2024-12-11 13:24:12,969 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-11 13:24:14,596 Running on GPU
2024-12-11 13:24:18,964 Found 6 citations for tools or databases
2024-12-11 13:24:18,964 Query 1/1: SDCCAG3_AURKA (length 838)
2024-12-11 13:24:19,414 Sleeping for 5s. Reason: PENDING
2024-12-11 13:24:24,666 Sleeping for 8s. Reason: PENDING
2024-12-11 13:24:32,927 Sleeping for 7s. Reason: PENDING
2024-12-11 13:24:40,193 Sleeping for 10s. Reason: RUNNING
2024-12-11 13:24:50,449 Sleeping for 7s. Reason: RUNNING
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2024-12-11 13:25:05,971 Sleeping for 7s. Reason: RUNNING
2024-12-11 13:25:13,224 Sleeping for 8s. Reason: RUNNING
2024-12-11 13:25:21,489 Sleeping for 8s. Reason: RUNNING
2024-12-11 13:25:29,755 Sleeping for 8s. Reason: RUNNING
2024-12-11 13:25:38,013 Sleeping for 7s. Reason: RUNNING
2024-12-11 13:25:45,268 Sleeping for 10s. Reason: RUNNING
2024-12-11 13:25:55,528 Sleeping for 9s. Reason: RUNNING
2024-12-11 13:26:04,787 Sleeping for 6s. Reason: RUNNING
2024-12-11 13:26:11,040 Sleeping for 5s. Reason: RUNNING
2024-12-11 13:26:16,291 Sleeping for 5s. Reason: RUNNING
2024-12-11 13:26:21,542 Sleeping for 6s. Reason: RUNNING
2024-12-11 13:26:27,794 Sleeping for 7s. Reason: RUNNING
2024-12-11 13:26:35,049 Sleeping for 6s. Reason: RUNNING
2024-12-11 13:26:41,304 Sleeping for 5s. Reason: RUNNING
2024-12-11 13:26:46,566 Sleeping for 9s. Reason: RUNNING
2024-12-11 13:26:55,830 Sleeping for 7s. Reason: RUNNING
2024-12-11 13:27:03,090 Sleeping for 9s. Reason: RUNNING
2024-12-11 13:27:12,349 Sleeping for 8s. Reason: RUNNING
2024-12-11 13:27:20,604 Sleeping for 6s. Reason: RUNNING
2024-12-11 13:27:26,862 Sleeping for 10s. Reason: RUNNING
2024-12-11 13:27:38,762 Sleeping for 10s. Reason: PENDING
2024-12-11 13:27:49,029 Sleeping for 8s. Reason: RUNNING
2024-12-11 13:27:57,289 Sleeping for 9s. Reason: RUNNING
2024-12-11 13:28:06,557 Sleeping for 7s. Reason: RUNNING
2024-12-11 13:28:13,814 Sleeping for 5s. Reason: RUNNING
2024-12-11 13:28:19,068 Sleeping for 9s. Reason: RUNNING
2024-12-11 13:28:28,327 Sleeping for 5s. Reason: RUNNING
2024-12-11 13:28:33,587 Sleeping for 5s. Reason: RUNNING
2024-12-11 13:28:38,843 Sleeping for 6s. Reason: RUNNING
2024-12-11 13:28:45,098 Sleeping for 5s. Reason: RUNNING
2024-12-11 13:28:50,351 Sleeping for 9s. Reason: RUNNING
2024-12-11 13:28:59,627 Sleeping for 9s. Reason: RUNNING
2024-12-11 13:29:08,891 Sleeping for 6s. Reason: RUNNING
2024-12-11 13:29:15,148 Sleeping for 7s. Reason: RUNNING
2024-12-11 13:29:22,412 Sleeping for 9s. Reason: RUNNING
2024-12-11 13:29:34,172 Setting max_seq=508, max_extra_seq=2048
2024-12-11 13:32:15,273 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=50 pTM=0.4 ipTM=0.186
2024-12-11 13:32:29,877 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=50.2 pTM=0.395 ipTM=0.167 tol=14.3
2024-12-11 13:32:44,536 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=50.3 pTM=0.403 ipTM=0.356 tol=11.1
2024-12-11 13:32:59,254 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=49 pTM=0.401 ipTM=0.312 tol=8.79
2024-12-11 13:33:13,994 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=49.4 pTM=0.406 ipTM=0.343 tol=9.44
2024-12-11 13:33:28,740 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=48.2 pTM=0.401 ipTM=0.306 tol=7.21
2024-12-11 13:33:43,531 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=49 pTM=0.411 ipTM=0.366 tol=5.32
2024-12-11 13:33:58,321 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=48.4 pTM=0.404 ipTM=0.358 tol=6.15
