2024-12-08 10:52:06,979 Running colabfold 1.5.5 (a69c85fb950bb5a8936e440e12bdb7d2f358d2e3)
2024-12-08 10:52:07,267 Running on GPU
2024-12-08 10:52:08,302 Found 6 citations for tools or databases
2024-12-08 10:52:08,302 Query 1/1: SH3RF3_YWHAB (length 1128)
2024-12-08 10:52:08,563 Sleeping for 10s. Reason: PENDING
2024-12-08 10:52:18,823 Sleeping for 6s. Reason: RUNNING
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2024-12-08 10:53:14,646 Sleeping for 10s. Reason: RUNNING
2024-12-08 10:53:24,914 Sleeping for 5s. Reason: RUNNING
2024-12-08 10:53:30,170 Sleeping for 5s. Reason: RUNNING
2024-12-08 10:53:35,427 Sleeping for 5s. Reason: RUNNING
2024-12-08 10:53:40,680 Sleeping for 6s. Reason: RUNNING
2024-12-08 10:53:46,933 Sleeping for 10s. Reason: RUNNING
2024-12-08 10:53:57,196 Sleeping for 7s. Reason: RUNNING
2024-12-08 10:54:04,451 Sleeping for 8s. Reason: RUNNING
2024-12-08 10:54:12,711 Sleeping for 6s. Reason: RUNNING
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2024-12-08 10:54:54,253 Sleeping for 10s. Reason: RUNNING
2024-12-08 10:55:06,359 Sleeping for 7s. Reason: PENDING
2024-12-08 10:55:13,611 Sleeping for 9s. Reason: RUNNING
2024-12-08 10:55:22,870 Sleeping for 6s. Reason: RUNNING
2024-12-08 10:55:29,127 Sleeping for 10s. Reason: RUNNING
2024-12-08 10:55:39,384 Sleeping for 5s. Reason: RUNNING
2024-12-08 10:55:44,635 Sleeping for 7s. Reason: RUNNING
2024-12-08 10:55:51,889 Sleeping for 8s. Reason: RUNNING
2024-12-08 10:56:00,145 Sleeping for 10s. Reason: RUNNING
2024-12-08 10:56:10,407 Sleeping for 7s. Reason: RUNNING
2024-12-08 10:56:17,667 Sleeping for 10s. Reason: RUNNING
2024-12-08 10:56:27,926 Sleeping for 6s. Reason: RUNNING
2024-12-08 10:56:40,126 Setting max_seq=508, max_extra_seq=2048
2024-12-08 10:58:59,044 alphafold2_multimer_v3_model_1_seed_000 recycle=0 pLDDT=45.8 pTM=0.375 ipTM=0.716
2024-12-08 10:59:25,472 alphafold2_multimer_v3_model_1_seed_000 recycle=1 pLDDT=46.5 pTM=0.349 ipTM=0.839 tol=16.7
2024-12-08 10:59:52,075 alphafold2_multimer_v3_model_1_seed_000 recycle=2 pLDDT=47.4 pTM=0.339 ipTM=0.808 tol=16.5
2024-12-08 11:00:18,798 alphafold2_multimer_v3_model_1_seed_000 recycle=3 pLDDT=47.7 pTM=0.341 ipTM=0.792 tol=9.26
2024-12-08 11:00:45,542 alphafold2_multimer_v3_model_1_seed_000 recycle=4 pLDDT=48 pTM=0.338 ipTM=0.799 tol=8.89
2024-12-08 11:01:12,288 alphafold2_multimer_v3_model_1_seed_000 recycle=5 pLDDT=47.3 pTM=0.345 ipTM=0.799 tol=10.2
2024-12-08 11:01:39,058 alphafold2_multimer_v3_model_1_seed_000 recycle=6 pLDDT=47.8 pTM=0.336 ipTM=0.785 tol=9.11
2024-12-08 11:02:05,815 alphafold2_multimer_v3_model_1_seed_000 recycle=7 pLDDT=47.6 pTM=0.339 ipTM=0.798 tol=4.89
