2024-12-08 10:50:41,765 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-08 10:50:42,071 Running on GPU
2024-12-08 10:50:44,113 Found 6 citations for tools or databases
2024-12-08 10:50:44,114 Query 1/1: SART1_RPL7A (length 1066)
2024-12-08 10:50:44,383 Sleeping for 8s. Reason: PENDING
2024-12-08 10:50:52,637 Sleeping for 5s. Reason: RUNNING
2024-12-08 10:50:57,895 Sleeping for 6s. Reason: RUNNING
2024-12-08 10:51:04,150 Sleeping for 10s. Reason: RUNNING
2024-12-08 10:51:14,411 Sleeping for 10s. Reason: RUNNING
2024-12-08 10:51:24,679 Sleeping for 6s. Reason: RUNNING
2024-12-08 10:51:30,932 Sleeping for 5s. Reason: RUNNING
2024-12-08 10:51:36,183 Sleeping for 5s. Reason: RUNNING
2024-12-08 10:51:42,609 Sleeping for 10s. Reason: PENDING
2024-12-08 10:51:52,874 Sleeping for 10s. Reason: RUNNING
2024-12-08 10:52:03,137 Sleeping for 5s. Reason: RUNNING
2024-12-08 10:52:08,392 Sleeping for 5s. Reason: RUNNING
2024-12-08 10:52:13,645 Sleeping for 7s. Reason: RUNNING
2024-12-08 10:52:23,168 Setting max_seq=508, max_extra_seq=2048
2024-12-08 10:55:13,554 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=49.6 pTM=0.276 ipTM=0.223
2024-12-08 10:55:38,643 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=49.1 pTM=0.289 ipTM=0.21 tol=15.9
2024-12-08 10:56:03,815 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=49.3 pTM=0.286 ipTM=0.166 tol=7.37
2024-12-08 10:56:29,057 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=49 pTM=0.289 ipTM=0.198 tol=6.65
2024-12-08 10:56:54,355 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=49.2 pTM=0.289 ipTM=0.194 tol=4.85
2024-12-08 10:57:19,706 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=48.9 pTM=0.289 ipTM=0.212 tol=2.99
2024-12-08 10:57:45,066 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=48.8 pTM=0.29 ipTM=0.21 tol=2.92
2024-12-08 10:58:10,460 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=49 pTM=0.289 ipTM=0.226 tol=2.64
2024-12-08 10:58:35,855 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=49 pTM=0.29 ipTM=0.213 tol=2.81
2024-12-08 10:59:01,241 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=48.7 pTM=0.289 ipTM=0.203 tol=3.1
2024-12-08 10:59:26,641 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=48.8 pTM=0.289 ipTM=0.205 tol=2.8
2024-12-08 10:59:52,054 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=48.9 pTM=0.289 ipTM=0.199 tol=3.6
2024-12-08 11:00:17,495 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=49 pTM=0.29 ipTM=0.216 tol=2.76
2024-12-08 11:00:42,929 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=48.9 pTM=0.289 ipTM=0.205 tol=2.31
2024-12-08 11:01:08,306 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=48.5 pTM=0.288 ipTM=0.2 tol=2.88
2024-12-08 11:01:33,726 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=49 pTM=0.289 ipTM=0.204 tol=4.24
2024-12-08 11:01:59,130 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=49 pTM=0.289 ipTM=0.21 tol=4.54
2024-12-08 11:02:24,525 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=49 pTM=0.289 ipTM=0.216 tol=4.3
2024-12-08 11:02:49,940 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=49.4 pTM=0.288 ipTM=0.207 tol=6.17
2024-12-08 11:03:15,349 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=48.9 pTM=0.287 ipTM=0.201 tol=3
2024-12-08 11:03:40,759 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=49.2 pTM=0.289 ipTM=0.207 tol=3.05
2024-12-08 11:04:06,189 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=49 pTM=0.287 ipTM=0.2 tol=2.83
2024-12-08 11:04:31,628 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=49.2 pTM=0.287 ipTM=0.19 tol=4.11
2024-12-08 11:04:57,079 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=48.8 pTM=0.29 ipTM=0.198 tol=8.77
2024-12-08 11:05:22,505 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=48.7 pTM=0.289 ipTM=0.196 tol=6.71
2024-12-08 11:05:47,911 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=48.7 pTM=0.289 ipTM=0.205 tol=2.95