2024-12-11 13:34:13,145 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=49.2 pTM=0.412 ipTM=0.418 tol=5.21
2024-12-11 13:34:27,961 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=49.1 pTM=0.409 ipTM=0.389 tol=4.18
2024-12-11 13:34:42,801 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=49.7 pTM=0.416 ipTM=0.436 tol=4.5
2024-12-11 13:34:57,629 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=48.8 pTM=0.409 ipTM=0.398 tol=3.97
2024-12-11 13:35:12,475 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=49.6 pTM=0.417 ipTM=0.429 tol=7.45
2024-12-11 13:35:27,310 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=48.7 pTM=0.411 ipTM=0.37 tol=5.71
2024-12-11 13:35:42,177 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=50.1 pTM=0.418 ipTM=0.437 tol=3.53
2024-12-11 13:35:57,035 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=49.2 pTM=0.413 ipTM=0.397 tol=3.4
2024-12-11 13:36:11,911 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=49.9 pTM=0.42 ipTM=0.446 tol=3.56
2024-12-11 13:36:26,778 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=49.6 pTM=0.417 ipTM=0.428 tol=1.87
2024-12-11 13:36:41,637 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=49.7 pTM=0.416 ipTM=0.423 tol=2.8
2024-12-11 13:36:56,492 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=48.9 pTM=0.412 ipTM=0.386 tol=2.53
2024-12-11 13:37:11,351 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=49.8 pTM=0.417 ipTM=0.428 tol=4.22
2024-12-11 13:37:26,212 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=49.3 pTM=0.411 ipTM=0.385 tol=3.31
2024-12-11 13:37:41,086 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=49.9 pTM=0.417 ipTM=0.427 tol=4.77
2024-12-11 13:37:55,959 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=49.3 pTM=0.413 ipTM=0.396 tol=3.22
2024-12-11 13:38:10,830 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=49.9 pTM=0.417 ipTM=0.442 tol=3.56
2024-12-11 13:38:25,710 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=49.5 pTM=0.408 ipTM=0.373 tol=4.59
2024-12-11 13:38:40,581 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=50.2 pTM=0.415 ipTM=0.415 tol=3.88
2024-12-11 13:38:55,454 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=49.6 pTM=0.413 ipTM=0.388 tol=2.94
2024-12-11 13:39:10,307 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=50.2 pTM=0.416 ipTM=0.431 tol=2.22
2024-12-11 13:39:25,170 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=49.3 pTM=0.414 ipTM=0.395 tol=3.51
2024-12-11 13:39:40,028 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=49.7 pTM=0.416 ipTM=0.416 tol=2.47
2024-12-11 13:39:40,029 alphafold2_multimer_v3_model_1_seed_000 took 602.1s (30 recycles)
2024-12-11 13:39:55,358 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=50.3 pTM=0.4 ipTM=0.325
2024-12-11 13:40:10,247 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=49.8 pTM=0.395 ipTM=0.254 tol=14.2
2024-12-11 13:40:25,117 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=49.7 pTM=0.399 ipTM=0.227 tol=15.1
2024-12-11 13:40:40,024 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=51 pTM=0.403 ipTM=0.321 tol=13.8
2024-12-11 13:40:54,879 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=50.1 pTM=0.401 ipTM=0.278 tol=12.3
2024-12-11 13:41:09,764 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=51.1 pTM=0.405 ipTM=0.307 tol=10.8
2024-12-11 13:41:24,641 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=49.9 pTM=0.399 ipTM=0.272 tol=10.3
2024-12-11 13:41:39,522 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=51.3 pTM=0.413 ipTM=0.294 tol=11.4