2024-12-08 11:02:32,551 alphafold2_multimer_v3_model_1_seed_000 recycle=8 pLDDT=47.6 pTM=0.337 ipTM=0.799 tol=3.85
2024-12-08 11:02:59,341 alphafold2_multimer_v3_model_1_seed_000 recycle=9 pLDDT=47.9 pTM=0.344 ipTM=0.809 tol=4.26
2024-12-08 11:03:26,138 alphafold2_multimer_v3_model_1_seed_000 recycle=10 pLDDT=47.7 pTM=0.338 ipTM=0.802 tol=5.08
2024-12-08 11:03:52,939 alphafold2_multimer_v3_model_1_seed_000 recycle=11 pLDDT=47.7 pTM=0.345 ipTM=0.81 tol=4.54
2024-12-08 11:04:19,725 alphafold2_multimer_v3_model_1_seed_000 recycle=12 pLDDT=47.8 pTM=0.339 ipTM=0.797 tol=3.46
2024-12-08 11:04:46,496 alphafold2_multimer_v3_model_1_seed_000 recycle=13 pLDDT=47.7 pTM=0.34 ipTM=0.801 tol=4.49
2024-12-08 11:05:13,260 alphafold2_multimer_v3_model_1_seed_000 recycle=14 pLDDT=47.6 pTM=0.34 ipTM=0.795 tol=3.3
2024-12-08 11:05:40,025 alphafold2_multimer_v3_model_1_seed_000 recycle=15 pLDDT=47.5 pTM=0.344 ipTM=0.795 tol=3
2024-12-08 11:06:06,797 alphafold2_multimer_v3_model_1_seed_000 recycle=16 pLDDT=47.6 pTM=0.341 ipTM=0.791 tol=5.64
2024-12-08 11:06:33,528 alphafold2_multimer_v3_model_1_seed_000 recycle=17 pLDDT=47.7 pTM=0.342 ipTM=0.812 tol=5.48
2024-12-08 11:07:00,288 alphafold2_multimer_v3_model_1_seed_000 recycle=18 pLDDT=47.7 pTM=0.34 ipTM=0.801 tol=2.88
2024-12-08 11:07:27,057 alphafold2_multimer_v3_model_1_seed_000 recycle=19 pLDDT=47.7 pTM=0.346 ipTM=0.812 tol=4.86
2024-12-08 11:07:53,791 alphafold2_multimer_v3_model_1_seed_000 recycle=20 pLDDT=47 pTM=0.34 ipTM=0.801 tol=4.58
2024-12-08 11:08:20,561 alphafold2_multimer_v3_model_1_seed_000 recycle=21 pLDDT=47.6 pTM=0.347 ipTM=0.797 tol=5.53
2024-12-08 11:08:47,314 alphafold2_multimer_v3_model_1_seed_000 recycle=22 pLDDT=47.4 pTM=0.339 ipTM=0.8 tol=5.18
2024-12-08 11:09:14,063 alphafold2_multimer_v3_model_1_seed_000 recycle=23 pLDDT=47.7 pTM=0.344 ipTM=0.788 tol=3.92
2024-12-08 11:09:40,839 alphafold2_multimer_v3_model_1_seed_000 recycle=24 pLDDT=47.7 pTM=0.341 ipTM=0.805 tol=3.13
2024-12-08 11:10:07,566 alphafold2_multimer_v3_model_1_seed_000 recycle=25 pLDDT=47.7 pTM=0.348 ipTM=0.815 tol=3.97
2024-12-08 11:10:34,324 alphafold2_multimer_v3_model_1_seed_000 recycle=26 pLDDT=47.8 pTM=0.342 ipTM=0.806 tol=2.97
2024-12-08 11:11:01,060 alphafold2_multimer_v3_model_1_seed_000 recycle=27 pLDDT=47.4 pTM=0.343 ipTM=0.796 tol=2.88
2024-12-08 11:11:27,824 alphafold2_multimer_v3_model_1_seed_000 recycle=28 pLDDT=47.9 pTM=0.343 ipTM=0.804 tol=2.38
2024-12-08 11:11:54,555 alphafold2_multimer_v3_model_1_seed_000 recycle=29 pLDDT=47.6 pTM=0.348 ipTM=0.8 tol=3.57