2024-12-08 11:06:13,308 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=48.7 pTM=0.289 ipTM=0.201 tol=2.16
2024-12-08 11:06:38,679 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=49.1 pTM=0.29 ipTM=0.19 tol=1.77
2024-12-08 11:07:04,016 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=49 pTM=0.29 ipTM=0.195 tol=2.98
2024-12-08 11:07:29,368 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=49.1 pTM=0.291 ipTM=0.198 tol=2.21
2024-12-08 11:07:54,737 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=48.9 pTM=0.29 ipTM=0.178 tol=1.47
2024-12-08 11:07:54,738 alphafold2_multimer_v3_model_1_seed_000 took 926.8s (30 recycles)
2024-12-08 11:08:20,885 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=45.3 pTM=0.28 ipTM=0.186
2024-12-08 11:08:46,356 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=46.7 pTM=0.288 ipTM=0.177 tol=11
2024-12-08 11:09:11,790 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=47.1 pTM=0.291 ipTM=0.179 tol=10.4
2024-12-08 11:09:37,232 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=46.6 pTM=0.293 ipTM=0.183 tol=9.98
2024-12-08 11:10:02,651 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=46.8 pTM=0.295 ipTM=0.193 tol=6.66
2024-12-08 11:10:28,022 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=46.6 pTM=0.298 ipTM=0.205 tol=4.95
2024-12-08 11:10:53,384 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=46.6 pTM=0.297 ipTM=0.193 tol=5.21
2024-12-08 11:11:18,804 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=47 pTM=0.295 ipTM=0.196 tol=3.81
2024-12-08 11:11:44,237 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=46.7 pTM=0.299 ipTM=0.191 tol=3.93
2024-12-08 11:12:09,698 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=46.5 pTM=0.295 ipTM=0.189 tol=4.91
2024-12-08 11:12:35,169 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=47 pTM=0.295 ipTM=0.187 tol=3.51
2024-12-08 11:13:00,651 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=47.2 pTM=0.295 ipTM=0.194 tol=4.55
2024-12-08 11:13:26,126 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=47.2 pTM=0.295 ipTM=0.197 tol=9.48
2024-12-08 11:13:51,625 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=47.3 pTM=0.294 ipTM=0.198 tol=8.3
2024-12-08 11:14:17,150 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=46.6 pTM=0.291 ipTM=0.184 tol=8.41
2024-12-08 11:14:42,695 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=47.4 pTM=0.292 ipTM=0.193 tol=6.66
2024-12-08 11:15:08,238 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=47.3 pTM=0.293 ipTM=0.19 tol=4.11
2024-12-08 11:15:33,773 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=47.7 pTM=0.294 ipTM=0.195 tol=5.02
2024-12-08 11:15:59,298 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=47.9 pTM=0.292 ipTM=0.211 tol=3.41
2024-12-08 11:16:24,826 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=47.5 pTM=0.292 ipTM=0.203 tol=4.31
2024-12-08 11:16:50,348 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=47.6 pTM=0.292 ipTM=0.207 tol=3.55
2024-12-08 11:17:15,877 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=47.5 pTM=0.292 ipTM=0.207 tol=3.86
2024-12-08 11:17:41,387 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=47.6 pTM=0.293 ipTM=0.206 tol=5.41
2024-12-08 11:18:06,895 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=47 pTM=0.294 ipTM=0.205 tol=4.4
2024-12-08 11:18:32,411 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=46.9 pTM=0.292 ipTM=0.196 tol=3.26
2024-12-08 11:18:57,934 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=46.7 pTM=0.293 ipTM=0.193 tol=4.26
2024-12-08 11:19:23,470 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=46.8 pTM=0.291 ipTM=0.187 tol=5.8
2024-12-08 11:19:48,990 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=47.3 pTM=0.292 ipTM=0.185 tol=7.54
2024-12-08 11:20:14,502 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=47 pTM=0.291 ipTM=0.191 tol=3.87
2024-12-08 11:20:40,025 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=46.9 pTM=0.291 ipTM=0.19 tol=4.42