2024-12-11 13:41:54,379 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=50.1 pTM=0.405 ipTM=0.26 tol=5.68
2024-12-11 13:42:09,262 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=51.2 pTM=0.411 ipTM=0.269 tol=3.92
2024-12-11 13:42:24,122 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=50.2 pTM=0.402 ipTM=0.26 tol=4.07
2024-12-11 13:42:38,998 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=51.2 pTM=0.407 ipTM=0.277 tol=4.46
2024-12-11 13:42:53,863 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=50.5 pTM=0.405 ipTM=0.28 tol=3.85
2024-12-11 13:43:08,741 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=51.4 pTM=0.409 ipTM=0.298 tol=4.03
2024-12-11 13:43:23,612 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=50.2 pTM=0.4 ipTM=0.284 tol=3.97
2024-12-11 13:43:38,498 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=51.3 pTM=0.407 ipTM=0.315 tol=3.15
2024-12-11 13:43:53,377 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=50.4 pTM=0.401 ipTM=0.301 tol=2.12
2024-12-11 13:44:08,262 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=51.3 pTM=0.406 ipTM=0.324 tol=2.58
2024-12-11 13:44:23,137 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=50.3 pTM=0.399 ipTM=0.28 tol=2.48
2024-12-11 13:44:38,033 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=51.1 pTM=0.405 ipTM=0.286 tol=3.47
2024-12-11 13:44:52,918 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=50 pTM=0.398 ipTM=0.269 tol=2.17
2024-12-11 13:45:07,809 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=51.2 pTM=0.405 ipTM=0.294 tol=1.95
2024-12-11 13:45:22,685 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=49.8 pTM=0.397 ipTM=0.263 tol=2.39
2024-12-11 13:45:37,589 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=51.5 pTM=0.409 ipTM=0.303 tol=2.57
2024-12-11 13:45:52,466 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=50.1 pTM=0.402 ipTM=0.289 tol=3.11
2024-12-11 13:46:07,344 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=50.8 pTM=0.404 ipTM=0.285 tol=2.3
2024-12-11 13:46:22,235 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=49.9 pTM=0.398 ipTM=0.263 tol=2.21
2024-12-11 13:46:37,143 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=51.4 pTM=0.405 ipTM=0.259 tol=3.69
2024-12-11 13:46:52,038 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=49.8 pTM=0.394 ipTM=0.259 tol=3.06
2024-12-11 13:47:06,940 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=50.7 pTM=0.402 ipTM=0.257 tol=3.15
2024-12-11 13:47:21,840 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=49.8 pTM=0.395 ipTM=0.263 tol=3.36
2024-12-11 13:47:21,840 alphafold2_multimer_v3_model_2_seed_000 took 461.4s (30 recycles)
2024-12-11 13:47:37,229 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=48.6 pTM=0.389 ipTM=0.165
2024-12-11 13:47:52,226 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=49 pTM=0.385 ipTM=0.163 tol=15.9
2024-12-11 13:48:07,175 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=48.3 pTM=0.389 ipTM=0.186 tol=14.4
2024-12-11 13:48:22,138 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=47.7 pTM=0.386 ipTM=0.188 tol=6.45
2024-12-11 13:48:37,092 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=47.8 pTM=0.387 ipTM=0.181 tol=5.96
2024-12-11 13:48:52,027 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=47.6 pTM=0.388 ipTM=0.162 tol=4.92
2024-12-11 13:49:06,962 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=48.3 pTM=0.398 ipTM=0.203 tol=4.75
2024-12-11 13:49:21,878 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=48.2 pTM=0.395 ipTM=0.185 tol=4.86