2024-12-08 11:12:21,290 alphafold2_multimer_v3_model_1_seed_000 recycle=30 pLDDT=47.7 pTM=0.344 ipTM=0.797 tol=3.24
2024-12-08 11:12:21,291 alphafold2_multimer_v3_model_1_seed_000 took 936.4s (30 recycles)
2024-12-08 11:12:48,828 alphafold2_multimer_v3_model_2_seed_000 recycle=0 pLDDT=47.6 pTM=0.359 ipTM=0.474
2024-12-08 11:13:15,628 alphafold2_multimer_v3_model_2_seed_000 recycle=1 pLDDT=48.2 pTM=0.337 ipTM=0.866 tol=15.2
2024-12-08 11:13:42,508 alphafold2_multimer_v3_model_2_seed_000 recycle=2 pLDDT=49.6 pTM=0.33 ipTM=0.858 tol=19.3
2024-12-08 11:14:09,377 alphafold2_multimer_v3_model_2_seed_000 recycle=3 pLDDT=50.4 pTM=0.333 ipTM=0.84 tol=14.1
2024-12-08 11:14:36,253 alphafold2_multimer_v3_model_2_seed_000 recycle=4 pLDDT=50.4 pTM=0.334 ipTM=0.856 tol=13.3
2024-12-08 11:15:03,140 alphafold2_multimer_v3_model_2_seed_000 recycle=5 pLDDT=50.6 pTM=0.333 ipTM=0.854 tol=7.46
2024-12-08 11:15:29,993 alphafold2_multimer_v3_model_2_seed_000 recycle=6 pLDDT=50.6 pTM=0.334 ipTM=0.856 tol=5.71
2024-12-08 11:15:56,867 alphafold2_multimer_v3_model_2_seed_000 recycle=7 pLDDT=50.7 pTM=0.333 ipTM=0.852 tol=5.72
2024-12-08 11:16:23,738 alphafold2_multimer_v3_model_2_seed_000 recycle=8 pLDDT=50.9 pTM=0.336 ipTM=0.863 tol=3.42
2024-12-08 11:16:50,603 alphafold2_multimer_v3_model_2_seed_000 recycle=9 pLDDT=50.7 pTM=0.335 ipTM=0.853 tol=5.02
2024-12-08 11:17:17,460 alphafold2_multimer_v3_model_2_seed_000 recycle=10 pLDDT=50.9 pTM=0.336 ipTM=0.86 tol=3.37
2024-12-08 11:17:44,344 alphafold2_multimer_v3_model_2_seed_000 recycle=11 pLDDT=50.5 pTM=0.335 ipTM=0.862 tol=3.24
2024-12-08 11:18:11,242 alphafold2_multimer_v3_model_2_seed_000 recycle=12 pLDDT=50.8 pTM=0.336 ipTM=0.863 tol=2.96
2024-12-08 11:18:38,101 alphafold2_multimer_v3_model_2_seed_000 recycle=13 pLDDT=50.7 pTM=0.335 ipTM=0.864 tol=3.01
2024-12-08 11:19:04,979 alphafold2_multimer_v3_model_2_seed_000 recycle=14 pLDDT=50.4 pTM=0.335 ipTM=0.851 tol=3.47
2024-12-08 11:19:31,861 alphafold2_multimer_v3_model_2_seed_000 recycle=15 pLDDT=50.3 pTM=0.335 ipTM=0.856 tol=3.37
2024-12-08 11:19:58,743 alphafold2_multimer_v3_model_2_seed_000 recycle=16 pLDDT=50.4 pTM=0.336 ipTM=0.856 tol=4.66
2024-12-08 11:20:25,603 alphafold2_multimer_v3_model_2_seed_000 recycle=17 pLDDT=50.9 pTM=0.337 ipTM=0.854 tol=4.3
2024-12-08 11:20:52,509 alphafold2_multimer_v3_model_2_seed_000 recycle=18 pLDDT=50.8 pTM=0.334 ipTM=0.854 tol=3.95
2024-12-08 11:21:19,378 alphafold2_multimer_v3_model_2_seed_000 recycle=19 pLDDT=50.5 pTM=0.336 ipTM=0.861 tol=3.32
2024-12-08 11:21:46,254 alphafold2_multimer_v3_model_2_seed_000 recycle=20 pLDDT=50.6 pTM=0.335 ipTM=0.852 tol=3.44
