2024-12-08 10:30:07,719 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-08 10:30:08,091 Running on GPU
2024-12-08 10:30:11,347 Found 6 citations for tools or databases
2024-12-08 10:30:11,347 Query 1/1: RNF5_RHBDD1 (length 495)
2024-12-08 10:30:11,627 Sleeping for 7s. Reason: PENDING
2024-12-08 10:30:18,888 Sleeping for 9s. Reason: RUNNING
2024-12-08 10:30:28,147 Sleeping for 10s. Reason: RUNNING
2024-12-08 10:30:38,406 Sleeping for 9s. Reason: RUNNING
2024-12-08 10:30:47,673 Sleeping for 9s. Reason: RUNNING
2024-12-08 10:30:56,930 Sleeping for 8s. Reason: RUNNING
2024-12-08 10:31:05,185 Sleeping for 9s. Reason: RUNNING
2024-12-08 10:31:14,442 Sleeping for 9s. Reason: RUNNING
2024-12-08 10:31:23,694 Sleeping for 5s. Reason: RUNNING
2024-12-08 10:31:28,947 Sleeping for 10s. Reason: RUNNING
2024-12-08 10:31:39,212 Sleeping for 5s. Reason: RUNNING
2024-12-08 10:31:44,470 Sleeping for 8s. Reason: RUNNING
2024-12-08 10:31:53,906 Sleeping for 8s. Reason: PENDING
2024-12-08 10:32:02,163 Sleeping for 6s. Reason: RUNNING
2024-12-08 10:32:08,416 Sleeping for 7s. Reason: RUNNING
2024-12-08 10:32:15,669 Sleeping for 10s. Reason: RUNNING
2024-12-08 10:32:25,928 Sleeping for 10s. Reason: RUNNING
2024-12-08 10:32:36,189 Sleeping for 5s. Reason: RUNNING
2024-12-08 10:32:43,462 Setting max_seq=508, max_extra_seq=2048
2024-12-08 10:36:12,324 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=59.1 pTM=0.52 ipTM=0.293
2024-12-08 10:36:19,887 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=59.4 pTM=0.506 ipTM=0.194 tol=3.22
2024-12-08 10:36:27,425 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=58.9 pTM=0.5 ipTM=0.179 tol=3
2024-12-08 10:36:34,972 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=59.3 pTM=0.494 ipTM=0.163 tol=2.38
2024-12-08 10:36:42,515 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=59.1 pTM=0.492 ipTM=0.159 tol=3.82
2024-12-08 10:36:50,057 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=59.2 pTM=0.49 ipTM=0.156 tol=2.92
2024-12-08 10:36:57,589 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=59 pTM=0.49 ipTM=0.156 tol=1.52
2024-12-08 10:37:05,134 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=59.4 pTM=0.491 ipTM=0.158 tol=0.9
2024-12-08 10:37:12,670 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=59.3 pTM=0.492 ipTM=0.162 tol=0.96
2024-12-08 10:37:20,205 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=59.2 pTM=0.49 ipTM=0.156 tol=0.713
2024-12-08 10:37:27,733 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=59 pTM=0.49 ipTM=0.155 tol=0.757
2024-12-08 10:37:35,270 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=59.1 pTM=0.488 ipTM=0.151 tol=0.517
2024-12-08 10:37:42,797 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=59.2 pTM=0.49 ipTM=0.154 tol=0.693
2024-12-08 10:37:50,341 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=58.9 pTM=0.49 ipTM=0.153 tol=0.642
2024-12-08 10:37:57,873 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=59.1 pTM=0.492 ipTM=0.16 tol=0.672
2024-12-08 10:38:05,414 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=59.2 pTM=0.489 ipTM=0.153 tol=0.569
2024-12-08 10:38:12,957 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=59.2 pTM=0.492 ipTM=0.16 tol=0.75
2024-12-08 10:38:20,493 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=58.9 pTM=0.491 ipTM=0.158 tol=0.705
2024-12-08 10:38:28,037 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=59.3 pTM=0.493 ipTM=0.161 tol=0.439
2024-12-08 10:38:28,038 alphafold2_multimer_v3_model_1_seed_000 took 337.7s (18 recycles)
2024-12-08 10:38:35,777 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=58.2 pTM=0.542 ipTM=0.496
2024-12-08 10:38:43,334 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=59.1 pTM=0.514 ipTM=0.218 tol=7.05