2024-12-08 11:21:05,553 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=46.7 pTM=0.291 ipTM=0.186 tol=4.97
2024-12-08 11:21:05,554 alphafold2_multimer_v3_model_2_seed_000 took 790.1s (30 recycles)
2024-12-08 11:21:31,974 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=47.6 pTM=0.266 ipTM=0.143
2024-12-08 11:21:57,661 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=47 pTM=0.27 ipTM=0.153 tol=12.7
2024-12-08 11:22:23,271 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=47.8 pTM=0.277 ipTM=0.163 tol=9.06
2024-12-08 11:22:48,835 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=47.7 pTM=0.283 ipTM=0.17 tol=7.49
2024-12-08 11:23:14,368 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=48.1 pTM=0.285 ipTM=0.165 tol=5.45
2024-12-08 11:23:39,880 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=47.9 pTM=0.286 ipTM=0.17 tol=4.72
2024-12-08 11:24:05,402 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=48.1 pTM=0.288 ipTM=0.165 tol=4.29
2024-12-08 11:24:30,924 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=48.2 pTM=0.29 ipTM=0.175 tol=4.44
2024-12-08 11:24:56,473 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=48.5 pTM=0.292 ipTM=0.194 tol=4.29
2024-12-08 11:25:22,066 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=48.3 pTM=0.289 ipTM=0.174 tol=5.17
2024-12-08 11:25:47,647 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=48.7 pTM=0.289 ipTM=0.176 tol=2.99
2024-12-08 11:26:13,257 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=48.4 pTM=0.289 ipTM=0.177 tol=1.82
2024-12-08 11:26:38,831 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=48.6 pTM=0.29 ipTM=0.18 tol=2.75
2024-12-08 11:27:04,400 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=48.7 pTM=0.289 ipTM=0.188 tol=3.78
2024-12-08 11:27:29,966 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=48.1 pTM=0.289 ipTM=0.195 tol=4.12
2024-12-08 11:27:55,499 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=48.8 pTM=0.292 ipTM=0.2 tol=4.29
2024-12-08 11:28:21,024 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=48.9 pTM=0.292 ipTM=0.216 tol=7.59
2024-12-08 11:28:46,542 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=49.2 pTM=0.294 ipTM=0.226 tol=6.28
2024-12-08 11:29:12,043 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=49.8 pTM=0.297 ipTM=0.259 tol=4.73
2024-12-08 11:29:37,522 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=49.9 pTM=0.299 ipTM=0.259 tol=2.26
2024-12-08 11:30:03,008 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=49.5 pTM=0.298 ipTM=0.249 tol=2.38
2024-12-08 11:30:28,486 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=49.7 pTM=0.299 ipTM=0.26 tol=2.54
2024-12-08 11:30:53,981 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=50 pTM=0.3 ipTM=0.25 tol=2.66
2024-12-08 11:31:19,461 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=49.9 pTM=0.299 ipTM=0.241 tol=2.35
2024-12-08 11:31:44,957 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=49.7 pTM=0.298 ipTM=0.234 tol=2.25
2024-12-08 11:32:10,443 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=49.6 pTM=0.301 ipTM=0.236 tol=1.86
2024-12-08 11:32:35,921 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=49.6 pTM=0.3 ipTM=0.236 tol=1.62
2024-12-08 11:33:01,414 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=50.1 pTM=0.3 ipTM=0.218 tol=1.84
2024-12-08 11:33:26,893 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=50 pTM=0.301 ipTM=0.216 tol=1.84
2024-12-08 11:33:52,370 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=49.9 pTM=0.3 ipTM=0.221 tol=1.96
2024-12-08 11:34:17,880 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=49.8 pTM=0.3 ipTM=0.219 tol=2.06
2024-12-08 11:34:17,881 alphafold2_multimer_v3_model_3_seed_000 took 791.6s (30 recycles)
2024-12-08 11:34:44,208 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=41.8 pTM=0.26 ipTM=0.153