2024-12-08 11:22:13,143 alphafold2_multimer_v3_model_2_seed_000 recycle=21 pLDDT=50.5 pTM=0.335 ipTM=0.844 tol=2.91
2024-12-08 11:22:40,022 alphafold2_multimer_v3_model_2_seed_000 recycle=22 pLDDT=50.5 pTM=0.336 ipTM=0.858 tol=2.79
2024-12-08 11:23:06,884 alphafold2_multimer_v3_model_2_seed_000 recycle=23 pLDDT=50.5 pTM=0.335 ipTM=0.843 tol=3.99
2024-12-08 11:23:33,793 alphafold2_multimer_v3_model_2_seed_000 recycle=24 pLDDT=50.3 pTM=0.336 ipTM=0.851 tol=2.96
2024-12-08 11:24:00,670 alphafold2_multimer_v3_model_2_seed_000 recycle=25 pLDDT=50.5 pTM=0.336 ipTM=0.851 tol=2.77
2024-12-08 11:24:27,558 alphafold2_multimer_v3_model_2_seed_000 recycle=26 pLDDT=50.7 pTM=0.335 ipTM=0.855 tol=3.08
2024-12-08 11:24:54,426 alphafold2_multimer_v3_model_2_seed_000 recycle=27 pLDDT=50.4 pTM=0.336 ipTM=0.854 tol=3.28
2024-12-08 11:25:21,307 alphafold2_multimer_v3_model_2_seed_000 recycle=28 pLDDT=50.8 pTM=0.336 ipTM=0.858 tol=2.87
2024-12-08 11:25:48,170 alphafold2_multimer_v3_model_2_seed_000 recycle=29 pLDDT=50.7 pTM=0.336 ipTM=0.856 tol=2.62
2024-12-08 11:26:15,033 alphafold2_multimer_v3_model_2_seed_000 recycle=30 pLDDT=50.6 pTM=0.335 ipTM=0.855 tol=2.33
2024-12-08 11:26:15,034 alphafold2_multimer_v3_model_2_seed_000 took 833.0s (30 recycles)
2024-12-08 11:26:42,709 alphafold2_multimer_v3_model_3_seed_000 recycle=0 pLDDT=46.4 pTM=0.326 ipTM=0.242
2024-12-08 11:27:09,624 alphafold2_multimer_v3_model_3_seed_000 recycle=1 pLDDT=47.5 pTM=0.336 ipTM=0.378 tol=20.7
2024-12-08 11:27:36,548 alphafold2_multimer_v3_model_3_seed_000 recycle=2 pLDDT=49.6 pTM=0.346 ipTM=0.816 tol=20.8
2024-12-08 11:28:03,474 alphafold2_multimer_v3_model_3_seed_000 recycle=3 pLDDT=49.9 pTM=0.347 ipTM=0.732 tol=9.74
2024-12-08 11:28:30,443 alphafold2_multimer_v3_model_3_seed_000 recycle=4 pLDDT=50 pTM=0.34 ipTM=0.781 tol=8.2
2024-12-08 11:28:57,405 alphafold2_multimer_v3_model_3_seed_000 recycle=5 pLDDT=49.8 pTM=0.34 ipTM=0.755 tol=4.14
2024-12-08 11:29:24,366 alphafold2_multimer_v3_model_3_seed_000 recycle=6 pLDDT=49.5 pTM=0.337 ipTM=0.768 tol=12.5
2024-12-08 11:29:51,330 alphafold2_multimer_v3_model_3_seed_000 recycle=7 pLDDT=49.6 pTM=0.335 ipTM=0.743 tol=9.03
2024-12-08 11:30:18,312 alphafold2_multimer_v3_model_3_seed_000 recycle=8 pLDDT=49.7 pTM=0.338 ipTM=0.775 tol=9.07
2024-12-08 11:30:45,316 alphafold2_multimer_v3_model_3_seed_000 recycle=9 pLDDT=49.6 pTM=0.336 ipTM=0.761 tol=3.89
2024-12-08 11:31:12,281 alphafold2_multimer_v3_model_3_seed_000 recycle=10 pLDDT=49.5 pTM=0.34 ipTM=0.757 tol=4.18
2024-12-08 11:31:39,249 alphafold2_multimer_v3_model_3_seed_000 recycle=11 pLDDT=49.6 pTM=0.342 ipTM=0.778 tol=6.83