2024-12-08 10:38:50,868 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=57.9 pTM=0.503 ipTM=0.189 tol=4.64
2024-12-08 10:38:58,412 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=58.8 pTM=0.506 ipTM=0.242 tol=2.77
2024-12-08 10:39:05,946 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=58.8 pTM=0.503 ipTM=0.205 tol=2.01
2024-12-08 10:39:13,501 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=57.9 pTM=0.494 ipTM=0.167 tol=5.75
2024-12-08 10:39:21,042 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=57.9 pTM=0.504 ipTM=0.232 tol=5.6
2024-12-08 10:39:28,590 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=57.7 pTM=0.493 ipTM=0.176 tol=6.49
2024-12-08 10:39:36,129 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=58.4 pTM=0.499 ipTM=0.22 tol=4.23
2024-12-08 10:39:43,670 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=58.2 pTM=0.496 ipTM=0.212 tol=4.52
2024-12-08 10:39:51,212 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=58.1 pTM=0.491 ipTM=0.172 tol=2.89
2024-12-08 10:39:58,749 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=58.5 pTM=0.493 ipTM=0.198 tol=2.43
2024-12-08 10:40:06,290 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=58.8 pTM=0.493 ipTM=0.19 tol=1.43
2024-12-08 10:40:13,826 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=58.2 pTM=0.49 ipTM=0.164 tol=1.56
2024-12-08 10:40:21,364 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=58.2 pTM=0.494 ipTM=0.18 tol=2.07
2024-12-08 10:40:28,906 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=57.7 pTM=0.489 ipTM=0.19 tol=5.29
2024-12-08 10:40:36,447 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=59.2 pTM=0.508 ipTM=0.344 tol=4.83
2024-12-08 10:40:43,984 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=58.2 pTM=0.499 ipTM=0.198 tol=2.63
2024-12-08 10:40:51,536 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=58.1 pTM=0.492 ipTM=0.168 tol=4.01
2024-12-08 10:40:59,073 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=59.1 pTM=0.505 ipTM=0.274 tol=4.77
2024-12-08 10:41:06,612 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=58.5 pTM=0.494 ipTM=0.205 tol=1.38
2024-12-08 10:41:14,147 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=58.2 pTM=0.491 ipTM=0.174 tol=1.13
2024-12-08 10:41:21,684 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=58.2 pTM=0.491 ipTM=0.207 tol=1.76
2024-12-08 10:41:29,221 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=57.9 pTM=0.487 ipTM=0.163 tol=1.14
2024-12-08 10:41:36,764 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=57.5 pTM=0.485 ipTM=0.156 tol=3.83
2024-12-08 10:41:44,317 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=58.1 pTM=0.487 ipTM=0.16 tol=3.14
2024-12-08 10:41:51,868 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=58 pTM=0.487 ipTM=0.156 tol=3.57
2024-12-08 10:41:59,411 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=58.3 pTM=0.49 ipTM=0.165 tol=3.59
2024-12-08 10:42:06,955 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=57.9 pTM=0.488 ipTM=0.158 tol=3.76
2024-12-08 10:42:14,492 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=58 pTM=0.488 ipTM=0.162 tol=2.17
2024-12-08 10:42:22,038 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=58.2 pTM=0.487 ipTM=0.156 tol=3
2024-12-08 10:42:22,039 alphafold2_multimer_v3_model_2_seed_000 took 233.8s (30 recycles)
2024-12-08 10:42:29,811 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=58.4 pTM=0.522 ipTM=0.239
2024-12-08 10:42:37,379 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=58.9 pTM=0.535 ipTM=0.354 tol=9.59
2024-12-08 10:42:44,922 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=57.5 pTM=0.52 ipTM=0.243 tol=3.33