2024-12-08 11:35:09,880 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=43.5 pTM=0.263 ipTM=0.129 tol=13.2
2024-12-08 11:35:35,557 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=43.6 pTM=0.264 ipTM=0.133 tol=8.69
2024-12-08 11:36:01,286 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=43.6 pTM=0.265 ipTM=0.135 tol=13.6
2024-12-08 11:36:26,981 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=43.4 pTM=0.27 ipTM=0.188 tol=15.9
2024-12-08 11:36:52,636 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=43.5 pTM=0.269 ipTM=0.142 tol=10.4
2024-12-08 11:37:18,305 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=43.8 pTM=0.269 ipTM=0.14 tol=5.71
2024-12-08 11:37:43,985 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=44.2 pTM=0.268 ipTM=0.139 tol=6.76
2024-12-08 11:38:09,654 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=44.2 pTM=0.269 ipTM=0.138 tol=8.3
2024-12-08 11:38:35,339 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=44.2 pTM=0.269 ipTM=0.139 tol=4.43
2024-12-08 11:39:00,996 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=43.9 pTM=0.267 ipTM=0.139 tol=8.31
2024-12-08 11:39:26,674 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=44.2 pTM=0.268 ipTM=0.14 tol=5.58
2024-12-08 11:39:52,351 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=44.3 pTM=0.269 ipTM=0.138 tol=5.39
2024-12-08 11:40:18,041 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=44.2 pTM=0.27 ipTM=0.139 tol=7.48
2024-12-08 11:40:43,737 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=43.9 pTM=0.269 ipTM=0.14 tol=6.55
2024-12-08 11:41:09,406 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=44.4 pTM=0.27 ipTM=0.141 tol=5.67
2024-12-08 11:41:35,094 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=44.6 pTM=0.271 ipTM=0.141 tol=7.71
2024-12-08 11:42:00,811 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=44.7 pTM=0.27 ipTM=0.141 tol=7.47
2024-12-08 11:42:26,476 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=44.9 pTM=0.271 ipTM=0.141 tol=2.59
2024-12-08 11:42:52,180 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=44.5 pTM=0.271 ipTM=0.179 tol=9.7
2024-12-08 11:43:17,850 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=44.6 pTM=0.288 ipTM=0.371 tol=16.4
2024-12-08 11:43:43,502 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=44.9 pTM=0.297 ipTM=0.451 tol=6.15
2024-12-08 11:44:09,123 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=45.5 pTM=0.309 ipTM=0.521 tol=7.84
2024-12-08 11:44:34,739 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=45.5 pTM=0.311 ipTM=0.532 tol=6.34
2024-12-08 11:45:00,355 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=45.2 pTM=0.311 ipTM=0.53 tol=4.26
2024-12-08 11:45:25,957 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=45.1 pTM=0.311 ipTM=0.521 tol=4.59
2024-12-08 11:45:51,565 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=44.9 pTM=0.307 ipTM=0.509 tol=4.73
2024-12-08 11:46:17,143 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=45.1 pTM=0.306 ipTM=0.494 tol=3.98
2024-12-08 11:46:42,707 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=44.9 pTM=0.307 ipTM=0.506 tol=4.29
2024-12-08 11:47:08,297 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=45 pTM=0.306 ipTM=0.5 tol=3.89
2024-12-08 11:47:33,860 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=45.1 pTM=0.307 ipTM=0.504 tol=3.34
2024-12-08 11:47:33,861 alphafold2_multimer_v3_model_4_seed_000 took 795.3s (30 recycles)
2024-12-08 11:48:00,213 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=45.9 pTM=0.263 ipTM=0.143
2024-12-08 11:48:25,821 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=46.1 pTM=0.272 ipTM=0.139 tol=10.5
2024-12-08 11:48:51,439 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=46.8 pTM=0.271 ipTM=0.143 tol=10.3
2024-12-08 11:49:17,063 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=47.2 pTM=0.275 ipTM=0.15 tol=7.27
2024-12-08 11:49:42,663 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=47.5 pTM=0.276 ipTM=0.154 tol=6.48