2024-12-08 11:32:06,197 alphafold2_multimer_v3_model_3_seed_000 recycle=12 pLDDT=49.5 pTM=0.341 ipTM=0.792 tol=3.41
2024-12-08 11:32:33,163 alphafold2_multimer_v3_model_3_seed_000 recycle=13 pLDDT=49.8 pTM=0.341 ipTM=0.785 tol=3.31
2024-12-08 11:33:00,140 alphafold2_multimer_v3_model_3_seed_000 recycle=14 pLDDT=49.4 pTM=0.341 ipTM=0.794 tol=3.52
2024-12-08 11:33:27,106 alphafold2_multimer_v3_model_3_seed_000 recycle=15 pLDDT=49.5 pTM=0.341 ipTM=0.796 tol=3.24
2024-12-08 11:33:54,068 alphafold2_multimer_v3_model_3_seed_000 recycle=16 pLDDT=49.6 pTM=0.341 ipTM=0.793 tol=2.98
2024-12-08 11:34:21,033 alphafold2_multimer_v3_model_3_seed_000 recycle=17 pLDDT=50 pTM=0.341 ipTM=0.799 tol=2.16
2024-12-08 11:34:47,990 alphafold2_multimer_v3_model_3_seed_000 recycle=18 pLDDT=49.7 pTM=0.341 ipTM=0.791 tol=2.56
2024-12-08 11:35:14,999 alphafold2_multimer_v3_model_3_seed_000 recycle=19 pLDDT=49.8 pTM=0.341 ipTM=0.819 tol=6.69
2024-12-08 11:35:41,970 alphafold2_multimer_v3_model_3_seed_000 recycle=20 pLDDT=49.4 pTM=0.342 ipTM=0.787 tol=6.98
2024-12-08 11:36:08,967 alphafold2_multimer_v3_model_3_seed_000 recycle=21 pLDDT=49.6 pTM=0.339 ipTM=0.801 tol=2.94
2024-12-08 11:36:35,929 alphafold2_multimer_v3_model_3_seed_000 recycle=22 pLDDT=49.5 pTM=0.341 ipTM=0.803 tol=3.17
2024-12-08 11:37:02,905 alphafold2_multimer_v3_model_3_seed_000 recycle=23 pLDDT=49.7 pTM=0.339 ipTM=0.799 tol=2.81
2024-12-08 11:37:29,863 alphafold2_multimer_v3_model_3_seed_000 recycle=24 pLDDT=49.3 pTM=0.34 ipTM=0.814 tol=7.47
2024-12-08 11:37:56,845 alphafold2_multimer_v3_model_3_seed_000 recycle=25 pLDDT=49.6 pTM=0.339 ipTM=0.817 tol=7.37
2024-12-08 11:38:23,788 alphafold2_multimer_v3_model_3_seed_000 recycle=26 pLDDT=49.5 pTM=0.34 ipTM=0.805 tol=2.9
2024-12-08 11:38:50,772 alphafold2_multimer_v3_model_3_seed_000 recycle=27 pLDDT=49.4 pTM=0.34 ipTM=0.82 tol=2.77
2024-12-08 11:39:17,752 alphafold2_multimer_v3_model_3_seed_000 recycle=28 pLDDT=49.7 pTM=0.342 ipTM=0.796 tol=2.3
2024-12-08 11:39:44,732 alphafold2_multimer_v3_model_3_seed_000 recycle=29 pLDDT=49.6 pTM=0.343 ipTM=0.811 tol=2.54
2024-12-08 11:40:11,689 alphafold2_multimer_v3_model_3_seed_000 recycle=30 pLDDT=49.4 pTM=0.341 ipTM=0.803 tol=2.14
2024-12-08 11:40:11,690 alphafold2_multimer_v3_model_3_seed_000 took 835.9s (30 recycles)
2024-12-08 11:40:39,286 alphafold2_multimer_v3_model_4_seed_000 recycle=0 pLDDT=43.5 pTM=0.339 ipTM=0.318
2024-12-08 11:41:06,189 alphafold2_multimer_v3_model_4_seed_000 recycle=1 pLDDT=44.9 pTM=0.325 ipTM=0.255 tol=19.3
2024-12-08 11:41:33,067 alphafold2_multimer_v3_model_4_seed_000 recycle=2 pLDDT=45.5 pTM=0.335 ipTM=0.697 tol=12.7