2024-12-08 10:42:52,468 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=57 pTM=0.511 ipTM=0.221 tol=2.77
2024-12-08 10:43:00,005 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=56.8 pTM=0.511 ipTM=0.225 tol=2.56
2024-12-08 10:43:07,554 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=57 pTM=0.511 ipTM=0.221 tol=1.92
2024-12-08 10:43:15,086 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=56.2 pTM=0.504 ipTM=0.211 tol=4.27
2024-12-08 10:43:22,630 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=56.8 pTM=0.512 ipTM=0.227 tol=2.77
2024-12-08 10:43:30,166 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=56.2 pTM=0.504 ipTM=0.209 tol=2.61
2024-12-08 10:43:37,718 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=56.8 pTM=0.513 ipTM=0.224 tol=2.63
2024-12-08 10:43:45,260 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=56.4 pTM=0.503 ipTM=0.205 tol=2.52
2024-12-08 10:43:52,802 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=56.5 pTM=0.507 ipTM=0.215 tol=2.53
2024-12-08 10:44:00,339 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=56.6 pTM=0.506 ipTM=0.21 tol=3.68
2024-12-08 10:44:07,885 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=56.4 pTM=0.51 ipTM=0.221 tol=2.45
2024-12-08 10:44:15,425 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=56.8 pTM=0.507 ipTM=0.216 tol=2.95
2024-12-08 10:44:22,972 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=57 pTM=0.515 ipTM=0.231 tol=5.61
2024-12-08 10:44:30,511 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=56.9 pTM=0.507 ipTM=0.213 tol=4.1
2024-12-08 10:44:38,052 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=57.2 pTM=0.511 ipTM=0.224 tol=2.2
2024-12-08 10:44:45,595 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=57.2 pTM=0.506 ipTM=0.211 tol=1.45
2024-12-08 10:44:53,136 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=57 pTM=0.515 ipTM=0.233 tol=2.5
2024-12-08 10:45:00,666 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=56.8 pTM=0.509 ipTM=0.224 tol=1.65
2024-12-08 10:45:08,196 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=57.2 pTM=0.514 ipTM=0.234 tol=1.35
2024-12-08 10:45:15,736 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=57.2 pTM=0.508 ipTM=0.219 tol=2.11
2024-12-08 10:45:23,268 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=57.3 pTM=0.515 ipTM=0.236 tol=2.54
2024-12-08 10:45:30,804 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=57.2 pTM=0.507 ipTM=0.215 tol=1.95
2024-12-08 10:45:38,335 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=57.5 pTM=0.517 ipTM=0.24 tol=1.82
2024-12-08 10:45:45,870 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=57.3 pTM=0.51 ipTM=0.224 tol=0.943
2024-12-08 10:45:53,402 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=57.2 pTM=0.508 ipTM=0.217 tol=1.45
2024-12-08 10:46:00,934 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=57.5 pTM=0.511 ipTM=0.226 tol=1.09
2024-12-08 10:46:08,459 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=57 pTM=0.509 ipTM=0.219 tol=0.673
2024-12-08 10:46:15,991 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=57.1 pTM=0.509 ipTM=0.22 tol=1.69
2024-12-08 10:46:15,992 alphafold2_multimer_v3_model_3_seed_000 took 233.7s (30 recycles)
2024-12-08 10:46:23,762 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=57.4 pTM=0.532 ipTM=0.498
2024-12-08 10:46:31,342 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=57.5 pTM=0.503 ipTM=0.188 tol=10.5
2024-12-08 10:46:38,893 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=57.7 pTM=0.513 ipTM=0.214 tol=9.62
2024-12-08 10:46:46,452 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=57.2 pTM=0.513 ipTM=0.218 tol=5.67
2024-12-08 10:46:54,002 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=57.1 pTM=0.518 ipTM=0.229 tol=4.84