2024-12-11 13:49:36,816 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=48.3 pTM=0.393 ipTM=0.215 tol=4.93
2024-12-11 13:49:51,736 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=48.6 pTM=0.397 ipTM=0.206 tol=3.93
2024-12-11 13:50:06,671 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=48.8 pTM=0.396 ipTM=0.227 tol=3.8
2024-12-11 13:50:21,590 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=47.9 pTM=0.392 ipTM=0.203 tol=3.79
2024-12-11 13:50:36,543 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=48.5 pTM=0.39 ipTM=0.155 tol=6.77
2024-12-11 13:50:51,480 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=48.9 pTM=0.398 ipTM=0.248 tol=6.08
2024-12-11 13:51:06,416 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=47.8 pTM=0.391 ipTM=0.203 tol=3.67
2024-12-11 13:51:21,347 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=48.5 pTM=0.396 ipTM=0.199 tol=3.47
2024-12-11 13:51:36,280 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=48.2 pTM=0.395 ipTM=0.203 tol=4.17
2024-12-11 13:51:51,208 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=48.8 pTM=0.399 ipTM=0.216 tol=3.12
2024-12-11 13:52:06,143 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=47.8 pTM=0.389 ipTM=0.198 tol=10.6
2024-12-11 13:52:21,085 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=48 pTM=0.394 ipTM=0.169 tol=10.9
2024-12-11 13:52:36,024 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=49.6 pTM=0.409 ipTM=0.297 tol=6.91
2024-12-11 13:52:50,943 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=48.5 pTM=0.402 ipTM=0.194 tol=8.84
2024-12-11 13:53:05,859 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=48.5 pTM=0.399 ipTM=0.191 tol=5.59
2024-12-11 13:53:20,749 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=48.6 pTM=0.406 ipTM=0.221 tol=3.13
2024-12-11 13:53:35,644 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=48.4 pTM=0.401 ipTM=0.209 tol=3.28
2024-12-11 13:53:50,540 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=48.9 pTM=0.412 ipTM=0.231 tol=5.24
2024-12-11 13:54:05,432 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=49 pTM=0.408 ipTM=0.225 tol=4.28
2024-12-11 13:54:20,310 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=49.5 pTM=0.42 ipTM=0.257 tol=3.06
2024-12-11 13:54:35,191 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=48.8 pTM=0.406 ipTM=0.209 tol=2.9
2024-12-11 13:54:50,055 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=49.4 pTM=0.419 ipTM=0.251 tol=1.88
2024-12-11 13:55:04,918 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=48.9 pTM=0.408 ipTM=0.219 tol=3.2
2024-12-11 13:55:04,919 alphafold2_multimer_v3_model_3_seed_000 took 462.6s (30 recycles)
2024-12-11 13:55:20,263 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=46.6 pTM=0.396 ipTM=0.248
2024-12-11 13:55:35,204 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=47.2 pTM=0.386 ipTM=0.17 tol=10.8
2024-12-11 13:55:50,144 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=46.4 pTM=0.391 ipTM=0.177 tol=8.46
2024-12-11 13:56:05,073 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=46.6 pTM=0.39 ipTM=0.173 tol=7.38
2024-12-11 13:56:19,976 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=47 pTM=0.395 ipTM=0.221 tol=7.88
2024-12-11 13:56:34,878 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=46.4 pTM=0.387 ipTM=0.208 tol=6.34
2024-12-11 13:56:49,785 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=47.3 pTM=0.395 ipTM=0.214 tol=4.61
2024-12-11 13:57:04,679 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=46.2 pTM=0.387 ipTM=0.178 tol=5.43