2024-12-08 11:41:59,986 alphafold2_multimer_v3_model_4_seed_000 recycle=3 pLDDT=46.6 pTM=0.33 ipTM=0.777 tol=11.2
2024-12-08 11:42:26,880 alphafold2_multimer_v3_model_4_seed_000 recycle=4 pLDDT=46.1 pTM=0.343 ipTM=0.769 tol=8.45
2024-12-08 11:42:53,796 alphafold2_multimer_v3_model_4_seed_000 recycle=5 pLDDT=46.8 pTM=0.333 ipTM=0.761 tol=5.88
2024-12-08 11:43:20,698 alphafold2_multimer_v3_model_4_seed_000 recycle=6 pLDDT=46.6 pTM=0.331 ipTM=0.756 tol=4.64
2024-12-08 11:43:47,609 alphafold2_multimer_v3_model_4_seed_000 recycle=7 pLDDT=45.9 pTM=0.331 ipTM=0.736 tol=13
2024-12-08 11:44:14,526 alphafold2_multimer_v3_model_4_seed_000 recycle=8 pLDDT=46.2 pTM=0.33 ipTM=0.741 tol=9.49
2024-12-08 11:44:41,410 alphafold2_multimer_v3_model_4_seed_000 recycle=9 pLDDT=46.1 pTM=0.346 ipTM=0.748 tol=11.2
2024-12-08 11:45:08,314 alphafold2_multimer_v3_model_4_seed_000 recycle=10 pLDDT=46.6 pTM=0.331 ipTM=0.736 tol=10.1
2024-12-08 11:45:35,267 alphafold2_multimer_v3_model_4_seed_000 recycle=11 pLDDT=46.3 pTM=0.335 ipTM=0.765 tol=13.5
2024-12-08 11:46:02,202 alphafold2_multimer_v3_model_4_seed_000 recycle=12 pLDDT=46.4 pTM=0.336 ipTM=0.741 tol=11.3
2024-12-08 11:46:29,142 alphafold2_multimer_v3_model_4_seed_000 recycle=13 pLDDT=46.4 pTM=0.333 ipTM=0.741 tol=7.77
2024-12-08 11:46:56,060 alphafold2_multimer_v3_model_4_seed_000 recycle=14 pLDDT=46.3 pTM=0.333 ipTM=0.735 tol=8.38
2024-12-08 11:47:23,006 alphafold2_multimer_v3_model_4_seed_000 recycle=15 pLDDT=46.1 pTM=0.336 ipTM=0.759 tol=7.74
2024-12-08 11:47:49,913 alphafold2_multimer_v3_model_4_seed_000 recycle=16 pLDDT=46.6 pTM=0.334 ipTM=0.741 tol=15
2024-12-08 11:48:16,816 alphafold2_multimer_v3_model_4_seed_000 recycle=17 pLDDT=46.6 pTM=0.334 ipTM=0.762 tol=12.4
2024-12-08 11:48:43,766 alphafold2_multimer_v3_model_4_seed_000 recycle=18 pLDDT=47.1 pTM=0.332 ipTM=0.756 tol=13.7
2024-12-08 11:49:10,688 alphafold2_multimer_v3_model_4_seed_000 recycle=19 pLDDT=46.5 pTM=0.336 ipTM=0.785 tol=14.6
2024-12-08 11:49:37,584 alphafold2_multimer_v3_model_4_seed_000 recycle=20 pLDDT=46.6 pTM=0.337 ipTM=0.771 tol=6.62
2024-12-08 11:50:04,496 alphafold2_multimer_v3_model_4_seed_000 recycle=21 pLDDT=46.3 pTM=0.335 ipTM=0.769 tol=12.1
2024-12-08 11:50:31,385 alphafold2_multimer_v3_model_4_seed_000 recycle=22 pLDDT=46.7 pTM=0.336 ipTM=0.775 tol=11.4
2024-12-08 11:50:58,297 alphafold2_multimer_v3_model_4_seed_000 recycle=23 pLDDT=46.6 pTM=0.335 ipTM=0.756 tol=8.19
2024-12-08 11:51:25,206 alphafold2_multimer_v3_model_4_seed_000 recycle=24 pLDDT=46.6 pTM=0.336 ipTM=0.761 tol=9.18
2024-12-08 11:51:52,108 alphafold2_multimer_v3_model_4_seed_000 recycle=25 pLDDT=46.6 pTM=0.333 ipTM=0.759 tol=10.2