2024-12-08 10:47:01,554 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=56.9 pTM=0.516 ipTM=0.225 tol=4.21
2024-12-08 10:47:09,095 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=56.8 pTM=0.523 ipTM=0.245 tol=4.59
2024-12-08 10:47:16,640 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=57.2 pTM=0.526 ipTM=0.257 tol=1.61
2024-12-08 10:47:24,179 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=56.8 pTM=0.536 ipTM=0.281 tol=2.63
2024-12-08 10:47:31,736 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=56.9 pTM=0.517 ipTM=0.23 tol=5.24
2024-12-08 10:47:39,279 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=56.8 pTM=0.518 ipTM=0.232 tol=3.62
2024-12-08 10:47:46,821 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=57.2 pTM=0.523 ipTM=0.25 tol=1.76
2024-12-08 10:47:54,365 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=56.9 pTM=0.529 ipTM=0.264 tol=2.59
2024-12-08 10:48:01,915 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=56.8 pTM=0.515 ipTM=0.222 tol=8.33
2024-12-08 10:48:09,453 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=56.4 pTM=0.524 ipTM=0.248 tol=5.19
2024-12-08 10:48:16,999 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=56.6 pTM=0.524 ipTM=0.246 tol=5.32
2024-12-08 10:48:24,538 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=57.1 pTM=0.525 ipTM=0.252 tol=3.57
2024-12-08 10:48:32,078 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=56.7 pTM=0.53 ipTM=0.268 tol=1.81
2024-12-08 10:48:39,615 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=56.8 pTM=0.532 ipTM=0.268 tol=2.14
2024-12-08 10:48:47,162 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=56.8 pTM=0.524 ipTM=0.247 tol=2.86
2024-12-08 10:48:54,698 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=56.6 pTM=0.528 ipTM=0.261 tol=2.55
2024-12-08 10:49:02,242 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=56.7 pTM=0.523 ipTM=0.246 tol=3.18
2024-12-08 10:49:09,786 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=56.5 pTM=0.521 ipTM=0.242 tol=2.2
2024-12-08 10:49:17,328 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=56.8 pTM=0.521 ipTM=0.238 tol=5.23
2024-12-08 10:49:24,870 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=56.8 pTM=0.52 ipTM=0.235 tol=3.72
2024-12-08 10:49:32,403 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=57 pTM=0.535 ipTM=0.28 tol=3.33
2024-12-08 10:49:39,944 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=56.8 pTM=0.536 ipTM=0.276 tol=4.27
2024-12-08 10:49:47,486 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=57.3 pTM=0.531 ipTM=0.264 tol=3.51
2024-12-08 10:49:55,034 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=56.8 pTM=0.524 ipTM=0.251 tol=1.27
2024-12-08 10:50:02,575 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=56.7 pTM=0.523 ipTM=0.245 tol=4.22
2024-12-08 10:50:10,114 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=56.7 pTM=0.528 ipTM=0.259 tol=4.11
2024-12-08 10:50:10,114 alphafold2_multimer_v3_model_4_seed_000 took 233.9s (30 recycles)
2024-12-08 10:50:17,872 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=57.5 pTM=0.512 ipTM=0.212
2024-12-08 10:50:25,419 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=58 pTM=0.53 ipTM=0.346 tol=5.88
2024-12-08 10:50:32,954 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=56.6 pTM=0.52 ipTM=0.231 tol=2.05
2024-12-08 10:50:40,494 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=56.9 pTM=0.509 ipTM=0.203 tol=3.25
2024-12-08 10:50:48,034 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=56.9 pTM=0.513 ipTM=0.213 tol=3.18
2024-12-08 10:50:55,574 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=56.8 pTM=0.521 ipTM=0.268 tol=3.66
2024-12-08 10:51:03,110 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=56.2 pTM=0.521 ipTM=0.235 tol=5.61
