=0.464 tol=4.54
2024-12-08 10:14:25,438 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=63.7 pTM=0.402 ipTM=0.475 tol=2.56
2024-12-08 10:14:34,263 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=63.8 pTM=0.401 ipTM=0.468 tol=3.45
2024-12-08 10:14:34,263 alphafold2_multimer_v3_model_5_seed_000 took 273.4s (30 recycles)
2024-12-08 10:14:34,569 reranking models by 'multimer' metric
2024-12-08 10:14:36,787 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-08 10:15:17,013 Relaxation took 42.4s
2024-12-08 10:15:17,013 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=64.2 pTM=0.402 ipTM=0.472
2024-12-08 10:15:56,750 Relaxation took 39.7s
2024-12-08 10:15:56,750 rank_002_alphafold2_multimer_v3_model_5_seed_000 pLDDT=63.8 pTM=0.401 ipTM=0.468
2024-12-08 10:16:34,951 Relaxation took 38.2s
2024-12-08 10:16:34,951 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=64.1 pTM=0.399 ipTM=0.462
2024-12-08 10:17:02,148 Relaxation took 27.2s
2024-12-08 10:17:02,148 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=64.8 pTM=0.392 ipTM=0.458
2024-12-08 10:17:38,229 Relaxation took 36.1s
2024-12-08 10:17:38,229 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=64.4 pTM=0.39 ipTM=0.442
2024-12-08 10:17:39,643 Done