2024-12-11 13:57:19,588 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=47.1 pTM=0.388 ipTM=0.17 tol=5.07
2024-12-11 13:57:34,495 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=47.2 pTM=0.387 ipTM=0.165 tol=5.46
2024-12-11 13:57:49,426 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=47.7 pTM=0.39 ipTM=0.181 tol=4.38
2024-12-11 13:58:04,359 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=47.3 pTM=0.379 ipTM=0.176 tol=8.89
2024-12-11 13:58:19,293 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=47.4 pTM=0.386 ipTM=0.188 tol=8.91
2024-12-11 13:58:34,242 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=47.7 pTM=0.384 ipTM=0.167 tol=3.82
2024-12-11 13:58:49,176 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=47.9 pTM=0.391 ipTM=0.167 tol=5.16
2024-12-11 13:59:04,102 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=47.3 pTM=0.384 ipTM=0.169 tol=4.07
2024-12-11 13:59:19,046 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=48.2 pTM=0.39 ipTM=0.165 tol=2.92
2024-12-11 13:59:33,981 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=47.8 pTM=0.393 ipTM=0.164 tol=9.33
2024-12-11 13:59:48,929 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=48 pTM=0.396 ipTM=0.304 tol=10
2024-12-11 14:00:03,859 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=46.6 pTM=0.393 ipTM=0.252 tol=9.71
2024-12-11 14:00:18,812 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=47.7 pTM=0.399 ipTM=0.266 tol=6.15
2024-12-11 14:00:33,756 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=47.7 pTM=0.398 ipTM=0.285 tol=6.07
2024-12-11 14:00:48,713 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=48 pTM=0.404 ipTM=0.343 tol=3.57
2024-12-11 14:01:03,648 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=47.7 pTM=0.402 ipTM=0.318 tol=4.93
2024-12-11 14:01:18,590 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=47.8 pTM=0.409 ipTM=0.382 tol=4.99
2024-12-11 14:01:33,561 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=47.8 pTM=0.409 ipTM=0.37 tol=6.06
2024-12-11 14:01:48,497 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=48.4 pTM=0.417 ipTM=0.399 tol=5.9
2024-12-11 14:02:03,427 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=48.2 pTM=0.414 ipTM=0.369 tol=4.55
2024-12-11 14:02:18,362 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=48.1 pTM=0.41 ipTM=0.379 tol=2.72
2024-12-11 14:02:33,296 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=47.6 pTM=0.405 ipTM=0.358 tol=2.98
2024-12-11 14:02:48,235 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=48.7 pTM=0.417 ipTM=0.416 tol=2.73
2024-12-11 14:02:48,236 alphafold2_multimer_v3_model_4_seed_000 took 462.9s (30 recycles)
2024-12-11 14:03:03,678 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=50.9 pTM=0.408 ipTM=0.459
2024-12-11 14:03:18,615 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=48.1 pTM=0.397 ipTM=0.227 tol=21.2
2024-12-11 14:03:33,536 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=47.8 pTM=0.396 ipTM=0.244 tol=12.4
2024-12-11 14:03:48,443 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=47.2 pTM=0.385 ipTM=0.191 tol=6.43
2024-12-11 14:04:03,346 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=48.2 pTM=0.393 ipTM=0.213 tol=5.54
2024-12-11 14:04:18,236 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=47.7 pTM=0.393 ipTM=0.191 tol=6.32
2024-12-11 14:04:33,157 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=48.4 pTM=0.395 ipTM=0.243 tol=7.32
2024-12-11 14:04:48,062 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=47.2 pTM=0.389 ipTM=0.188 tol=4.53