2024-12-08 10:51:10,647 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=55.9 pTM=0.507 ipTM=0.2 tol=4.19
2024-12-08 10:51:18,177 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=57.3 pTM=0.521 ipTM=0.239 tol=3.34
2024-12-08 10:51:25,720 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=57 pTM=0.514 ipTM=0.222 tol=2.15
2024-12-08 10:51:33,259 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=56.5 pTM=0.512 ipTM=0.217 tol=1.71
2024-12-08 10:51:40,796 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=56.4 pTM=0.509 ipTM=0.212 tol=2.78
2024-12-08 10:51:48,333 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=56.6 pTM=0.513 ipTM=0.218 tol=1.63
2024-12-08 10:51:55,869 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=56.7 pTM=0.507 ipTM=0.205 tol=2.56
2024-12-08 10:52:03,407 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=56.7 pTM=0.514 ipTM=0.227 tol=2.58
2024-12-08 10:52:10,946 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=56.4 pTM=0.511 ipTM=0.243 tol=2.93
2024-12-08 10:52:18,481 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=56.3 pTM=0.512 ipTM=0.217 tol=2.38
2024-12-08 10:52:26,021 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=55.8 pTM=0.5 ipTM=0.186 tol=3.36
2024-12-08 10:52:33,553 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=57.2 pTM=0.514 ipTM=0.223 tol=5.69
2024-12-08 10:52:41,092 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=56.5 pTM=0.511 ipTM=0.216 tol=3.14
2024-12-08 10:52:48,620 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=56.2 pTM=0.51 ipTM=0.214 tol=3.37
2024-12-08 10:52:56,155 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=55.8 pTM=0.505 ipTM=0.201 tol=2.41
2024-12-08 10:53:03,690 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=56.4 pTM=0.511 ipTM=0.215 tol=2.2
2024-12-08 10:53:11,225 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=56.3 pTM=0.504 ipTM=0.205 tol=2.8
2024-12-08 10:53:18,759 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=56.6 pTM=0.514 ipTM=0.289 tol=2.1
2024-12-08 10:53:26,297 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=56.1 pTM=0.513 ipTM=0.222 tol=5.19
2024-12-08 10:53:33,825 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=56.1 pTM=0.511 ipTM=0.221 tol=2.98
2024-12-08 10:53:41,358 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=56.3 pTM=0.513 ipTM=0.219 tol=3.88
2024-12-08 10:53:48,886 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=56.5 pTM=0.512 ipTM=0.223 tol=2.49
2024-12-08 10:53:56,418 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=56.2 pTM=0.507 ipTM=0.21 tol=2.3
2024-12-08 10:54:03,951 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=56.3 pTM=0.515 ipTM=0.243 tol=3.31
2024-12-08 10:54:03,951 alphafold2_multimer_v3_model_5_seed_000 took 233.6s (30 recycles)
2024-12-08 10:54:04,167 reranking models by 'multimer' metric
2024-12-08 10:54:07,019 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-08 10:54:53,620 Relaxation took 49.5s
2024-12-08 10:54:53,620 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=56.7 pTM=0.528 ipTM=0.259
2024-12-08 10:55:11,776 Relaxation took 18.2s
2024-12-08 10:55:11,776 rank_002_alphafold2_multimer_v3_model_5_seed_000 pLDDT=56.3 pTM=0.515 ipTM=0.243
2024-12-08 10:55:31,915 Relaxation took 20.1s
2024-12-08 10:55:31,915 rank_003_alphafold2_multimer_v3_model_3_seed_000 pLDDT=57.1 pTM=0.509 ipTM=0.22
2024-12-08 10:56:16,137 Relaxation took 44.2s
2024-12-08 10:56:16,137 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=59.3 pTM=0.493 ipTM=0.161
2024-12-08 10:56:46,595 Relaxation took 30.5s
2024-12-08 10:56:46,596 rank_005_alphafold2_multimer_v3_model_2_seed_000 pLDDT=58.2 pTM=0.487 ipTM=0.156
2024-12-08 10:56:47,764 Done