2024-12-08 11:50:08,267 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=47.4 pTM=0.277 ipTM=0.156 tol=4.88
2024-12-08 11:50:33,862 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=47.6 pTM=0.277 ipTM=0.153 tol=9.22
2024-12-08 11:50:59,461 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=47.6 pTM=0.277 ipTM=0.149 tol=9.54
2024-12-08 11:51:25,053 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=47.7 pTM=0.278 ipTM=0.149 tol=8.73
2024-12-08 11:51:50,611 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=47.4 pTM=0.277 ipTM=0.15 tol=4.97
2024-12-08 11:52:16,197 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=47.5 pTM=0.277 ipTM=0.151 tol=10.5
2024-12-08 11:52:41,794 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=47.3 pTM=0.276 ipTM=0.152 tol=5.43
2024-12-08 11:53:07,380 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=47.4 pTM=0.277 ipTM=0.154 tol=8.88
2024-12-08 11:53:32,976 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=47.5 pTM=0.277 ipTM=0.151 tol=11.6
2024-12-08 11:53:58,546 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=46.8 pTM=0.278 ipTM=0.156 tol=8.02
2024-12-08 11:54:24,133 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=47.4 pTM=0.279 ipTM=0.157 tol=3.5
2024-12-08 11:54:49,689 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=47.5 pTM=0.278 ipTM=0.151 tol=5.03
2024-12-08 11:55:15,261 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=47.4 pTM=0.278 ipTM=0.15 tol=6.32
2024-12-08 11:55:40,832 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=47.9 pTM=0.279 ipTM=0.151 tol=7.65
2024-12-08 11:56:06,404 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=47.7 pTM=0.279 ipTM=0.156 tol=4.24
2024-12-08 11:56:32,010 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=47.5 pTM=0.279 ipTM=0.16 tol=3.67
2024-12-08 11:56:57,579 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=47.5 pTM=0.279 ipTM=0.167 tol=4.12
2024-12-08 11:57:23,114 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=47.9 pTM=0.28 ipTM=0.173 tol=4.81
2024-12-08 11:57:48,644 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=47.9 pTM=0.281 ipTM=0.177 tol=3.08
2024-12-08 11:58:14,157 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=48.2 pTM=0.28 ipTM=0.182 tol=4.08
2024-12-08 11:58:39,669 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=48.2 pTM=0.281 ipTM=0.189 tol=2.98
2024-12-08 11:59:05,200 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=48.3 pTM=0.283 ipTM=0.205 tol=2.05
2024-12-08 11:59:30,705 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=48.7 pTM=0.284 ipTM=0.213 tol=5.91
2024-12-08 11:59:56,202 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=48.5 pTM=0.284 ipTM=0.215 tol=5.94
2024-12-08 12:00:21,711 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=48.4 pTM=0.282 ipTM=0.208 tol=2.73
2024-12-08 12:00:47,219 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=48.3 pTM=0.282 ipTM=0.208 tol=2.2
2024-12-08 12:00:47,220 alphafold2_multimer_v3_model_5_seed_000 took 792.7s (30 recycles)
2024-12-08 12:00:47,929 reranking models by 'multimer' metric
2024-12-08 12:00:50,739 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-08 12:02:29,313 Relaxation took 101.4s
2024-12-08 12:02:29,313 rank_001_alphafold2_multimer_v3_model_4_seed_000 pLDDT=45.1 pTM=0.307 ipTM=0.504
2024-12-08 12:03:33,028 Relaxation took 63.7s
2024-12-08 12:03:33,028 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=49.8 pTM=0.3 ipTM=0.219
2024-12-08 12:04:46,095 Relaxation took 73.1s
2024-12-08 12:04:46,095 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=48.3 pTM=0.282 ipTM=0.208
2024-12-08 12:05:59,651 Relaxation took 73.6s
2024-12-08 12:05:59,651 rank_004_alphafold2_multimer_v3_model_2_seed_000 pLDDT=46.7 pTM=0.291 ipTM=0.186
2024-12-08 12:07:13,630 Relaxation took 74.0s
2024-12-08 12:07:13,630 rank_005_alphafold2_multimer_v3_model_1_seed_000 pLDDT=48.9 pTM=0.29 ipTM=0.178
2024-12-08 12:07:15,572 Done