2024-12-08 11:52:19,017 alphafold2_multimer_v3_model_4_seed_000 recycle=26 pLDDT=46.7 pTM=0.333 ipTM=0.75 tol=10.6
2024-12-08 11:52:45,937 alphafold2_multimer_v3_model_4_seed_000 recycle=27 pLDDT=46 pTM=0.337 ipTM=0.757 tol=6.06
2024-12-08 11:53:12,848 alphafold2_multimer_v3_model_4_seed_000 recycle=28 pLDDT=46.7 pTM=0.332 ipTM=0.742 tol=4.69
2024-12-08 11:53:39,736 alphafold2_multimer_v3_model_4_seed_000 recycle=29 pLDDT=46.2 pTM=0.337 ipTM=0.769 tol=5.77
2024-12-08 11:54:06,625 alphafold2_multimer_v3_model_4_seed_000 recycle=30 pLDDT=46.6 pTM=0.333 ipTM=0.742 tol=13.7
2024-12-08 11:54:06,626 alphafold2_multimer_v3_model_4_seed_000 took 834.2s (30 recycles)
2024-12-08 11:54:34,349 alphafold2_multimer_v3_model_5_seed_000 recycle=0 pLDDT=45.8 pTM=0.335 ipTM=0.404
2024-12-08 11:55:01,306 alphafold2_multimer_v3_model_5_seed_000 recycle=1 pLDDT=47.1 pTM=0.367 ipTM=0.791 tol=22.3
2024-12-08 11:55:28,333 alphafold2_multimer_v3_model_5_seed_000 recycle=2 pLDDT=48.5 pTM=0.34 ipTM=0.793 tol=18.3
2024-12-08 11:55:55,351 alphafold2_multimer_v3_model_5_seed_000 recycle=3 pLDDT=48.3 pTM=0.339 ipTM=0.777 tol=13.4
2024-12-08 11:56:22,360 alphafold2_multimer_v3_model_5_seed_000 recycle=4 pLDDT=48.9 pTM=0.326 ipTM=0.784 tol=15.9
2024-12-08 11:56:49,392 alphafold2_multimer_v3_model_5_seed_000 recycle=5 pLDDT=49.6 pTM=0.33 ipTM=0.8 tol=17.9
2024-12-08 11:57:16,405 alphafold2_multimer_v3_model_5_seed_000 recycle=6 pLDDT=49.2 pTM=0.332 ipTM=0.791 tol=13.8
2024-12-08 11:57:43,412 alphafold2_multimer_v3_model_5_seed_000 recycle=7 pLDDT=49.3 pTM=0.33 ipTM=0.793 tol=16.1
2024-12-08 11:58:10,443 alphafold2_multimer_v3_model_5_seed_000 recycle=8 pLDDT=49.2 pTM=0.33 ipTM=0.785 tol=16.8
2024-12-08 11:58:37,505 alphafold2_multimer_v3_model_5_seed_000 recycle=9 pLDDT=49.4 pTM=0.329 ipTM=0.786 tol=12.9
2024-12-08 11:59:04,562 alphafold2_multimer_v3_model_5_seed_000 recycle=10 pLDDT=49.2 pTM=0.33 ipTM=0.799 tol=5.33
2024-12-08 11:59:31,623 alphafold2_multimer_v3_model_5_seed_000 recycle=11 pLDDT=49.3 pTM=0.329 ipTM=0.798 tol=6.8
2024-12-08 11:59:58,689 alphafold2_multimer_v3_model_5_seed_000 recycle=12 pLDDT=49.2 pTM=0.332 ipTM=0.787 tol=17
2024-12-08 12:00:25,713 alphafold2_multimer_v3_model_5_seed_000 recycle=13 pLDDT=49.4 pTM=0.329 ipTM=0.783 tol=12.4
2024-12-08 12:00:52,766 alphafold2_multimer_v3_model_5_seed_000 recycle=14 pLDDT=49.1 pTM=0.331 ipTM=0.783 tol=11.2
2024-12-08 12:01:19,825 alphafold2_multimer_v3_model_5_seed_000 recycle=15 pLDDT=49.2 pTM=0.329 ipTM=0.79 tol=8.81
2024-12-08 12:01:46,865 alphafold2_multimer_v3_model_5_seed_000 recycle=16 pLDDT=49 pTM=0.332 ipTM=0.792 tol=6.23