2024-12-11 14:05:02,983 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=48.3 pTM=0.396 ipTM=0.214 tol=4.41
2024-12-11 14:05:17,882 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=47.6 pTM=0.389 ipTM=0.191 tol=3.07
2024-12-11 14:05:32,811 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=48.8 pTM=0.399 ipTM=0.264 tol=4.62
2024-12-11 14:05:47,714 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=47.3 pTM=0.387 ipTM=0.182 tol=4.62
2024-12-11 14:06:02,652 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=48.3 pTM=0.391 ipTM=0.148 tol=3.69
2024-12-11 14:06:17,543 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=47.7 pTM=0.389 ipTM=0.197 tol=3.43
2024-12-11 14:06:32,452 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=48.2 pTM=0.389 ipTM=0.204 tol=3.88
2024-12-11 14:06:47,348 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=47.2 pTM=0.386 ipTM=0.181 tol=2.97
2024-12-11 14:07:02,280 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=48.7 pTM=0.398 ipTM=0.187 tol=4.53
2024-12-11 14:07:17,168 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=47.8 pTM=0.393 ipTM=0.194 tol=2.94
2024-12-11 14:07:32,068 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=48 pTM=0.388 ipTM=0.198 tol=3.1
2024-12-11 14:07:46,938 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=46.9 pTM=0.385 ipTM=0.182 tol=4.42
2024-12-11 14:08:01,834 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=48.8 pTM=0.396 ipTM=0.197 tol=4.46
2024-12-11 14:08:16,705 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=47.3 pTM=0.389 ipTM=0.184 tol=2.69
2024-12-11 14:08:31,596 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=48.4 pTM=0.394 ipTM=0.222 tol=4.21
2024-12-11 14:08:46,462 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=47.1 pTM=0.385 ipTM=0.179 tol=4.25
2024-12-11 14:09:01,357 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=48 pTM=0.392 ipTM=0.164 tol=4
2024-12-11 14:09:16,231 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=47.9 pTM=0.391 ipTM=0.193 tol=4.03
2024-12-11 14:09:31,109 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=48.1 pTM=0.39 ipTM=0.203 tol=4.6
2024-12-11 14:09:45,972 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=47.4 pTM=0.387 ipTM=0.188 tol=4.44
2024-12-11 14:10:00,897 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=48.6 pTM=0.392 ipTM=0.196 tol=6.81
2024-12-11 14:10:15,776 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=47.4 pTM=0.385 ipTM=0.182 tol=3.96
2024-12-11 14:10:30,687 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=48.9 pTM=0.397 ipTM=0.239 tol=7.11
2024-12-11 14:10:30,688 alphafold2_multimer_v3_model_5_seed_000 took 462.0s (30 recycles)
2024-12-11 14:10:31,129 reranking models by 'multimer' metric
2024-12-11 14:10:31,931 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-11 14:11:39,197 Relaxation took 68.1s
2024-12-11 14:11:39,197 rank_001_alphafold2_multimer_v3_model_1_seed_000 pLDDT=49.7 pTM=0.416 ipTM=0.416
2024-12-11 14:12:32,362 Relaxation took 53.2s
2024-12-11 14:12:32,362 rank_002_alphafold2_multimer_v3_model_4_seed_000 pLDDT=48.7 pTM=0.417 ipTM=0.416
2024-12-11 14:13:41,116 Relaxation took 68.8s
2024-12-11 14:13:41,117 rank_003_alphafold2_multimer_v3_model_2_seed_000 pLDDT=49.8 pTM=0.395 ipTM=0.263
2024-12-11 14:14:45,135 Relaxation took 64.0s
2024-12-11 14:14:45,136 rank_004_alphafold2_multimer_v3_model_5_seed_000 pLDDT=48.9 pTM=0.397 ipTM=0.239
2024-12-11 14:15:46,327 Relaxation took 61.2s
2024-12-11 14:15:46,327 rank_005_alphafold2_multimer_v3_model_3_seed_000 pLDDT=48.9 pTM=0.408 ipTM=0.219
2024-12-11 14:15:47,760 Done