2024-12-08 12:02:13,888 alphafold2_multimer_v3_model_5_seed_000 recycle=17 pLDDT=49.5 pTM=0.329 ipTM=0.781 tol=5.48
2024-12-08 12:02:40,922 alphafold2_multimer_v3_model_5_seed_000 recycle=18 pLDDT=49.2 pTM=0.329 ipTM=0.794 tol=15.7
2024-12-08 12:03:07,939 alphafold2_multimer_v3_model_5_seed_000 recycle=19 pLDDT=49.2 pTM=0.33 ipTM=0.786 tol=7.92
2024-12-08 12:03:34,939 alphafold2_multimer_v3_model_5_seed_000 recycle=20 pLDDT=49.1 pTM=0.329 ipTM=0.786 tol=12.4
2024-12-08 12:04:01,915 alphafold2_multimer_v3_model_5_seed_000 recycle=21 pLDDT=48.9 pTM=0.33 ipTM=0.765 tol=6.86
2024-12-08 12:04:28,931 alphafold2_multimer_v3_model_5_seed_000 recycle=22 pLDDT=49.1 pTM=0.329 ipTM=0.796 tol=12.9
2024-12-08 12:04:55,991 alphafold2_multimer_v3_model_5_seed_000 recycle=23 pLDDT=49.2 pTM=0.328 ipTM=0.765 tol=11.1
2024-12-08 12:05:23,057 alphafold2_multimer_v3_model_5_seed_000 recycle=24 pLDDT=49.1 pTM=0.329 ipTM=0.803 tol=9.45
2024-12-08 12:05:50,104 alphafold2_multimer_v3_model_5_seed_000 recycle=25 pLDDT=49.3 pTM=0.329 ipTM=0.789 tol=12.4
2024-12-08 12:06:17,155 alphafold2_multimer_v3_model_5_seed_000 recycle=26 pLDDT=49.2 pTM=0.328 ipTM=0.779 tol=10.6
2024-12-08 12:06:44,183 alphafold2_multimer_v3_model_5_seed_000 recycle=27 pLDDT=48.9 pTM=0.33 ipTM=0.792 tol=14.6
2024-12-08 12:07:11,234 alphafold2_multimer_v3_model_5_seed_000 recycle=28 pLDDT=49.1 pTM=0.329 ipTM=0.784 tol=9.44
2024-12-08 12:07:38,241 alphafold2_multimer_v3_model_5_seed_000 recycle=29 pLDDT=49 pTM=0.329 ipTM=0.79 tol=8.23
2024-12-08 12:08:05,271 alphafold2_multimer_v3_model_5_seed_000 recycle=30 pLDDT=49.1 pTM=0.328 ipTM=0.803 tol=4.71
2024-12-08 12:08:05,272 alphafold2_multimer_v3_model_5_seed_000 took 837.9s (30 recycles)
2024-12-08 12:08:06,055 reranking models by 'multimer' metric
2024-12-08 12:08:09,424 Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
2024-12-08 12:09:28,901 Relaxation took 82.8s
2024-12-08 12:09:28,901 rank_001_alphafold2_multimer_v3_model_2_seed_000 pLDDT=50.6 pTM=0.335 ipTM=0.855
2024-12-08 12:10:45,930 Relaxation took 77.0s
2024-12-08 12:10:45,930 rank_002_alphafold2_multimer_v3_model_3_seed_000 pLDDT=49.4 pTM=0.341 ipTM=0.803
2024-12-08 12:12:31,302 Relaxation took 105.4s
2024-12-08 12:12:31,303 rank_003_alphafold2_multimer_v3_model_5_seed_000 pLDDT=49.1 pTM=0.328 ipTM=0.803
2024-12-08 12:14:07,064 Relaxation took 95.8s
2024-12-08 12:14:07,064 rank_004_alphafold2_multimer_v3_model_1_seed_000 pLDDT=47.7 pTM=0.344 ipTM=0.797
2024-12-08 12:15:58,292 Relaxation took 111.2s
2024-12-08 12:15:58,293 rank_005_alphafold2_multimer_v3_model_4_seed_000 pLDDT=46.6 pTM=0.333 ipTM=0.742
2024-12-08 12:16:00,396 Done